.022422 .012945 .000000 .000000 .025890 .000000 .000000 .000000 .010190 .00000 .00000 .00000 Ratnaparkhi, G.S. Varadarajan, R. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 44.600 44.600 98.140 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking H2 N 16.023 AMINO GROUP non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US J.Biol.Chem. JBCHA3 0071 0021-9258 276 28789 28798 10.1074/jbc.M101906200 11373282 Osmolytes stabilize ribonuclease S by stabilizing its fragments S protein and S peptide to compact folding-competent states. 2001 1.000000 .000000 .000000 .000000 1.000000 .000000 .000000 .000000 1.000000 .00000 .00000 .00000 293.0 1 IMAGE PLATE 1998-08-26 MARRESEARCH mirrors SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RU200 1750.952 RIBONUCLEASE PANCREATIC 3.1.27.5 S PEPTIDE 1 syn polymer 11555.981 RIBONUCLEASE PANCREATIC 3.1.27.5 S PROTEIN 1 nat polymer 96.063 SULFATE ION 1 syn non-polymer 18.015 water 41 nat water RNASE S RNASE S no yes KETAAAKFERQHMDS(NH2) KETAAAKFERQHMDSX A polypeptide(L) no no SSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTT QANKHIIVACEGNPYVPVHFDASV SSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTT QANKHIIVACEGNPYVPVHFDASV B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n cattle Bos sample 9913 pancreas Bos taurus 2.12 41.89 VAPOR DIFFUSION, HANGING DROP 4.75 Ammonium Sulfate, cesium Chloride, pH 4.75, VAPOR DIFFUSION, HANGING DROP, temperature 293.0K 293.0 software repository Initial release Version format compliance Version format compliance Refinement description 1 0 2001-06-06 1 1 2008-04-27 1 2 2011-07-13 1 3 2017-10-04 1J7Z is RIBONUCLEASE PANCREATIC RCSB Y RCSB 2001-05-19 REL REL SO4 SULFATE ION HOH water This peptide was chemically synthesized. It is naturally found in Bos Taurus sample SO4 125 3 SO4 SO4 125 B WAT 202 4 HOH HOH 202 A WAT 222 4 HOH HOH 222 A WAT 223 4 HOH HOH 223 A WAT 227 4 HOH HOH 227 A WAT 229 4 HOH HOH 229 A WAT 247 4 HOH HOH 247 A WAT 249 4 HOH HOH 249 A WAT 201 4 HOH HOH 201 B WAT 203 4 HOH HOH 203 B WAT 204 4 HOH HOH 204 B WAT 205 4 HOH HOH 205 B WAT 206 4 HOH HOH 206 B WAT 207 4 HOH HOH 207 B WAT 208 4 HOH HOH 208 B WAT 209 4 HOH HOH 209 B WAT 210 4 HOH HOH 210 B WAT 211 4 HOH HOH 211 B WAT 212 4 HOH HOH 212 B WAT 213 4 HOH HOH 213 B WAT 214 4 HOH HOH 214 B WAT 215 4 HOH HOH 215 B WAT 216 4 HOH HOH 216 B WAT 217 4 HOH HOH 217 B WAT 221 4 HOH HOH 221 B WAT 224 4 HOH HOH 224 B WAT 226 4 HOH HOH 226 B WAT 228 4 HOH HOH 228 B WAT 231 4 HOH HOH 231 B WAT 232 4 HOH HOH 232 B WAT 237 4 HOH HOH 237 B WAT 238 4 HOH HOH 238 B WAT 239 4 HOH HOH 239 B WAT 241 4 HOH HOH 241 B WAT 243 4 HOH HOH 243 B WAT 246 4 HOH HOH 246 B WAT 250 4 HOH HOH 250 B WAT 259 4 HOH HOH 259 B WAT 260 4 HOH HOH 260 B WAT 261 4 HOH HOH 261 B WAT 262 4 HOH HOH 262 B WAT 267 4 HOH HOH 267 B LYS 1 n 1 LYS 1 A GLU 2 n 2 GLU 2 A THR 3 n 3 THR 3 A ALA 4 n 4 ALA 4 A ALA 5 n 5 ALA 5 A ALA 6 n 6 ALA 6 A LYS 7 n 7 LYS 7 A PHE 8 n 8 PHE 8 A GLU 9 n 9 GLU 9 A ARG 10 n 10 ARG 10 A GLN 11 n 11 GLN 11 A HIS 12 n 12 HIS 12 A MET 13 n 13 MET 13 A ASP 14 n 14 ASP 14 A SER 15 n 15 SER 15 A SER 15 n 16 NH2 16 A n 1 21 B n 2 22 B n 3 23 B ASN 24 n 4 ASN 24 B TYR 25 n 5 TYR 25 B CYS 26 n 6 CYS 26 B ASN 27 n 7 ASN 27 B GLN 28 n 8 GLN 28 B MET 29 n 9 MET 29 B MET 30 n 10 MET 30 B LYS 31 n 11 LYS 31 B SER 32 n 12 SER 32 B ARG 33 n 13 ARG 33 B ASN 34 n 14 ASN 34 B LEU 35 n 15 LEU 35 B THR 36 n 16 THR 36 B LYS 37 n 17 LYS 37 B ASP 38 n 18 ASP 38 B ARG 39 n 19 ARG 39 B CYS 40 n 20 CYS 40 B LYS 41 n 21 LYS 41 B PRO 42 n 22 PRO 42 B VAL 43 n 23 VAL 43 B ASN 44 n 24 ASN 44 B THR 45 n 25 THR 45 B PHE 46 n 26 PHE 46 B VAL 47 n 27 VAL 47 B HIS 48 n 28 HIS 48 B GLU 49 n 29 GLU 49 B SER 50 n 30 SER 50 B LEU 51 n 31 LEU 51 B ALA 52 n 32 ALA 52 B ASP 53 n 33 ASP 53 B VAL 54 n 34 VAL 54 B GLN 55 n 35 GLN 55 B ALA 56 n 36 ALA 56 B VAL 57 n 37 VAL 57 B CYS 58 n 38 CYS 58 B SER 59 n 39 SER 59 B GLN 60 n 40 GLN 60 B LYS 61 n 41 LYS 61 B ASN 62 n 42 ASN 62 B VAL 63 n 43 VAL 63 B ALA 64 n 44 ALA 64 B CYS 65 n 45 CYS 65 B LYS 66 n 46 LYS 66 B ASN 67 n 47 ASN 67 B GLY 68 n 48 GLY 68 B GLN 69 n 49 GLN 69 B THR 70 n 50 THR 70 B ASN 71 n 51 ASN 71 B CYS 72 n 52 CYS 72 B TYR 73 n 53 TYR 73 B GLN 74 n 54 GLN 74 B SER 75 n 55 SER 75 B TYR 76 n 56 TYR 76 B SER 77 n 57 SER 77 B THR 78 n 58 THR 78 B MET 79 n 59 MET 79 B SER 80 n 60 SER 80 B ILE 81 n 61 ILE 81 B THR 82 n 62 THR 82 B ASP 83 n 63 ASP 83 B CYS 84 n 64 CYS 84 B ARG 85 n 65 ARG 85 B GLU 86 n 66 GLU 86 B THR 87 n 67 THR 87 B GLY 88 n 68 GLY 88 B SER 89 n 69 SER 89 B SER 90 n 70 SER 90 B LYS 91 n 71 LYS 91 B TYR 92 n 72 TYR 92 B PRO 93 n 73 PRO 93 B ASN 94 n 74 ASN 94 B CYS 95 n 75 CYS 95 B ALA 96 n 76 ALA 96 B TYR 97 n 77 TYR 97 B LYS 98 n 78 LYS 98 B THR 99 n 79 THR 99 B THR 100 n 80 THR 100 B GLN 101 n 81 GLN 101 B ALA 102 n 82 ALA 102 B ASN 103 n 83 ASN 103 B LYS 104 n 84 LYS 104 B HIS 105 n 85 HIS 105 B ILE 106 n 86 ILE 106 B ILE 107 n 87 ILE 107 B VAL 108 n 88 VAL 108 B ALA 109 n 89 ALA 109 B CYS 110 n 90 CYS 110 B GLU 111 n 91 GLU 111 B GLY 112 n 92 GLY 112 B ASN 113 n 93 ASN 113 B PRO 114 n 94 PRO 114 B TYR 115 n 95 TYR 115 B VAL 116 n 96 VAL 116 B PRO 117 n 97 PRO 117 B VAL 118 n 98 VAL 118 B HIS 119 n 99 HIS 119 B PHE 120 n 100 PHE 120 B ASP 121 n 101 ASP 121 B ALA 122 n 102 ALA 122 B SER 123 n 103 SER 123 B VAL 124 n 104 VAL 124 B author_and_software_defined_assembly PISA 2 dimeric software_defined_assembly PISA 4 tetrameric 1720 -23 6430 5400 -51 10900 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -0.5000000000 0.8660254038 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 4_555 y,x,-z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 B N VAL 124 B N VAL 104 B O HIS 105 B O HIS 85 B O VAL 108 B O VAL 88 B N TYR 73 B N TYR 53 B N GLN 74 B N GLN 54 B O LYS 61 B O LYS 41 B N VAL 124 B N VAL 104 B O HIS 105 B O HIS 85 B O LYS 104 B O LYS 84 B N MET 79 B N MET 59 B O CYS 84 B O CYS 64 B N ASN 44 B N ASN 24 1 B SER 21 B SER 1 1 Y 1 B SER 22 B SER 2 1 Y 1 B SER 23 B SER 3 1 Y 1 B ARG 39 177.99 175.21 1 B HIS 48 -96.34 33.16 1 B GLN 60 -98.35 -130.83 1 B ASN 71 -90.55 33.90 20.6 .00 .00 .00 .00 .00 .00 0.282 .012 0.218 0.218 2.10 10.00 564 5378 5300 10.8 75.5 RANDOM 10000000.00 .00 1 RESTRAINED THROUGHOUT 1.0 .35 .26 3.80 .30 .25 2.10 10.00 123 1268 5 0 1140 .007 1.1 28.3 .55 2.47 1.50 3.80 2.00 6.09 2.00 10.35 2.50 0.301 .037 0.27 2.21 66 480 7 12.1 56.9 21.8 2.1 10 1J80 5378 2.0 2.0 0.072 1 7 0.098 2.1 2.3 3 data scaling XDS data reduction XDS model building X-PLOR refinement X-PLOR 3.851 phasing X-PLOR RIBONUCLEASE PANCREATIC (E.C.3.1.27.5) Osmolyte Stabilization of RNase 1 N N 2 N N 3 N N 4 N N 4 N N A THR 3 A THR 3 HELX_P A MET 13 A MET 13 1 1 11 B ASN 24 B ASN 4 HELX_P B ARG 33 B ARG 13 1 2 10 B SER 50 B SER 30 HELX_P B ALA 56 B ALA 36 1 3 7 B VAL 57 B VAL 37 HELX_P B GLN 60 B GLN 40 5 4 4 disulf 2.024 B CYS 26 B SG CYS 6 1_555 B CYS 84 B SG CYS 64 1_555 disulf 2.021 B CYS 40 B SG CYS 20 1_555 B CYS 95 B SG CYS 75 1_555 disulf 2.025 B CYS 58 B SG CYS 38 1_555 B CYS 110 B SG CYS 90 1_555 disulf 2.032 B CYS 65 B SG CYS 45 1_555 B CYS 72 B SG CYS 52 1_555 covale 1.333 A SER 15 A C SER 15 1_555 A NH2 16 A N NH2 16 1_555 HYDROLASE OSMOLYTE SOAKING, SARCOSINE, TRIMETHYLAMINE-N-OXIDE, BETAINE, TAURINE, hydrolase B TYR 92 B TYR 72 1 B PRO 93 B PRO 73 0.23 B ASN 113 B ASN 93 1 B PRO 114 B PRO 94 0.67 RNAS1_BOVIN UNP 1 27 P61823 KETAAAKFERQHMDS RNAS1_BOVIN UNP 2 47 P61823 SSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTT QANKHIIVACEGNPYVPVHFDASV 27 41 1J80 1 15 P61823 A 1 1 15 47 150 1J80 21 124 P61823 B 2 1 104 1 AMIDATION NH2 16 1J80 A P61823 UNP 16 4 4 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel B VAL 116 B VAL 96 B VAL 124 B VAL 104 B TYR 97 B TYR 77 B GLU 111 B GLU 91 B CYS 72 B CYS 52 B GLN 74 B GLN 54 B LYS 61 B LYS 41 B VAL 63 B VAL 43 B VAL 116 B VAL 96 B VAL 124 B VAL 104 B TYR 97 B TYR 77 B GLU 111 B GLU 91 B MET 79 B MET 59 B GLU 86 B GLU 66 B VAL 43 B VAL 23 B VAL 47 B VAL 27 BINDING SITE FOR RESIDUE SO4 B 125 Software 4 A HIS 12 A HIS 12 4 1_555 B HIS 119 B HIS 99 4 1_555 B PHE 120 B PHE 100 4 1_555 B HOH 215 E HOH 4 1_555 152 P 31 2 1