0.015291
0.000000
0.000000
0.000000
0.015106
0.000000
0.000000
0.000000
0.007037
0.00000
0.00000
0.00000
Joint Center for Structural Genomics (JCSG)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90
90
90
65.4
66.2
142.1
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be published
0353
Crystal structure of Glycyl-tRNA synthetase alpha chain (TM0216) from Thermotoga maritima at 1.95 A resolution
10.2210/pdb1j5w/pdb
pdb_00001j5w
100.0
1
CCD
2001-07-01
ADSC QUANTUM 315
DOUBLE CRYSTAL MONOCHROMATOR
MAD
M
x-ray
1
0.925224
1.0
0.979148
1.0
0.979360
1.0
BL9-2
SSRL
0.925224, 0.979148, 0.979360
SYNCHROTRON
SSRL BEAMLINE BL9-2
35362.684
Glycyl-tRNA synthetase alpha chain
6.1.1.14
2
man
polymer
18.015
water
255
nat
water
Glycine--tRNA ligase alpha chain, GlyRS
no
yes
(MSE)GSDKIHHHHHH(MSE)YLQDVI(MSE)KLNDFWASKGCLLEQPYD(MSE)EVGAGTFHPATFFGSLRKGPWKVAY
VQPSRRPTDGRYGENPNRLQRYFQYQVIIKPSPENSQELYLESLEYLGINLKEHDIRFVEDNWESPTLGAWGVGWEVWLD
G(MSE)EITQFTYFQQIGGISLKDIPLEITYGLERIA(MSE)YLQGVDNVYEVQWNENVKYGDVFLENEREFSVFNFEEA
NVGLLFRHFDEYEKEFYRLVEKNLYLPAYDYILKCSHTFNLLDARGAISVSQRQTYVKRIQA(MSE)ARKAARVFLEVQA
NENSPA
MGSDKIHHHHHHMYLQDVIMKLNDFWASKGCLLEQPYDMEVGAGTFHPATFFGSLRKGPWKVAYVQPSRRPTDGRYGENP
NRLQRYFQYQVIIKPSPENSQELYLESLEYLGINLKEHDIRFVEDNWESPTLGAWGVGWEVWLDGMEITQFTYFQQIGGI
SLKDIPLEITYGLERIAMYLQGVDNVYEVQWNENVKYGDVFLENEREFSVFNFEEANVGLLFRHFDEYEKEFYRLVEKNL
YLPAYDYILKCSHTFNLLDARGAISVSQRQTYVKRIQAMARKAARVFLEVQANENSPA
A,B
282096
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Thermotoga
Escherichia
sample
TM0216
2336
Thermotoga maritima
562
Escherichia coli
plasmid
1
2.27
45.49
7.50
30% (v/v)1,2-propanediol, 0.1 M HEPES pH 7.5, 20% (v/v)PEG-400, VAPOR DIFFUSION, SITTING DROP, NANODROP, temperature 293K, pH 7.50
293
Joint Center for Structural Genomics
JCSG
PSI, Protein Structure Initiative
pdbx_database_related
database_2
struct_conn
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Database references
Derived calculations
1
0
2002-07-17
1
1
2008-04-26
1
2
2011-07-13
1
3
2018-07-18
1
4
2023-01-25
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_leaving_atom_flag
_struct_ref_seq_dif.details
Y
RCSB
Y
RCSB
2002-07-05
REL
REL
HOH
water
HOH
5
2
HOH
HOH
287
A
HOH
9
2
HOH
HOH
288
A
HOH
10
2
HOH
HOH
289
A
HOH
11
2
HOH
HOH
290
A
HOH
12
2
HOH
HOH
291
A
HOH
13
2
HOH
HOH
292
A
HOH
17
2
HOH
HOH
293
A
HOH
18
2
HOH
HOH
294
A
HOH
19
2
HOH
HOH
295
A
HOH
24
2
HOH
HOH
296
A
HOH
26
2
HOH
HOH
297
A
HOH
29
2
HOH
HOH
298
A
HOH
30
2
HOH
HOH
299
A
HOH
31
2
HOH
HOH
300
A
HOH
34
2
HOH
HOH
301
A
HOH
35
2
HOH
HOH
302
A
HOH
39
2
HOH
HOH
303
A
HOH
47
2
HOH
HOH
304
A
HOH
48
2
HOH
HOH
305
A
HOH
51
2
HOH
HOH
306
A
HOH
52
2
HOH
HOH
307
A
HOH
56
2
HOH
HOH
308
A
HOH
57
2
HOH
HOH
309
A
HOH
58
2
HOH
HOH
310
A
HOH
59
2
HOH
HOH
311
A
HOH
60
2
HOH
HOH
312
A
HOH
62
2
HOH
HOH
313
A
HOH
63
2
HOH
HOH
314
A
HOH
64
2
HOH
HOH
315
A
HOH
66
2
HOH
HOH
316
A
HOH
69
2
HOH
HOH
317
A
HOH
70
2
HOH
HOH
318
A
HOH
71
2
HOH
HOH
319
A
HOH
74
2
HOH
HOH
320
A
HOH
75
2
HOH
HOH
321
A
HOH
80
2
HOH
HOH
322
A
HOH
81
2
HOH
HOH
323
A
HOH
84
2
HOH
HOH
324
A
HOH
85
2
HOH
HOH
325
A
HOH
86
2
HOH
HOH
326
A
HOH
87
2
HOH
HOH
327
A
HOH
94
2
HOH
HOH
328
A
HOH
99
2
HOH
HOH
329
A
HOH
103
2
HOH
HOH
330
A
HOH
105
2
HOH
HOH
331
A
HOH
107
2
HOH
HOH
332
A
HOH
108
2
HOH
HOH
333
A
HOH
109
2
HOH
HOH
334
A
HOH
110
2
HOH
HOH
335
A
HOH
112
2
HOH
HOH
336
A
HOH
113
2
HOH
HOH
337
A
HOH
119
2
HOH
HOH
338
A
HOH
120
2
HOH
HOH
339
A
HOH
121
2
HOH
HOH
340
A
HOH
124
2
HOH
HOH
341
A
HOH
125
2
HOH
HOH
342
A
HOH
126
2
HOH
HOH
343
A
HOH
128
2
HOH
HOH
344
A
HOH
129
2
HOH
HOH
345
A
HOH
130
2
HOH
HOH
346
A
HOH
133
2
HOH
HOH
347
A
HOH
136
2
HOH
HOH
348
A
HOH
140
2
HOH
HOH
349
A
HOH
141
2
HOH
HOH
350
A
HOH
142
2
HOH
HOH
351
A
HOH
143
2
HOH
HOH
352
A
HOH
144
2
HOH
HOH
353
A
HOH
146
2
HOH
HOH
354
A
HOH
147
2
HOH
HOH
355
A
HOH
148
2
HOH
HOH
356
A
HOH
149
2
HOH
HOH
357
A
HOH
150
2
HOH
HOH
358
A
HOH
151
2
HOH
HOH
359
A
HOH
152
2
HOH
HOH
360
A
HOH
155
2
HOH
HOH
361
A
HOH
162
2
HOH
HOH
362
A
HOH
164
2
HOH
HOH
363
A
HOH
167
2
HOH
HOH
364
A
HOH
172
2
HOH
HOH
365
A
HOH
173
2
HOH
HOH
366
A
HOH
177
2
HOH
HOH
367
A
HOH
178
2
HOH
HOH
368
A
HOH
179
2
HOH
HOH
369
A
HOH
182
2
HOH
HOH
370
A
HOH
185
2
HOH
HOH
371
A
HOH
186
2
HOH
HOH
372
A
HOH
190
2
HOH
HOH
373
A
HOH
193
2
HOH
HOH
374
A
HOH
196
2
HOH
HOH
375
A
HOH
197
2
HOH
HOH
376
A
HOH
199
2
HOH
HOH
377
A
HOH
200
2
HOH
HOH
378
A
HOH
202
2
HOH
HOH
379
A
HOH
210
2
HOH
HOH
380
A
HOH
213
2
HOH
HOH
381
A
HOH
214
2
HOH
HOH
382
A
HOH
215
2
HOH
HOH
383
A
HOH
217
2
HOH
HOH
384
A
HOH
219
2
HOH
HOH
385
A
HOH
221
2
HOH
HOH
386
A
HOH
223
2
HOH
HOH
387
A
HOH
228
2
HOH
HOH
388
A
HOH
229
2
HOH
HOH
389
A
HOH
231
2
HOH
HOH
390
A
HOH
233
2
HOH
HOH
391
A
HOH
237
2
HOH
HOH
392
A
HOH
238
2
HOH
HOH
393
A
HOH
241
2
HOH
HOH
394
A
HOH
246
2
HOH
HOH
395
A
HOH
247
2
HOH
HOH
396
A
HOH
248
2
HOH
HOH
397
A
HOH
250
2
HOH
HOH
398
A
HOH
251
2
HOH
HOH
399
A
HOH
253
2
HOH
HOH
400
A
HOH
254
2
HOH
HOH
401
A
HOH
1
2
HOH
HOH
287
B
HOH
2
2
HOH
HOH
288
B
HOH
3
2
HOH
HOH
289
B
HOH
4
2
HOH
HOH
290
B
HOH
6
2
HOH
HOH
291
B
HOH
7
2
HOH
HOH
292
B
HOH
8
2
HOH
HOH
293
B
HOH
14
2
HOH
HOH
294
B
HOH
15
2
HOH
HOH
295
B
HOH
16
2
HOH
HOH
296
B
HOH
20
2
HOH
HOH
297
B
HOH
21
2
HOH
HOH
298
B
HOH
22
2
HOH
HOH
299
B
HOH
23
2
HOH
HOH
300
B
HOH
25
2
HOH
HOH
301
B
HOH
27
2
HOH
HOH
302
B
HOH
28
2
HOH
HOH
303
B
HOH
32
2
HOH
HOH
304
B
HOH
33
2
HOH
HOH
305
B
HOH
36
2
HOH
HOH
306
B
HOH
37
2
HOH
HOH
307
B
HOH
38
2
HOH
HOH
308
B
HOH
40
2
HOH
HOH
309
B
HOH
41
2
HOH
HOH
310
B
HOH
42
2
HOH
HOH
311
B
HOH
43
2
HOH
HOH
312
B
HOH
44
2
HOH
HOH
313
B
HOH
45
2
HOH
HOH
314
B
HOH
46
2
HOH
HOH
315
B
HOH
49
2
HOH
HOH
316
B
HOH
50
2
HOH
HOH
317
B
HOH
53
2
HOH
HOH
318
B
HOH
54
2
HOH
HOH
319
B
HOH
55
2
HOH
HOH
320
B
HOH
61
2
HOH
HOH
321
B
HOH
65
2
HOH
HOH
322
B
HOH
67
2
HOH
HOH
323
B
HOH
68
2
HOH
HOH
324
B
HOH
72
2
HOH
HOH
325
B
HOH
73
2
HOH
HOH
326
B
HOH
76
2
HOH
HOH
327
B
HOH
77
2
HOH
HOH
328
B
HOH
78
2
HOH
HOH
329
B
HOH
79
2
HOH
HOH
330
B
HOH
82
2
HOH
HOH
331
B
HOH
83
2
HOH
HOH
332
B
HOH
88
2
HOH
HOH
333
B
HOH
89
2
HOH
HOH
334
B
HOH
90
2
HOH
HOH
335
B
HOH
91
2
HOH
HOH
336
B
HOH
92
2
HOH
HOH
337
B
HOH
93
2
HOH
HOH
338
B
HOH
95
2
HOH
HOH
339
B
HOH
96
2
HOH
HOH
340
B
HOH
97
2
HOH
HOH
341
B
HOH
98
2
HOH
HOH
342
B
HOH
100
2
HOH
HOH
343
B
HOH
101
2
HOH
HOH
344
B
HOH
102
2
HOH
HOH
345
B
HOH
104
2
HOH
HOH
346
B
HOH
106
2
HOH
HOH
347
B
HOH
111
2
HOH
HOH
348
B
HOH
114
2
HOH
HOH
349
B
HOH
115
2
HOH
HOH
350
B
HOH
116
2
HOH
HOH
351
B
HOH
117
2
HOH
HOH
352
B
HOH
118
2
HOH
HOH
353
B
HOH
122
2
HOH
HOH
354
B
HOH
123
2
HOH
HOH
355
B
HOH
127
2
HOH
HOH
356
B
HOH
131
2
HOH
HOH
357
B
HOH
132
2
HOH
HOH
358
B
HOH
134
2
HOH
HOH
359
B
HOH
135
2
HOH
HOH
360
B
HOH
137
2
HOH
HOH
361
B
HOH
138
2
HOH
HOH
362
B
HOH
139
2
HOH
HOH
363
B
HOH
145
2
HOH
HOH
364
B
HOH
153
2
HOH
HOH
365
B
HOH
154
2
HOH
HOH
366
B
HOH
156
2
HOH
HOH
367
B
HOH
157
2
HOH
HOH
368
B
HOH
158
2
HOH
HOH
369
B
HOH
159
2
HOH
HOH
370
B
HOH
160
2
HOH
HOH
371
B
HOH
161
2
HOH
HOH
372
B
HOH
163
2
HOH
HOH
373
B
HOH
165
2
HOH
HOH
374
B
HOH
166
2
HOH
HOH
375
B
HOH
168
2
HOH
HOH
376
B
HOH
169
2
HOH
HOH
377
B
HOH
170
2
HOH
HOH
378
B
HOH
171
2
HOH
HOH
379
B
HOH
174
2
HOH
HOH
380
B
HOH
175
2
HOH
HOH
381
B
HOH
176
2
HOH
HOH
382
B
HOH
180
2
HOH
HOH
383
B
HOH
181
2
HOH
HOH
384
B
HOH
183
2
HOH
HOH
385
B
HOH
184
2
HOH
HOH
386
B
HOH
187
2
HOH
HOH
387
B
HOH
188
2
HOH
HOH
388
B
HOH
189
2
HOH
HOH
389
B
HOH
191
2
HOH
HOH
390
B
HOH
192
2
HOH
HOH
391
B
HOH
194
2
HOH
HOH
392
B
HOH
195
2
HOH
HOH
393
B
HOH
198
2
HOH
HOH
394
B
HOH
201
2
HOH
HOH
395
B
HOH
203
2
HOH
HOH
396
B
HOH
204
2
HOH
HOH
397
B
HOH
205
2
HOH
HOH
398
B
HOH
206
2
HOH
HOH
399
B
HOH
207
2
HOH
HOH
400
B
HOH
208
2
HOH
HOH
401
B
HOH
209
2
HOH
HOH
402
B
HOH
211
2
HOH
HOH
403
B
HOH
212
2
HOH
HOH
404
B
HOH
216
2
HOH
HOH
405
B
HOH
218
2
HOH
HOH
406
B
HOH
220
2
HOH
HOH
407
B
HOH
222
2
HOH
HOH
408
B
HOH
224
2
HOH
HOH
409
B
HOH
225
2
HOH
HOH
410
B
HOH
226
2
HOH
HOH
411
B
HOH
227
2
HOH
HOH
412
B
HOH
230
2
HOH
HOH
413
B
HOH
232
2
HOH
HOH
414
B
HOH
234
2
HOH
HOH
415
B
HOH
235
2
HOH
HOH
416
B
HOH
236
2
HOH
HOH
417
B
HOH
239
2
HOH
HOH
418
B
HOH
240
2
HOH
HOH
419
B
HOH
242
2
HOH
HOH
420
B
HOH
243
2
HOH
HOH
421
B
HOH
244
2
HOH
HOH
422
B
HOH
245
2
HOH
HOH
423
B
HOH
252
2
HOH
HOH
424
B
HOH
256
2
HOH
HOH
425
B
HOH
259
2
HOH
HOH
426
B
n
1
-11
A
n
2
-10
A
n
3
-9
A
n
4
-8
A
n
5
-7
A
n
6
-6
A
n
7
-5
A
n
8
-4
A
n
9
-3
A
n
10
-2
A
n
11
-1
A
n
12
0
A
MSE
1
n
13
MSE
1
A
TYR
2
n
14
TYR
2
A
LEU
3
n
15
LEU
3
A
GLN
4
n
16
GLN
4
A
ASP
5
n
17
ASP
5
A
VAL
6
n
18
VAL
6
A
ILE
7
n
19
ILE
7
A
MSE
8
n
20
MSE
8
A
LYS
9
n
21
LYS
9
A
LEU
10
n
22
LEU
10
A
ASN
11
n
23
ASN
11
A
ASP
12
n
24
ASP
12
A
PHE
13
n
25
PHE
13
A
TRP
14
n
26
TRP
14
A
ALA
15
n
27
ALA
15
A
SER
16
n
28
SER
16
A
LYS
17
n
29
LYS
17
A
GLY
18
n
30
GLY
18
A
CYS
19
n
31
CYS
19
A
LEU
20
n
32
LEU
20
A
LEU
21
n
33
LEU
21
A
GLU
22
n
34
GLU
22
A
GLN
23
n
35
GLN
23
A
PRO
24
n
36
PRO
24
A
TYR
25
n
37
TYR
25
A
ASP
26
n
38
ASP
26
A
MSE
27
n
39
MSE
27
A
GLU
28
n
40
GLU
28
A
VAL
29
n
41
VAL
29
A
GLY
30
n
42
GLY
30
A
ALA
31
n
43
ALA
31
A
GLY
32
n
44
GLY
32
A
THR
33
n
45
THR
33
A
PHE
34
n
46
PHE
34
A
HIS
35
n
47
HIS
35
A
PRO
36
n
48
PRO
36
A
ALA
37
n
49
ALA
37
A
THR
38
n
50
THR
38
A
PHE
39
n
51
PHE
39
A
PHE
40
n
52
PHE
40
A
GLY
41
n
53
GLY
41
A
SER
42
n
54
SER
42
A
LEU
43
n
55
LEU
43
A
ARG
44
n
56
ARG
44
A
LYS
45
n
57
LYS
45
A
GLY
46
n
58
GLY
46
A
PRO
47
n
59
PRO
47
A
TRP
48
n
60
TRP
48
A
LYS
49
n
61
LYS
49
A
VAL
50
n
62
VAL
50
A
ALA
51
n
63
ALA
51
A
TYR
52
n
64
TYR
52
A
VAL
53
n
65
VAL
53
A
GLN
54
n
66
GLN
54
A
PRO
55
n
67
PRO
55
A
SER
56
n
68
SER
56
A
ARG
57
n
69
ARG
57
A
ARG
58
n
70
ARG
58
A
PRO
59
n
71
PRO
59
A
THR
60
n
72
THR
60
A
n
73
61
A
n
74
62
A
n
75
63
A
n
76
64
A
n
77
65
A
GLU
66
n
78
GLU
66
A
ASN
67
n
79
ASN
67
A
PRO
68
n
80
PRO
68
A
ASN
69
n
81
ASN
69
A
ARG
70
n
82
ARG
70
A
LEU
71
n
83
LEU
71
A
GLN
72
n
84
GLN
72
A
ARG
73
n
85
ARG
73
A
TYR
74
n
86
TYR
74
A
PHE
75
n
87
PHE
75
A
GLN
76
n
88
GLN
76
A
TYR
77
n
89
TYR
77
A
GLN
78
n
90
GLN
78
A
VAL
79
n
91
VAL
79
A
ILE
80
n
92
ILE
80
A
ILE
81
n
93
ILE
81
A
LYS
82
n
94
LYS
82
A
PRO
83
n
95
PRO
83
A
SER
84
n
96
SER
84
A
PRO
85
n
97
PRO
85
A
GLU
86
n
98
GLU
86
A
ASN
87
n
99
ASN
87
A
SER
88
n
100
SER
88
A
GLN
89
n
101
GLN
89
A
GLU
90
n
102
GLU
90
A
LEU
91
n
103
LEU
91
A
TYR
92
n
104
TYR
92
A
LEU
93
n
105
LEU
93
A
GLU
94
n
106
GLU
94
A
SER
95
n
107
SER
95
A
LEU
96
n
108
LEU
96
A
GLU
97
n
109
GLU
97
A
TYR
98
n
110
TYR
98
A
LEU
99
n
111
LEU
99
A
GLY
100
n
112
GLY
100
A
ILE
101
n
113
ILE
101
A
ASN
102
n
114
ASN
102
A
LEU
103
n
115
LEU
103
A
LYS
104
n
116
LYS
104
A
GLU
105
n
117
GLU
105
A
HIS
106
n
118
HIS
106
A
ASP
107
n
119
ASP
107
A
ILE
108
n
120
ILE
108
A
ARG
109
n
121
ARG
109
A
PHE
110
n
122
PHE
110
A
VAL
111
n
123
VAL
111
A
GLU
112
n
124
GLU
112
A
ASP
113
n
125
ASP
113
A
ASN
114
n
126
ASN
114
A
TRP
115
n
127
TRP
115
A
GLU
116
n
128
GLU
116
A
SER
117
n
129
SER
117
A
PRO
118
n
130
PRO
118
A
THR
119
n
131
THR
119
A
LEU
120
n
132
LEU
120
A
GLY
121
n
133
GLY
121
A
ALA
122
n
134
ALA
122
A
TRP
123
n
135
TRP
123
A
GLY
124
n
136
GLY
124
A
VAL
125
n
137
VAL
125
A
GLY
126
n
138
GLY
126
A
TRP
127
n
139
TRP
127
A
GLU
128
n
140
GLU
128
A
VAL
129
n
141
VAL
129
A
TRP
130
n
142
TRP
130
A
LEU
131
n
143
LEU
131
A
ASP
132
n
144
ASP
132
A
GLY
133
n
145
GLY
133
A
MSE
134
n
146
MSE
134
A
GLU
135
n
147
GLU
135
A
ILE
136
n
148
ILE
136
A
THR
137
n
149
THR
137
A
GLN
138
n
150
GLN
138
A
PHE
139
n
151
PHE
139
A
THR
140
n
152
THR
140
A
TYR
141
n
153
TYR
141
A
PHE
142
n
154
PHE
142
A
GLN
143
n
155
GLN
143
A
GLN
144
n
156
GLN
144
A
ILE
145
n
157
ILE
145
A
GLY
146
n
158
GLY
146
A
GLY
147
n
159
GLY
147
A
ILE
148
n
160
ILE
148
A
SER
149
n
161
SER
149
A
LEU
150
n
162
LEU
150
A
LYS
151
n
163
LYS
151
A
ASP
152
n
164
ASP
152
A
ILE
153
n
165
ILE
153
A
PRO
154
n
166
PRO
154
A
LEU
155
n
167
LEU
155
A
GLU
156
n
168
GLU
156
A
ILE
157
n
169
ILE
157
A
THR
158
n
170
THR
158
A
TYR
159
n
171
TYR
159
A
GLY
160
n
172
GLY
160
A
LEU
161
n
173
LEU
161
A
GLU
162
n
174
GLU
162
A
ARG
163
n
175
ARG
163
A
ILE
164
n
176
ILE
164
A
ALA
165
n
177
ALA
165
A
MSE
166
n
178
MSE
166
A
TYR
167
n
179
TYR
167
A
LEU
168
n
180
LEU
168
A
GLN
169
n
181
GLN
169
A
GLY
170
n
182
GLY
170
A
VAL
171
n
183
VAL
171
A
ASP
172
n
184
ASP
172
A
ASN
173
n
185
ASN
173
A
VAL
174
n
186
VAL
174
A
TYR
175
n
187
TYR
175
A
GLU
176
n
188
GLU
176
A
VAL
177
n
189
VAL
177
A
GLN
178
n
190
GLN
178
A
TRP
179
n
191
TRP
179
A
ASN
180
n
192
ASN
180
A
GLU
181
n
193
GLU
181
A
ASN
182
n
194
ASN
182
A
VAL
183
n
195
VAL
183
A
LYS
184
n
196
LYS
184
A
TYR
185
n
197
TYR
185
A
GLY
186
n
198
GLY
186
A
ASP
187
n
199
ASP
187
A
VAL
188
n
200
VAL
188
A
PHE
189
n
201
PHE
189
A
LEU
190
n
202
LEU
190
A
GLU
191
n
203
GLU
191
A
ASN
192
n
204
ASN
192
A
GLU
193
n
205
GLU
193
A
ARG
194
n
206
ARG
194
A
GLU
195
n
207
GLU
195
A
PHE
196
n
208
PHE
196
A
SER
197
n
209
SER
197
A
VAL
198
n
210
VAL
198
A
PHE
199
n
211
PHE
199
A
ASN
200
n
212
ASN
200
A
PHE
201
n
213
PHE
201
A
GLU
202
n
214
GLU
202
A
GLU
203
n
215
GLU
203
A
ALA
204
n
216
ALA
204
A
ASN
205
n
217
ASN
205
A
VAL
206
n
218
VAL
206
A
GLY
207
n
219
GLY
207
A
LEU
208
n
220
LEU
208
A
LEU
209
n
221
LEU
209
A
PHE
210
n
222
PHE
210
A
ARG
211
n
223
ARG
211
A
HIS
212
n
224
HIS
212
A
PHE
213
n
225
PHE
213
A
ASP
214
n
226
ASP
214
A
GLU
215
n
227
GLU
215
A
TYR
216
n
228
TYR
216
A
GLU
217
n
229
GLU
217
A
LYS
218
n
230
LYS
218
A
GLU
219
n
231
GLU
219
A
PHE
220
n
232
PHE
220
A
TYR
221
n
233
TYR
221
A
ARG
222
n
234
ARG
222
A
LEU
223
n
235
LEU
223
A
VAL
224
n
236
VAL
224
A
GLU
225
n
237
GLU
225
A
LYS
226
n
238
LYS
226
A
ASN
227
n
239
ASN
227
A
LEU
228
n
240
LEU
228
A
TYR
229
n
241
TYR
229
A
LEU
230
n
242
LEU
230
A
PRO
231
n
243
PRO
231
A
ALA
232
n
244
ALA
232
A
TYR
233
n
245
TYR
233
A
ASP
234
n
246
ASP
234
A
TYR
235
n
247
TYR
235
A
ILE
236
n
248
ILE
236
A
LEU
237
n
249
LEU
237
A
LYS
238
n
250
LYS
238
A
CYS
239
n
251
CYS
239
A
SER
240
n
252
SER
240
A
HIS
241
n
253
HIS
241
A
THR
242
n
254
THR
242
A
PHE
243
n
255
PHE
243
A
ASN
244
n
256
ASN
244
A
LEU
245
n
257
LEU
245
A
LEU
246
n
258
LEU
246
A
ASP
247
n
259
ASP
247
A
ALA
248
n
260
ALA
248
A
ARG
249
n
261
ARG
249
A
GLY
250
n
262
GLY
250
A
ALA
251
n
263
ALA
251
A
ILE
252
n
264
ILE
252
A
SER
253
n
265
SER
253
A
VAL
254
n
266
VAL
254
A
SER
255
n
267
SER
255
A
GLN
256
n
268
GLN
256
A
ARG
257
n
269
ARG
257
A
GLN
258
n
270
GLN
258
A
THR
259
n
271
THR
259
A
TYR
260
n
272
TYR
260
A
VAL
261
n
273
VAL
261
A
LYS
262
n
274
LYS
262
A
ARG
263
n
275
ARG
263
A
ILE
264
n
276
ILE
264
A
GLN
265
n
277
GLN
265
A
ALA
266
n
278
ALA
266
A
MSE
267
n
279
MSE
267
A
ALA
268
n
280
ALA
268
A
ARG
269
n
281
ARG
269
A
LYS
270
n
282
LYS
270
A
ALA
271
n
283
ALA
271
A
ALA
272
n
284
ALA
272
A
ARG
273
n
285
ARG
273
A
VAL
274
n
286
VAL
274
A
PHE
275
n
287
PHE
275
A
LEU
276
n
288
LEU
276
A
GLU
277
n
289
GLU
277
A
VAL
278
n
290
VAL
278
A
GLN
279
n
291
GLN
279
A
ALA
280
n
292
ALA
280
A
ASN
281
n
293
ASN
281
A
n
294
282
A
n
295
283
A
n
296
284
A
n
297
285
A
n
298
286
A
n
1
-11
B
n
2
-10
B
n
3
-9
B
n
4
-8
B
n
5
-7
B
n
6
-6
B
n
7
-5
B
n
8
-4
B
n
9
-3
B
n
10
-2
B
n
11
-1
B
n
12
0
B
MSE
1
n
13
MSE
1
B
TYR
2
n
14
TYR
2
B
LEU
3
n
15
LEU
3
B
GLN
4
n
16
GLN
4
B
ASP
5
n
17
ASP
5
B
VAL
6
n
18
VAL
6
B
ILE
7
n
19
ILE
7
B
MSE
8
n
20
MSE
8
B
LYS
9
n
21
LYS
9
B
LEU
10
n
22
LEU
10
B
ASN
11
n
23
ASN
11
B
ASP
12
n
24
ASP
12
B
PHE
13
n
25
PHE
13
B
TRP
14
n
26
TRP
14
B
ALA
15
n
27
ALA
15
B
SER
16
n
28
SER
16
B
LYS
17
n
29
LYS
17
B
GLY
18
n
30
GLY
18
B
CYS
19
n
31
CYS
19
B
LEU
20
n
32
LEU
20
B
LEU
21
n
33
LEU
21
B
GLU
22
n
34
GLU
22
B
GLN
23
n
35
GLN
23
B
PRO
24
n
36
PRO
24
B
TYR
25
n
37
TYR
25
B
ASP
26
n
38
ASP
26
B
MSE
27
n
39
MSE
27
B
GLU
28
n
40
GLU
28
B
VAL
29
n
41
VAL
29
B
GLY
30
n
42
GLY
30
B
ALA
31
n
43
ALA
31
B
GLY
32
n
44
GLY
32
B
THR
33
n
45
THR
33
B
PHE
34
n
46
PHE
34
B
HIS
35
n
47
HIS
35
B
PRO
36
n
48
PRO
36
B
ALA
37
n
49
ALA
37
B
THR
38
n
50
THR
38
B
PHE
39
n
51
PHE
39
B
PHE
40
n
52
PHE
40
B
GLY
41
n
53
GLY
41
B
SER
42
n
54
SER
42
B
LEU
43
n
55
LEU
43
B
ARG
44
n
56
ARG
44
B
LYS
45
n
57
LYS
45
B
GLY
46
n
58
GLY
46
B
PRO
47
n
59
PRO
47
B
TRP
48
n
60
TRP
48
B
LYS
49
n
61
LYS
49
B
VAL
50
n
62
VAL
50
B
ALA
51
n
63
ALA
51
B
TYR
52
n
64
TYR
52
B
VAL
53
n
65
VAL
53
B
GLN
54
n
66
GLN
54
B
PRO
55
n
67
PRO
55
B
SER
56
n
68
SER
56
B
ARG
57
n
69
ARG
57
B
ARG
58
n
70
ARG
58
B
PRO
59
n
71
PRO
59
B
THR
60
n
72
THR
60
B
ASP
61
n
73
ASP
61
B
GLY
62
n
74
GLY
62
B
ARG
63
n
75
ARG
63
B
TYR
64
n
76
TYR
64
B
GLY
65
n
77
GLY
65
B
GLU
66
n
78
GLU
66
B
ASN
67
n
79
ASN
67
B
PRO
68
n
80
PRO
68
B
ASN
69
n
81
ASN
69
B
ARG
70
n
82
ARG
70
B
LEU
71
n
83
LEU
71
B
GLN
72
n
84
GLN
72
B
ARG
73
n
85
ARG
73
B
TYR
74
n
86
TYR
74
B
PHE
75
n
87
PHE
75
B
GLN
76
n
88
GLN
76
B
TYR
77
n
89
TYR
77
B
GLN
78
n
90
GLN
78
B
VAL
79
n
91
VAL
79
B
ILE
80
n
92
ILE
80
B
ILE
81
n
93
ILE
81
B
LYS
82
n
94
LYS
82
B
PRO
83
n
95
PRO
83
B
SER
84
n
96
SER
84
B
PRO
85
n
97
PRO
85
B
GLU
86
n
98
GLU
86
B
ASN
87
n
99
ASN
87
B
SER
88
n
100
SER
88
B
GLN
89
n
101
GLN
89
B
GLU
90
n
102
GLU
90
B
LEU
91
n
103
LEU
91
B
TYR
92
n
104
TYR
92
B
LEU
93
n
105
LEU
93
B
GLU
94
n
106
GLU
94
B
SER
95
n
107
SER
95
B
LEU
96
n
108
LEU
96
B
GLU
97
n
109
GLU
97
B
TYR
98
n
110
TYR
98
B
LEU
99
n
111
LEU
99
B
GLY
100
n
112
GLY
100
B
ILE
101
n
113
ILE
101
B
n
114
102
B
n
115
103
B
LYS
104
n
116
LYS
104
B
GLU
105
n
117
GLU
105
B
HIS
106
n
118
HIS
106
B
ASP
107
n
119
ASP
107
B
ILE
108
n
120
ILE
108
B
ARG
109
n
121
ARG
109
B
PHE
110
n
122
PHE
110
B
VAL
111
n
123
VAL
111
B
GLU
112
n
124
GLU
112
B
ASP
113
n
125
ASP
113
B
ASN
114
n
126
ASN
114
B
TRP
115
n
127
TRP
115
B
GLU
116
n
128
GLU
116
B
SER
117
n
129
SER
117
B
PRO
118
n
130
PRO
118
B
THR
119
n
131
THR
119
B
LEU
120
n
132
LEU
120
B
GLY
121
n
133
GLY
121
B
ALA
122
n
134
ALA
122
B
TRP
123
n
135
TRP
123
B
GLY
124
n
136
GLY
124
B
VAL
125
n
137
VAL
125
B
GLY
126
n
138
GLY
126
B
TRP
127
n
139
TRP
127
B
GLU
128
n
140
GLU
128
B
VAL
129
n
141
VAL
129
B
TRP
130
n
142
TRP
130
B
LEU
131
n
143
LEU
131
B
ASP
132
n
144
ASP
132
B
GLY
133
n
145
GLY
133
B
MSE
134
n
146
MSE
134
B
GLU
135
n
147
GLU
135
B
ILE
136
n
148
ILE
136
B
THR
137
n
149
THR
137
B
GLN
138
n
150
GLN
138
B
PHE
139
n
151
PHE
139
B
THR
140
n
152
THR
140
B
TYR
141
n
153
TYR
141
B
PHE
142
n
154
PHE
142
B
GLN
143
n
155
GLN
143
B
GLN
144
n
156
GLN
144
B
ILE
145
n
157
ILE
145
B
GLY
146
n
158
GLY
146
B
GLY
147
n
159
GLY
147
B
ILE
148
n
160
ILE
148
B
SER
149
n
161
SER
149
B
LEU
150
n
162
LEU
150
B
LYS
151
n
163
LYS
151
B
ASP
152
n
164
ASP
152
B
ILE
153
n
165
ILE
153
B
PRO
154
n
166
PRO
154
B
LEU
155
n
167
LEU
155
B
GLU
156
n
168
GLU
156
B
ILE
157
n
169
ILE
157
B
THR
158
n
170
THR
158
B
TYR
159
n
171
TYR
159
B
GLY
160
n
172
GLY
160
B
LEU
161
n
173
LEU
161
B
GLU
162
n
174
GLU
162
B
ARG
163
n
175
ARG
163
B
ILE
164
n
176
ILE
164
B
ALA
165
n
177
ALA
165
B
MSE
166
n
178
MSE
166
B
TYR
167
n
179
TYR
167
B
LEU
168
n
180
LEU
168
B
GLN
169
n
181
GLN
169
B
GLY
170
n
182
GLY
170
B
VAL
171
n
183
VAL
171
B
ASP
172
n
184
ASP
172
B
ASN
173
n
185
ASN
173
B
VAL
174
n
186
VAL
174
B
TYR
175
n
187
TYR
175
B
GLU
176
n
188
GLU
176
B
VAL
177
n
189
VAL
177
B
GLN
178
n
190
GLN
178
B
TRP
179
n
191
TRP
179
B
ASN
180
n
192
ASN
180
B
GLU
181
n
193
GLU
181
B
ASN
182
n
194
ASN
182
B
VAL
183
n
195
VAL
183
B
LYS
184
n
196
LYS
184
B
TYR
185
n
197
TYR
185
B
GLY
186
n
198
GLY
186
B
ASP
187
n
199
ASP
187
B
VAL
188
n
200
VAL
188
B
PHE
189
n
201
PHE
189
B
LEU
190
n
202
LEU
190
B
GLU
191
n
203
GLU
191
B
ASN
192
n
204
ASN
192
B
GLU
193
n
205
GLU
193
B
ARG
194
n
206
ARG
194
B
GLU
195
n
207
GLU
195
B
PHE
196
n
208
PHE
196
B
SER
197
n
209
SER
197
B
VAL
198
n
210
VAL
198
B
PHE
199
n
211
PHE
199
B
ASN
200
n
212
ASN
200
B
PHE
201
n
213
PHE
201
B
GLU
202
n
214
GLU
202
B
GLU
203
n
215
GLU
203
B
ALA
204
n
216
ALA
204
B
ASN
205
n
217
ASN
205
B
VAL
206
n
218
VAL
206
B
GLY
207
n
219
GLY
207
B
LEU
208
n
220
LEU
208
B
LEU
209
n
221
LEU
209
B
PHE
210
n
222
PHE
210
B
ARG
211
n
223
ARG
211
B
HIS
212
n
224
HIS
212
B
PHE
213
n
225
PHE
213
B
ASP
214
n
226
ASP
214
B
GLU
215
n
227
GLU
215
B
TYR
216
n
228
TYR
216
B
GLU
217
n
229
GLU
217
B
LYS
218
n
230
LYS
218
B
GLU
219
n
231
GLU
219
B
PHE
220
n
232
PHE
220
B
TYR
221
n
233
TYR
221
B
ARG
222
n
234
ARG
222
B
LEU
223
n
235
LEU
223
B
VAL
224
n
236
VAL
224
B
GLU
225
n
237
GLU
225
B
LYS
226
n
238
LYS
226
B
ASN
227
n
239
ASN
227
B
LEU
228
n
240
LEU
228
B
TYR
229
n
241
TYR
229
B
LEU
230
n
242
LEU
230
B
PRO
231
n
243
PRO
231
B
ALA
232
n
244
ALA
232
B
TYR
233
n
245
TYR
233
B
ASP
234
n
246
ASP
234
B
TYR
235
n
247
TYR
235
B
ILE
236
n
248
ILE
236
B
LEU
237
n
249
LEU
237
B
LYS
238
n
250
LYS
238
B
CYS
239
n
251
CYS
239
B
SER
240
n
252
SER
240
B
HIS
241
n
253
HIS
241
B
THR
242
n
254
THR
242
B
PHE
243
n
255
PHE
243
B
ASN
244
n
256
ASN
244
B
LEU
245
n
257
LEU
245
B
LEU
246
n
258
LEU
246
B
ASP
247
n
259
ASP
247
B
ALA
248
n
260
ALA
248
B
ARG
249
n
261
ARG
249
B
GLY
250
n
262
GLY
250
B
ALA
251
n
263
ALA
251
B
ILE
252
n
264
ILE
252
B
SER
253
n
265
SER
253
B
VAL
254
n
266
VAL
254
B
SER
255
n
267
SER
255
B
GLN
256
n
268
GLN
256
B
ARG
257
n
269
ARG
257
B
GLN
258
n
270
GLN
258
B
THR
259
n
271
THR
259
B
TYR
260
n
272
TYR
260
B
VAL
261
n
273
VAL
261
B
LYS
262
n
274
LYS
262
B
ARG
263
n
275
ARG
263
B
ILE
264
n
276
ILE
264
B
GLN
265
n
277
GLN
265
B
ALA
266
n
278
ALA
266
B
MSE
267
n
279
MSE
267
B
ALA
268
n
280
ALA
268
B
ARG
269
n
281
ARG
269
B
LYS
270
n
282
LYS
270
B
ALA
271
n
283
ALA
271
B
ALA
272
n
284
ALA
272
B
ARG
273
n
285
ARG
273
B
VAL
274
n
286
VAL
274
B
PHE
275
n
287
PHE
275
B
LEU
276
n
288
LEU
276
B
GLU
277
n
289
GLU
277
B
VAL
278
n
290
VAL
278
B
GLN
279
n
291
GLN
279
B
ALA
280
n
292
ALA
280
B
n
293
281
B
n
294
282
B
n
295
283
B
n
296
284
B
n
297
285
B
n
298
286
B
author_and_software_defined_assembly
PISA
2
dimeric
4780
-18
21130
A
MSE
1
SELENOMETHIONINE
A
MSE
13
MET
A
MSE
8
SELENOMETHIONINE
A
MSE
20
MET
A
MSE
27
SELENOMETHIONINE
A
MSE
39
MET
A
MSE
134
SELENOMETHIONINE
A
MSE
146
MET
A
MSE
166
SELENOMETHIONINE
A
MSE
178
MET
A
MSE
267
SELENOMETHIONINE
A
MSE
279
MET
B
MSE
1
SELENOMETHIONINE
B
MSE
13
MET
B
MSE
8
SELENOMETHIONINE
B
MSE
20
MET
B
MSE
27
SELENOMETHIONINE
B
MSE
39
MET
B
MSE
134
SELENOMETHIONINE
B
MSE
146
MET
B
MSE
166
SELENOMETHIONINE
B
MSE
178
MET
B
MSE
267
SELENOMETHIONINE
B
MSE
279
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LEU
20
A
N
LEU
32
A
O
LYS
49
A
O
LYS
61
A
N
SER
56
A
N
SER
68
A
O
TYR
74
A
O
TYR
86
A
N
TYR
77
A
N
TYR
89
A
O
TYR
159
A
O
TYR
171
A
O
GLU
156
A
O
GLU
168
A
N
THR
140
A
N
THR
152
A
O
TYR
141
A
O
TYR
153
A
N
VAL
125
A
N
VAL
137
A
O
TRP
130
A
O
TRP
142
A
N
ARG
109
A
N
ARG
121
A
N
LEU
20
A
N
LEU
32
A
O
LYS
49
A
O
LYS
61
A
N
SER
56
A
N
SER
68
A
O
TYR
74
A
O
TYR
86
A
N
TYR
77
A
N
TYR
89
A
O
TYR
159
A
O
TYR
171
A
O
GLU
156
A
O
GLU
168
A
N
THR
140
A
N
THR
152
A
O
TYR
141
A
O
TYR
153
A
N
VAL
125
A
N
VAL
137
A
O
ALA
122
A
O
ALA
134
A
N
SER
117
A
N
SER
129
A
N
ASN
180
A
N
ASN
192
A
O
VAL
183
A
O
VAL
195
B
N
LEU
20
B
N
LEU
32
B
O
ALA
51
B
O
ALA
63
B
N
SER
56
B
N
SER
68
B
O
TYR
74
B
O
TYR
86
B
N
VAL
79
B
N
VAL
91
B
O
ILE
157
B
O
ILE
169
B
O
GLU
156
B
O
GLU
168
B
N
THR
140
B
N
THR
152
B
O
PHE
139
B
O
PHE
151
B
N
TRP
127
B
N
TRP
139
B
O
GLU
128
B
O
GLU
140
B
N
VAL
111
B
N
VAL
123
B
N
LEU
20
B
N
LEU
32
B
O
ALA
51
B
O
ALA
63
B
N
SER
56
B
N
SER
68
B
O
TYR
74
B
O
TYR
86
B
N
VAL
79
B
N
VAL
91
B
O
ILE
157
B
O
ILE
169
B
O
GLU
156
B
O
GLU
168
B
N
THR
140
B
N
THR
152
B
O
PHE
139
B
O
PHE
151
B
N
TRP
127
B
N
TRP
139
B
O
ALA
122
B
O
ALA
134
B
N
SER
117
B
N
SER
129
1
A
CG
LYS
45
A
CG
LYS
57
1
Y
1
A
CD
LYS
45
A
CD
LYS
57
1
Y
1
A
CE
LYS
45
A
CE
LYS
57
1
Y
1
A
NZ
LYS
45
A
NZ
LYS
57
1
Y
1
A
CG
ARG
70
A
CG
ARG
82
1
Y
1
A
CD
ARG
70
A
CD
ARG
82
1
Y
1
A
NE
ARG
70
A
NE
ARG
82
1
Y
1
A
CZ
ARG
70
A
CZ
ARG
82
1
Y
1
A
NH1
ARG
70
A
NH1
ARG
82
1
Y
1
A
NH2
ARG
70
A
NH2
ARG
82
1
Y
1
A
CG
ASN
102
A
CG
ASN
114
1
Y
1
A
OD1
ASN
102
A
OD1
ASN
114
1
Y
1
A
ND2
ASN
102
A
ND2
ASN
114
1
Y
1
A
CG
LEU
103
A
CG
LEU
115
1
Y
1
A
CD1
LEU
103
A
CD1
LEU
115
1
Y
1
A
CD2
LEU
103
A
CD2
LEU
115
1
Y
1
A
CG
LYS
104
A
CG
LYS
116
1
Y
1
A
CD
LYS
104
A
CD
LYS
116
1
Y
1
A
CE
LYS
104
A
CE
LYS
116
1
Y
1
A
NZ
LYS
104
A
NZ
LYS
116
1
Y
1
A
CG
GLU
105
A
CG
GLU
117
1
Y
1
A
CD
GLU
105
A
CD
GLU
117
1
Y
1
A
OE1
GLU
105
A
OE1
GLU
117
1
Y
1
A
OE2
GLU
105
A
OE2
GLU
117
1
Y
1
A
CB
GLU
116
A
CB
GLU
128
1
Y
1
A
CG
GLU
116
A
CG
GLU
128
1
Y
1
A
CD
GLU
116
A
CD
GLU
128
1
Y
1
A
OE1
GLU
116
A
OE1
GLU
128
1
Y
1
A
OE2
GLU
116
A
OE2
GLU
128
1
Y
1
A
CG
LYS
151
A
CG
LYS
163
1
Y
1
A
CD
LYS
151
A
CD
LYS
163
1
Y
1
A
CE
LYS
151
A
CE
LYS
163
1
Y
1
A
NZ
LYS
151
A
NZ
LYS
163
1
Y
1
B
CG
LYS
104
B
CG
LYS
116
1
Y
1
B
CD
LYS
104
B
CD
LYS
116
1
Y
1
B
CE
LYS
104
B
CE
LYS
116
1
Y
1
B
NZ
LYS
104
B
NZ
LYS
116
1
Y
1
B
CG
GLU
105
B
CG
GLU
117
1
Y
1
B
CD
GLU
105
B
CD
GLU
117
1
Y
1
B
OE1
GLU
105
B
OE1
GLU
117
1
Y
1
B
OE2
GLU
105
B
OE2
GLU
117
1
Y
1
A
MSE
-11
A
MSE
1
1
Y
1
A
GLY
-10
A
GLY
2
1
Y
1
A
SER
-9
A
SER
3
1
Y
1
A
ASP
-8
A
ASP
4
1
Y
1
A
LYS
-7
A
LYS
5
1
Y
1
A
ILE
-6
A
ILE
6
1
Y
1
A
HIS
-5
A
HIS
7
1
Y
1
A
HIS
-4
A
HIS
8
1
Y
1
A
HIS
-3
A
HIS
9
1
Y
1
A
HIS
-2
A
HIS
10
1
Y
1
A
HIS
-1
A
HIS
11
1
Y
1
A
HIS
0
A
HIS
12
1
Y
1
A
ASP
61
A
ASP
73
1
Y
1
A
GLY
62
A
GLY
74
1
Y
1
A
ARG
63
A
ARG
75
1
Y
1
A
TYR
64
A
TYR
76
1
Y
1
A
GLY
65
A
GLY
77
1
Y
1
A
GLU
282
A
GLU
294
1
Y
1
A
ASN
283
A
ASN
295
1
Y
1
A
SER
284
A
SER
296
1
Y
1
A
PRO
285
A
PRO
297
1
Y
1
A
ALA
286
A
ALA
298
1
Y
1
B
MSE
-11
B
MSE
1
1
Y
1
B
GLY
-10
B
GLY
2
1
Y
1
B
SER
-9
B
SER
3
1
Y
1
B
ASP
-8
B
ASP
4
1
Y
1
B
LYS
-7
B
LYS
5
1
Y
1
B
ILE
-6
B
ILE
6
1
Y
1
B
HIS
-5
B
HIS
7
1
Y
1
B
HIS
-4
B
HIS
8
1
Y
1
B
HIS
-3
B
HIS
9
1
Y
1
B
HIS
-2
B
HIS
10
1
Y
1
B
HIS
-1
B
HIS
11
1
Y
1
B
HIS
0
B
HIS
12
1
Y
1
B
ASN
102
B
ASN
114
1
Y
1
B
LEU
103
B
LEU
115
1
Y
1
B
ASN
281
B
ASN
293
1
Y
1
B
GLU
282
B
GLU
294
1
Y
1
B
ASN
283
B
ASN
295
1
Y
1
B
SER
284
B
SER
296
1
Y
1
B
PRO
285
B
PRO
297
1
Y
1
B
ALA
286
B
ALA
298
1
Y
1
A
A
NH1
O
ARG
HOH
109
369
2.06
1
A
A
NH2
O
ARG
HOH
269
323
2.14
1
A
A
OD1
O
ASN
HOH
227
362
2.19
1
9.36
1.50
119.30
128.66
A
A
A
C
N
CA
SER
PRO
PRO
117
118
118
Y
1
-18.06
2.50
113.10
95.04
B
B
B
N
CA
C
GLY
GLY
GLY
133
133
133
N
1
16.45
2.30
115.30
131.75
B
B
B
CA
CB
CG
LEU
LEU
LEU
150
150
150
N
1
A
ASP
26
-91.36
50.99
1
B
ASP
26
-92.56
53.17
1
B
ARG
63
-141.38
28.48
1
B
ASP
107
96.03
90.43
1
B
ASP
132
70.29
39.62
1
B
MSE
134
71.57
112.80
33.7
-10.312
0.000
0.000
7.782
0.000
2.530
0.254
0.197
0.197
1.95
20.00
4045
44557
40051
8.8
97.5
RANDOM
1
THROUGHOUT
3.000
MAD
STANDARD CNS DICTIONARY/ENGH AND HUBER
BULK SOLVENT CORRECTION
38.66
0.35
1.95
20.00
255
4829
0
0
4574
1.777
0.02
1.563
1.500
2.386
2.000
2.498
2.000
3.520
2.500
0.3168
0.2794
1.96
57
505
50
10.01
93.4
29.71
1.800
29.700
1J5W
55037
0.06
1
15.3
6.500
98.2
1.80
1.85
2.2
0.611
2.20
93.6
data reduction
MOSFLM
data scaling
SCALA
data reduction
CCP4
phasing
SOLVE
model building
RESOLVE
refinement
CNS
1.0
data scaling
CCP4
(SCALA)
phasing
RESOLVE
Crystal structure of Glycyl-tRNA synthetase alpha chain (TM0216) from Thermotoga maritima at 1.95 A resolution
1
N
N
1
N
N
2
N
N
2
N
N
A
TYR
2
A
TYR
14
HELX_P
A
LYS
17
A
LYS
29
1
1
16
A
ALA
31
A
ALA
43
HELX_P
A
PHE
34
A
PHE
46
5
2
4
A
HIS
35
A
HIS
47
HELX_P
A
PHE
40
A
PHE
52
1
3
6
A
GLY
41
A
GLY
53
HELX_P
A
ARG
44
A
ARG
56
5
4
4
A
ASN
87
A
ASN
99
HELX_P
A
LEU
99
A
LEU
111
1
5
13
A
PRO
118
A
PRO
130
HELX_P
A
GLY
121
A
GLY
133
5
6
4
A
LEU
161
A
LEU
173
HELX_P
A
GLY
170
A
GLY
182
1
7
10
A
ASN
173
A
ASN
185
HELX_P
A
GLU
176
A
GLU
188
5
8
4
A
TYR
185
A
TYR
197
HELX_P
A
GLU
202
A
GLU
214
1
9
18
A
ASN
205
A
ASN
217
HELX_P
A
LYS
226
A
LYS
238
1
10
22
A
LEU
228
A
LEU
240
HELX_P
A
ARG
249
A
ARG
261
1
11
22
A
SER
253
A
SER
265
HELX_P
A
ALA
280
A
ALA
292
1
12
28
B
TYR
2
B
TYR
14
HELX_P
B
SER
16
B
SER
28
1
13
15
B
ALA
31
B
ALA
43
HELX_P
B
PHE
34
B
PHE
46
5
14
4
B
HIS
35
B
HIS
47
HELX_P
B
PHE
40
B
PHE
52
1
15
6
B
GLY
41
B
GLY
53
HELX_P
B
ARG
44
B
ARG
56
5
16
4
B
PRO
59
B
PRO
71
HELX_P
B
GLY
62
B
GLY
74
5
17
4
B
ASN
87
B
ASN
99
HELX_P
B
GLY
100
B
GLY
112
1
18
14
B
PRO
118
B
PRO
130
HELX_P
B
GLY
121
B
GLY
133
5
19
4
B
LEU
161
B
LEU
173
HELX_P
B
GLY
170
B
GLY
182
1
20
10
B
ASN
173
B
ASN
185
HELX_P
B
VAL
177
B
VAL
189
5
21
5
B
LYS
184
B
LYS
196
HELX_P
B
GLU
203
B
GLU
215
1
22
20
B
ASN
205
B
ASN
217
HELX_P
B
GLU
225
B
GLU
237
1
23
21
B
LEU
228
B
LEU
240
HELX_P
B
ARG
249
B
ARG
261
1
24
22
B
SER
253
B
SER
265
HELX_P
B
ALA
280
B
ALA
292
1
25
28
covale
1.337
both
A
MSE
1
A
C
MSE
13
1_555
A
TYR
2
A
N
TYR
14
1_555
covale
1.332
both
A
ILE
7
A
C
ILE
19
1_555
A
MSE
8
A
N
MSE
20
1_555
covale
1.329
both
A
MSE
8
A
C
MSE
20
1_555
A
LYS
9
A
N
LYS
21
1_555
covale
1.325
both
A
ASP
26
A
C
ASP
38
1_555
A
MSE
27
A
N
MSE
39
1_555
covale
1.345
both
A
MSE
27
A
C
MSE
39
1_555
A
GLU
28
A
N
GLU
40
1_555
covale
1.327
both
A
GLY
133
A
C
GLY
145
1_555
A
MSE
134
A
N
MSE
146
1_555
covale
1.327
both
A
MSE
134
A
C
MSE
146
1_555
A
GLU
135
A
N
GLU
147
1_555
covale
1.334
both
A
ALA
165
A
C
ALA
177
1_555
A
MSE
166
A
N
MSE
178
1_555
covale
1.322
both
A
MSE
166
A
C
MSE
178
1_555
A
TYR
167
A
N
TYR
179
1_555
covale
1.334
both
A
ALA
266
A
C
ALA
278
1_555
A
MSE
267
A
N
MSE
279
1_555
covale
1.317
both
A
MSE
267
A
C
MSE
279
1_555
A
ALA
268
A
N
ALA
280
1_555
covale
1.340
both
B
MSE
1
B
C
MSE
13
1_555
B
TYR
2
B
N
TYR
14
1_555
covale
1.334
both
B
ILE
7
B
C
ILE
19
1_555
B
MSE
8
B
N
MSE
20
1_555
covale
1.323
both
B
MSE
8
B
C
MSE
20
1_555
B
LYS
9
B
N
LYS
21
1_555
covale
1.330
both
B
ASP
26
B
C
ASP
38
1_555
B
MSE
27
B
N
MSE
39
1_555
covale
1.328
both
B
MSE
27
B
C
MSE
39
1_555
B
GLU
28
B
N
GLU
40
1_555
covale
1.331
both
B
GLY
133
B
C
GLY
145
1_555
B
MSE
134
B
N
MSE
146
1_555
covale
1.321
both
B
MSE
134
B
C
MSE
146
1_555
B
GLU
135
B
N
GLU
147
1_555
covale
1.332
both
B
ALA
165
B
C
ALA
177
1_555
B
MSE
166
B
N
MSE
178
1_555
covale
1.323
both
B
MSE
166
B
C
MSE
178
1_555
B
TYR
167
B
N
TYR
179
1_555
covale
1.331
both
B
ALA
266
B
C
ALA
278
1_555
B
MSE
267
B
N
MSE
279
1_555
covale
1.357
both
B
MSE
267
B
C
MSE
279
1_555
B
ALA
268
B
N
ALA
280
1_555
LIGASE
structural genomics, TM0216, JCSG, Glycyl-tRNA synthetase alpha chain, PSI, Protein Structure Initiative, Joint Center for Structural Genomics, LIGASE
A
LYS
82
A
LYS
94
1
A
PRO
83
A
PRO
95
-0.36
B
LYS
82
B
LYS
94
1
B
PRO
83
B
PRO
95
-0.21
SYGA_THEMA
UNP
1
1
Q9WY59
MYLQDVIMKLNDFWASKGCLLEQPYDMEVGAGTFHPATFFGSLRKGPWKVAYVQPSRRPTDGRYGENPNRLQRYFQYQVI
IKPSPENSQELYLESLEYLGINLKEHDIRFVEDNWESPTLGAWGVGWEVWLDGMEITQFTYFQQIGGISLKDIPLEITYG
LERIAMYLQGVDNVYEVQWNENVKYGDVFLENEREFSVFNFEEANVGLLFRHFDEYEKEFYRLVEKNLYLPAYDYILKCS
HTFNLLDARGAISVSQRQTYVKRIQAMARKAARVFLEVQANENSPA
1
286
1J5W
1
286
Q9WY59
A
1
13
298
1
286
1J5W
1
286
Q9WY59
B
1
13
298
1
expression tag
MSE
-11
1J5W
A
Q9WY59
UNP
1
1
expression tag
GLY
-10
1J5W
A
Q9WY59
UNP
2
1
expression tag
SER
-9
1J5W
A
Q9WY59
UNP
3
1
expression tag
ASP
-8
1J5W
A
Q9WY59
UNP
4
1
expression tag
LYS
-7
1J5W
A
Q9WY59
UNP
5
1
expression tag
ILE
-6
1J5W
A
Q9WY59
UNP
6
1
expression tag
HIS
-5
1J5W
A
Q9WY59
UNP
7
1
expression tag
HIS
-4
1J5W
A
Q9WY59
UNP
8
1
expression tag
HIS
-3
1J5W
A
Q9WY59
UNP
9
1
expression tag
HIS
-2
1J5W
A
Q9WY59
UNP
10
1
expression tag
HIS
-1
1J5W
A
Q9WY59
UNP
11
1
expression tag
HIS
0
1J5W
A
Q9WY59
UNP
12
1
MET
modified residue
MSE
1
1J5W
A
Q9WY59
UNP
1
13
1
MET
modified residue
MSE
8
1J5W
A
Q9WY59
UNP
8
20
1
MET
modified residue
MSE
27
1J5W
A
Q9WY59
UNP
27
39
1
MET
modified residue
MSE
134
1J5W
A
Q9WY59
UNP
134
146
1
MET
modified residue
MSE
166
1J5W
A
Q9WY59
UNP
166
178
1
MET
modified residue
MSE
267
1J5W
A
Q9WY59
UNP
267
279
2
expression tag
MSE
-11
1J5W
B
Q9WY59
UNP
1
2
expression tag
GLY
-10
1J5W
B
Q9WY59
UNP
2
2
expression tag
SER
-9
1J5W
B
Q9WY59
UNP
3
2
expression tag
ASP
-8
1J5W
B
Q9WY59
UNP
4
2
expression tag
LYS
-7
1J5W
B
Q9WY59
UNP
5
2
expression tag
ILE
-6
1J5W
B
Q9WY59
UNP
6
2
expression tag
HIS
-5
1J5W
B
Q9WY59
UNP
7
2
expression tag
HIS
-4
1J5W
B
Q9WY59
UNP
8
2
expression tag
HIS
-3
1J5W
B
Q9WY59
UNP
9
2
expression tag
HIS
-2
1J5W
B
Q9WY59
UNP
10
2
expression tag
HIS
-1
1J5W
B
Q9WY59
UNP
11
2
expression tag
HIS
0
1J5W
B
Q9WY59
UNP
12
2
MET
modified residue
MSE
1
1J5W
B
Q9WY59
UNP
1
13
2
MET
modified residue
MSE
8
1J5W
B
Q9WY59
UNP
8
20
2
MET
modified residue
MSE
27
1J5W
B
Q9WY59
UNP
27
39
2
MET
modified residue
MSE
134
1J5W
B
Q9WY59
UNP
134
146
2
MET
modified residue
MSE
166
1J5W
B
Q9WY59
UNP
166
178
2
MET
modified residue
MSE
267
1J5W
B
Q9WY59
UNP
267
279
7
7
2
7
7
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
LEU
20
A
LEU
32
A
LEU
21
A
LEU
33
A
TRP
48
A
TRP
60
A
ARG
57
A
ARG
69
A
ARG
73
A
ARG
85
A
LYS
82
A
LYS
94
A
LEU
155
A
LEU
167
A
GLY
160
A
GLY
172
A
MSE
134
A
MSE
146
A
GLN
144
A
GLN
156
A
ALA
122
A
ALA
134
A
LEU
131
A
LEU
143
A
ILE
108
A
ILE
120
A
ASP
113
A
ASP
125
A
LEU
20
A
LEU
32
A
LEU
21
A
LEU
33
A
TRP
48
A
TRP
60
A
ARG
57
A
ARG
69
A
ARG
73
A
ARG
85
A
LYS
82
A
LYS
94
A
LEU
155
A
LEU
167
A
GLY
160
A
GLY
172
A
MSE
134
A
MSE
146
A
GLN
144
A
GLN
156
A
ALA
122
A
ALA
134
A
LEU
131
A
LEU
143
A
GLU
116
A
GLU
128
A
SER
117
A
SER
129
A
GLN
178
A
GLN
190
A
ASN
180
A
ASN
192
A
VAL
183
A
VAL
195
A
LYS
184
A
LYS
196
B
LEU
20
B
LEU
32
B
LEU
21
B
LEU
33
B
TRP
48
B
TRP
60
B
ARG
57
B
ARG
69
B
ARG
73
B
ARG
85
B
LYS
82
B
LYS
94
B
LEU
155
B
LEU
167
B
GLY
160
B
GLY
172
B
GLU
135
B
GLU
147
B
GLN
144
B
GLN
156
B
ALA
122
B
ALA
134
B
LEU
131
B
LEU
143
B
ILE
108
B
ILE
120
B
GLU
112
B
GLU
124
B
LEU
20
B
LEU
32
B
LEU
21
B
LEU
33
B
TRP
48
B
TRP
60
B
ARG
57
B
ARG
69
B
ARG
73
B
ARG
85
B
LYS
82
B
LYS
94
B
LEU
155
B
LEU
167
B
GLY
160
B
GLY
172
B
GLU
135
B
GLU
147
B
GLN
144
B
GLN
156
B
ALA
122
B
ALA
134
B
LEU
131
B
LEU
143
B
TRP
115
B
TRP
127
B
SER
117
B
SER
129
19
P 21 21 21