1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Liepinsh, E. Otting, G. Harding, M.M. Ward, L.G. Mackay, J.P. Haymet, A.D. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking H2 N 16.023 AMINO GROUP non-polymer C3 H7 N O3 105.093 y SERINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N O N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N N N 94 S C N 95 N C N 96 N O N 97 N C N 98 N C N 99 N C N 100 N C N 101 N O N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N N N 116 S C N 117 N C N 118 N O N 119 N C N 120 N C N 121 N C N 122 N C N 123 N N N 124 N O N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N N N 141 N H N 142 N H N 143 N N N 144 S C N 145 N C N 146 N O N 147 N C N 148 N O N 149 N O N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N N N 158 S C N 159 N C N 160 N O N 161 N C N 162 N C N 163 N C N 164 N O N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N doub N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N doub N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N doub N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N doub N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing IX Eur.J.Biochem. EJBCAI 0262 0014-2956 269 1259 1266 10.1046/j.1432-1033.2002.02766.x 11856360 Solution structure of a hydrophobic analogue of the winter flounder antifreeze protein. 2002 10.2210/pdb1j5b/pdb pdb_00001j5b 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 SINGLE WAVELENGTH M 1 1.0 3466.874 Antifreeze protein type 1 analogue T(2,13,24,35)V, A(7,29)K, A(11,33)E 1 syn polymer no yes DVASDAKAAAELVAANAKAAAELVAANAKAAAEAVAR(NH2) DVASDAKAAAELVAANAKAAAELVAANAKAAAEAVARX A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n database_2 pdbx_struct_assembly pdbx_struct_oper_list struct_conn struct_site chem_comp_atom chem_comp_bond repository Initial release Version format compliance Version format compliance Database references Derived calculations Data collection 1 0 2002-03-27 1 1 2008-04-26 1 2 2011-07-13 1 3 2022-02-23 1 4 2023-12-27 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_leaving_atom_flag _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id 2002-03-27 SPRSDE RCSB Y RCSB 2002-03-22 REL THIS PEPTIDE WAS CHEMICALLY SYNTHESIZED. THE SEQUENCE OF THIS PEPTIDE OCCURS NATURALLY IN PSEUDOPLEURONECTES AMERICANUS (WINTER FLOUNDER). sample This structure was determined using standard 2D homonuclear techniques structures with the least restraint violations,structures with the lowest energy,target function 50 20 2D 1H-1H NOESY DQF-COSY 2D 1H-1H TOCSY 2D 1H-1H ROESY 2D 1H-1H NOESY 0.1 7.0 ambient 283 K 0.1 7.0 ambient 283 K torsion angle dynamics, molecular dynamics 1 minimized average structure 2 mM peptide; 90% H2O, 10% D2O 90% H2O/10% D2O 2 mM peptide; 90% H2O, 10% D2O 90% H2O/10% D2O Bruker processing UXNMR 2.5 Guentert refinement DYANA 1.5 Lginbuehl refinement OPAL 2.6 Bartels data analysis XEASY 2.2 Koradi data analysis MOLMOL 1 600 Bruker DMX 800 Varian INOVA ASP 1 n 1 ASP 1 A VAL 2 n 2 VAL 2 A ALA 3 n 3 ALA 3 A SER 4 n 4 SER 4 A ASP 5 n 5 ASP 5 A ALA 6 n 6 ALA 6 A LYS 7 n 7 LYS 7 A ALA 8 n 8 ALA 8 A ALA 9 n 9 ALA 9 A ALA 10 n 10 ALA 10 A GLU 11 n 11 GLU 11 A LEU 12 n 12 LEU 12 A VAL 13 n 13 VAL 13 A ALA 14 n 14 ALA 14 A ALA 15 n 15 ALA 15 A ASN 16 n 16 ASN 16 A ALA 17 n 17 ALA 17 A LYS 18 n 18 LYS 18 A ALA 19 n 19 ALA 19 A ALA 20 n 20 ALA 20 A ALA 21 n 21 ALA 21 A GLU 22 n 22 GLU 22 A LEU 23 n 23 LEU 23 A VAL 24 n 24 VAL 24 A ALA 25 n 25 ALA 25 A ALA 26 n 26 ALA 26 A ASN 27 n 27 ASN 27 A ALA 28 n 28 ALA 28 A LYS 29 n 29 LYS 29 A ALA 30 n 30 ALA 30 A ALA 31 n 31 ALA 31 A ALA 32 n 32 ALA 32 A GLU 33 n 33 GLU 33 A ALA 34 n 34 ALA 34 A VAL 35 n 35 VAL 35 A ALA 36 n 36 ALA 36 A ARG 37 n 37 ARG 37 A NH2 38 n 38 NH2 38 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 minimized average Solution structure of a hydrophobic analogue of the winter flounder antifreeze protein 1 N N A ASP 1 A ASP 1 HELX_P A ARG 37 A ARG 37 1 1 37 covale 1.331 both A ARG 37 A C ARG 37 1_555 A NH2 38 A N NH2 38 1_555 ANTIFREEZE PROTEIN alpha helix, ANTIFREEZE PROTEIN Q7SIC4_PSEAM UNP 1 1 Q7SIC4 1 37 1J5B 1 37 Q7SIC4 A 1 1 37 BINDING SITE FOR RESIDUE NH2 A 38 A NH2 38 Software 3 A VAL 35 A VAL 35 3 1_555 A ALA 36 A ALA 36 3 1_555 A ARG 37 A ARG 37 3 1_555