0.012594
0.000000
0.000000
0.000000
0.012594
0.000000
0.000000
0.000000
0.004376
0.00000
0.00000
0.00000
Razeto, A.
Kochhar, S.
Hottinger, H.
Dauter, M.
Wilson, K.S.
Lamzin, V.S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
16
90.00
90.00
90.00
79.4
79.4
228.5
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C21 H27 N7 O14 P2
663.425
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
N
N
124
S
C
N
125
N
C
N
126
N
O
N
127
N
C
Y
128
N
C
Y
129
N
N
Y
130
N
C
Y
131
N
C
Y
132
N
N
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
S
C
N
152
N
C
N
153
N
C
N
154
N
C
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
S
C
N
171
N
C
N
172
N
O
N
173
N
C
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
O
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
N
N
192
S
C
N
193
N
C
N
194
N
O
N
195
N
C
N
196
N
C
N
197
N
C
N
198
N
C
N
199
N
N
N
200
N
O
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
N
N
217
S
C
N
218
N
C
N
219
N
O
N
220
N
C
N
221
N
C
N
222
N
S
N
223
N
C
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
S
P
N
237
N
O
N
238
N
O
N
239
N
O
N
240
N
C
N
241
R
C
N
242
N
O
N
243
S
C
N
244
N
O
N
245
R
C
N
246
N
O
N
247
R
C
Y
248
N
N
Y
249
N
C
Y
250
N
N
Y
251
N
C
Y
252
N
C
N
253
N
N
Y
254
N
N
Y
255
N
C
Y
256
N
N
Y
257
N
C
N
258
N
O
N
259
N
P
N
260
N
O
N
261
N
O
N
262
N
O
N
263
N
C
N
264
R
C
N
265
N
O
N
266
S
C
N
267
N
O
N
268
R
C
N
269
N
O
N
270
R
C
Y
271
N
N
Y
272
N
C
Y
273
N
C
N
274
N
C
N
275
N
O
N
276
N
N
Y
277
N
C
Y
278
N
C
Y
279
N
C
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
N
N
308
S
C
N
309
N
C
N
310
N
O
N
311
N
C
Y
312
N
C
Y
313
N
C
Y
314
N
C
Y
315
N
C
Y
316
N
C
Y
317
N
C
N
318
N
O
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
N
N
331
S
C
N
332
N
C
N
333
N
O
N
334
N
C
N
335
N
C
N
336
N
C
N
337
N
O
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
N
N
348
S
C
N
349
N
C
N
350
N
O
N
351
N
C
N
352
N
O
N
353
N
O
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
S
N
362
N
O
N
363
N
O
N
364
N
O
N
365
N
O
N
366
N
N
N
367
S
C
N
368
N
C
N
369
N
O
N
370
R
C
N
371
N
O
N
372
N
C
N
373
N
O
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
N
N
384
S
C
N
385
N
C
N
386
N
O
N
387
N
C
Y
388
N
C
Y
389
N
C
Y
390
N
C
Y
391
N
N
Y
392
N
C
Y
393
N
C
Y
394
N
C
Y
395
N
C
Y
396
N
C
N
397
N
O
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
N
N
411
S
C
N
412
N
C
N
413
N
O
N
414
N
C
Y
415
N
C
Y
416
N
C
Y
417
N
C
Y
418
N
C
Y
419
N
C
Y
420
N
C
N
421
N
O
N
422
N
O
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
N
N
435
S
C
N
436
N
C
N
437
N
O
N
438
N
C
N
439
N
C
N
440
N
C
N
441
N
O
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
Y
127
N
sing
Y
128
N
doub
Y
129
N
doub
N
130
N
sing
Y
131
N
sing
N
132
N
sing
Y
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
Y
247
N
sing
Y
248
N
sing
Y
249
N
doub
N
250
N
sing
Y
251
N
sing
Y
252
N
sing
Y
253
N
doub
N
254
N
sing
Y
255
N
doub
N
256
N
sing
N
257
N
sing
Y
258
N
sing
Y
259
N
doub
N
260
N
sing
Y
261
N
sing
N
262
N
sing
N
263
N
doub
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
Y
284
N
sing
Y
285
N
doub
Y
286
N
doub
N
287
N
sing
N
288
N
sing
Y
289
N
sing
N
290
N
doub
N
291
N
sing
N
292
N
sing
N
293
N
sing
Y
294
N
doub
N
295
N
sing
Y
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
doub
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
Y
310
N
doub
Y
311
N
sing
Y
312
N
sing
N
313
N
sing
Y
314
N
doub
N
315
N
sing
Y
316
N
doub
N
317
N
sing
Y
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
doub
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
doub
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
doub
N
353
N
doub
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
doub
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
doub
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
Y
383
N
doub
Y
384
N
sing
Y
385
N
sing
N
386
N
sing
Y
387
N
doub
Y
388
N
sing
Y
389
N
sing
N
390
N
sing
Y
391
N
sing
Y
392
N
doub
N
393
N
sing
Y
394
N
doub
N
395
N
sing
Y
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
doub
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
Y
411
N
doub
Y
412
N
sing
Y
413
N
sing
N
414
N
sing
Y
415
N
doub
N
416
N
sing
Y
417
N
doub
N
418
N
sing
Y
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
doub
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
318
109
119
10.1016/S0022-2836(02)00086-4
12054772
Domain closure, substrate specificity and catalysis of D-lactate dehydrogenase from Lactobacillus bulgaricus.
2002
10.2210/pdb1j49/pdb
pdb_00001j49
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
298
1
MIRRORS
IMAGE PLATE
1994-12-01
MARRESEARCH
SILICON CRYSTAL
SINGLE WAVELENGTH
M
x-ray
1
0.916
1.0
X11
EMBL/DESY, HAMBURG
0.916
SYNCHROTRON
EMBL/DESY, HAMBURG BEAMLINE X11
37121.125
D-LACTATE DEHYDROGENASE
1.1.1.28
2
man
polymer
663.425
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
2
syn
non-polymer
96.063
SULFATE ION
1
syn
non-polymer
18.015
water
279
nat
water
D-LDH
no
no
MTKIFAYAIREDEKPFLKEWEDAHKDVEVEYTDKLLTPETVALAKGADGVVVYQQLDYIAETLQALADNGITKMSLRNVG
VDNIDMAKAKELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQV
FMQIMEGFGAKVITYDIFRNPELEKKGYYVDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLV
DTDAVIRGLDSGKIFGYAMDVYEGEVGIFNEDWEGKEFPDARLADLIARPNVLVTPHTAFYTTHAVRNMVVKAFDNNLEL
VEGKEAETPVKVG
MTKIFAYAIREDEKPFLKEWEDAHKDVEVEYTDKLLTPETVALAKGADGVVVYQQLDYIAETLQALADNGITKMSLRNVG
VDNIDMAKAKELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQV
FMQIMEGFGAKVITYDIFRNPELEKKGYYVDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLV
DTDAVIRGLDSGKIFGYAMDVYEGEVGIFNEDWEGKEFPDARLADLIARPNVLVTPHTAFYTTHAVRNMVVKAFDNNLEL
VEGKEAETPVKVG
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Lactobacillus
Lactobacillus delbrueckii
N42
Escherichia
sample
NESTLE CULTURE COLLECTION. PCR AMPLIFIED LDHA GENE
CYTOPLASM
LDHA
1585
Lactobacillus delbrueckii subsp. bulgaricus
CYTOPLASM
LDHA
562
Escherichia coli
SURE
PLASMID
PKBULDH
2
2.45
49
5.0
pH 5.0
chem_comp_atom
chem_comp_bond
database_2
diffrn_source
pdbx_initial_refinement_model
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Refinement description
1
0
2002-05-29
1
1
2008-04-26
1
2
2011-07-13
1
3
2023-08-16
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_diffrn_source.pdbx_synchrotron_site
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
SEQUENCE
The authors maintain that their sequence is
correct. The density for these residues suggests
ILE59, ARG117, AND VAL152 instead of those in
the database reference match.
RCSB
Y
RCSB
2001-08-14
REL
REL
NAD
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
SO4
SULFATE ION
HOH
water
2DLD
PDB ENTRY 2DLD
PDB
experimental model
NAD
340
2
NAD
NAD
350
A
SUL
341
3
SO4
SO4
341
B
NAD
340
2
NAD
NAD
360
B
HOH
2
4
HOH
HOH
351
A
HOH
3
4
HOH
HOH
352
A
HOH
6
4
HOH
HOH
353
A
HOH
12
4
HOH
HOH
354
A
HOH
13
4
HOH
HOH
355
A
HOH
14
4
HOH
HOH
356
A
HOH
18
4
HOH
HOH
357
A
HOH
19
4
HOH
HOH
358
A
HOH
20
4
HOH
HOH
359
A
HOH
23
4
HOH
HOH
360
A
HOH
24
4
HOH
HOH
361
A
HOH
25
4
HOH
HOH
362
A
HOH
26
4
HOH
HOH
363
A
HOH
29
4
HOH
HOH
364
A
HOH
30
4
HOH
HOH
365
A
HOH
31
4
HOH
HOH
366
A
HOH
32
4
HOH
HOH
367
A
HOH
36
4
HOH
HOH
368
A
HOH
38
4
HOH
HOH
369
A
HOH
42
4
HOH
HOH
370
A
HOH
46
4
HOH
HOH
371
A
HOH
47
4
HOH
HOH
372
A
HOH
49
4
HOH
HOH
373
A
HOH
53
4
HOH
HOH
374
A
HOH
56
4
HOH
HOH
375
A
HOH
59
4
HOH
HOH
376
A
HOH
60
4
HOH
HOH
377
A
HOH
61
4
HOH
HOH
378
A
HOH
63
4
HOH
HOH
379
A
HOH
66
4
HOH
HOH
380
A
HOH
69
4
HOH
HOH
381
A
HOH
70
4
HOH
HOH
382
A
HOH
71
4
HOH
HOH
383
A
HOH
73
4
HOH
HOH
384
A
HOH
77
4
HOH
HOH
385
A
HOH
79
4
HOH
HOH
386
A
HOH
80
4
HOH
HOH
387
A
HOH
83
4
HOH
HOH
388
A
HOH
85
4
HOH
HOH
389
A
HOH
87
4
HOH
HOH
390
A
HOH
89
4
HOH
HOH
391
A
HOH
90
4
HOH
HOH
392
A
HOH
97
4
HOH
HOH
393
A
HOH
100
4
HOH
HOH
394
A
HOH
101
4
HOH
HOH
395
A
HOH
102
4
HOH
HOH
396
A
HOH
106
4
HOH
HOH
397
A
HOH
108
4
HOH
HOH
398
A
HOH
109
4
HOH
HOH
399
A
HOH
110
4
HOH
HOH
400
A
HOH
111
4
HOH
HOH
401
A
HOH
114
4
HOH
HOH
402
A
HOH
119
4
HOH
HOH
403
A
HOH
121
4
HOH
HOH
404
A
HOH
126
4
HOH
HOH
405
A
HOH
127
4
HOH
HOH
406
A
HOH
135
4
HOH
HOH
407
A
HOH
136
4
HOH
HOH
408
A
HOH
140
4
HOH
HOH
409
A
HOH
141
4
HOH
HOH
410
A
HOH
142
4
HOH
HOH
411
A
HOH
144
4
HOH
HOH
412
A
HOH
145
4
HOH
HOH
413
A
HOH
146
4
HOH
HOH
414
A
HOH
147
4
HOH
HOH
415
A
HOH
149
4
HOH
HOH
416
A
HOH
151
4
HOH
HOH
417
A
HOH
153
4
HOH
HOH
418
A
HOH
157
4
HOH
HOH
419
A
HOH
158
4
HOH
HOH
420
A
HOH
159
4
HOH
HOH
421
A
HOH
160
4
HOH
HOH
422
A
HOH
161
4
HOH
HOH
423
A
HOH
163
4
HOH
HOH
424
A
HOH
166
4
HOH
HOH
425
A
HOH
167
4
HOH
HOH
426
A
HOH
169
4
HOH
HOH
427
A
HOH
170
4
HOH
HOH
428
A
HOH
172
4
HOH
HOH
429
A
HOH
173
4
HOH
HOH
430
A
HOH
175
4
HOH
HOH
431
A
HOH
176
4
HOH
HOH
432
A
HOH
177
4
HOH
HOH
433
A
HOH
178
4
HOH
HOH
434
A
HOH
179
4
HOH
HOH
435
A
HOH
181
4
HOH
HOH
436
A
HOH
182
4
HOH
HOH
437
A
HOH
183
4
HOH
HOH
438
A
HOH
184
4
HOH
HOH
439
A
HOH
186
4
HOH
HOH
440
A
HOH
187
4
HOH
HOH
441
A
HOH
189
4
HOH
HOH
442
A
HOH
191
4
HOH
HOH
443
A
HOH
194
4
HOH
HOH
444
A
HOH
196
4
HOH
HOH
445
A
HOH
198
4
HOH
HOH
446
A
HOH
201
4
HOH
HOH
447
A
HOH
207
4
HOH
HOH
448
A
HOH
211
4
HOH
HOH
449
A
HOH
214
4
HOH
HOH
450
A
HOH
215
4
HOH
HOH
451
A
HOH
217
4
HOH
HOH
452
A
HOH
219
4
HOH
HOH
453
A
HOH
221
4
HOH
HOH
454
A
HOH
223
4
HOH
HOH
455
A
HOH
224
4
HOH
HOH
456
A
HOH
226
4
HOH
HOH
457
A
HOH
227
4
HOH
HOH
458
A
HOH
229
4
HOH
HOH
459
A
HOH
231
4
HOH
HOH
460
A
HOH
232
4
HOH
HOH
461
A
HOH
235
4
HOH
HOH
462
A
HOH
236
4
HOH
HOH
463
A
HOH
237
4
HOH
HOH
464
A
HOH
239
4
HOH
HOH
465
A
HOH
240
4
HOH
HOH
466
A
HOH
243
4
HOH
HOH
467
A
HOH
244
4
HOH
HOH
468
A
HOH
246
4
HOH
HOH
469
A
HOH
247
4
HOH
HOH
470
A
HOH
250
4
HOH
HOH
471
A
HOH
252
4
HOH
HOH
472
A
HOH
255
4
HOH
HOH
473
A
HOH
256
4
HOH
HOH
474
A
HOH
261
4
HOH
HOH
475
A
HOH
262
4
HOH
HOH
476
A
HOH
264
4
HOH
HOH
477
A
HOH
266
4
HOH
HOH
478
A
HOH
268
4
HOH
HOH
479
A
HOH
269
4
HOH
HOH
480
A
HOH
270
4
HOH
HOH
481
A
HOH
271
4
HOH
HOH
482
A
HOH
274
4
HOH
HOH
483
A
HOH
275
4
HOH
HOH
484
A
HOH
277
4
HOH
HOH
485
A
HOH
278
4
HOH
HOH
486
A
HOH
279
4
HOH
HOH
487
A
HOH
1
4
HOH
HOH
361
B
HOH
4
4
HOH
HOH
362
B
HOH
5
4
HOH
HOH
363
B
HOH
7
4
HOH
HOH
364
B
HOH
8
4
HOH
HOH
365
B
HOH
9
4
HOH
HOH
366
B
HOH
10
4
HOH
HOH
367
B
HOH
11
4
HOH
HOH
368
B
HOH
15
4
HOH
HOH
369
B
HOH
16
4
HOH
HOH
370
B
HOH
17
4
HOH
HOH
371
B
HOH
21
4
HOH
HOH
372
B
HOH
22
4
HOH
HOH
373
B
HOH
27
4
HOH
HOH
374
B
HOH
28
4
HOH
HOH
375
B
HOH
33
4
HOH
HOH
376
B
HOH
34
4
HOH
HOH
377
B
HOH
35
4
HOH
HOH
378
B
HOH
37
4
HOH
HOH
379
B
HOH
39
4
HOH
HOH
380
B
HOH
40
4
HOH
HOH
381
B
HOH
41
4
HOH
HOH
382
B
HOH
43
4
HOH
HOH
383
B
HOH
44
4
HOH
HOH
384
B
HOH
45
4
HOH
HOH
385
B
HOH
48
4
HOH
HOH
386
B
HOH
50
4
HOH
HOH
387
B
HOH
51
4
HOH
HOH
388
B
HOH
52
4
HOH
HOH
389
B
HOH
54
4
HOH
HOH
390
B
HOH
55
4
HOH
HOH
391
B
HOH
57
4
HOH
HOH
392
B
HOH
58
4
HOH
HOH
393
B
HOH
62
4
HOH
HOH
394
B
HOH
64
4
HOH
HOH
395
B
HOH
65
4
HOH
HOH
396
B
HOH
67
4
HOH
HOH
397
B
HOH
68
4
HOH
HOH
398
B
HOH
72
4
HOH
HOH
399
B
HOH
74
4
HOH
HOH
400
B
HOH
75
4
HOH
HOH
401
B
HOH
76
4
HOH
HOH
402
B
HOH
78
4
HOH
HOH
403
B
HOH
81
4
HOH
HOH
404
B
HOH
82
4
HOH
HOH
405
B
HOH
84
4
HOH
HOH
406
B
HOH
86
4
HOH
HOH
407
B
HOH
88
4
HOH
HOH
408
B
HOH
91
4
HOH
HOH
409
B
HOH
92
4
HOH
HOH
410
B
HOH
93
4
HOH
HOH
411
B
HOH
94
4
HOH
HOH
412
B
HOH
95
4
HOH
HOH
413
B
HOH
96
4
HOH
HOH
414
B
HOH
98
4
HOH
HOH
415
B
HOH
99
4
HOH
HOH
416
B
HOH
103
4
HOH
HOH
417
B
HOH
104
4
HOH
HOH
418
B
HOH
105
4
HOH
HOH
419
B
HOH
107
4
HOH
HOH
420
B
HOH
112
4
HOH
HOH
421
B
HOH
113
4
HOH
HOH
422
B
HOH
115
4
HOH
HOH
423
B
HOH
116
4
HOH
HOH
424
B
HOH
117
4
HOH
HOH
425
B
HOH
118
4
HOH
HOH
426
B
HOH
120
4
HOH
HOH
427
B
HOH
122
4
HOH
HOH
428
B
HOH
123
4
HOH
HOH
429
B
HOH
124
4
HOH
HOH
430
B
HOH
125
4
HOH
HOH
431
B
HOH
128
4
HOH
HOH
432
B
HOH
129
4
HOH
HOH
433
B
HOH
130
4
HOH
HOH
434
B
HOH
131
4
HOH
HOH
435
B
HOH
132
4
HOH
HOH
436
B
HOH
133
4
HOH
HOH
437
B
HOH
134
4
HOH
HOH
438
B
HOH
137
4
HOH
HOH
439
B
HOH
138
4
HOH
HOH
440
B
HOH
139
4
HOH
HOH
441
B
HOH
143
4
HOH
HOH
442
B
HOH
148
4
HOH
HOH
443
B
HOH
150
4
HOH
HOH
444
B
HOH
152
4
HOH
HOH
445
B
HOH
154
4
HOH
HOH
446
B
HOH
155
4
HOH
HOH
447
B
HOH
156
4
HOH
HOH
448
B
HOH
162
4
HOH
HOH
449
B
HOH
164
4
HOH
HOH
450
B
HOH
165
4
HOH
HOH
451
B
HOH
168
4
HOH
HOH
452
B
HOH
171
4
HOH
HOH
453
B
HOH
174
4
HOH
HOH
454
B
HOH
180
4
HOH
HOH
455
B
HOH
185
4
HOH
HOH
456
B
HOH
188
4
HOH
HOH
457
B
HOH
190
4
HOH
HOH
458
B
HOH
192
4
HOH
HOH
459
B
HOH
193
4
HOH
HOH
460
B
HOH
195
4
HOH
HOH
461
B
HOH
197
4
HOH
HOH
462
B
HOH
199
4
HOH
HOH
463
B
HOH
200
4
HOH
HOH
464
B
HOH
202
4
HOH
HOH
465
B
HOH
203
4
HOH
HOH
466
B
HOH
204
4
HOH
HOH
467
B
HOH
205
4
HOH
HOH
468
B
HOH
206
4
HOH
HOH
469
B
HOH
208
4
HOH
HOH
470
B
HOH
209
4
HOH
HOH
471
B
HOH
210
4
HOH
HOH
472
B
HOH
212
4
HOH
HOH
473
B
HOH
213
4
HOH
HOH
474
B
HOH
216
4
HOH
HOH
475
B
HOH
218
4
HOH
HOH
476
B
HOH
220
4
HOH
HOH
477
B
HOH
222
4
HOH
HOH
478
B
HOH
225
4
HOH
HOH
479
B
HOH
228
4
HOH
HOH
480
B
HOH
230
4
HOH
HOH
481
B
HOH
233
4
HOH
HOH
482
B
HOH
234
4
HOH
HOH
483
B
HOH
238
4
HOH
HOH
484
B
HOH
241
4
HOH
HOH
485
B
HOH
242
4
HOH
HOH
486
B
HOH
245
4
HOH
HOH
487
B
HOH
248
4
HOH
HOH
488
B
HOH
249
4
HOH
HOH
489
B
HOH
251
4
HOH
HOH
490
B
HOH
253
4
HOH
HOH
491
B
HOH
254
4
HOH
HOH
492
B
HOH
257
4
HOH
HOH
493
B
HOH
258
4
HOH
HOH
494
B
HOH
259
4
HOH
HOH
495
B
HOH
260
4
HOH
HOH
496
B
HOH
263
4
HOH
HOH
497
B
HOH
265
4
HOH
HOH
498
B
HOH
267
4
HOH
HOH
499
B
HOH
272
4
HOH
HOH
500
B
HOH
273
4
HOH
HOH
501
B
HOH
276
4
HOH
HOH
502
B
MET
1
n
1
MET
1
A
THR
2
n
2
THR
2
A
LYS
3
n
3
LYS
3
A
ILE
4
n
4
ILE
4
A
PHE
5
n
5
PHE
5
A
ALA
6
n
6
ALA
6
A
TYR
7
n
7
TYR
7
A
ALA
8
n
8
ALA
8
A
ILE
9
n
9
ILE
9
A
ARG
10
n
10
ARG
10
A
GLU
11
n
11
GLU
11
A
ASP
12
n
12
ASP
12
A
GLU
13
n
13
GLU
13
A
LYS
14
n
14
LYS
14
A
PRO
15
n
15
PRO
15
A
PHE
16
n
16
PHE
16
A
LEU
17
n
17
LEU
17
A
LYS
18
n
18
LYS
18
A
GLU
19
n
19
GLU
19
A
TRP
20
n
20
TRP
20
A
GLU
21
n
21
GLU
21
A
ASP
22
n
22
ASP
22
A
ALA
23
n
23
ALA
23
A
HIS
24
n
24
HIS
24
A
LYS
25
n
25
LYS
25
A
ASP
26
n
26
ASP
26
A
VAL
27
n
27
VAL
27
A
GLU
28
n
28
GLU
28
A
VAL
29
n
29
VAL
29
A
GLU
30
n
30
GLU
30
A
TYR
31
n
31
TYR
31
A
THR
32
n
32
THR
32
A
ASP
33
n
33
ASP
33
A
LYS
34
n
34
LYS
34
A
LEU
35
n
35
LEU
35
A
LEU
36
n
36
LEU
36
A
THR
37
n
37
THR
37
A
PRO
38
n
38
PRO
38
A
GLU
39
n
39
GLU
39
A
THR
40
n
40
THR
40
A
VAL
41
n
41
VAL
41
A
ALA
42
n
42
ALA
42
A
LEU
43
n
43
LEU
43
A
ALA
44
n
44
ALA
44
A
LYS
45
n
45
LYS
45
A
GLY
46
n
46
GLY
46
A
ALA
47
n
47
ALA
47
A
ASP
48
n
48
ASP
48
A
GLY
49
n
49
GLY
49
A
VAL
50
n
50
VAL
50
A
VAL
51
n
51
VAL
51
A
VAL
52
n
52
VAL
52
A
TYR
53
n
53
TYR
53
A
GLN
54
n
54
GLN
54
A
GLN
55
n
55
GLN
55
A
LEU
56
n
56
LEU
56
A
ASP
57
n
57
ASP
57
A
TYR
58
n
58
TYR
58
A
ILE
59
n
59
ILE
59
A
ALA
60
n
60
ALA
60
A
GLU
61
n
61
GLU
61
A
THR
62
n
62
THR
62
A
LEU
63
n
63
LEU
63
A
GLN
64
n
64
GLN
64
A
ALA
65
n
65
ALA
65
A
LEU
66
n
66
LEU
66
A
ALA
67
n
67
ALA
67
A
ASP
68
n
68
ASP
68
A
ALA
69
n
69
ASN
69
A
GLY
70
n
70
GLY
70
A
ILE
71
n
71
ILE
71
A
THR
72
n
72
THR
72
A
LYS
73
n
73
LYS
73
A
MET
74
n
74
MET
74
A
SER
75
n
75
SER
75
A
LEU
76
n
76
LEU
76
A
ARG
77
n
77
ARG
77
A
ASN
78
n
78
ASN
78
A
VAL
79
n
79
VAL
79
A
GLY
80
n
80
GLY
80
A
VAL
81
n
81
VAL
81
A
ASP
82
n
82
ASP
82
A
ASN
83
n
83
ASN
83
A
ILE
84
n
84
ILE
84
A
ASP
85
n
85
ASP
85
A
MET
86
n
86
MET
86
A
ALA
87
n
87
ALA
87
A
LYS
88
n
88
LYS
88
A
ALA
89
n
89
ALA
89
A
LYS
90
n
90
LYS
90
A
GLU
91
n
91
GLU
91
A
LEU
92
n
92
LEU
92
A
GLY
93
n
93
GLY
93
A
PHE
94
n
94
PHE
94
A
GLN
95
n
95
GLN
95
A
ILE
96
n
96
ILE
96
A
THR
97
n
97
THR
97
A
ASN
98
n
98
ASN
98
A
VAL
99
n
99
VAL
99
A
PRO
100
n
100
PRO
100
A
VAL
101
n
101
VAL
101
A
TYR
102
n
102
TYR
102
A
SER
103
n
103
SER
103
A
PRO
104
n
104
PRO
104
A
ASN
105
n
105
ASN
105
A
ALA
106
n
106
ALA
106
A
ILE
107
n
107
ILE
107
A
ALA
108
n
108
ALA
108
A
GLU
109
n
109
GLU
109
A
HIS
110
n
110
HIS
110
A
ALA
111
n
111
ALA
111
A
ALA
112
n
112
ALA
112
A
ILE
113
n
113
ILE
113
A
GLN
114
n
114
GLN
114
A
ALA
115
n
115
ALA
115
A
ALA
116
n
116
ALA
116
A
ARG
117
n
117
ARG
117
A
ILE
118
n
118
ILE
118
A
LEU
119
n
119
LEU
119
A
ARG
120
n
120
ARG
120
A
GLN
121
n
121
GLN
121
A
ASP
122
n
122
ASP
122
A
LYS
123
n
123
LYS
123
A
ALA
124
n
124
ALA
124
A
MET
125
n
125
MET
125
A
ASP
126
n
126
ASP
126
A
GLU
127
n
127
GLU
127
A
LYS
128
n
128
LYS
128
A
VAL
129
n
129
VAL
129
A
ALA
130
n
130
ALA
130
A
ARG
131
n
131
ARG
131
A
HIS
132
n
132
HIS
132
A
ASP
133
n
133
ASP
133
A
LEU
134
n
134
LEU
134
A
ARG
135
n
135
ARG
135
A
TRP
136
n
136
TRP
136
A
ALA
137
n
137
ALA
137
A
PRO
138
n
138
PRO
138
A
THR
139
n
139
THR
139
A
ILE
140
n
140
ILE
140
A
GLY
141
n
141
GLY
141
A
ARG
142
n
142
ARG
142
A
GLU
143
n
143
GLU
143
A
VAL
144
n
144
VAL
144
A
ARG
145
n
145
ARG
145
A
ASP
146
n
146
ASP
146
A
GLN
147
n
147
GLN
147
A
VAL
148
n
148
VAL
148
A
VAL
149
n
149
VAL
149
A
GLY
150
n
150
GLY
150
A
VAL
151
n
151
VAL
151
A
VAL
152
n
152
VAL
152
A
GLY
153
n
153
GLY
153
A
THR
154
n
154
THR
154
A
GLY
155
n
155
GLY
155
A
HIS
156
n
156
HIS
156
A
ILE
157
n
157
ILE
157
A
GLY
158
n
158
GLY
158
A
GLN
159
n
159
GLN
159
A
VAL
160
n
160
VAL
160
A
PHE
161
n
161
PHE
161
A
MET
162
n
162
MET
162
A
GLN
163
n
163
GLN
163
A
ILE
164
n
164
ILE
164
A
MET
165
n
165
MET
165
A
GLU
166
n
166
GLU
166
A
GLY
167
n
167
GLY
167
A
PHE
168
n
168
PHE
168
A
GLY
169
n
169
GLY
169
A
ALA
170
n
170
ALA
170
A
LYS
171
n
171
LYS
171
A
VAL
172
n
172
VAL
172
A
ILE
173
n
173
ILE
173
A
THR
174
n
174
THR
174
A
TYR
175
n
175
TYR
175
A
ASP
176
n
176
ASP
176
A
ILE
177
n
177
ILE
177
A
PHE
178
n
178
PHE
178
A
ARG
179
n
179
ARG
179
A
ASN
180
n
180
ASN
180
A
PRO
181
n
181
PRO
181
A
GLU
182
n
182
GLU
182
A
LEU
183
n
183
LEU
183
A
GLU
184
n
184
GLU
184
A
LYS
185
n
185
LYS
185
A
LYS
186
n
186
LYS
186
A
GLY
187
n
187
GLY
187
A
TYR
188
n
188
TYR
188
A
TYR
189
n
189
TYR
189
A
VAL
190
n
190
VAL
190
A
ASP
191
n
191
ASP
191
A
SER
192
n
192
SER
192
A
LEU
193
n
193
LEU
193
A
ASP
194
n
194
ASP
194
A
ASP
195
n
195
ASP
195
A
LEU
196
n
196
LEU
196
A
TYR
197
n
197
TYR
197
A
LYS
198
n
198
LYS
198
A
GLN
199
n
199
GLN
199
A
ALA
200
n
200
ALA
200
A
ASP
201
n
201
ASP
201
A
VAL
202
n
202
VAL
202
A
ILE
203
n
203
ILE
203
A
SER
204
n
204
SER
204
A
LEU
205
n
205
LEU
205
A
HIS
206
n
206
HIS
206
A
VAL
207
n
207
VAL
207
A
PRO
208
n
208
PRO
208
A
ASP
209
n
209
ASP
209
A
VAL
210
n
210
VAL
210
A
PRO
211
n
211
PRO
211
A
ALA
212
n
212
ALA
212
A
ASN
213
n
213
ASN
213
A
VAL
214
n
214
VAL
214
A
HIS
215
n
215
HIS
215
A
MET
216
n
216
MET
216
A
ILE
217
n
217
ILE
217
A
ASN
218
n
218
ASN
218
A
ASP
219
n
219
ASP
219
A
GLU
220
n
220
GLU
220
A
SER
221
n
221
SER
221
A
ILE
222
n
222
ILE
222
A
ALA
223
n
223
ALA
223
A
LYS
224
n
224
LYS
224
A
MET
225
n
225
MET
225
A
LYS
226
n
226
LYS
226
A
GLN
227
n
227
GLN
227
A
ASP
228
n
228
ASP
228
A
VAL
229
n
229
VAL
229
A
VAL
230
n
230
VAL
230
A
ILE
231
n
231
ILE
231
A
VAL
232
n
232
VAL
232
A
ASN
233
n
233
ASN
233
A
VAL
234
n
234
VAL
234
A
SER
235
n
235
SER
235
A
ARG
236
n
236
ARG
236
A
GLY
237
n
237
GLY
237
A
PRO
238
n
238
PRO
238
A
LEU
239
n
239
LEU
239
A
VAL
240
n
240
VAL
240
A
ASP
241
n
241
ASP
241
A
THR
242
n
242
THR
242
A
ASP
243
n
243
ASP
243
A
ALA
244
n
244
ALA
244
A
VAL
245
n
245
VAL
245
A
ILE
246
n
246
ILE
246
A
ARG
247
n
247
ARG
247
A
GLY
248
n
248
GLY
248
A
LEU
249
n
249
LEU
249
A
ASP
250
n
250
ASP
250
A
SER
251
n
251
SER
251
A
GLY
252
n
252
GLY
252
A
LYS
253
n
253
LYS
253
A
ILE
254
n
254
ILE
254
A
PHE
255
n
255
PHE
255
A
GLY
256
n
256
GLY
256
A
TYR
257
n
257
TYR
257
A
ALA
258
n
258
ALA
258
A
MET
259
n
259
MET
259
A
ASP
260
n
260
ASP
260
A
VAL
261
n
261
VAL
261
A
TYR
262
n
262
TYR
262
A
GLU
263
n
263
GLU
263
A
GLY
264
n
264
GLY
264
A
GLU
265
n
265
GLU
265
A
VAL
266
n
266
VAL
266
A
GLY
267
n
267
GLY
267
A
ILE
268
n
268
ILE
268
A
PHE
269
n
269
PHE
269
A
ASN
270
n
270
ASN
270
A
GLU
271
n
271
GLU
271
A
ASP
272
n
272
ASP
272
A
TRP
273
n
273
TRP
273
A
GLU
274
n
274
GLU
274
A
GLY
275
n
275
GLY
275
A
LYS
276
n
276
LYS
276
A
GLU
277
n
277
GLU
277
A
PHE
278
n
278
PHE
278
A
PRO
279
n
279
PRO
279
A
ASP
280
n
280
ASP
280
A
ALA
281
n
281
ALA
281
A
ARG
282
n
282
ARG
282
A
LEU
283
n
283
LEU
283
A
ALA
284
n
284
ALA
284
A
ASP
285
n
285
ASP
285
A
LEU
286
n
286
LEU
286
A
ILE
287
n
287
ILE
287
A
ALA
288
n
288
ALA
288
A
ARG
289
n
289
ARG
289
A
PRO
290
n
290
PRO
290
A
ASN
291
n
291
ASN
291
A
VAL
292
n
292
VAL
292
A
LEU
293
n
293
LEU
293
A
VAL
294
n
294
VAL
294
A
THR
295
n
295
THR
295
A
PRO
296
n
296
PRO
296
A
HIS
297
n
297
HIS
297
A
THR
298
n
298
THR
298
A
ALA
299
n
299
ALA
299
A
PHE
300
n
300
PHE
300
A
TYR
301
n
301
TYR
301
A
THR
302
n
302
THR
302
A
THR
303
n
303
THR
303
A
HIS
304
n
304
HIS
304
A
ALA
305
n
305
ALA
305
A
VAL
306
n
306
VAL
306
A
ARG
307
n
307
ARG
307
A
ASN
308
n
308
ASN
308
A
MET
309
n
309
MET
309
A
VAL
310
n
310
VAL
310
A
VAL
311
n
311
VAL
311
A
LYS
312
n
312
LYS
312
A
ALA
313
n
313
ALA
313
A
PHE
314
n
314
PHE
314
A
ASP
315
n
315
ASP
315
A
ASN
316
n
316
ASN
316
A
ASN
317
n
317
ASN
317
A
LEU
318
n
318
LEU
318
A
GLU
319
n
319
GLU
319
A
LEU
320
n
320
LEU
320
A
VAL
321
n
321
VAL
321
A
GLU
322
n
322
GLU
322
A
GLY
323
n
323
GLY
323
A
LYS
324
n
324
LYS
324
A
GLU
325
n
325
GLU
325
A
ALA
326
n
326
ALA
326
A
GLU
327
n
327
GLU
327
A
THR
328
n
328
THR
328
A
PRO
329
n
329
PRO
329
A
VAL
330
n
330
VAL
330
A
ALA
331
n
331
LYS
331
A
VAL
332
n
332
VAL
332
A
n
333
333
A
MET
1
n
1
MET
1
B
THR
2
n
2
THR
2
B
LYS
3
n
3
LYS
3
B
ILE
4
n
4
ILE
4
B
PHE
5
n
5
PHE
5
B
ALA
6
n
6
ALA
6
B
TYR
7
n
7
TYR
7
B
ALA
8
n
8
ALA
8
B
ILE
9
n
9
ILE
9
B
ARG
10
n
10
ARG
10
B
GLU
11
n
11
GLU
11
B
ASP
12
n
12
ASP
12
B
GLU
13
n
13
GLU
13
B
LYS
14
n
14
LYS
14
B
PRO
15
n
15
PRO
15
B
PHE
16
n
16
PHE
16
B
LEU
17
n
17
LEU
17
B
LYS
18
n
18
LYS
18
B
GLU
19
n
19
GLU
19
B
TRP
20
n
20
TRP
20
B
GLU
21
n
21
GLU
21
B
ASP
22
n
22
ASP
22
B
ALA
23
n
23
ALA
23
B
HIS
24
n
24
HIS
24
B
LYS
25
n
25
LYS
25
B
ASP
26
n
26
ASP
26
B
VAL
27
n
27
VAL
27
B
GLU
28
n
28
GLU
28
B
VAL
29
n
29
VAL
29
B
GLU
30
n
30
GLU
30
B
TYR
31
n
31
TYR
31
B
THR
32
n
32
THR
32
B
ASP
33
n
33
ASP
33
B
LYS
34
n
34
LYS
34
B
LEU
35
n
35
LEU
35
B
LEU
36
n
36
LEU
36
B
THR
37
n
37
THR
37
B
PRO
38
n
38
PRO
38
B
GLU
39
n
39
GLU
39
B
THR
40
n
40
THR
40
B
VAL
41
n
41
VAL
41
B
ALA
42
n
42
ALA
42
B
LEU
43
n
43
LEU
43
B
ALA
44
n
44
ALA
44
B
LYS
45
n
45
LYS
45
B
GLY
46
n
46
GLY
46
B
ALA
47
n
47
ALA
47
B
ASP
48
n
48
ASP
48
B
GLY
49
n
49
GLY
49
B
VAL
50
n
50
VAL
50
B
VAL
51
n
51
VAL
51
B
VAL
52
n
52
VAL
52
B
TYR
53
n
53
TYR
53
B
GLN
54
n
54
GLN
54
B
GLN
55
n
55
GLN
55
B
LEU
56
n
56
LEU
56
B
ASP
57
n
57
ASP
57
B
TYR
58
n
58
TYR
58
B
ILE
59
n
59
ILE
59
B
ALA
60
n
60
ALA
60
B
GLU
61
n
61
GLU
61
B
THR
62
n
62
THR
62
B
LEU
63
n
63
LEU
63
B
GLN
64
n
64
GLN
64
B
ALA
65
n
65
ALA
65
B
LEU
66
n
66
LEU
66
B
ALA
67
n
67
ALA
67
B
ASP
68
n
68
ASP
68
B
ASN
69
n
69
ASN
69
B
GLY
70
n
70
GLY
70
B
ILE
71
n
71
ILE
71
B
THR
72
n
72
THR
72
B
LYS
73
n
73
LYS
73
B
MET
74
n
74
MET
74
B
SER
75
n
75
SER
75
B
LEU
76
n
76
LEU
76
B
ARG
77
n
77
ARG
77
B
ASN
78
n
78
ASN
78
B
VAL
79
n
79
VAL
79
B
GLY
80
n
80
GLY
80
B
VAL
81
n
81
VAL
81
B
ASP
82
n
82
ASP
82
B
ASN
83
n
83
ASN
83
B
ILE
84
n
84
ILE
84
B
ASP
85
n
85
ASP
85
B
MET
86
n
86
MET
86
B
ALA
87
n
87
ALA
87
B
LYS
88
n
88
LYS
88
B
ALA
89
n
89
ALA
89
B
LYS
90
n
90
LYS
90
B
GLU
91
n
91
GLU
91
B
LEU
92
n
92
LEU
92
B
GLY
93
n
93
GLY
93
B
PHE
94
n
94
PHE
94
B
GLN
95
n
95
GLN
95
B
ILE
96
n
96
ILE
96
B
THR
97
n
97
THR
97
B
ASN
98
n
98
ASN
98
B
VAL
99
n
99
VAL
99
B
PRO
100
n
100
PRO
100
B
VAL
101
n
101
VAL
101
B
TYR
102
n
102
TYR
102
B
SER
103
n
103
SER
103
B
PRO
104
n
104
PRO
104
B
ASN
105
n
105
ASN
105
B
ALA
106
n
106
ALA
106
B
ILE
107
n
107
ILE
107
B
ALA
108
n
108
ALA
108
B
GLU
109
n
109
GLU
109
B
HIS
110
n
110
HIS
110
B
ALA
111
n
111
ALA
111
B
ALA
112
n
112
ALA
112
B
ILE
113
n
113
ILE
113
B
GLN
114
n
114
GLN
114
B
ALA
115
n
115
ALA
115
B
ALA
116
n
116
ALA
116
B
ARG
117
n
117
ARG
117
B
ILE
118
n
118
ILE
118
B
LEU
119
n
119
LEU
119
B
ARG
120
n
120
ARG
120
B
GLN
121
n
121
GLN
121
B
ASP
122
n
122
ASP
122
B
LYS
123
n
123
LYS
123
B
ALA
124
n
124
ALA
124
B
MET
125
n
125
MET
125
B
ASP
126
n
126
ASP
126
B
GLU
127
n
127
GLU
127
B
LYS
128
n
128
LYS
128
B
VAL
129
n
129
VAL
129
B
ALA
130
n
130
ALA
130
B
ARG
131
n
131
ARG
131
B
HIS
132
n
132
HIS
132
B
ASP
133
n
133
ASP
133
B
LEU
134
n
134
LEU
134
B
ARG
135
n
135
ARG
135
B
TRP
136
n
136
TRP
136
B
ALA
137
n
137
ALA
137
B
PRO
138
n
138
PRO
138
B
THR
139
n
139
THR
139
B
ILE
140
n
140
ILE
140
B
GLY
141
n
141
GLY
141
B
ARG
142
n
142
ARG
142
B
GLU
143
n
143
GLU
143
B
VAL
144
n
144
VAL
144
B
ARG
145
n
145
ARG
145
B
ASP
146
n
146
ASP
146
B
GLN
147
n
147
GLN
147
B
VAL
148
n
148
VAL
148
B
VAL
149
n
149
VAL
149
B
GLY
150
n
150
GLY
150
B
VAL
151
n
151
VAL
151
B
VAL
152
n
152
VAL
152
B
GLY
153
n
153
GLY
153
B
THR
154
n
154
THR
154
B
GLY
155
n
155
GLY
155
B
HIS
156
n
156
HIS
156
B
ILE
157
n
157
ILE
157
B
GLY
158
n
158
GLY
158
B
GLN
159
n
159
GLN
159
B
VAL
160
n
160
VAL
160
B
PHE
161
n
161
PHE
161
B
MET
162
n
162
MET
162
B
GLN
163
n
163
GLN
163
B
ILE
164
n
164
ILE
164
B
MET
165
n
165
MET
165
B
GLU
166
n
166
GLU
166
B
GLY
167
n
167
GLY
167
B
PHE
168
n
168
PHE
168
B
GLY
169
n
169
GLY
169
B
ALA
170
n
170
ALA
170
B
LYS
171
n
171
LYS
171
B
VAL
172
n
172
VAL
172
B
ILE
173
n
173
ILE
173
B
THR
174
n
174
THR
174
B
TYR
175
n
175
TYR
175
B
ASP
176
n
176
ASP
176
B
ILE
177
n
177
ILE
177
B
PHE
178
n
178
PHE
178
B
ARG
179
n
179
ARG
179
B
ASN
180
n
180
ASN
180
B
PRO
181
n
181
PRO
181
B
GLU
182
n
182
GLU
182
B
LEU
183
n
183
LEU
183
B
GLU
184
n
184
GLU
184
B
LYS
185
n
185
LYS
185
B
LYS
186
n
186
LYS
186
B
GLY
187
n
187
GLY
187
B
TYR
188
n
188
TYR
188
B
TYR
189
n
189
TYR
189
B
VAL
190
n
190
VAL
190
B
ASP
191
n
191
ASP
191
B
SER
192
n
192
SER
192
B
LEU
193
n
193
LEU
193
B
ASP
194
n
194
ASP
194
B
ASP
195
n
195
ASP
195
B
LEU
196
n
196
LEU
196
B
TYR
197
n
197
TYR
197
B
LYS
198
n
198
LYS
198
B
GLN
199
n
199
GLN
199
B
ALA
200
n
200
ALA
200
B
ASP
201
n
201
ASP
201
B
VAL
202
n
202
VAL
202
B
ILE
203
n
203
ILE
203
B
SER
204
n
204
SER
204
B
LEU
205
n
205
LEU
205
B
HIS
206
n
206
HIS
206
B
VAL
207
n
207
VAL
207
B
PRO
208
n
208
PRO
208
B
ASP
209
n
209
ASP
209
B
VAL
210
n
210
VAL
210
B
PRO
211
n
211
PRO
211
B
ALA
212
n
212
ALA
212
B
ASN
213
n
213
ASN
213
B
VAL
214
n
214
VAL
214
B
HIS
215
n
215
HIS
215
B
MET
216
n
216
MET
216
B
ILE
217
n
217
ILE
217
B
ASN
218
n
218
ASN
218
B
ASP
219
n
219
ASP
219
B
GLU
220
n
220
GLU
220
B
SER
221
n
221
SER
221
B
ILE
222
n
222
ILE
222
B
ALA
223
n
223
ALA
223
B
LYS
224
n
224
LYS
224
B
MET
225
n
225
MET
225
B
LYS
226
n
226
LYS
226
B
GLN
227
n
227
GLN
227
B
ASP
228
n
228
ASP
228
B
VAL
229
n
229
VAL
229
B
VAL
230
n
230
VAL
230
B
ILE
231
n
231
ILE
231
B
VAL
232
n
232
VAL
232
B
ASN
233
n
233
ASN
233
B
VAL
234
n
234
VAL
234
B
SER
235
n
235
SER
235
B
ARG
236
n
236
ARG
236
B
GLY
237
n
237
GLY
237
B
PRO
238
n
238
PRO
238
B
LEU
239
n
239
LEU
239
B
VAL
240
n
240
VAL
240
B
ASP
241
n
241
ASP
241
B
THR
242
n
242
THR
242
B
ASP
243
n
243
ASP
243
B
ALA
244
n
244
ALA
244
B
VAL
245
n
245
VAL
245
B
ILE
246
n
246
ILE
246
B
ARG
247
n
247
ARG
247
B
GLY
248
n
248
GLY
248
B
LEU
249
n
249
LEU
249
B
ASP
250
n
250
ASP
250
B
SER
251
n
251
SER
251
B
GLY
252
n
252
GLY
252
B
LYS
253
n
253
LYS
253
B
ILE
254
n
254
ILE
254
B
PHE
255
n
255
PHE
255
B
GLY
256
n
256
GLY
256
B
TYR
257
n
257
TYR
257
B
ALA
258
n
258
ALA
258
B
MET
259
n
259
MET
259
B
ASP
260
n
260
ASP
260
B
VAL
261
n
261
VAL
261
B
TYR
262
n
262
TYR
262
B
GLU
263
n
263
GLU
263
B
GLY
264
n
264
GLY
264
B
GLU
265
n
265
GLU
265
B
VAL
266
n
266
VAL
266
B
GLY
267
n
267
GLY
267
B
ILE
268
n
268
ILE
268
B
PHE
269
n
269
PHE
269
B
ASN
270
n
270
ASN
270
B
GLU
271
n
271
GLU
271
B
ASP
272
n
272
ASP
272
B
TRP
273
n
273
TRP
273
B
GLU
274
n
274
GLU
274
B
GLY
275
n
275
GLY
275
B
LYS
276
n
276
LYS
276
B
GLU
277
n
277
GLU
277
B
PHE
278
n
278
PHE
278
B
PRO
279
n
279
PRO
279
B
ASP
280
n
280
ASP
280
B
ALA
281
n
281
ALA
281
B
ARG
282
n
282
ARG
282
B
LEU
283
n
283
LEU
283
B
ALA
284
n
284
ALA
284
B
ASP
285
n
285
ASP
285
B
LEU
286
n
286
LEU
286
B
ILE
287
n
287
ILE
287
B
ALA
288
n
288
ALA
288
B
ARG
289
n
289
ARG
289
B
PRO
290
n
290
PRO
290
B
ASN
291
n
291
ASN
291
B
VAL
292
n
292
VAL
292
B
LEU
293
n
293
LEU
293
B
VAL
294
n
294
VAL
294
B
THR
295
n
295
THR
295
B
PRO
296
n
296
PRO
296
B
HIS
297
n
297
HIS
297
B
THR
298
n
298
THR
298
B
ALA
299
n
299
ALA
299
B
PHE
300
n
300
PHE
300
B
TYR
301
n
301
TYR
301
B
THR
302
n
302
THR
302
B
THR
303
n
303
THR
303
B
HIS
304
n
304
HIS
304
B
ALA
305
n
305
ALA
305
B
VAL
306
n
306
VAL
306
B
ARG
307
n
307
ARG
307
B
ASN
308
n
308
ASN
308
B
MET
309
n
309
MET
309
B
VAL
310
n
310
VAL
310
B
VAL
311
n
311
VAL
311
B
LYS
312
n
312
LYS
312
B
ALA
313
n
313
ALA
313
B
PHE
314
n
314
PHE
314
B
ASP
315
n
315
ASP
315
B
ASN
316
n
316
ASN
316
B
ASP
317
n
317
ASN
317
B
LEU
318
n
318
LEU
318
B
GLU
319
n
319
GLU
319
B
LEU
320
n
320
LEU
320
B
VAL
321
n
321
VAL
321
B
GLU
322
n
322
GLU
322
B
GLY
323
n
323
GLY
323
B
LYS
324
n
324
LYS
324
B
GLU
325
n
325
GLU
325
B
ALA
326
n
326
ALA
326
B
GLU
327
n
327
GLU
327
B
THR
328
n
328
THR
328
B
PRO
329
n
329
PRO
329
B
VAL
330
n
330
VAL
330
B
LYS
331
n
331
LYS
331
B
VAL
332
n
332
VAL
332
B
n
333
333
B
author_and_software_defined_assembly
PISA
2
dimeric
8250
-59
25340
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
GLU
30
A
O
GLU
30
A
N
ILE
4
A
N
ILE
4
A
N
PHE
5
A
N
PHE
5
A
O
GLY
49
A
O
GLY
49
A
N
VAL
52
A
N
VAL
52
A
O
SER
75
A
O
SER
75
A
N
MET
74
A
N
MET
74
A
O
THR
97
A
O
THR
97
A
O
LYS
171
A
O
LYS
171
A
N
VAL
149
A
N
VAL
149
A
N
GLY
150
A
N
GLY
150
A
O
VAL
202
A
O
VAL
202
A
N
ILE
203
A
N
ILE
203
A
O
VAL
232
A
O
VAL
232
A
N
VAL
229
A
N
VAL
229
A
O
PHE
255
A
O
PHE
255
A
N
MET
259
A
N
MET
259
A
O
LEU
293
A
O
LEU
293
B
O
GLU
30
B
O
GLU
30
B
N
ALA
6
B
N
ALA
6
B
N
PHE
5
B
N
PHE
5
B
O
VAL
51
B
O
VAL
51
B
N
VAL
52
B
N
VAL
52
B
O
SER
75
B
O
SER
75
B
N
MET
74
B
N
MET
74
B
O
GLN
95
B
O
GLN
95
B
O
LYS
171
B
O
LYS
171
B
N
VAL
149
B
N
VAL
149
B
N
GLY
150
B
N
GLY
150
B
O
VAL
202
B
O
VAL
202
B
N
ILE
203
B
N
ILE
203
B
O
VAL
232
B
O
VAL
232
B
N
ASN
233
B
N
ASN
233
B
O
ALA
258
B
O
ALA
258
B
N
MET
259
B
N
MET
259
B
O
LEU
293
B
O
LEU
293
1
A
CD
GLU
39
A
CD
GLU
39
0
Y
1
A
OE1
GLU
39
A
OE1
GLU
39
0
Y
1
A
OE2
GLU
39
A
OE2
GLU
39
0
Y
1
A
CD
GLN
55
A
CD
GLN
55
0
Y
1
A
OE1
GLN
55
A
OE1
GLN
55
0
Y
1
A
NE2
GLN
55
A
NE2
GLN
55
0
Y
1
A
CG
ASN
69
A
CG
ASN
69
1
Y
1
A
OD1
ASN
69
A
OD1
ASN
69
1
Y
1
A
ND2
ASN
69
A
ND2
ASN
69
1
Y
1
A
CG
ASP
122
A
CG
ASP
122
0
Y
1
A
OD1
ASP
122
A
OD1
ASP
122
0
Y
1
A
OD2
ASP
122
A
OD2
ASP
122
0
Y
1
A
CD
GLN
163
A
CD
GLN
163
0
Y
1
A
OE1
GLN
163
A
OE1
GLN
163
0
Y
1
A
NE2
GLN
163
A
NE2
GLN
163
0
Y
1
A
OG1
THR
174
A
OG1
THR
174
0
Y
1
A
CG2
THR
174
A
CG2
THR
174
0
Y
1
A
CG
GLU
220
A
CG
GLU
220
0
Y
1
A
CD
GLU
220
A
CD
GLU
220
0
Y
1
A
OE1
GLU
220
A
OE1
GLU
220
0
Y
1
A
OE2
GLU
220
A
OE2
GLU
220
0
Y
1
A
NE
ARG
236
A
NE
ARG
236
0
Y
1
A
CZ
ARG
236
A
CZ
ARG
236
0
Y
1
A
NH1
ARG
236
A
NH1
ARG
236
0
Y
1
A
NH2
ARG
236
A
NH2
ARG
236
0
Y
1
A
CD
GLU
277
A
CD
GLU
277
0
Y
1
A
OE1
GLU
277
A
OE1
GLU
277
0
Y
1
A
OE2
GLU
277
A
OE2
GLU
277
0
Y
1
A
CE
LYS
312
A
CE
LYS
312
0
Y
1
A
NZ
LYS
312
A
NZ
LYS
312
0
Y
1
A
CE
LYS
324
A
CE
LYS
324
0
Y
1
A
NZ
LYS
324
A
NZ
LYS
324
0
Y
1
A
CD
GLU
325
A
CD
GLU
325
0
Y
1
A
OE1
GLU
325
A
OE1
GLU
325
0
Y
1
A
OE2
GLU
325
A
OE2
GLU
325
0
Y
1
A
CG
LYS
331
A
CG
LYS
331
1
Y
1
A
CD
LYS
331
A
CD
LYS
331
1
Y
1
A
CE
LYS
331
A
CE
LYS
331
1
Y
1
A
NZ
LYS
331
A
NZ
LYS
331
1
Y
1
B
NZ
LYS
14
B
NZ
LYS
14
0
Y
1
B
CD
GLU
61
B
CD
GLU
61
0
Y
1
B
OE1
GLU
61
B
OE1
GLU
61
0
Y
1
B
OE2
GLU
61
B
OE2
GLU
61
0
Y
1
B
CG
ASP
122
B
CG
ASP
122
0
Y
1
B
OD1
ASP
122
B
OD1
ASP
122
0
Y
1
B
OD2
ASP
122
B
OD2
ASP
122
0
Y
1
B
CD
GLN
163
B
CD
GLN
163
0
Y
1
B
OE1
GLN
163
B
OE1
GLN
163
0
Y
1
B
NE2
GLN
163
B
NE2
GLN
163
0
Y
1
B
OG1
THR
174
B
OG1
THR
174
0
Y
1
B
CG2
THR
174
B
CG2
THR
174
0
Y
1
B
CD
LYS
198
B
CD
LYS
198
0
Y
1
B
CE
LYS
198
B
CE
LYS
198
0
Y
1
B
NZ
LYS
198
B
NZ
LYS
198
0
Y
1
B
CD
GLU
220
B
CD
GLU
220
0
Y
1
B
OE1
GLU
220
B
OE1
GLU
220
0
Y
1
B
OE2
GLU
220
B
OE2
GLU
220
0
Y
1
B
NZ
LYS
224
B
NZ
LYS
224
0
Y
1
B
CD1
ILE
254
B
CD1
ILE
254
0
Y
1
B
CD
GLU
277
B
CD
GLU
277
0
Y
1
B
OE1
GLU
277
B
OE1
GLU
277
0
Y
1
B
OE2
GLU
277
B
OE2
GLU
277
0
Y
1
B
CD
GLU
325
B
CD
GLU
325
0
Y
1
B
OE1
GLU
325
B
OE1
GLU
325
0
Y
1
B
OE2
GLU
325
B
OE2
GLU
325
0
Y
1
A
GLY
333
A
GLY
333
1
Y
1
B
GLY
333
B
GLY
333
1
Y
1
B
B
OD2
O
ASP
HOH
122
370
1.23
1
B
B
OD1
O
ASP
HOH
122
385
1.37
1
B
B
CE
O
LYS
HOH
3
481
1.54
1
B
B
CG
O
ASP
HOH
122
370
1.83
1
A
A
OD1
O
ASP
HOH
122
353
1.83
1
B
B
OE1
O
GLU
HOH
28
481
2.07
1
A
A
CE
O
MET
HOH
309
395
2.12
1
B
B
OG1
O
THR
HOH
139
449
2.16
1
A
A
OD1
O
ASP
HOH
48
460
2.17
1
A
A
OE2
NH2
GLU
ARG
19
307
2.17
1
B
THR
2
11.11
1
-3.06
0.50
120.30
117.24
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
77
77
77
N
1
-4.14
0.50
120.30
116.16
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
135
135
135
N
1
3.77
0.50
120.30
124.07
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
135
135
135
N
1
-3.25
0.50
120.30
117.05
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
142
142
142
N
1
-5.74
0.90
118.30
112.56
A
A
A
CB
CG
OD1
ASP
ASP
ASP
209
209
209
N
1
13.19
2.10
111.80
124.99
A
A
A
CG
CD
NE
ARG
ARG
ARG
236
236
236
N
1
12.56
1.40
123.60
136.16
A
A
A
CD
NE
CZ
ARG
ARG
ARG
236
236
236
N
1
7.02
0.90
118.30
125.32
A
A
A
CB
CG
OD2
ASP
ASP
ASP
280
280
280
N
1
-3.55
0.50
120.30
116.75
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
289
289
289
N
1
-4.03
0.50
120.30
116.27
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
77
77
77
N
1
-5.41
0.50
120.30
114.89
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
120
120
120
N
1
5.50
0.90
118.30
123.80
B
B
B
CB
CG
OD1
ASP
ASP
ASP
133
133
133
N
1
-8.13
0.50
120.30
112.17
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
135
135
135
N
1
6.41
0.50
120.30
126.71
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
135
135
135
N
1
-3.51
0.50
120.30
116.79
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
145
145
145
N
1
9.77
1.20
123.30
133.07
B
B
B
OE1
CD
OE2
GLU
GLU
GLU
263
263
263
N
1
16.90
2.20
113.40
130.30
B
B
B
CA
CB
CG
GLU
GLU
GLU
274
274
274
N
1
-11.36
1.40
123.60
112.24
B
B
B
CD
NE
CZ
ARG
ARG
ARG
307
307
307
N
1
-3.38
0.50
120.30
116.92
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
307
307
307
N
1
12.94
2.00
118.30
131.24
B
B
B
CG
CD
OE1
GLU
GLU
GLU
325
325
325
N
1
A
A
CB
OG1
THR
THR
174
174
0.135
0.020
1.428
1.563
N
1
A
A
CD
NE
ARG
ARG
236
236
-0.112
0.017
1.460
1.348
N
1
A
A
CG
CD
GLU
GLU
277
277
-0.135
0.015
1.515
1.380
N
1
B
B
CE
NZ
LYS
LYS
14
14
-0.167
0.025
1.486
1.319
N
1
B
B
CG
CD
GLU
GLU
61
61
-0.170
0.015
1.515
1.345
N
1
B
B
CB
CG
ASP
ASP
122
122
0.230
0.021
1.513
1.743
N
1
B
B
CB
OG1
THR
THR
174
174
-0.130
0.020
1.428
1.298
N
1
B
B
CG
CD
GLU
GLU
220
220
-0.181
0.015
1.515
1.334
N
1
B
B
CG
CD
GLU
GLU
277
277
-0.159
0.015
1.515
1.356
N
1
B
B
CG
CD
GLU
GLU
325
325
-0.113
0.015
1.515
1.402
N
1
A
A
CB
O
MET
GLY
1
169
2.11
1_555
7_546
1
A
THR
2
70.15
70.73
1
A
HIS
24
-147.71
54.99
1
A
PRO
38
-49.08
-19.77
1
A
TYR
53
-165.86
107.82
1
A
GLN
54
-175.59
148.77
1
A
ASP
57
-37.69
154.26
1
A
ASN
78
-123.17
-164.58
1
A
ASP
85
-54.18
92.34
1
A
SER
103
-169.26
97.02
1
A
HIS
132
74.36
33.15
1
A
THR
139
-68.70
61.97
1
A
ASP
209
-71.64
37.98
1
A
SER
235
-88.66
-80.66
1
A
ASN
270
71.07
31.64
1
A
LYS
331
-57.77
108.98
1
B
THR
2
-50.07
98.16
1
B
HIS
24
-146.44
57.63
1
B
LYS
45
-29.39
122.18
1
B
TYR
53
-164.80
112.08
1
B
ASP
68
-58.72
27.45
1
B
ASN
69
-154.84
7.01
1
B
SER
103
179.21
83.27
1
B
HIS
132
84.02
20.65
1
B
THR
154
-106.77
46.03
1
B
SER
235
-90.38
-73.58
44.4
0.2710000
0.2070000
0.2090000
2.2
15
1884
37544
5
98.7
4.35
0.11
RANDOM
1
THROUGHOUT (EXCEPT FOR THE LAST 2 REFINEMENT CYCLES)
0.0
MOLECULAR REPLACEMENT
0.27
0.24
PDB ENTRY 2DLD
2.2
15
279
5579
93
0
5207
0.015
0.015
0.025
0.020
0.033
0.030
0.8
1.0
1.5
1.5
0.8
1.0
1.4
1.5
0.026
0.030
0.030
0.050
0.2
0.2
0.3
0.3
0.23
1.0
0.23
1.0
4.3
7.0
18.8
15.0
35.6
20.0
0.0
15.0
36.1
2.2
15
1J49
38147
2
0.0710000
1
19.4
5.8
98.7
0.2100000
2.20
2.24
3.73
6.82
93.3
data reduction
DENZO
data scaling
SCALEPACK
phasing
AMoRE
refinement
REFMAC
INSIGHTS INTO DOMAIN CLOSURE, SUBSTRATE SPECIFICITY AND CATALYSIS OF D-LACTATE DEHYDROGENASE FROM LACTOBACILLUS BULGARICUS
1
N
N
1
N
N
2
N
N
3
N
N
2
N
N
4
N
N
4
N
N
A
ARG
10
A
ARG
10
HELX_P
A
ASP
12
A
ASP
12
5
1
3
A
GLU
13
A
GLU
13
HELX_P
A
ALA
23
A
ALA
23
1
2
11
A
THR
40
A
THR
40
HELX_P
A
LYS
45
A
LYS
45
5
3
6
A
ILE
59
A
ILE
59
HELX_P
A
ASP
68
A
ASP
68
1
4
10
A
ASP
85
A
ASP
85
HELX_P
A
GLY
93
A
GLY
93
1
5
9
A
SER
103
A
SER
103
HELX_P
A
ARG
120
A
ARG
120
1
6
18
A
GLN
121
A
GLN
121
HELX_P
A
ARG
131
A
ARG
131
1
7
11
A
GLU
143
A
GLU
143
HELX_P
A
ASP
146
A
ASP
146
5
8
4
A
GLY
155
A
GLY
155
HELX_P
A
PHE
168
A
PHE
168
1
9
14
A
ASN
180
A
ASN
180
HELX_P
A
GLY
187
A
GLY
187
1
10
8
A
SER
192
A
SER
192
HELX_P
A
ALA
200
A
ALA
200
1
11
9
A
ASN
218
A
ASN
218
HELX_P
A
MET
225
A
MET
225
1
12
8
A
ARG
236
A
ARG
236
HELX_P
A
VAL
240
A
VAL
240
5
13
5
A
ASP
241
A
ASP
241
HELX_P
A
SER
251
A
SER
251
1
14
11
A
ASP
280
A
ASP
280
HELX_P
A
ARG
289
A
ARG
289
1
15
10
A
THR
302
A
THR
302
HELX_P
A
GLU
322
A
GLU
322
1
16
21
B
ARG
10
B
ARG
10
HELX_P
B
ASP
12
B
ASP
12
5
17
3
B
GLU
13
B
GLU
13
HELX_P
B
ASP
22
B
ASP
22
1
18
10
B
THR
37
B
THR
37
HELX_P
B
ALA
42
B
ALA
42
1
19
6
B
LEU
43
B
LEU
43
HELX_P
B
LYS
45
B
LYS
45
5
20
3
B
ILE
59
B
ILE
59
HELX_P
B
ASP
68
B
ASP
68
1
21
10
B
ASP
85
B
ASP
85
HELX_P
B
LEU
92
B
LEU
92
1
22
8
B
SER
103
B
SER
103
HELX_P
B
GLN
121
B
GLN
121
1
23
19
B
GLN
121
B
GLN
121
HELX_P
B
ARG
131
B
ARG
131
1
24
11
B
GLU
143
B
GLU
143
HELX_P
B
ASP
146
B
ASP
146
5
25
4
B
GLY
155
B
GLY
155
HELX_P
B
PHE
168
B
PHE
168
1
26
14
B
ASN
180
B
ASN
180
HELX_P
B
GLY
187
B
GLY
187
1
27
8
B
SER
192
B
SER
192
HELX_P
B
ALA
200
B
ALA
200
1
28
9
B
VAL
210
B
VAL
210
HELX_P
B
VAL
214
B
VAL
214
5
29
5
B
ASN
218
B
ASN
218
HELX_P
B
LYS
224
B
LYS
224
1
30
7
B
ARG
236
B
ARG
236
HELX_P
B
VAL
240
B
VAL
240
5
31
5
B
ASP
241
B
ASP
241
HELX_P
B
SER
251
B
SER
251
1
32
11
B
ASP
280
B
ASP
280
HELX_P
B
ARG
289
B
ARG
289
1
33
10
B
THR
302
B
THR
302
HELX_P
B
GLU
322
B
GLU
322
1
34
21
OXIDOREDUCTASE
NAD-DEPENDENT DEHYDROGENASE, LAST STEP OF GLYCOLYSIS UNDER ANAEROBIC CONDITIONS, REVERSIBLE INTERCONVERSION OF PYRUVATE INTO D-LACTATE, OXIDOREDUCTASE
A
ALA
137
A
ALA
137
1
A
PRO
138
A
PRO
138
-0.66
B
ALA
137
B
ALA
137
1
B
PRO
138
B
PRO
138
-0.45
given
-0.310730
-0.062030
0.948470
0.096710
-0.994750
-0.033370
0.945570
0.081360
0.315100
-1.19188
54.58400
-0.08465
LDHD_LACDE
UNP
1
1
P26297
MTKIFAYAIREDEKPFLKEWEDAHKDVEVEYTDKLLTPETVALAKGADGVVVYQQLDYTAETLQALADNGITKMSLRNVG
VDNIDMAKAKELGFQITNVPVYSPNAIAEHAAIQAAAILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVIGTGHIGQV
FMQIMEGFGAKVITYDIFRNPELEKKGYYVDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLV
DTDAVIRGLDSGKIFGYAMDVYEGEVGIFNEDWEGKEFPDARLADLIARPNVLVTPHTAFYTTHAVRNMVVKAFDNNLEL
VEGKEAETPVKVG
1
333
1J49
1
333
P26297
A
1
1
333
1
333
1J49
1
333
P26297
B
1
1
333
1
THR
SEE REMARK 999
ILE
59
1J49
A
P26297
UNP
59
59
1
ALA
SEE REMARK 999
ARG
117
1J49
A
P26297
UNP
117
117
1
ILE
SEE REMARK 999
VAL
152
1J49
A
P26297
UNP
152
152
2
THR
SEE REMARK 999
ILE
59
1J49
B
P26297
UNP
59
59
2
ALA
SEE REMARK 999
ARG
117
1J49
B
P26297
UNP
117
117
2
ILE
SEE REMARK 999
VAL
152
1J49
B
P26297
UNP
152
152
5
6
5
6
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
A
GLU
28
A
GLU
28
A
TYR
31
A
TYR
31
A
LYS
3
A
LYS
3
A
ALA
6
A
ALA
6
A
GLY
49
A
GLY
49
A
VAL
52
A
VAL
52
A
LYS
73
A
LYS
73
A
LEU
76
A
LEU
76
A
GLN
95
A
GLN
95
A
THR
97
A
THR
97
A
LYS
171
A
LYS
171
A
TYR
175
A
TYR
175
A
VAL
148
A
VAL
148
A
VAL
152
A
VAL
152
A
VAL
202
A
VAL
202
A
LEU
205
A
LEU
205
A
VAL
229
A
VAL
229
A
ASN
233
A
ASN
233
A
ILE
254
A
ILE
254
A
MET
259
A
MET
259
A
VAL
292
A
VAL
292
A
VAL
294
A
VAL
294
B
GLU
28
B
GLU
28
B
TYR
31
B
TYR
31
B
LYS
3
B
LYS
3
B
ALA
6
B
ALA
6
B
GLY
49
B
GLY
49
B
VAL
52
B
VAL
52
B
LYS
73
B
LYS
73
B
LEU
76
B
LEU
76
B
GLN
95
B
GLN
95
B
THR
97
B
THR
97
B
LYS
171
B
LYS
171
B
TYR
175
B
TYR
175
B
VAL
148
B
VAL
148
B
VAL
152
B
VAL
152
B
VAL
202
B
VAL
202
B
LEU
205
B
LEU
205
B
VAL
229
B
VAL
229
B
ASN
233
B
ASN
233
B
ILE
254
B
ILE
254
B
MET
259
B
MET
259
B
VAL
292
B
VAL
292
B
VAL
294
B
VAL
294
BINDING SITE FOR RESIDUE SO4 B 341
B
SO4
341
Software
8
BINDING SITE FOR RESIDUE NAD A 350
A
NAD
350
Software
26
BINDING SITE FOR RESIDUE NAD B 360
B
NAD
360
Software
26
B
ASN
78
B
ASN
78
8
1_555
B
VAL
79
B
VAL
79
8
1_555
B
GLY
80
B
GLY
80
8
1_555
B
TYR
102
B
TYR
102
8
1_555
B
ARG
236
B
ARG
236
8
1_555
B
HIS
297
B
HIS
297
8
1_555
B
NAD
360
E
NAD
8
1_555
B
HOH
422
G
HOH
8
1_555
A
TYR
102
A
TYR
102
26
1_555
A
ILE
107
A
ILE
107
26
1_555
A
GLY
153
A
GLY
153
26
1_555
A
GLY
155
A
GLY
155
26
1_555
A
HIS
156
A
HIS
156
26
1_555
A
ILE
157
A
ILE
157
26
1_555
A
TYR
175
A
TYR
175
26
1_555
A
ASP
176
A
ASP
176
26
1_555
A
ILE
177
A
ILE
177
26
1_555
A
HIS
206
A
HIS
206
26
1_555
A
VAL
207
A
VAL
207
26
1_555
A
PRO
208
A
PRO
208
26
1_555
A
ASN
213
A
ASN
213
26
1_555
A
VAL
234
A
VAL
234
26
1_555
A
SER
235
A
SER
235
26
1_555
A
ARG
236
A
ARG
236
26
1_555
A
ASP
260
A
ASP
260
26
1_555
A
HIS
297
A
HIS
297
26
1_555
A
ALA
299
A
ALA
299
26
1_555
A
PHE
300
A
PHE
300
26
1_555
A
HOH
390
F
HOH
26
1_555
A
HOH
428
F
HOH
26
1_555
A
HOH
463
F
HOH
26
1_555
A
HOH
470
F
HOH
26
1_555
A
HOH
485
F
HOH
26
1_555
A
HOH
487
F
HOH
26
1_555
B
TYR
102
B
TYR
102
26
1_555
B
ILE
107
B
ILE
107
26
1_555
B
GLY
155
B
GLY
155
26
1_555
B
HIS
156
B
HIS
156
26
1_555
B
ILE
157
B
ILE
157
26
1_555
B
TYR
175
B
TYR
175
26
1_555
B
ASP
176
B
ASP
176
26
1_555
B
ILE
177
B
ILE
177
26
1_555
B
HIS
206
B
HIS
206
26
1_555
B
VAL
207
B
VAL
207
26
1_555
B
PRO
208
B
PRO
208
26
1_555
B
ASN
213
B
ASN
213
26
1_555
B
VAL
234
B
VAL
234
26
1_555
B
SER
235
B
SER
235
26
1_555
B
ARG
236
B
ARG
236
26
1_555
B
ASP
260
B
ASP
260
26
1_555
B
HIS
297
B
HIS
297
26
1_555
B
ALA
299
B
ALA
299
26
1_555
B
PHE
300
B
PHE
300
26
1_555
B
SO4
341
D
SO4
26
1_555
B
HOH
376
G
HOH
26
1_555
B
HOH
379
G
HOH
26
1_555
B
HOH
382
G
HOH
26
1_555
B
HOH
386
G
HOH
26
1_555
B
HOH
395
G
HOH
26
1_555
B
HOH
453
G
HOH
26
1_555
96
P 43 21 2