0.016447
0.000000
0.000000
0.000000
0.016447
0.000000
0.000000
0.000000
0.009001
0.00000
0.00000
0.00000
Hamdan, S.
Carr, P.D.
Brown, S.E.
Ollis, D.L.
Dixon, N.E.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.0
90.0
90.0
60.8
60.8
111.1
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C2 H6 O2
62.068
1,2-ETHANEDIOL
ETHYLENE GLYCOL
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mn 2
54.938
MANGANESE (II) ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C10 H15 N2 O8 P
322.208
THYMIDINE-5'-PHOSPHATE
non-polymer
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
C
N
89
N
O
N
90
N
C
N
91
N
O
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
N
N
99
S
C
N
100
N
C
N
101
N
O
N
102
N
C
N
103
N
C
N
104
N
C
N
105
N
O
N
106
N
N
N
107
N
O
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
N
N
119
S
C
N
120
N
C
N
121
N
O
N
122
N
C
N
123
N
C
N
124
N
C
N
125
N
O
N
126
N
O
N
127
N
O
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
N
C
N
139
N
C
N
140
N
O
N
141
N
O
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
N
C
Y
152
N
C
Y
153
N
N
Y
154
N
C
Y
155
N
C
Y
156
N
N
N
157
N
O
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
O
N
169
N
H
N
170
N
H
N
171
N
N
N
172
S
C
N
173
N
C
N
174
N
O
N
175
S
C
N
176
N
C
N
177
N
C
N
178
N
C
N
179
N
O
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
N
N
194
S
C
N
195
N
C
N
196
N
O
N
197
N
C
N
198
N
C
N
199
N
C
N
200
N
C
N
201
N
O
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
N
N
216
S
C
N
217
N
C
N
218
N
O
N
219
N
C
N
220
N
C
N
221
N
C
N
222
N
C
N
223
N
N
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
N
N
241
S
C
N
242
N
C
N
243
N
O
N
244
N
C
N
245
N
C
N
246
N
S
N
247
N
C
N
248
N
O
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
MN
N
261
N
N
N
262
S
C
N
263
N
C
N
264
N
O
N
265
N
C
Y
266
N
C
Y
267
N
C
Y
268
N
C
Y
269
N
C
Y
270
N
C
Y
271
N
C
N
272
N
O
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
N
N
285
S
C
N
286
N
C
N
287
N
O
N
288
N
C
N
289
N
C
N
290
N
C
N
291
N
O
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
N
N
302
S
C
N
303
N
C
N
304
N
O
N
305
N
C
N
306
N
O
N
307
N
O
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
N
N
316
S
C
N
317
N
C
N
318
N
O
N
319
R
C
N
320
N
O
N
321
N
C
N
322
N
O
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
P
N
333
N
O
N
334
N
O
N
335
N
O
N
336
N
O
N
337
N
C
N
338
R
C
N
339
N
O
N
340
S
C
N
341
N
O
N
342
N
C
N
343
R
C
N
344
N
N
N
345
N
C
N
346
N
O
N
347
N
N
N
348
N
C
N
349
N
O
N
350
N
C
N
351
N
C
N
352
N
C
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
N
N
369
S
C
N
370
N
C
N
371
N
O
N
372
N
C
Y
373
N
C
Y
374
N
C
Y
375
N
C
Y
376
N
C
Y
377
N
C
Y
378
N
C
N
379
N
O
N
380
N
O
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
N
N
393
S
C
N
394
N
C
N
395
N
O
N
396
N
C
N
397
N
C
N
398
N
C
N
399
N
O
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
doub
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
doub
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
doub
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
doub
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
doub
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
Y
149
N
sing
Y
150
N
doub
Y
151
N
doub
N
152
N
sing
Y
153
N
sing
N
154
N
sing
Y
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
doub
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
doub
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
doub
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
doub
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
doub
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
Y
257
N
doub
Y
258
N
sing
Y
259
N
sing
N
260
N
sing
Y
261
N
doub
N
262
N
sing
Y
263
N
doub
N
264
N
sing
Y
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
doub
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
doub
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
doub
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
doub
N
345
N
sing
N
346
N
sing
N
347
N
doub
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
doub
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
Y
363
N
doub
Y
364
N
sing
Y
365
N
sing
N
366
N
sing
Y
367
N
doub
N
368
N
sing
Y
369
N
doub
N
370
N
sing
Y
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
doub
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
UK
Structure
STRUE6
2005
0969-2126
10
535
546
10.1016/S0969-2126(02)00738-4
11937058
Structural Basis for Proofreading during Replication of the Escherichia coli Chromosome
2002
10.2210/pdb1j54/pdb
pdb_00001j54
100.0
1
CCD
2001-04-05
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
0.9796
1.0
BM30A
ESRF
0.9796
SYNCHROTRON
ESRF BEAMLINE BM30A
20741.689
DNA polymerase III, epsilon chain
2.7.7.7
N-terminal exonuclease domain (residues 1-186)
1
man
polymer
54.938
MANGANESE (II) ION
2
syn
non-polymer
322.208
THYMIDINE-5'-PHOSPHATE
1
syn
non-polymer
62.068
1,2-ETHANEDIOL
3
syn
non-polymer
18.015
water
225
nat
water
no
no
MSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLTGNNFHVYLKPDRLVDPEAFGVHGIADEFLLDKPTFA
EVADEFMDYIRGAELVIHNAAFDIGFMDYEFSLLKRDIPKTNTFCKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRT
LHGALLDAQILAEVYLAMTGGQTSMA
MSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLTGNNFHVYLKPDRLVDPEAFGVHGIADEFLLDKPTFA
EVADEFMDYIRGAELVIHNAAFDIGFMDYEFSLLKRDIPKTNTFCKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRT
LHGALLDAQILAEVYLAMTGGQTSMA
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Escherichia
T7-like viruses
sample
562
Escherichia coli
10760
Enterobacteria phage T7
plasmid
PSHSH1018
1
2.47
50.29
VAPOR DIFFUSION, HANGING DROP
5.8
PEG 8000, magnesium sulfate, cacodylate, pH 5.8, VAPOR DIFFUSION, HANGING DROP, temperature 277K
277
chem_comp_atom
chem_comp_bond
database_2
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2002-10-16
1
1
2008-04-26
1
2
2011-07-13
1
3
2023-12-27
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
1J53 contains the same protein at pH 8.5
RCSB
Y
RCSB
2002-01-22
REL
REL
MN
MANGANESE (II) ION
TMP
THYMIDINE-5'-PHOSPHATE
EDO
1,2-ETHANEDIOL
HOH
water
MN2
3000
2
MN
MN
3000
A
MN2
3001
2
MN
MN
3001
A
TMP
2000
3
TMP
TMP
2000
A
EGL
4000
4
EDO
EDO
4000
A
EGL
5000
4
EDO
EDO
5000
A
EGL
6000
4
EDO
EDO
6000
A
WAT
1
5
HOH
HOH
6001
A
WAT
2
5
HOH
HOH
6002
A
WAT
3
5
HOH
HOH
6003
A
WAT
4
5
HOH
HOH
6004
A
WAT
5
5
HOH
HOH
6005
A
WAT
6
5
HOH
HOH
6006
A
WAT
7
5
HOH
HOH
6007
A
WAT
8
5
HOH
HOH
6008
A
WAT
9
5
HOH
HOH
6009
A
WAT
10
5
HOH
HOH
6010
A
WAT
11
5
HOH
HOH
6011
A
WAT
12
5
HOH
HOH
6012
A
WAT
13
5
HOH
HOH
6013
A
WAT
14
5
HOH
HOH
6014
A
WAT
15
5
HOH
HOH
6015
A
WAT
16
5
HOH
HOH
6016
A
WAT
17
5
HOH
HOH
6017
A
WAT
18
5
HOH
HOH
6018
A
WAT
19
5
HOH
HOH
6019
A
WAT
20
5
HOH
HOH
6020
A
WAT
21
5
HOH
HOH
6021
A
WAT
22
5
HOH
HOH
6022
A
WAT
23
5
HOH
HOH
6023
A
WAT
24
5
HOH
HOH
6024
A
WAT
25
5
HOH
HOH
6025
A
WAT
26
5
HOH
HOH
6026
A
WAT
27
5
HOH
HOH
6027
A
WAT
28
5
HOH
HOH
6028
A
WAT
29
5
HOH
HOH
6029
A
WAT
30
5
HOH
HOH
6030
A
WAT
31
5
HOH
HOH
6031
A
WAT
32
5
HOH
HOH
6032
A
WAT
33
5
HOH
HOH
6033
A
WAT
34
5
HOH
HOH
6034
A
WAT
35
5
HOH
HOH
6035
A
WAT
36
5
HOH
HOH
6036
A
WAT
37
5
HOH
HOH
6037
A
WAT
38
5
HOH
HOH
6038
A
WAT
39
5
HOH
HOH
6039
A
WAT
40
5
HOH
HOH
6040
A
WAT
41
5
HOH
HOH
6041
A
WAT
42
5
HOH
HOH
6042
A
WAT
43
5
HOH
HOH
6043
A
WAT
44
5
HOH
HOH
6044
A
WAT
45
5
HOH
HOH
6045
A
WAT
46
5
HOH
HOH
6046
A
WAT
47
5
HOH
HOH
6047
A
WAT
48
5
HOH
HOH
6048
A
WAT
49
5
HOH
HOH
6049
A
WAT
50
5
HOH
HOH
6050
A
WAT
51
5
HOH
HOH
6051
A
WAT
52
5
HOH
HOH
6052
A
WAT
53
5
HOH
HOH
6053
A
WAT
54
5
HOH
HOH
6054
A
WAT
55
5
HOH
HOH
6055
A
WAT
56
5
HOH
HOH
6056
A
WAT
57
5
HOH
HOH
6057
A
WAT
58
5
HOH
HOH
6058
A
WAT
59
5
HOH
HOH
6059
A
WAT
60
5
HOH
HOH
6060
A
WAT
61
5
HOH
HOH
6061
A
WAT
62
5
HOH
HOH
6062
A
WAT
63
5
HOH
HOH
6063
A
WAT
64
5
HOH
HOH
6064
A
WAT
65
5
HOH
HOH
6065
A
WAT
66
5
HOH
HOH
6066
A
WAT
67
5
HOH
HOH
6067
A
WAT
68
5
HOH
HOH
6068
A
WAT
69
5
HOH
HOH
6069
A
WAT
70
5
HOH
HOH
6070
A
WAT
71
5
HOH
HOH
6071
A
WAT
72
5
HOH
HOH
6072
A
WAT
73
5
HOH
HOH
6073
A
WAT
74
5
HOH
HOH
6074
A
WAT
75
5
HOH
HOH
6075
A
WAT
76
5
HOH
HOH
6076
A
WAT
77
5
HOH
HOH
6077
A
WAT
78
5
HOH
HOH
6078
A
WAT
79
5
HOH
HOH
6079
A
WAT
80
5
HOH
HOH
6080
A
WAT
81
5
HOH
HOH
6081
A
WAT
82
5
HOH
HOH
6082
A
WAT
83
5
HOH
HOH
6083
A
WAT
84
5
HOH
HOH
6084
A
WAT
85
5
HOH
HOH
6085
A
WAT
86
5
HOH
HOH
6086
A
WAT
87
5
HOH
HOH
6087
A
WAT
88
5
HOH
HOH
6088
A
WAT
89
5
HOH
HOH
6089
A
WAT
90
5
HOH
HOH
6090
A
WAT
91
5
HOH
HOH
6091
A
WAT
92
5
HOH
HOH
6092
A
WAT
93
5
HOH
HOH
6093
A
WAT
94
5
HOH
HOH
6094
A
WAT
95
5
HOH
HOH
6095
A
WAT
96
5
HOH
HOH
6096
A
WAT
97
5
HOH
HOH
6097
A
WAT
98
5
HOH
HOH
6098
A
WAT
99
5
HOH
HOH
6099
A
WAT
100
5
HOH
HOH
6100
A
WAT
101
5
HOH
HOH
6101
A
WAT
102
5
HOH
HOH
6102
A
WAT
103
5
HOH
HOH
6103
A
WAT
104
5
HOH
HOH
6104
A
WAT
105
5
HOH
HOH
6105
A
WAT
106
5
HOH
HOH
6106
A
WAT
107
5
HOH
HOH
6107
A
WAT
108
5
HOH
HOH
6108
A
WAT
109
5
HOH
HOH
6109
A
WAT
110
5
HOH
HOH
6110
A
WAT
111
5
HOH
HOH
6111
A
WAT
112
5
HOH
HOH
6112
A
WAT
113
5
HOH
HOH
6113
A
WAT
114
5
HOH
HOH
6114
A
WAT
115
5
HOH
HOH
6115
A
WAT
116
5
HOH
HOH
6116
A
WAT
117
5
HOH
HOH
6117
A
WAT
118
5
HOH
HOH
6118
A
WAT
119
5
HOH
HOH
6119
A
WAT
120
5
HOH
HOH
6120
A
WAT
121
5
HOH
HOH
6121
A
WAT
122
5
HOH
HOH
6122
A
WAT
123
5
HOH
HOH
6123
A
WAT
124
5
HOH
HOH
6124
A
WAT
125
5
HOH
HOH
6125
A
WAT
126
5
HOH
HOH
6126
A
WAT
127
5
HOH
HOH
6127
A
WAT
128
5
HOH
HOH
6128
A
WAT
129
5
HOH
HOH
6129
A
WAT
130
5
HOH
HOH
6130
A
WAT
131
5
HOH
HOH
6131
A
WAT
132
5
HOH
HOH
6132
A
WAT
133
5
HOH
HOH
6133
A
WAT
134
5
HOH
HOH
6134
A
WAT
135
5
HOH
HOH
6135
A
WAT
136
5
HOH
HOH
6136
A
WAT
137
5
HOH
HOH
6137
A
WAT
138
5
HOH
HOH
6138
A
WAT
139
5
HOH
HOH
6139
A
WAT
140
5
HOH
HOH
6140
A
WAT
141
5
HOH
HOH
6141
A
WAT
142
5
HOH
HOH
6142
A
WAT
143
5
HOH
HOH
6143
A
WAT
144
5
HOH
HOH
6144
A
WAT
145
5
HOH
HOH
6145
A
WAT
146
5
HOH
HOH
6146
A
WAT
147
5
HOH
HOH
6147
A
WAT
148
5
HOH
HOH
6148
A
WAT
149
5
HOH
HOH
6149
A
WAT
150
5
HOH
HOH
6150
A
WAT
151
5
HOH
HOH
6151
A
WAT
152
5
HOH
HOH
6152
A
WAT
153
5
HOH
HOH
6153
A
WAT
154
5
HOH
HOH
6154
A
WAT
155
5
HOH
HOH
6155
A
WAT
156
5
HOH
HOH
6156
A
WAT
157
5
HOH
HOH
6157
A
WAT
158
5
HOH
HOH
6158
A
WAT
159
5
HOH
HOH
6159
A
WAT
160
5
HOH
HOH
6160
A
WAT
161
5
HOH
HOH
6161
A
WAT
162
5
HOH
HOH
6162
A
WAT
163
5
HOH
HOH
6163
A
WAT
164
5
HOH
HOH
6164
A
WAT
165
5
HOH
HOH
6165
A
WAT
166
5
HOH
HOH
6166
A
WAT
167
5
HOH
HOH
6167
A
WAT
168
5
HOH
HOH
6168
A
WAT
169
5
HOH
HOH
6169
A
WAT
170
5
HOH
HOH
6170
A
WAT
171
5
HOH
HOH
6171
A
WAT
172
5
HOH
HOH
6172
A
WAT
173
5
HOH
HOH
6173
A
WAT
174
5
HOH
HOH
6174
A
WAT
175
5
HOH
HOH
6175
A
WAT
176
5
HOH
HOH
6176
A
WAT
178
5
HOH
HOH
6177
A
WAT
179
5
HOH
HOH
6178
A
WAT
180
5
HOH
HOH
6179
A
WAT
181
5
HOH
HOH
6180
A
WAT
182
5
HOH
HOH
6181
A
WAT
184
5
HOH
HOH
6182
A
WAT
185
5
HOH
HOH
6183
A
WAT
186
5
HOH
HOH
6184
A
WAT
188
5
HOH
HOH
6185
A
WAT
189
5
HOH
HOH
6186
A
WAT
190
5
HOH
HOH
6187
A
WAT
191
5
HOH
HOH
6188
A
WAT
192
5
HOH
HOH
6189
A
WAT
193
5
HOH
HOH
6190
A
WAT
195
5
HOH
HOH
6191
A
WAT
196
5
HOH
HOH
6192
A
WAT
197
5
HOH
HOH
6193
A
WAT
198
5
HOH
HOH
6194
A
WAT
199
5
HOH
HOH
6195
A
WAT
200
5
HOH
HOH
6196
A
WAT
201
5
HOH
HOH
6197
A
WAT
202
5
HOH
HOH
6198
A
WAT
203
5
HOH
HOH
6199
A
WAT
204
5
HOH
HOH
6200
A
WAT
205
5
HOH
HOH
6201
A
WAT
206
5
HOH
HOH
6202
A
WAT
208
5
HOH
HOH
6203
A
WAT
209
5
HOH
HOH
6204
A
WAT
210
5
HOH
HOH
6205
A
WAT
211
5
HOH
HOH
6206
A
WAT
212
5
HOH
HOH
6207
A
WAT
213
5
HOH
HOH
6208
A
WAT
214
5
HOH
HOH
6209
A
WAT
215
5
HOH
HOH
6210
A
WAT
218
5
HOH
HOH
6211
A
WAT
219
5
HOH
HOH
6212
A
WAT
220
5
HOH
HOH
6213
A
WAT
221
5
HOH
HOH
6214
A
WAT
222
5
HOH
HOH
6215
A
WAT
224
5
HOH
HOH
6216
A
WAT
225
5
HOH
HOH
6217
A
WAT
226
5
HOH
HOH
6218
A
WAT
228
5
HOH
HOH
6219
A
WAT
229
5
HOH
HOH
6220
A
WAT
230
5
HOH
HOH
6221
A
WAT
231
5
HOH
HOH
6222
A
WAT
232
5
HOH
HOH
6223
A
WAT
233
5
HOH
HOH
6224
A
WAT
235
5
HOH
HOH
6225
A
n
1
1
A
n
2
2
A
n
3
3
A
n
4
4
A
n
5
5
A
n
6
6
A
ARG
7
n
7
ARG
7
A
GLN
8
n
8
GLN
8
A
ILE
9
n
9
ILE
9
A
VAL
10
n
10
VAL
10
A
LEU
11
n
11
LEU
11
A
ASP
12
n
12
ASP
12
A
THR
13
n
13
THR
13
A
GLU
14
n
14
GLU
14
A
THR
15
n
15
THR
15
A
THR
16
n
16
THR
16
A
GLY
17
n
17
GLY
17
A
MET
18
n
18
MET
18
A
ASN
19
n
19
ASN
19
A
GLN
20
n
20
GLN
20
A
ILE
21
n
21
ILE
21
A
GLY
22
n
22
GLY
22
A
ALA
23
n
23
ALA
23
A
HIS
24
n
24
HIS
24
A
TYR
25
n
25
TYR
25
A
GLU
26
n
26
GLU
26
A
GLY
27
n
27
GLY
27
A
HIS
28
n
28
HIS
28
A
LYS
29
n
29
LYS
29
A
ILE
30
n
30
ILE
30
A
ILE
31
n
31
ILE
31
A
GLU
32
n
32
GLU
32
A
ILE
33
n
33
ILE
33
A
GLY
34
n
34
GLY
34
A
ALA
35
n
35
ALA
35
A
VAL
36
n
36
VAL
36
A
GLU
37
n
37
GLU
37
A
VAL
38
n
38
VAL
38
A
VAL
39
n
39
VAL
39
A
ASN
40
n
40
ASN
40
A
ARG
41
n
41
ARG
41
A
ALA
42
n
42
ARG
42
A
LEU
43
n
43
LEU
43
A
THR
44
n
44
THR
44
A
GLY
45
n
45
GLY
45
A
ASN
46
n
46
ASN
46
A
ASN
47
n
47
ASN
47
A
PHE
48
n
48
PHE
48
A
HIS
49
n
49
HIS
49
A
VAL
50
n
50
VAL
50
A
TYR
51
n
51
TYR
51
A
LEU
52
n
52
LEU
52
A
LYS
53
n
53
LYS
53
A
PRO
54
n
54
PRO
54
A
ASP
55
n
55
ASP
55
A
ARG
56
n
56
ARG
56
A
LEU
57
n
57
LEU
57
A
VAL
58
n
58
VAL
58
A
ASP
59
n
59
ASP
59
A
PRO
60
n
60
PRO
60
A
GLU
61
n
61
GLU
61
A
ALA
62
n
62
ALA
62
A
PHE
63
n
63
PHE
63
A
GLY
64
n
64
GLY
64
A
VAL
65
n
65
VAL
65
A
HIS
66
n
66
HIS
66
A
GLY
67
n
67
GLY
67
A
ILE
68
n
68
ILE
68
A
ALA
69
n
69
ALA
69
A
ASP
70
n
70
ASP
70
A
ALA
71
n
71
GLU
71
A
PHE
72
n
72
PHE
72
A
LEU
73
n
73
LEU
73
A
LEU
74
n
74
LEU
74
A
ASP
75
n
75
ASP
75
A
LYS
76
n
76
LYS
76
A
PRO
77
n
77
PRO
77
A
THR
78
n
78
THR
78
A
PHE
79
n
79
PHE
79
A
ALA
80
n
80
ALA
80
A
GLU
81
n
81
GLU
81
A
VAL
82
n
82
VAL
82
A
ALA
83
n
83
ALA
83
A
ASP
84
n
84
ASP
84
A
GLU
85
n
85
GLU
85
A
PHE
86
n
86
PHE
86
A
MET
87
n
87
MET
87
A
ASP
88
n
88
ASP
88
A
TYR
89
n
89
TYR
89
A
ILE
90
n
90
ILE
90
A
ARG
91
n
91
ARG
91
A
GLY
92
n
92
GLY
92
A
ALA
93
n
93
ALA
93
A
GLU
94
n
94
GLU
94
A
LEU
95
n
95
LEU
95
A
VAL
96
n
96
VAL
96
A
ILE
97
n
97
ILE
97
A
HIS
98
n
98
HIS
98
A
ASN
99
n
99
ASN
99
A
ALA
100
n
100
ALA
100
A
ALA
101
n
101
ALA
101
A
PHE
102
n
102
PHE
102
A
ASP
103
n
103
ASP
103
A
ILE
104
n
104
ILE
104
A
GLY
105
n
105
GLY
105
A
PHE
106
n
106
PHE
106
A
MET
107
n
107
MET
107
A
ASP
108
n
108
ASP
108
A
TYR
109
n
109
TYR
109
A
GLU
110
n
110
GLU
110
A
PHE
111
n
111
PHE
111
A
SER
112
n
112
SER
112
A
LEU
113
n
113
LEU
113
A
LEU
114
n
114
LEU
114
A
LYS
115
n
115
LYS
115
A
ARG
116
n
116
ARG
116
A
ASP
117
n
117
ASP
117
A
ILE
118
n
118
ILE
118
A
PRO
119
n
119
PRO
119
A
LYS
120
n
120
LYS
120
A
THR
121
n
121
THR
121
A
ASN
122
n
122
ASN
122
A
THR
123
n
123
THR
123
A
PHE
124
n
124
PHE
124
A
CYS
125
n
125
CYS
125
A
LYS
126
n
126
LYS
126
A
VAL
127
n
127
VAL
127
A
THR
128
n
128
THR
128
A
ASP
129
n
129
ASP
129
A
SER
130
n
130
SER
130
A
LEU
131
n
131
LEU
131
A
ALA
132
n
132
ALA
132
A
VAL
133
n
133
VAL
133
A
ALA
134
n
134
ALA
134
A
ARG
135
n
135
ARG
135
A
LYS
136
n
136
LYS
136
A
MET
137
n
137
MET
137
A
PHE
138
n
138
PHE
138
A
PRO
139
n
139
PRO
139
A
GLY
140
n
140
GLY
140
A
LYS
141
n
141
LYS
141
A
ARG
142
n
142
ARG
142
A
ASN
143
n
143
ASN
143
A
SER
144
n
144
SER
144
A
LEU
145
n
145
LEU
145
A
ASP
146
n
146
ASP
146
A
ALA
147
n
147
ALA
147
A
LEU
148
n
148
LEU
148
A
CYS
149
n
149
CYS
149
A
ALA
150
n
150
ALA
150
A
ARG
151
n
151
ARG
151
A
TYR
152
n
152
TYR
152
A
GLU
153
n
153
GLU
153
A
ILE
154
n
154
ILE
154
A
ASP
155
n
155
ASP
155
A
ASN
156
n
156
ASN
156
A
SER
157
n
157
SER
157
A
ALA
158
n
158
LYS
158
A
ARG
159
n
159
ARG
159
A
THR
160
n
160
THR
160
A
LEU
161
n
161
LEU
161
A
HIS
162
n
162
HIS
162
A
GLY
163
n
163
GLY
163
A
ALA
164
n
164
ALA
164
A
LEU
165
n
165
LEU
165
A
LEU
166
n
166
LEU
166
A
ASP
167
n
167
ASP
167
A
ALA
168
n
168
ALA
168
A
GLN
169
n
169
GLN
169
A
ILE
170
n
170
ILE
170
A
LEU
171
n
171
LEU
171
A
ALA
172
n
172
ALA
172
A
GLU
173
n
173
GLU
173
A
VAL
174
n
174
VAL
174
A
TYR
175
n
175
TYR
175
A
LEU
176
n
176
LEU
176
A
ALA
177
n
177
ALA
177
A
MET
178
n
178
MET
178
A
THR
179
n
179
THR
179
A
GLY
180
n
180
GLY
180
A
n
181
181
A
n
182
182
A
n
183
183
A
n
184
184
A
n
185
185
A
n
186
186
A
author_defined_assembly
1
monomeric
A
ASP
12
A
OD2
ASP
12
1_555
A
MN
3000
B
MN
MN
1_555
A
GLU
14
A
OE2
GLU
14
1_555
96.7
A
ASP
12
A
OD2
ASP
12
1_555
A
MN
3000
B
MN
MN
1_555
A
ASP
167
A
OD2
ASP
167
1_555
97.0
A
GLU
14
A
OE2
GLU
14
1_555
A
MN
3000
B
MN
MN
1_555
A
ASP
167
A
OD2
ASP
167
1_555
109.1
A
ASP
12
A
OD2
ASP
12
1_555
A
MN
3000
B
MN
MN
1_555
A
TMP
2000
A
D
O2P
TMP
1_555
163.8
A
GLU
14
A
OE2
GLU
14
1_555
A
MN
3000
B
MN
MN
1_555
A
TMP
2000
A
D
O2P
TMP
1_555
96.9
A
ASP
167
A
OD2
ASP
167
1_555
A
MN
3000
B
MN
MN
1_555
A
TMP
2000
A
D
O2P
TMP
1_555
86.8
A
ASP
12
A
OD2
ASP
12
1_555
A
MN
3000
B
MN
MN
1_555
A
TMP
2000
A
D
O3P
TMP
1_555
93.6
A
GLU
14
A
OE2
GLU
14
1_555
A
MN
3000
B
MN
MN
1_555
A
TMP
2000
A
D
O3P
TMP
1_555
131.2
A
ASP
167
A
OD2
ASP
167
1_555
A
MN
3000
B
MN
MN
1_555
A
TMP
2000
A
D
O3P
TMP
1_555
116.8
A
TMP
2000
A
D
O2P
TMP
1_555
A
MN
3000
B
MN
MN
1_555
A
TMP
2000
A
D
O3P
TMP
1_555
70.7
A
ASP
12
A
OD2
ASP
12
1_555
A
MN
3000
B
MN
MN
1_555
A
TMP
2000
B
D
O3P
TMP
1_555
97.7
A
GLU
14
A
OE2
GLU
14
1_555
A
MN
3000
B
MN
MN
1_555
A
TMP
2000
B
D
O3P
TMP
1_555
130.6
A
ASP
167
A
OD2
ASP
167
1_555
A
MN
3000
B
MN
MN
1_555
A
TMP
2000
B
D
O3P
TMP
1_555
115.6
A
TMP
2000
A
D
O2P
TMP
1_555
A
MN
3000
B
MN
MN
1_555
A
TMP
2000
B
D
O3P
TMP
1_555
66.6
A
TMP
2000
A
D
O3P
TMP
1_555
A
MN
3000
B
MN
MN
1_555
A
TMP
2000
B
D
O3P
TMP
1_555
4.1
A
ASP
12
A
OD1
ASP
12
1_555
A
MN
3001
C
MN
MN
1_555
A
TMP
2000
A
D
O3P
TMP
1_555
93.9
A
ASP
12
A
OD1
ASP
12
1_555
A
MN
3001
C
MN
MN
1_555
A
TMP
2000
B
D
O1P
TMP
1_555
169.3
A
TMP
2000
A
D
O3P
TMP
1_555
A
MN
3001
C
MN
MN
1_555
A
TMP
2000
B
D
O1P
TMP
1_555
75.5
A
ASP
12
A
OD1
ASP
12
1_555
A
MN
3001
C
MN
MN
1_555
A
TMP
2000
B
D
O3P
TMP
1_555
98.2
A
TMP
2000
A
D
O3P
TMP
1_555
A
MN
3001
C
MN
MN
1_555
A
TMP
2000
B
D
O3P
TMP
1_555
4.3
A
TMP
2000
B
D
O1P
TMP
1_555
A
MN
3001
C
MN
MN
1_555
A
TMP
2000
B
D
O3P
TMP
1_555
71.3
A
ASP
12
A
OD1
ASP
12
1_555
A
MN
3001
C
MN
MN
1_555
A
HOH
6001
H
O
HOH
1_555
85.6
A
TMP
2000
A
D
O3P
TMP
1_555
A
MN
3001
C
MN
MN
1_555
A
HOH
6001
H
O
HOH
1_555
90.3
A
TMP
2000
B
D
O1P
TMP
1_555
A
MN
3001
C
MN
MN
1_555
A
HOH
6001
H
O
HOH
1_555
92.7
A
TMP
2000
B
D
O3P
TMP
1_555
A
MN
3001
C
MN
MN
1_555
A
HOH
6001
H
O
HOH
1_555
91.0
A
ASP
12
A
OD1
ASP
12
1_555
A
MN
3001
C
MN
MN
1_555
A
HOH
6002
H
O
HOH
1_555
90.0
A
TMP
2000
A
D
O3P
TMP
1_555
A
MN
3001
C
MN
MN
1_555
A
HOH
6002
H
O
HOH
1_555
176.0
A
TMP
2000
B
D
O1P
TMP
1_555
A
MN
3001
C
MN
MN
1_555
A
HOH
6002
H
O
HOH
1_555
100.5
A
TMP
2000
B
D
O3P
TMP
1_555
A
MN
3001
C
MN
MN
1_555
A
HOH
6002
H
O
HOH
1_555
171.8
A
HOH
6001
H
O
HOH
1_555
A
MN
3001
C
MN
MN
1_555
A
HOH
6002
H
O
HOH
1_555
89.6
A
ASP
12
A
OD1
ASP
12
1_555
A
MN
3001
C
MN
MN
1_555
A
HOH
6003
H
O
HOH
1_555
87.2
A
TMP
2000
A
D
O3P
TMP
1_555
A
MN
3001
C
MN
MN
1_555
A
HOH
6003
H
O
HOH
1_555
91.0
A
TMP
2000
B
D
O1P
TMP
1_555
A
MN
3001
C
MN
MN
1_555
A
HOH
6003
H
O
HOH
1_555
94.5
A
TMP
2000
B
D
O3P
TMP
1_555
A
MN
3001
C
MN
MN
1_555
A
HOH
6003
H
O
HOH
1_555
90.8
A
HOH
6001
H
O
HOH
1_555
A
MN
3001
C
MN
MN
1_555
A
HOH
6003
H
O
HOH
1_555
172.8
A
HOH
6002
H
O
HOH
1_555
A
MN
3001
C
MN
MN
1_555
A
HOH
6003
H
O
HOH
1_555
89.6
A
ASP
12
A
OD1
ASP
12
1_555
A
MN
3001
C
MN
MN
1_555
A
HOH
6004
H
O
HOH
1_555
173.9
A
TMP
2000
A
D
O3P
TMP
1_555
A
MN
3001
C
MN
MN
1_555
A
HOH
6004
H
O
HOH
1_555
91.9
A
TMP
2000
B
D
O1P
TMP
1_555
A
MN
3001
C
MN
MN
1_555
A
HOH
6004
H
O
HOH
1_555
16.8
A
TMP
2000
B
D
O3P
TMP
1_555
A
MN
3001
C
MN
MN
1_555
A
HOH
6004
H
O
HOH
1_555
87.6
A
HOH
6001
H
O
HOH
1_555
A
MN
3001
C
MN
MN
1_555
A
HOH
6004
H
O
HOH
1_555
96.3
A
HOH
6002
H
O
HOH
1_555
A
MN
3001
C
MN
MN
1_555
A
HOH
6004
H
O
HOH
1_555
84.2
A
HOH
6003
H
O
HOH
1_555
A
MN
3001
C
MN
MN
1_555
A
HOH
6004
H
O
HOH
1_555
90.8
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
LYS
126
A
O
LYS
126
A
N
LEU
95
A
N
LEU
95
A
O
VAL
96
A
O
VAL
96
A
N
ILE
9
A
N
ILE
9
A
N
GLN
8
A
N
GLN
8
A
O
VAL
38
A
O
VAL
38
A
N
VAL
39
A
N
VAL
39
A
O
ARG
42
A
O
ARG
42
A
O
LYS
126
A
O
LYS
126
A
N
LEU
95
A
N
LEU
95
A
O
VAL
96
A
O
VAL
96
A
N
ILE
9
A
N
ILE
9
A
N
GLN
8
A
N
GLN
8
A
O
VAL
38
A
O
VAL
38
A
N
ILE
33
A
N
ILE
33
A
O
VAL
50
A
O
VAL
50
1
A
HOH
6178
H
HOH
1
A
HOH
6184
H
HOH
1
A
HOH
6204
H
HOH
1
A
HOH
6207
H
HOH
1
A
CG
ARG
42
A
CG
ARG
42
1
Y
1
A
CD
ARG
42
A
CD
ARG
42
1
Y
1
A
NE
ARG
42
A
NE
ARG
42
1
Y
1
A
CZ
ARG
42
A
CZ
ARG
42
1
Y
1
A
NH1
ARG
42
A
NH1
ARG
42
1
Y
1
A
NH2
ARG
42
A
NH2
ARG
42
1
Y
1
A
CG
GLU
71
A
CG
GLU
71
1
Y
1
A
CD
GLU
71
A
CD
GLU
71
1
Y
1
A
OE1
GLU
71
A
OE1
GLU
71
1
Y
1
A
OE2
GLU
71
A
OE2
GLU
71
1
Y
1
A
CG
LYS
158
A
CG
LYS
158
1
Y
1
A
CD
LYS
158
A
CD
LYS
158
1
Y
1
A
CE
LYS
158
A
CE
LYS
158
1
Y
1
A
NZ
LYS
158
A
NZ
LYS
158
1
Y
1
A
MET
1
A
MET
1
1
Y
1
A
SER
2
A
SER
2
1
Y
1
A
THR
3
A
THR
3
1
Y
1
A
ALA
4
A
ALA
4
1
Y
1
A
ILE
5
A
ILE
5
1
Y
1
A
THR
6
A
THR
6
1
Y
1
A
GLY
181
A
GLY
181
1
Y
1
A
GLN
182
A
GLN
182
1
Y
1
A
THR
183
A
THR
183
1
Y
1
A
SER
184
A
SER
184
1
Y
1
A
MET
185
A
MET
185
1
Y
1
A
ALA
186
A
ALA
186
1
Y
1
A
ASN
99
76.18
54.57
1
A
ASN
122
-69.92
4.10
1
A
ARG
159
-104.05
41.86
maximum likelihood target refinements (positional, individual B-factor,
and simulated annealing using standard CNS scripts)
0.2340000
0.2010000
1.7
50.0
1179
22457
94.9
1
0
0
Engh & Huber
1.7
50.0
225
1641
56
0
1360
0.006
1.339
1.7
50.0
1J54
22532
0
0
0.0490000
1
9.0
18.8
94.9
0.1520000
1.70
1.76
1813
78.0
data reduction
DENZO
data scaling
SCALEPACK
model building
CCP4
refinement
CNS
phasing
CCP4
Structure of the N-terminal exonuclease domain of the epsilon subunit of E.coli DNA polymerase III at pH 5.8
1
N
N
2
N
N
2
N
N
3
N
N
4
N
N
4
N
N
4
N
N
5
N
N
A
ASP
59
A
ASP
59
HELX_P
A
GLY
67
A
GLY
67
1
1
9
A
ALA
69
A
ALA
69
HELX_P
A
LEU
74
A
LEU
74
1
2
6
A
THR
78
A
THR
78
HELX_P
A
ARG
91
A
ARG
91
1
3
14
A
ALA
100
A
ALA
100
HELX_P
A
LEU
114
A
LEU
114
1
4
15
A
LYS
120
A
LYS
120
HELX_P
A
PHE
124
A
PHE
124
5
5
5
A
SER
130
A
SER
130
HELX_P
A
PHE
138
A
PHE
138
1
6
9
A
SER
144
A
SER
144
HELX_P
A
TYR
152
A
TYR
152
1
7
9
A
GLY
163
A
GLY
163
HELX_P
A
THR
179
A
THR
179
1
8
17
metalc
2.163
A
ASP
12
A
OD2
ASP
12
1_555
A
MN
3000
B
MN
MN
1_555
metalc
2.035
A
ASP
12
A
OD1
ASP
12
1_555
A
MN
3001
C
MN
MN
1_555
metalc
2.073
A
GLU
14
A
OE2
GLU
14
1_555
A
MN
3000
B
MN
MN
1_555
metalc
2.090
A
ASP
167
A
OD2
ASP
167
1_555
A
MN
3000
B
MN
MN
1_555
metalc
2.507
A
A
TMP
2000
D
O2P
TMP
1_555
A
MN
3000
B
MN
MN
1_555
metalc
2.063
A
A
TMP
2000
D
O3P
TMP
1_555
A
MN
3000
B
MN
MN
1_555
metalc
2.149
B
A
TMP
2000
D
O3P
TMP
1_555
A
MN
3000
B
MN
MN
1_555
metalc
2.085
A
A
TMP
2000
D
O3P
TMP
1_555
A
MN
3001
C
MN
MN
1_555
metalc
2.432
B
A
TMP
2000
D
O1P
TMP
1_555
A
MN
3001
C
MN
MN
1_555
metalc
2.157
B
A
TMP
2000
D
O3P
TMP
1_555
A
MN
3001
C
MN
MN
1_555
metalc
2.166
A
MN
3001
C
MN
MN
1_555
A
HOH
6001
H
O
HOH
1_555
metalc
2.157
A
MN
3001
C
MN
MN
1_555
A
HOH
6002
H
O
HOH
1_555
metalc
2.234
A
MN
3001
C
MN
MN
1_555
A
HOH
6003
H
O
HOH
1_555
metalc
2.375
A
MN
3001
C
MN
MN
1_555
A
HOH
6004
H
O
HOH
1_555
TRANSFERASE
DNA polymerase proofreading domain, TRANSFERASE
DPO3E_ECOLI
UNP
1
1
P03007
MSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLTGNNFHVYLKPDRLVDPEAFGVHGIADEFLLDKPTFA
EVADEFMDYIRGAELVIHNAAFDIGFMDYEFSLLKRDIPKTNTFCKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRT
LHGALLDAQILAEVYLAMTGGQTSMA
1
186
1J54
1
186
P03007
A
1
1
186
5
5
parallel
parallel
anti-parallel
anti-parallel
parallel
parallel
anti-parallel
anti-parallel
A
LYS
126
A
LYS
126
A
ASP
129
A
ASP
129
A
GLU
94
A
GLU
94
A
ILE
97
A
ILE
97
A
GLN
8
A
GLN
8
A
THR
15
A
THR
15
A
ILE
30
A
ILE
30
A
VAL
39
A
VAL
39
A
ARG
42
A
ARG
42
A
LEU
43
A
LEU
43
A
LYS
126
A
LYS
126
A
ASP
129
A
ASP
129
A
GLU
94
A
GLU
94
A
ILE
97
A
ILE
97
A
GLN
8
A
GLN
8
A
THR
15
A
THR
15
A
ILE
30
A
ILE
30
A
VAL
39
A
VAL
39
A
PHE
48
A
PHE
48
A
TYR
51
A
TYR
51
BINDING SITE FOR RESIDUE MN A 3000
A
MN
3000
Software
4
BINDING SITE FOR RESIDUE MN A 3001
A
MN
3001
Software
6
BINDING SITE FOR RESIDUE TMP A 2000
A
TMP
2000
Software
20
BINDING SITE FOR RESIDUE EDO A 4000
A
EDO
4000
Software
1
BINDING SITE FOR RESIDUE EDO A 5000
A
EDO
5000
Software
1
BINDING SITE FOR RESIDUE EDO A 6000
A
EDO
6000
Software
3
A
ASP
12
A
ASP
12
4
1_555
A
GLU
14
A
GLU
14
4
1_555
A
ASP
167
A
ASP
167
4
1_555
A
TMP
2000
D
TMP
4
1_555
A
ASP
12
A
ASP
12
6
1_555
A
TMP
2000
D
TMP
6
1_555
A
HOH
6001
H
HOH
6
1_555
A
HOH
6002
H
HOH
6
1_555
A
HOH
6003
H
HOH
6
1_555
A
HOH
6004
H
HOH
6
1_555
A
ASP
12
A
ASP
12
20
1_555
A
THR
13
A
THR
13
20
1_555
A
GLU
14
A
GLU
14
20
1_555
A
THR
15
A
THR
15
20
1_555
A
MET
18
A
MET
18
20
1_555
A
GLU
61
A
GLU
61
20
1_555
A
VAL
65
A
VAL
65
20
1_555
A
HIS
66
A
HIS
66
20
1_555
A
PHE
102
A
PHE
102
20
1_555
A
HIS
162
A
HIS
162
20
1_555
A
ASP
167
A
ASP
167
20
1_555
A
MN
3000
B
MN
20
1_555
A
MN
3001
C
MN
20
1_555
A
EDO
6000
G
EDO
20
1_555
A
HOH
6001
H
HOH
20
1_555
A
HOH
6003
H
HOH
20
1_555
A
HOH
6004
H
HOH
20
1_555
A
HOH
6035
H
HOH
20
1_555
A
HOH
6145
H
HOH
20
1_555
A
HOH
6170
H
HOH
20
1_555
A
THR
123
A
THR
123
1
1_555
A
ARG
7
A
ARG
7
1
1_555
A
MET
18
A
MET
18
3
1_555
A
PHE
102
A
PHE
102
3
1_555
A
TMP
2000
D
TMP
3
1_555
92
P 41 21 2