.022422
.012945
.000000
.000000
.025890
.000000
.000000
.000000
.010190
.00000
.00000
.00000
Ratnaparkhi, G.S.
Varadarajan, R.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
44.600
44.600
98.140
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
H2 N
16.023
AMINO GROUP
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
276
28789
28798
10.1074/jbc.M101906200
11373282
Osmolytes stabilize ribonuclease S by stabilizing its fragments S protein and S peptide to compact folding-competent states.
2001
1.000000
.000000
.000000
.000000
1.000000
.000000
.000000
.000000
1.000000
.00000
.00000
.00000
293.0
1
IMAGE PLATE
1998-08-26
MARRESEARCH
mirrors
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
1750.952
RIBONUCLEASE PANCREATIC
3.1.27.5
S PEPTIDE
1
syn
polymer
11555.981
RIBONUCLEASE PANCREATIC
3.1.27.5
S PROTEIN
1
nat
polymer
96.063
SULFATE ION
1
syn
non-polymer
18.015
water
41
nat
water
RNASE S
RNASE S
no
yes
KETAAAKFERQHMDS(NH2)
KETAAAKFERQHMDSX
A
polypeptide(L)
no
no
SSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTT
QANKHIIVACEGNPYVPVHFDASV
SSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTT
QANKHIIVACEGNPYVPVHFDASV
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
cattle
Bos
sample
9913
pancreas
Bos taurus
2.12
41.89
VAPOR DIFFUSION, HANGING DROP
4.75
Ammonium Sulfate, cesium Chloride, pH 4.75, VAPOR DIFFUSION, HANGING DROP, temperature 293.0K
293.0
software
repository
Initial release
Version format compliance
Version format compliance
Refinement description
1
0
2001-06-06
1
1
2008-04-27
1
2
2011-07-13
1
3
2017-10-04
1J7Z is RIBONUCLEASE PANCREATIC
RCSB
Y
RCSB
2001-05-19
REL
REL
SO4
SULFATE ION
HOH
water
This peptide was chemically synthesized. It is naturally found in Bos Taurus
sample
SO4
125
3
SO4
SO4
125
B
WAT
202
4
HOH
HOH
202
A
WAT
222
4
HOH
HOH
222
A
WAT
223
4
HOH
HOH
223
A
WAT
227
4
HOH
HOH
227
A
WAT
229
4
HOH
HOH
229
A
WAT
247
4
HOH
HOH
247
A
WAT
249
4
HOH
HOH
249
A
WAT
201
4
HOH
HOH
201
B
WAT
203
4
HOH
HOH
203
B
WAT
204
4
HOH
HOH
204
B
WAT
205
4
HOH
HOH
205
B
WAT
206
4
HOH
HOH
206
B
WAT
207
4
HOH
HOH
207
B
WAT
208
4
HOH
HOH
208
B
WAT
209
4
HOH
HOH
209
B
WAT
210
4
HOH
HOH
210
B
WAT
211
4
HOH
HOH
211
B
WAT
212
4
HOH
HOH
212
B
WAT
213
4
HOH
HOH
213
B
WAT
214
4
HOH
HOH
214
B
WAT
215
4
HOH
HOH
215
B
WAT
216
4
HOH
HOH
216
B
WAT
217
4
HOH
HOH
217
B
WAT
221
4
HOH
HOH
221
B
WAT
224
4
HOH
HOH
224
B
WAT
226
4
HOH
HOH
226
B
WAT
228
4
HOH
HOH
228
B
WAT
231
4
HOH
HOH
231
B
WAT
232
4
HOH
HOH
232
B
WAT
237
4
HOH
HOH
237
B
WAT
238
4
HOH
HOH
238
B
WAT
239
4
HOH
HOH
239
B
WAT
241
4
HOH
HOH
241
B
WAT
243
4
HOH
HOH
243
B
WAT
246
4
HOH
HOH
246
B
WAT
250
4
HOH
HOH
250
B
WAT
259
4
HOH
HOH
259
B
WAT
260
4
HOH
HOH
260
B
WAT
261
4
HOH
HOH
261
B
WAT
262
4
HOH
HOH
262
B
WAT
267
4
HOH
HOH
267
B
LYS
1
n
1
LYS
1
A
GLU
2
n
2
GLU
2
A
THR
3
n
3
THR
3
A
ALA
4
n
4
ALA
4
A
ALA
5
n
5
ALA
5
A
ALA
6
n
6
ALA
6
A
LYS
7
n
7
LYS
7
A
PHE
8
n
8
PHE
8
A
GLU
9
n
9
GLU
9
A
ARG
10
n
10
ARG
10
A
GLN
11
n
11
GLN
11
A
HIS
12
n
12
HIS
12
A
MET
13
n
13
MET
13
A
ASP
14
n
14
ASP
14
A
SER
15
n
15
SER
15
A
SER
15
n
16
NH2
16
A
n
1
21
B
n
2
22
B
n
3
23
B
ASN
24
n
4
ASN
24
B
TYR
25
n
5
TYR
25
B
CYS
26
n
6
CYS
26
B
ASN
27
n
7
ASN
27
B
GLN
28
n
8
GLN
28
B
MET
29
n
9
MET
29
B
MET
30
n
10
MET
30
B
LYS
31
n
11
LYS
31
B
SER
32
n
12
SER
32
B
ARG
33
n
13
ARG
33
B
ASN
34
n
14
ASN
34
B
LEU
35
n
15
LEU
35
B
THR
36
n
16
THR
36
B
LYS
37
n
17
LYS
37
B
ASP
38
n
18
ASP
38
B
ARG
39
n
19
ARG
39
B
CYS
40
n
20
CYS
40
B
LYS
41
n
21
LYS
41
B
PRO
42
n
22
PRO
42
B
VAL
43
n
23
VAL
43
B
ASN
44
n
24
ASN
44
B
THR
45
n
25
THR
45
B
PHE
46
n
26
PHE
46
B
VAL
47
n
27
VAL
47
B
HIS
48
n
28
HIS
48
B
GLU
49
n
29
GLU
49
B
SER
50
n
30
SER
50
B
LEU
51
n
31
LEU
51
B
ALA
52
n
32
ALA
52
B
ASP
53
n
33
ASP
53
B
VAL
54
n
34
VAL
54
B
GLN
55
n
35
GLN
55
B
ALA
56
n
36
ALA
56
B
VAL
57
n
37
VAL
57
B
CYS
58
n
38
CYS
58
B
SER
59
n
39
SER
59
B
GLN
60
n
40
GLN
60
B
LYS
61
n
41
LYS
61
B
ASN
62
n
42
ASN
62
B
VAL
63
n
43
VAL
63
B
ALA
64
n
44
ALA
64
B
CYS
65
n
45
CYS
65
B
LYS
66
n
46
LYS
66
B
ASN
67
n
47
ASN
67
B
GLY
68
n
48
GLY
68
B
GLN
69
n
49
GLN
69
B
THR
70
n
50
THR
70
B
ASN
71
n
51
ASN
71
B
CYS
72
n
52
CYS
72
B
TYR
73
n
53
TYR
73
B
GLN
74
n
54
GLN
74
B
SER
75
n
55
SER
75
B
TYR
76
n
56
TYR
76
B
SER
77
n
57
SER
77
B
THR
78
n
58
THR
78
B
MET
79
n
59
MET
79
B
SER
80
n
60
SER
80
B
ILE
81
n
61
ILE
81
B
THR
82
n
62
THR
82
B
ASP
83
n
63
ASP
83
B
CYS
84
n
64
CYS
84
B
ARG
85
n
65
ARG
85
B
GLU
86
n
66
GLU
86
B
THR
87
n
67
THR
87
B
GLY
88
n
68
GLY
88
B
SER
89
n
69
SER
89
B
SER
90
n
70
SER
90
B
LYS
91
n
71
LYS
91
B
TYR
92
n
72
TYR
92
B
PRO
93
n
73
PRO
93
B
ASN
94
n
74
ASN
94
B
CYS
95
n
75
CYS
95
B
ALA
96
n
76
ALA
96
B
TYR
97
n
77
TYR
97
B
LYS
98
n
78
LYS
98
B
THR
99
n
79
THR
99
B
THR
100
n
80
THR
100
B
GLN
101
n
81
GLN
101
B
ALA
102
n
82
ALA
102
B
ASN
103
n
83
ASN
103
B
LYS
104
n
84
LYS
104
B
HIS
105
n
85
HIS
105
B
ILE
106
n
86
ILE
106
B
ILE
107
n
87
ILE
107
B
VAL
108
n
88
VAL
108
B
ALA
109
n
89
ALA
109
B
CYS
110
n
90
CYS
110
B
GLU
111
n
91
GLU
111
B
GLY
112
n
92
GLY
112
B
ASN
113
n
93
ASN
113
B
PRO
114
n
94
PRO
114
B
TYR
115
n
95
TYR
115
B
VAL
116
n
96
VAL
116
B
PRO
117
n
97
PRO
117
B
VAL
118
n
98
VAL
118
B
HIS
119
n
99
HIS
119
B
PHE
120
n
100
PHE
120
B
ASP
121
n
101
ASP
121
B
ALA
122
n
102
ALA
122
B
SER
123
n
103
SER
123
B
VAL
124
n
104
VAL
124
B
author_and_software_defined_assembly
PISA
2
dimeric
software_defined_assembly
PISA
4
tetrameric
1720
-23
6430
5400
-51
10900
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
0.8660254038
0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
4_555
y,x,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
B
N
VAL
124
B
N
VAL
104
B
O
HIS
105
B
O
HIS
85
B
O
VAL
108
B
O
VAL
88
B
N
TYR
73
B
N
TYR
53
B
N
GLN
74
B
N
GLN
54
B
O
LYS
61
B
O
LYS
41
B
N
VAL
124
B
N
VAL
104
B
O
HIS
105
B
O
HIS
85
B
O
LYS
104
B
O
LYS
84
B
N
MET
79
B
N
MET
59
B
O
CYS
84
B
O
CYS
64
B
N
ASN
44
B
N
ASN
24
1
B
SER
21
B
SER
1
1
Y
1
B
SER
22
B
SER
2
1
Y
1
B
SER
23
B
SER
3
1
Y
1
B
ARG
39
177.99
175.21
1
B
HIS
48
-96.34
33.16
1
B
GLN
60
-98.35
-130.83
1
B
ASN
71
-90.55
33.90
20.6
.00
.00
.00
.00
.00
.00
0.282
.012
0.218
0.218
2.10
10.00
564
5378
5300
10.8
75.5
RANDOM
10000000.00
.00
1
RESTRAINED
THROUGHOUT
1.0
.35
.26
3.80
.30
.25
2.10
10.00
123
1268
5
0
1140
.007
1.1
28.3
.55
2.47
1.50
3.80
2.00
6.09
2.00
10.35
2.50
0.301
.037
0.27
2.21
66
480
7
12.1
56.9
21.8
2.1
10
1J80
5378
2.0
2.0
0.072
1
7
0.098
2.1
2.3
3
data scaling
XDS
data reduction
XDS
model building
X-PLOR
refinement
X-PLOR
3.851
phasing
X-PLOR
RIBONUCLEASE PANCREATIC (E.C.3.1.27.5)
Osmolyte Stabilization of RNase
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
A
THR
3
A
THR
3
HELX_P
A
MET
13
A
MET
13
1
1
11
B
ASN
24
B
ASN
4
HELX_P
B
ARG
33
B
ARG
13
1
2
10
B
SER
50
B
SER
30
HELX_P
B
ALA
56
B
ALA
36
1
3
7
B
VAL
57
B
VAL
37
HELX_P
B
GLN
60
B
GLN
40
5
4
4
disulf
2.024
B
CYS
26
B
SG
CYS
6
1_555
B
CYS
84
B
SG
CYS
64
1_555
disulf
2.021
B
CYS
40
B
SG
CYS
20
1_555
B
CYS
95
B
SG
CYS
75
1_555
disulf
2.025
B
CYS
58
B
SG
CYS
38
1_555
B
CYS
110
B
SG
CYS
90
1_555
disulf
2.032
B
CYS
65
B
SG
CYS
45
1_555
B
CYS
72
B
SG
CYS
52
1_555
covale
1.333
A
SER
15
A
C
SER
15
1_555
A
NH2
16
A
N
NH2
16
1_555
HYDROLASE
OSMOLYTE SOAKING, SARCOSINE, TRIMETHYLAMINE-N-OXIDE, BETAINE, TAURINE, hydrolase
B
TYR
92
B
TYR
72
1
B
PRO
93
B
PRO
73
0.23
B
ASN
113
B
ASN
93
1
B
PRO
114
B
PRO
94
0.67
RNAS1_BOVIN
UNP
1
27
P61823
KETAAAKFERQHMDS
RNAS1_BOVIN
UNP
2
47
P61823
SSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTT
QANKHIIVACEGNPYVPVHFDASV
27
41
1J80
1
15
P61823
A
1
1
15
47
150
1J80
21
124
P61823
B
2
1
104
1
AMIDATION
NH2
16
1J80
A
P61823
UNP
16
4
4
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
B
VAL
116
B
VAL
96
B
VAL
124
B
VAL
104
B
TYR
97
B
TYR
77
B
GLU
111
B
GLU
91
B
CYS
72
B
CYS
52
B
GLN
74
B
GLN
54
B
LYS
61
B
LYS
41
B
VAL
63
B
VAL
43
B
VAL
116
B
VAL
96
B
VAL
124
B
VAL
104
B
TYR
97
B
TYR
77
B
GLU
111
B
GLU
91
B
MET
79
B
MET
59
B
GLU
86
B
GLU
66
B
VAL
43
B
VAL
23
B
VAL
47
B
VAL
27
BINDING SITE FOR RESIDUE SO4 B 125
Software
4
A
HIS
12
A
HIS
12
4
1_555
B
HIS
119
B
HIS
99
4
1_555
B
PHE
120
B
PHE
100
4
1_555
B
HOH
215
E
HOH
4
1_555
152
P 31 2 1