1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Kurita, J.
Shimahara, H.
Yoshida, M.
Tate, S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
N
N
159
S
C
N
160
N
C
N
161
N
O
N
162
N
C
N
163
N
C
N
164
N
C
N
165
N
C
N
166
N
N
N
167
N
O
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
S
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
N
N
204
S
C
N
205
N
C
N
206
N
O
N
207
N
C
Y
208
N
C
Y
209
N
C
Y
210
N
C
Y
211
N
C
Y
212
N
C
Y
213
N
C
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
N
N
227
S
C
N
228
N
C
N
229
N
O
N
230
N
C
N
231
N
C
N
232
N
C
N
233
N
O
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
N
N
244
S
C
N
245
N
C
N
246
N
O
N
247
N
C
N
248
N
O
N
249
N
O
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
N
N
258
S
C
N
259
N
C
N
260
N
O
N
261
R
C
N
262
N
O
N
263
N
C
N
264
N
O
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
N
N
275
S
C
N
276
N
C
N
277
N
O
N
278
N
C
Y
279
N
C
Y
280
N
C
Y
281
N
C
Y
282
N
N
Y
283
N
C
Y
284
N
C
Y
285
N
C
Y
286
N
C
Y
287
N
C
N
288
N
O
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
N
N
302
S
C
N
303
N
C
N
304
N
O
N
305
N
C
Y
306
N
C
Y
307
N
C
Y
308
N
C
Y
309
N
C
Y
310
N
C
Y
311
N
C
N
312
N
O
N
313
N
O
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
N
N
326
S
C
N
327
N
C
N
328
N
O
N
329
N
C
N
330
N
C
N
331
N
C
N
332
N
O
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
doub
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
doub
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
Y
204
N
doub
Y
205
N
sing
Y
206
N
sing
N
207
N
sing
Y
208
N
doub
N
209
N
sing
Y
210
N
doub
N
211
N
sing
Y
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
doub
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
doub
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
doub
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
doub
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
Y
273
N
doub
Y
274
N
sing
Y
275
N
sing
N
276
N
sing
Y
277
N
doub
Y
278
N
sing
Y
279
N
sing
N
280
N
sing
Y
281
N
sing
Y
282
N
doub
N
283
N
sing
Y
284
N
doub
N
285
N
sing
Y
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
Y
301
N
doub
Y
302
N
sing
Y
303
N
sing
N
304
N
sing
Y
305
N
doub
N
306
N
sing
Y
307
N
doub
N
308
N
sing
Y
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
doub
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
To be Published
0353
Strucutral comparison of two HMG-boxes in the non-histone protein HMG-2 with in the HMG-1
10.2210/pdb1j3x/pdb
pdb_00001j3x
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
1
1.0
9064.328
High mobility group protein 2
N-TERMINAL DOMAIN
C23S
1
man
polymer
High mobility group B2(HMG2) A domain
no
no
MGKGDPNKPRGKMSSYAFFVQTSREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDREMKN
MGKGDPNKPRGKMSSYAFFVQTSREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDREMKN
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
pig
Sus
Escherichia
sample
9823
Sus scrofa
562
Escherichia coli
PLASMID
pET-22b
database_2
pdbx_struct_assembly
pdbx_struct_oper_list
struct_ref_seq_dif
chem_comp_atom
chem_comp_bond
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
Data collection
1
0
2004-06-29
1
1
2008-04-27
1
2
2011-07-13
1
3
2021-11-10
1
4
2023-12-27
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
PDBJ
Y
PDBJ
2003-02-19
REL
REL
The structure was determined using triple-resonance NMR spectroscopy.
structures with the lowest energy
100
30
3D_13C-separated_NOESY
3D_15N-separated_NOESY
2D NOESY
CT_HMQC
50mM Na2SO4
5.0
ambient
293
K
The structure was also refined with ARIA ver.1.1
simulated annealing
1
lowest energy
1mM N-terminal Domain U-15N,13C; 50mM Acetate buffer Na
95% H2O/5% D2O
1mM N-terminal Domain U-15N; 50mM Acetate buffer Na
95% H2O/5% D2O
1mM N-terminal Domain non-label; 50mM Acetate buffer Na
100% D2O
refinement
X-PLOR
3.851
Delaglio
processing
NMRPipe
2001.157.17.50
750
Varian
INOVA
MET
1
n
1
MET
1
A
GLY
2
n
2
GLY
2
A
LYS
3
n
3
LYS
3
A
GLY
4
n
4
GLY
4
A
ASP
5
n
5
ASP
5
A
PRO
6
n
6
PRO
6
A
ASN
7
n
7
ASN
7
A
LYS
8
n
8
LYS
8
A
PRO
9
n
9
PRO
9
A
ARG
10
n
10
ARG
10
A
GLY
11
n
11
GLY
11
A
LYS
12
n
12
LYS
12
A
MET
13
n
13
MET
13
A
SER
14
n
14
SER
14
A
SER
15
n
15
SER
15
A
TYR
16
n
16
TYR
16
A
ALA
17
n
17
ALA
17
A
PHE
18
n
18
PHE
18
A
PHE
19
n
19
PHE
19
A
VAL
20
n
20
VAL
20
A
GLN
21
n
21
GLN
21
A
THR
22
n
22
THR
22
A
SER
23
n
23
SER
23
A
ARG
24
n
24
ARG
24
A
GLU
25
n
25
GLU
25
A
GLU
26
n
26
GLU
26
A
HIS
27
n
27
HIS
27
A
LYS
28
n
28
LYS
28
A
LYS
29
n
29
LYS
29
A
LYS
30
n
30
LYS
30
A
HIS
31
n
31
HIS
31
A
PRO
32
n
32
PRO
32
A
ASP
33
n
33
ASP
33
A
SER
34
n
34
SER
34
A
SER
35
n
35
SER
35
A
VAL
36
n
36
VAL
36
A
ASN
37
n
37
ASN
37
A
PHE
38
n
38
PHE
38
A
ALA
39
n
39
ALA
39
A
GLU
40
n
40
GLU
40
A
PHE
41
n
41
PHE
41
A
SER
42
n
42
SER
42
A
LYS
43
n
43
LYS
43
A
LYS
44
n
44
LYS
44
A
CYS
45
n
45
CYS
45
A
SER
46
n
46
SER
46
A
GLU
47
n
47
GLU
47
A
ARG
48
n
48
ARG
48
A
TRP
49
n
49
TRP
49
A
LYS
50
n
50
LYS
50
A
THR
51
n
51
THR
51
A
MET
52
n
52
MET
52
A
SER
53
n
53
SER
53
A
ALA
54
n
54
ALA
54
A
LYS
55
n
55
LYS
55
A
GLU
56
n
56
GLU
56
A
LYS
57
n
57
LYS
57
A
SER
58
n
58
SER
58
A
LYS
59
n
59
LYS
59
A
PHE
60
n
60
PHE
60
A
GLU
61
n
61
GLU
61
A
ASP
62
n
62
ASP
62
A
MET
63
n
63
MET
63
A
ALA
64
n
64
ALA
64
A
LYS
65
n
65
LYS
65
A
SER
66
n
66
SER
66
A
ASP
67
n
67
ASP
67
A
LYS
68
n
68
LYS
68
A
ALA
69
n
69
ALA
69
A
ARG
70
n
70
ARG
70
A
TYR
71
n
71
TYR
71
A
ASP
72
n
72
ASP
72
A
ARG
73
n
73
ARG
73
A
GLU
74
n
74
GLU
74
A
MET
75
n
75
MET
75
A
LYS
76
n
76
LYS
76
A
ASN
77
n
77
ASN
77
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
A
O
H
PHE
SER
38
42
1.59
2
A
A
O
H
PHE
SER
38
42
1.58
3
A
A
O
H
PHE
SER
38
42
1.59
4
A
A
O
H
PHE
SER
38
42
1.59
5
A
A
O
H
PHE
SER
38
42
1.54
6
A
A
O
H
PHE
SER
38
42
1.59
6
A
A
O
HG
PHE
SER
19
23
1.59
7
A
A
O
H
PHE
SER
38
42
1.59
9
A
A
O
H
PHE
SER
38
42
1.56
9
A
A
O
HG1
PHE
THR
18
22
1.60
10
A
A
O
H
PHE
SER
38
42
1.60
11
A
A
O
H
PHE
SER
38
42
1.56
12
A
A
O
H
PHE
SER
38
42
1.56
13
A
A
O
H
PHE
SER
38
42
1.56
14
A
A
O
H
PHE
SER
38
42
1.58
15
A
A
O
H
PHE
SER
38
42
1.56
18
A
A
O
H
PHE
SER
38
42
1.56
19
A
A
O
H
PHE
SER
38
42
1.57
20
A
A
O
H
PHE
SER
38
42
1.58
21
A
A
O
H
PHE
SER
38
42
1.57
22
A
A
O
H
PHE
SER
38
42
1.53
23
A
A
O
H
PHE
SER
38
42
1.56
25
A
A
O
H
PHE
SER
38
42
1.58
26
A
A
O
H
PHE
SER
38
42
1.48
28
A
A
O
H
PHE
SER
38
42
1.54
29
A
A
O
H
PHE
SER
38
42
1.55
30
A
A
O
H
PHE
SER
38
42
1.50
1
A
ARG
10
0.294
SIDE CHAIN
1
A
ARG
24
0.318
SIDE CHAIN
1
A
ARG
48
0.314
SIDE CHAIN
1
A
ARG
70
0.260
SIDE CHAIN
1
A
ARG
73
0.295
SIDE CHAIN
2
A
ARG
10
0.314
SIDE CHAIN
2
A
ARG
24
0.293
SIDE CHAIN
2
A
ARG
48
0.317
SIDE CHAIN
2
A
ARG
70
0.277
SIDE CHAIN
2
A
ARG
73
0.284
SIDE CHAIN
3
A
ARG
10
0.284
SIDE CHAIN
3
A
ARG
24
0.245
SIDE CHAIN
3
A
ARG
48
0.295
SIDE CHAIN
3
A
ARG
70
0.301
SIDE CHAIN
3
A
ARG
73
0.267
SIDE CHAIN
4
A
ARG
10
0.292
SIDE CHAIN
4
A
ARG
24
0.318
SIDE CHAIN
4
A
ARG
48
0.299
SIDE CHAIN
4
A
ARG
70
0.305
SIDE CHAIN
4
A
ARG
73
0.287
SIDE CHAIN
5
A
ARG
10
0.269
SIDE CHAIN
5
A
ARG
24
0.312
SIDE CHAIN
5
A
ARG
48
0.317
SIDE CHAIN
5
A
ARG
70
0.317
SIDE CHAIN
5
A
ARG
73
0.303
SIDE CHAIN
6
A
ARG
10
0.277
SIDE CHAIN
6
A
ARG
24
0.315
SIDE CHAIN
6
A
ARG
48
0.312
SIDE CHAIN
6
A
ARG
70
0.264
SIDE CHAIN
6
A
ARG
73
0.291
SIDE CHAIN
7
A
ARG
10
0.279
SIDE CHAIN
7
A
ARG
24
0.279
SIDE CHAIN
7
A
ARG
48
0.300
SIDE CHAIN
7
A
ARG
70
0.313
SIDE CHAIN
7
A
ARG
73
0.317
SIDE CHAIN
8
A
ARG
10
0.284
SIDE CHAIN
8
A
ARG
24
0.283
SIDE CHAIN
8
A
ARG
48
0.309
SIDE CHAIN
8
A
ARG
70
0.232
SIDE CHAIN
8
A
ARG
73
0.308
SIDE CHAIN
9
A
ARG
10
0.258
SIDE CHAIN
9
A
ARG
24
0.288
SIDE CHAIN
9
A
ARG
48
0.261
SIDE CHAIN
9
A
ARG
70
0.313
SIDE CHAIN
9
A
ARG
73
0.302
SIDE CHAIN
10
A
ARG
10
0.294
SIDE CHAIN
10
A
ARG
24
0.318
SIDE CHAIN
10
A
ARG
48
0.289
SIDE CHAIN
10
A
ARG
70
0.305
SIDE CHAIN
10
A
ARG
73
0.255
SIDE CHAIN
11
A
ARG
10
0.317
SIDE CHAIN
11
A
ARG
24
0.302
SIDE CHAIN
11
A
ARG
48
0.307
SIDE CHAIN
11
A
ARG
70
0.297
SIDE CHAIN
11
A
ARG
73
0.296
SIDE CHAIN
12
A
ARG
10
0.251
SIDE CHAIN
12
A
ARG
24
0.314
SIDE CHAIN
12
A
ARG
48
0.305
SIDE CHAIN
12
A
ARG
70
0.292
SIDE CHAIN
12
A
ARG
73
0.307
SIDE CHAIN
13
A
ARG
10
0.306
SIDE CHAIN
13
A
ARG
24
0.306
SIDE CHAIN
13
A
ARG
48
0.304
SIDE CHAIN
13
A
ARG
70
0.317
SIDE CHAIN
13
A
ARG
73
0.282
SIDE CHAIN
14
A
ARG
10
0.283
SIDE CHAIN
14
A
ARG
24
0.315
SIDE CHAIN
14
A
ARG
48
0.300
SIDE CHAIN
14
A
ARG
70
0.274
SIDE CHAIN
14
A
ARG
73
0.304
SIDE CHAIN
15
A
ARG
10
0.294
SIDE CHAIN
15
A
ARG
24
0.310
SIDE CHAIN
15
A
ARG
48
0.277
SIDE CHAIN
15
A
ARG
70
0.289
SIDE CHAIN
15
A
ARG
73
0.318
SIDE CHAIN
16
A
ARG
10
0.247
SIDE CHAIN
16
A
ARG
24
0.284
SIDE CHAIN
16
A
ARG
48
0.317
SIDE CHAIN
16
A
ARG
70
0.310
SIDE CHAIN
16
A
ARG
73
0.274
SIDE CHAIN
17
A
ARG
10
0.281
SIDE CHAIN
17
A
ARG
24
0.255
SIDE CHAIN
17
A
ARG
48
0.315
SIDE CHAIN
17
A
ARG
70
0.318
SIDE CHAIN
17
A
ARG
73
0.303
SIDE CHAIN
18
A
ARG
10
0.310
SIDE CHAIN
18
A
ARG
24
0.317
SIDE CHAIN
18
A
ARG
48
0.317
SIDE CHAIN
18
A
ARG
70
0.293
SIDE CHAIN
18
A
ARG
73
0.270
SIDE CHAIN
19
A
ARG
10
0.277
SIDE CHAIN
19
A
ARG
24
0.262
SIDE CHAIN
19
A
ARG
48
0.301
SIDE CHAIN
19
A
ARG
70
0.315
SIDE CHAIN
19
A
ARG
73
0.271
SIDE CHAIN
20
A
ARG
10
0.285
SIDE CHAIN
20
A
ARG
24
0.316
SIDE CHAIN
20
A
ARG
48
0.317
SIDE CHAIN
20
A
ARG
70
0.290
SIDE CHAIN
20
A
ARG
73
0.310
SIDE CHAIN
21
A
ARG
10
0.304
SIDE CHAIN
21
A
ARG
24
0.314
SIDE CHAIN
21
A
ARG
48
0.244
SIDE CHAIN
21
A
ARG
70
0.307
SIDE CHAIN
21
A
ARG
73
0.268
SIDE CHAIN
22
A
ARG
10
0.247
SIDE CHAIN
22
A
ARG
24
0.317
SIDE CHAIN
22
A
ARG
48
0.309
SIDE CHAIN
22
A
ARG
70
0.286
SIDE CHAIN
22
A
ARG
73
0.293
SIDE CHAIN
23
A
ARG
10
0.308
SIDE CHAIN
23
A
ARG
24
0.317
SIDE CHAIN
23
A
ARG
48
0.273
SIDE CHAIN
23
A
ARG
70
0.316
SIDE CHAIN
23
A
ARG
73
0.317
SIDE CHAIN
24
A
ARG
10
0.303
SIDE CHAIN
24
A
ARG
24
0.291
SIDE CHAIN
24
A
ARG
48
0.264
SIDE CHAIN
24
A
ARG
70
0.316
SIDE CHAIN
24
A
ARG
73
0.309
SIDE CHAIN
25
A
ARG
10
0.313
SIDE CHAIN
25
A
ARG
24
0.307
SIDE CHAIN
25
A
ARG
48
0.316
SIDE CHAIN
25
A
ARG
70
0.304
SIDE CHAIN
25
A
ARG
73
0.296
SIDE CHAIN
26
A
ARG
10
0.313
SIDE CHAIN
26
A
ARG
24
0.288
SIDE CHAIN
26
A
ARG
48
0.305
SIDE CHAIN
26
A
ARG
70
0.308
SIDE CHAIN
26
A
ARG
73
0.286
SIDE CHAIN
27
A
ARG
10
0.279
SIDE CHAIN
27
A
ARG
24
0.279
SIDE CHAIN
27
A
ARG
48
0.306
SIDE CHAIN
27
A
ARG
70
0.311
SIDE CHAIN
27
A
ARG
73
0.289
SIDE CHAIN
28
A
ARG
10
0.299
SIDE CHAIN
28
A
ARG
24
0.263
SIDE CHAIN
28
A
ARG
48
0.316
SIDE CHAIN
28
A
ARG
70
0.301
SIDE CHAIN
28
A
ARG
73
0.312
SIDE CHAIN
29
A
ARG
10
0.281
SIDE CHAIN
29
A
ARG
24
0.315
SIDE CHAIN
29
A
ARG
48
0.314
SIDE CHAIN
29
A
ARG
70
0.315
SIDE CHAIN
29
A
ARG
73
0.315
SIDE CHAIN
30
A
ARG
10
0.318
SIDE CHAIN
30
A
ARG
24
0.312
SIDE CHAIN
30
A
ARG
48
0.291
SIDE CHAIN
30
A
ARG
70
0.263
SIDE CHAIN
30
A
ARG
73
0.225
SIDE CHAIN
1
A
LYS
3
-103.19
-67.63
1
A
LYS
12
-104.43
-167.93
1
A
MET
13
-116.19
-159.46
1
A
ASP
33
-107.38
65.29
1
A
VAL
36
-106.21
74.81
1
A
ASN
37
-58.92
-176.06
1
A
ARG
73
-100.61
42.23
1
A
GLU
74
-126.92
-56.26
2
A
PRO
9
-72.58
-165.63
2
A
ARG
10
-79.42
-169.05
2
A
LYS
12
52.88
-167.26
2
A
MET
13
-129.36
-169.58
2
A
VAL
36
-167.77
103.34
3
A
ASP
5
-174.77
-59.97
3
A
ARG
10
-154.23
44.50
3
A
VAL
36
-162.95
71.51
3
A
ASN
37
-59.49
-168.50
3
A
GLU
74
-133.10
-44.84
4
A
ASN
7
-125.31
-158.96
4
A
ARG
10
-153.10
36.29
4
A
LYS
29
-168.25
-41.24
4
A
ASP
33
-92.39
58.71
4
A
VAL
36
-167.52
69.48
4
A
ASN
37
-60.41
-173.14
5
A
LYS
12
-102.88
-169.22
5
A
MET
13
-101.95
-168.47
5
A
ASP
33
-107.89
41.26
5
A
ASN
37
-58.21
177.10
6
A
ASP
5
-158.18
56.26
6
A
ASN
7
-138.86
-47.61
6
A
LYS
12
52.77
-168.80
6
A
SER
35
56.17
172.47
6
A
VAL
36
-168.32
79.04
6
A
ASN
37
-59.86
172.90
6
A
ARG
73
-98.99
34.99
6
A
GLU
74
-131.69
-43.50
7
A
LYS
3
-154.92
-44.35
7
A
PRO
9
-72.62
-166.73
7
A
MET
13
-106.96
-75.88
7
A
HIS
27
-96.87
30.20
7
A
LYS
28
-126.89
-51.28
7
A
HIS
31
-117.43
69.70
7
A
ASP
33
-93.46
59.10
7
A
VAL
36
-156.04
69.22
7
A
ASN
37
-60.18
-178.26
7
A
ARG
73
-98.63
36.60
7
A
GLU
74
-130.97
-45.11
8
A
LYS
3
-153.56
32.53
8
A
ARG
10
-58.52
177.27
8
A
LYS
12
53.22
-179.04
8
A
MET
13
-138.79
-41.15
8
A
SER
14
62.48
162.01
8
A
ASP
33
-96.81
55.55
8
A
SER
34
-152.13
-158.40
8
A
VAL
36
-156.23
70.04
8
A
ASN
37
-58.84
172.64
8
A
ARG
73
-102.90
44.38
9
A
LYS
12
-119.50
-167.94
9
A
ASP
33
-106.01
64.54
9
A
SER
34
-153.12
-49.69
9
A
SER
35
54.79
174.56
9
A
ASN
37
-90.53
51.49
9
A
PHE
38
56.94
-84.90
10
A
LYS
3
-154.48
45.08
10
A
ASP
5
-174.59
-60.14
10
A
ASN
7
-121.34
-70.45
10
A
SER
35
54.97
98.00
10
A
VAL
36
-107.53
77.63
10
A
ASN
37
-59.36
-173.49
10
A
ARG
73
-99.09
42.51
11
A
LYS
3
-155.02
-51.85
11
A
ASP
5
-154.23
62.19
11
A
ASN
7
-136.57
-48.71
11
A
LYS
12
-124.49
-168.57
11
A
ASP
33
-99.70
48.93
11
A
SER
35
52.82
96.03
11
A
ASN
37
-94.46
46.85
11
A
PHE
38
60.13
-78.59
11
A
SER
53
-104.30
-168.68
11
A
TYR
71
-140.13
31.10
11
A
ARG
73
-98.13
31.66
12
A
HIS
27
-95.23
36.30
12
A
LYS
29
-108.39
-60.29
12
A
LYS
30
-111.54
62.07
12
A
HIS
31
-144.95
54.20
12
A
ASP
33
-101.89
40.39
12
A
ASN
37
-58.75
175.02
12
A
ASP
72
-93.93
46.66
12
A
ARG
73
-152.10
-44.59
13
A
ARG
10
-65.42
-178.39
13
A
LYS
12
-100.83
-169.17
13
A
MET
13
-103.01
-168.52
13
A
LYS
29
-152.88
-44.65
13
A
ASP
33
-94.75
59.85
13
A
SER
34
-152.27
-158.83
13
A
VAL
36
-158.37
68.53
13
A
MET
52
-60.41
-168.68
13
A
ARG
73
-118.13
52.03
14
A
LYS
3
-158.14
41.46
14
A
HIS
27
-96.48
38.88
14
A
LYS
30
-113.15
64.89
14
A
ASN
37
-58.88
-177.90
14
A
ASP
72
-96.90
37.48
14
A
ARG
73
-150.83
-59.95
15
A
ASP
5
-174.22
-60.36
15
A
ARG
10
-167.27
41.45
15
A
MET
13
-160.85
-162.76
15
A
HIS
31
-143.42
58.86
15
A
VAL
36
-167.40
65.46
15
A
ASN
37
-58.63
-174.34
15
A
GLU
74
-131.09
-43.49
16
A
ASP
5
-152.14
57.60
16
A
ASN
7
-139.76
-51.77
16
A
PRO
9
-72.75
-165.39
16
A
SER
14
-69.61
-178.98
16
A
HIS
27
-96.10
37.60
16
A
HIS
31
-144.99
53.58
16
A
VAL
36
-167.69
60.58
16
A
ASN
37
-58.19
-175.13
16
A
ASP
72
-98.40
47.87
16
A
ARG
73
-158.18
-43.73
16
A
MET
75
-94.74
40.49
17
A
ASN
37
-59.98
-167.67
17
A
ARG
73
-105.82
41.23
18
A
LYS
8
-161.30
91.08
18
A
LYS
12
-106.46
-168.96
18
A
SER
14
-154.86
44.46
18
A
SER
15
67.23
-60.58
18
A
ASP
33
-109.96
66.40
18
A
ASN
37
-59.00
-170.01
19
A
ASP
5
55.38
172.79
19
A
ASN
7
-130.90
-156.86
19
A
LYS
8
57.51
166.21
19
A
PRO
9
-74.26
-165.89
19
A
LYS
12
-108.62
-167.16
19
A
HIS
27
-95.40
37.39
19
A
HIS
31
-144.79
53.72
19
A
VAL
36
-167.31
65.73
19
A
ASP
72
-93.97
45.38
19
A
ARG
73
-141.89
-55.38
20
A
LYS
3
52.86
86.53
20
A
ASN
7
-126.55
-158.88
20
A
ARG
10
-99.90
30.41
20
A
SER
14
44.66
-156.15
20
A
ASP
33
-100.89
62.10
20
A
VAL
36
-166.61
65.35
20
A
ASN
37
-59.59
-169.73
21
A
MET
13
53.02
97.04
21
A
SER
14
-61.67
-170.81
21
A
ASP
33
-100.37
62.06
21
A
VAL
36
-167.63
68.62
21
A
ASN
37
-58.94
-173.25
21
A
SER
53
-117.74
-164.77
22
A
ASP
5
-173.33
-60.45
22
A
LYS
12
-106.71
-165.05
22
A
ASP
33
-99.62
39.01
22
A
ASN
37
-93.68
48.12
22
A
PHE
38
59.48
-77.28
22
A
LYS
76
52.98
-175.02
23
A
LYS
3
-98.60
35.53
23
A
LYS
12
-112.78
-168.49
23
A
MET
13
-126.26
-169.31
23
A
VAL
36
-163.65
71.46
23
A
PHE
38
59.55
-77.16
24
A
ASN
7
-134.70
-46.76
24
A
LYS
12
-122.34
-167.12
24
A
MET
13
-129.94
-167.81
24
A
LYS
29
-157.30
-44.18
24
A
ASP
33
-91.86
52.98
24
A
ASN
37
-123.18
-153.33
24
A
MET
75
-99.95
34.83
25
A
PRO
6
-74.82
-167.95
25
A
ASN
7
55.56
119.07
25
A
LYS
8
58.22
164.57
25
A
PRO
9
-73.88
-165.34
25
A
ARG
10
-96.72
33.82
25
A
ASP
33
-104.77
53.08
25
A
VAL
36
-168.13
89.88
25
A
ASN
37
-70.95
-168.20
26
A
LYS
3
-142.12
-55.04
26
A
ASP
5
-174.20
-60.17
26
A
VAL
36
-166.46
103.26
26
A
ASN
37
-105.79
51.56
26
A
PHE
38
65.44
-62.78
26
A
MET
52
-56.92
170.86
26
A
MET
75
-144.00
40.12
27
A
LYS
3
-149.54
30.00
27
A
ASP
5
-150.18
54.34
27
A
ASN
7
-140.55
-49.78
27
A
LYS
12
-108.25
-168.68
27
A
MET
13
-103.83
-166.34
27
A
ASP
33
-100.66
48.75
27
A
SER
34
-163.67
106.84
27
A
SER
35
-74.22
-168.52
27
A
VAL
36
-168.11
91.80
27
A
LYS
76
52.47
-170.42
28
A
ASN
7
-147.10
42.25
28
A
MET
13
-128.99
-168.76
28
A
LYS
29
-122.03
-82.21
28
A
LYS
30
-93.26
49.56
28
A
HIS
31
-142.11
53.32
28
A
ASP
33
-97.16
36.24
28
A
ASN
37
-92.08
50.12
28
A
PHE
38
67.33
-57.83
29
A
LYS
3
-150.31
-52.37
29
A
ASP
5
-170.29
-61.45
29
A
ASN
7
-155.72
-79.66
29
A
LYS
8
61.51
141.91
29
A
ARG
10
-97.20
37.68
29
A
LYS
12
53.10
-163.83
29
A
PHE
38
64.45
-61.58
29
A
GLU
74
-141.00
-45.36
30
A
ASP
5
-174.79
-60.09
30
A
MET
13
53.88
-177.32
30
A
HIS
27
-95.07
34.91
30
A
LYS
29
-122.66
-80.61
30
A
LYS
30
-93.39
51.27
30
A
HIS
31
-143.15
53.35
30
A
PHE
38
56.86
-81.21
Solution structure of the N-terminal domain of the HMGB2
1
N
N
A
SER
14
A
SER
14
HELX_P
A
GLU
26
A
GLU
26
1
1
13
A
HIS
27
A
HIS
27
HELX_P
A
HIS
31
A
HIS
31
5
2
5
A
ASN
37
A
ASN
37
HELX_P
A
MET
52
A
MET
52
1
3
16
A
SER
53
A
SER
53
HELX_P
A
TYR
71
A
TYR
71
1
4
19
DNA BINDING PROTEIN
HMG-BOX, DNA BINDING PROTEIN
HMG2_PIG
UNP
1
0
P17741
MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDREMKN
0
76
1J3X
1
77
P17741
A
1
1
77
1
CYS
engineered mutation
SER
23
1J3X
A
P17741
UNP
22
23