0.040323 0.000000 0.000000 0.000000 0.024814 0.000000 0.000000 0.000000 0.015267 0.00000 0.00000 0.00000 Hossain, M.T. Sunami, T. Tsunoda, M. Hikima, T. Chatake, T. Ueno, Y. Matsuda, A. Takenaka, A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 24.8 40.3 65.5 C10 H16 N3 O8 P 337.223 n N4-METHOXY-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking H2 O 18.015 WATER non-polymer Mg 2 24.305 MAGNESIUM ION non-polymer N 1 N N N 2 N C N 3 N N N 4 N C N 5 N C N 6 N C N 7 N O N 8 N N N 9 R C N 10 N C N 11 N C N 12 S C N 13 R C N 14 N O N 15 N O N 16 N C N 17 N O N 18 N P N 19 N O N 20 N O N 21 N O N 22 N O N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N O N 40 N P N 41 N O N 42 N O N 43 N O N 44 N C N 45 R C N 46 N O N 47 S C N 48 N O N 49 N C N 50 R C Y 51 N N Y 52 N C Y 53 N N Y 54 N C Y 55 N C N 56 N N Y 57 N N Y 58 N C Y 59 N N Y 60 N C N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N O N 76 N P N 77 N O N 78 N O N 79 N O N 80 N C N 81 R C N 82 N O N 83 S C N 84 N O N 85 N C N 86 R C N 87 N N N 88 N C N 89 N O N 90 N N N 91 N C N 92 N N N 93 N C N 94 N C N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N O N 110 N P N 111 N O N 112 N O N 113 N O N 114 N C N 115 R C N 116 N O N 117 S C N 118 N O N 119 N C N 120 R C Y 121 N N Y 122 N C Y 123 N N Y 124 N C N 125 N C N 126 N O N 127 N N N 128 N C N 129 N N N 130 N N Y 131 N C N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N O N 147 N P N 148 N O N 149 N O N 150 N O N 151 N C N 152 R C N 153 N O N 154 S C N 155 N O N 156 N C N 157 R C N 158 N N N 159 N C N 160 N O N 161 N N N 162 N C N 163 N O N 164 N C N 165 N C N 166 N C N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N O N 183 N H N 184 N H N 185 N MG N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N doub N 6 N doub N 7 N sing N 8 N sing N 9 N doub N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N doub N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N doub N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing Y 63 N sing Y 64 N sing Y 65 N doub N 66 N sing Y 67 N sing Y 68 N sing Y 69 N doub N 70 N sing Y 71 N doub N 72 N sing N 73 N sing Y 74 N sing Y 75 N doub N 76 N sing Y 77 N sing N 78 N sing N 79 N sing N 80 N doub N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N doub N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N doub N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N doub N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing Y 136 N sing Y 137 N sing Y 138 N doub N 139 N sing Y 140 N sing N 141 N sing Y 142 N doub N 143 N doub N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N doub N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N doub N 178 N sing N 179 N sing N 180 N sing N 181 N doub N 182 N sing N 183 N sing N 184 N doub N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing UK Nucleic Acids Res. NARHAD 0389 0305-1048 29 3949 3954 11574676 Crystallographic studies on damaged DNAs IV. N(4)-methoxycytosine shows a second face for Watson-Crick base-pairing, leading to purine transition mutagenesis. 2001 10.2210/pdb1j8l/pdb pdb_00001j8l 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 DIFFRACTOMETER 2000-12-12 WEISSENBERG SINGLE WAVELENGTH M x-ray 1 1.0 1.0 BL-18B Photon Factory 1.0 SYNCHROTRON PHOTON FACTORY BEAMLINE BL-18B 3677.419 DNA (5'-D(*CP*GP*CP*AP*AP*AP*TP*TP*(C45)P*GP*CP*G)-3') 2 syn polymer 24.305 MAGNESIUM ION 1 syn non-polymer 18.015 water 111 nat water no yes (DC)(DG)(DC)(DA)(DA)(DA)(DT)(DT)(C45)(DG)(DC)(DG) CGCAAATTCGCG A,B polydeoxyribonucleotide n n n n n n n n n n n n 1 2.15 42.77 VAPOR DIFFUSION, HANGING DROP 7.0 MPD, spermine, magnesium acetate, sodium cacodylate, sodum chloride, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K 277 MPD 1 spermine 1 magnesium acetate 1 sodium cacodylate 1 sodum chloride 1 2.188 1 19 A 1 B 24 0.910 A_DC1:DG24_B 1 -15.862 0.406 0.190 -0.233 2.709 1 19 A 2 B 23 -2.357 A_DG2:DC23_B 2 -9.982 -0.317 0.409 -0.249 1.814 1 19 A 3 B 22 -0.103 A_DC3:DG22_B 3 -2.184 -0.061 0.044 -0.156 10.212 1 20 A 5 B 20 4.339 A_DA5:DT20_B 4 -16.948 0.077 0.311 -0.137 3.773 1 20 A 6 B 19 5.175 A_DA6:DT19_B 5 -17.869 0.004 0.264 -0.105 -2.425 1 20 A 7 B 18 4.494 A_DT7:DA18_B 6 -17.854 -0.010 0.200 -0.099 -9.314 1 20 A 8 B 17 4.325 A_DT8:DA17_B 7 -14.363 -0.082 0.190 -0.144 5.260 1 19 A 10 B 15 3.937 A_DG10:DC15_B 8 -5.873 -0.041 0.140 -0.129 1.248 1 19 A 11 B 14 -4.345 A_DC11:DG14_B 9 -16.442 0.064 0.318 -0.159 3.782 1 19 A 12 B 13 -2.558 A_DG12:DC13_B 10 -5.284 -0.133 0.250 -0.230 3.298 35.862 A A 1 2 5.289 B B 24 23 3.286 3.248 -0.285 0.141 AA_DC1DG2:DC23DG24_BB 1 -3.419 5.567 35.561 -0.241 -0.032 3.383 40.002 A A 2 3 -7.341 B B 23 22 3.420 -5.005 0.691 0.454 AA_DG2DC3:DG22DC23_BB 2 3.186 -4.674 39.577 1.264 -0.628 6.479 65.648 A A 3 5 3.183 B B 22 20 6.472 3.449 0.111 0.287 AA_DC3DA5:DT20DG22_BB 3 1.354 -1.249 65.555 -0.015 0.007 3.369 36.659 A A 5 6 -0.210 B B 20 19 3.367 -0.132 0.147 -0.415 AA_DA5DA6:DT19DT20_BB 4 -0.025 0.039 36.658 -0.642 -0.238 3.336 31.931 A A 6 7 -0.526 B B 19 18 3.330 -0.289 -0.066 -0.710 AA_DA6DT7:DA18DT19_BB 5 0.246 -0.446 31.928 -1.238 0.164 3.399 35.295 A A 7 8 -2.833 B B 18 17 3.384 -1.717 -0.227 -0.431 AA_DT7DT8:DA17DA18_BB 6 0.237 -0.392 35.254 -0.447 0.411 6.248 69.511 A A 8 10 -4.079 B B 17 15 6.313 -4.647 -0.220 0.983 AA_DT8DG10:DC15DA17_BB 7 -2.501 2.195 69.335 1.185 0.019 3.374 42.907 A A 10 11 -13.653 B B 15 14 3.455 -9.890 -1.267 0.448 AA_DG10DC11:DG14DC15_BB 8 -4.206 5.806 41.600 1.656 1.288 3.359 37.043 A A 11 12 0.177 B B 14 13 3.309 0.112 0.674 0.471 AA_DC11DG12:DC13DG14_BB 9 3.640 -5.739 36.869 0.726 -0.561 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_struct_conn_angle struct_conn struct_conn_type struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations Refinement description 1 0 2001-09-28 1 1 2007-10-16 1 2 2011-07-13 1 3 2023-08-16 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.value _struct_conn.conn_type_id _struct_conn.id _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn_type.id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Molecular and Crystal Structure of D(CGCGAATT(MO4)CGCG) Molecular and Crystal Structure of D(CGCGAATT(MO4)CGCG) RCSB Y RCSB 2001-05-22 REL REL MG MAGNESIUM ION HOH water 355D PDB ENTRY 355D PDB experimental model MO6 106 2 MG MG 106 A MO6 106 3 HOH HOH 107 A MO6 106 3 HOH HOH 108 A MO6 106 3 HOH HOH 109 A MO6 106 3 HOH HOH 110 A HOH 1 3 HOH HOH 111 A HOH 4 3 HOH HOH 112 A HOH 5 3 HOH HOH 113 A HOH 7 3 HOH HOH 114 A HOH 10 3 HOH HOH 115 A HOH 13 3 HOH HOH 116 A HOH 15 3 HOH HOH 117 A HOH 16 3 HOH HOH 118 A HOH 17 3 HOH HOH 119 A HOH 18 3 HOH HOH 120 A HOH 19 3 HOH HOH 121 A HOH 23 3 HOH HOH 122 A HOH 30 3 HOH HOH 123 A HOH 40 3 HOH HOH 124 A HOH 42 3 HOH HOH 125 A HOH 44 3 HOH HOH 126 A HOH 47 3 HOH HOH 127 A HOH 50 3 HOH HOH 128 A HOH 52 3 HOH HOH 129 A HOH 54 3 HOH HOH 130 A HOH 55 3 HOH HOH 131 A HOH 57 3 HOH HOH 132 A HOH 63 3 HOH HOH 133 A HOH 64 3 HOH HOH 134 A HOH 68 3 HOH HOH 135 A HOH 70 3 HOH HOH 136 A HOH 72 3 HOH HOH 137 A HOH 73 3 HOH HOH 138 A HOH 74 3 HOH HOH 139 A HOH 75 3 HOH HOH 140 A HOH 79 3 HOH HOH 141 A HOH 80 3 HOH HOH 142 A HOH 81 3 HOH HOH 143 A HOH 82 3 HOH HOH 144 A HOH 84 3 HOH HOH 145 A HOH 86 3 HOH HOH 146 A HOH 88 3 HOH HOH 147 A HOH 89 3 HOH HOH 148 A HOH 91 3 HOH HOH 149 A HOH 92 3 HOH HOH 150 A HOH 94 3 HOH HOH 151 A HOH 95 3 HOH HOH 152 A HOH 97 3 HOH HOH 153 A HOH 99 3 HOH HOH 154 A HOH 100 3 HOH HOH 155 A HOH 102 3 HOH HOH 156 A HOH 103 3 HOH HOH 157 A HOH 104 3 HOH HOH 158 A MO6 106 3 HOH HOH 107 B MO6 106 3 HOH HOH 108 B HOH 2 3 HOH HOH 109 B HOH 3 3 HOH HOH 110 B HOH 6 3 HOH HOH 111 B HOH 8 3 HOH HOH 112 B HOH 9 3 HOH HOH 113 B HOH 11 3 HOH HOH 114 B HOH 12 3 HOH HOH 115 B HOH 14 3 HOH HOH 116 B HOH 20 3 HOH HOH 117 B HOH 21 3 HOH HOH 118 B HOH 22 3 HOH HOH 119 B HOH 24 3 HOH HOH 120 B HOH 25 3 HOH HOH 121 B HOH 26 3 HOH HOH 122 B HOH 27 3 HOH HOH 123 B HOH 28 3 HOH HOH 124 B HOH 29 3 HOH HOH 125 B HOH 31 3 HOH HOH 126 B HOH 32 3 HOH HOH 127 B HOH 33 3 HOH HOH 128 B HOH 34 3 HOH HOH 129 B HOH 35 3 HOH HOH 130 B HOH 36 3 HOH HOH 131 B HOH 37 3 HOH HOH 132 B HOH 38 3 HOH HOH 133 B HOH 39 3 HOH HOH 134 B HOH 41 3 HOH HOH 135 B HOH 43 3 HOH HOH 136 B HOH 45 3 HOH HOH 137 B HOH 46 3 HOH HOH 138 B HOH 48 3 HOH HOH 139 B HOH 49 3 HOH HOH 140 B HOH 51 3 HOH HOH 141 B HOH 53 3 HOH HOH 142 B HOH 56 3 HOH HOH 143 B HOH 58 3 HOH HOH 144 B HOH 59 3 HOH HOH 145 B HOH 60 3 HOH HOH 146 B HOH 61 3 HOH HOH 147 B HOH 62 3 HOH HOH 148 B HOH 65 3 HOH HOH 149 B HOH 66 3 HOH HOH 150 B HOH 67 3 HOH HOH 151 B HOH 69 3 HOH HOH 152 B HOH 71 3 HOH HOH 153 B HOH 76 3 HOH HOH 154 B HOH 77 3 HOH HOH 155 B HOH 78 3 HOH HOH 156 B HOH 83 3 HOH HOH 157 B HOH 85 3 HOH HOH 158 B HOH 87 3 HOH HOH 159 B HOH 90 3 HOH HOH 160 B HOH 93 3 HOH HOH 161 B HOH 96 3 HOH HOH 162 B HOH 98 3 HOH HOH 163 B HOH 101 3 HOH HOH 164 B HOH 105 3 HOH HOH 165 B C 1 n 1 DC 1 A G 2 n 2 DG 2 A C 3 n 3 DC 3 A A 4 n 4 DA 4 A A 5 n 5 DA 5 A A 6 n 6 DA 6 A T 7 n 7 DT 7 A T 8 n 8 DT 8 A +C 9 n 9 C45 9 A G 10 n 10 DG 10 A C 11 n 11 DC 11 A G 12 n 12 DG 12 A C 13 n 1 DC 13 B G 14 n 2 DG 14 B C 15 n 3 DC 15 B A 16 n 4 DA 16 B A 17 n 5 DA 17 B A 18 n 6 DA 18 B T 19 n 7 DT 19 B T 20 n 8 DT 20 B +C 21 n 9 C45 21 B G 22 n 10 DG 22 B C 23 n 11 DC 23 B G 24 n 12 DG 24 B author_defined_assembly 2 dimeric A HOH 107 D O HOH 1_555 A MG 106 C MG MG 1_555 A HOH 108 D O HOH 1_555 90.4 A HOH 107 D O HOH 1_555 A MG 106 C MG MG 1_555 A HOH 109 D O HOH 1_555 89.8 A HOH 108 D O HOH 1_555 A MG 106 C MG MG 1_555 A HOH 109 D O HOH 1_555 89.6 A HOH 107 D O HOH 1_555 A MG 106 C MG MG 1_555 A HOH 110 D O HOH 1_555 89.9 A HOH 108 D O HOH 1_555 A MG 106 C MG MG 1_555 A HOH 110 D O HOH 1_555 90.1 A HOH 109 D O HOH 1_555 A MG 106 C MG MG 1_555 A HOH 110 D O HOH 1_555 179.6 A HOH 107 D O HOH 1_555 A MG 106 C MG MG 1_555 B HOH 107 E O HOH 1_555 179.6 A HOH 108 D O HOH 1_555 A MG 106 C MG MG 1_555 B HOH 107 E O HOH 1_555 90.0 A HOH 109 D O HOH 1_555 A MG 106 C MG MG 1_555 B HOH 107 E O HOH 1_555 90.3 A HOH 110 D O HOH 1_555 A MG 106 C MG MG 1_555 B HOH 107 E O HOH 1_555 90.0 A HOH 107 D O HOH 1_555 A MG 106 C MG MG 1_555 B HOH 108 E O HOH 1_555 89.8 A HOH 108 D O HOH 1_555 A MG 106 C MG MG 1_555 B HOH 108 E O HOH 1_555 179.7 A HOH 109 D O HOH 1_555 A MG 106 C MG MG 1_555 B HOH 108 E O HOH 1_555 90.1 A HOH 110 D O HOH 1_555 A MG 106 C MG MG 1_555 B HOH 108 E O HOH 1_555 90.1 B HOH 107 E O HOH 1_555 A MG 106 C MG MG 1_555 B HOH 108 E O HOH 1_555 89.8 A C45 9 A C45 9 DC B C45 21 B C45 9 DC 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 7.27 0.00 0.00 -0.96 0.00 -6.31 0.258 0.218 1.6 10.0 685 6515 RANDOM 1 THROUGHOUT 3.0 MOLECULAR REPLACEMENT PDB ENTRY 355D 0.22 5.0 1.6 10.0 105 600 11 484 0 0.004 0.9 20.7 1.36 0.277 0.124 0.206 1.66 5 5.2 1.6 100 1J8L 62759 7855 0.058 1 8.0 86.1 0.132 1.6 1.69 5.5 38.4 phasing AMoRE refinement CNS 1.0 data reduction MOSFLM data scaling CCP4 (SCALA) Molecular and Crystal Structure of D(CGCAAATTMO4CGCG): the Watson-Crick Type N4-Methoxycytidine/Adenosine Base Pair in B-DNA 1 N N 1 N N 2 N N 3 N N 3 N N covale 1.604 both A DT 8 A O3' DT 8 1_555 A C45 9 A P C45 9 1_555 covale 1.604 one A C45 9 A O3' C45 9 1_555 A DG 10 A P DG 10 1_555 covale 1.608 both B DT 20 B O3' DT 8 1_555 B C45 21 B P C45 9 1_555 covale 1.610 one B C45 21 B O3' C45 9 1_555 B DG 22 B P DG 10 1_555 metalc 2.057 A MG 106 C MG MG 1_555 A HOH 107 D O HOH 1_555 metalc 2.066 A MG 106 C MG MG 1_555 A HOH 108 D O HOH 1_555 metalc 2.063 A MG 106 C MG MG 1_555 A HOH 109 D O HOH 1_555 metalc 2.063 A MG 106 C MG MG 1_555 A HOH 110 D O HOH 1_555 metalc 2.066 A MG 106 C MG MG 1_555 B HOH 107 E O HOH 1_555 metalc 2.069 A MG 106 C MG MG 1_555 B HOH 108 E O HOH 1_555 hydrog WATSON-CRICK A DC 1 A N3 DC 1 1_555 B DG 24 B N1 DG 12 1_555 hydrog WATSON-CRICK A DC 1 A N4 DC 1 1_555 B DG 24 B O6 DG 12 1_555 hydrog WATSON-CRICK A DC 1 A O2 DC 1 1_555 B DG 24 B N2 DG 12 1_555 hydrog WATSON-CRICK A DG 2 A N1 DG 2 1_555 B DC 23 B N3 DC 11 1_555 hydrog WATSON-CRICK A DG 2 A N2 DG 2 1_555 B DC 23 B O2 DC 11 1_555 hydrog WATSON-CRICK A DG 2 A O6 DG 2 1_555 B DC 23 B N4 DC 11 1_555 hydrog WATSON-CRICK A DC 3 A N3 DC 3 1_555 B DG 22 B N1 DG 10 1_555 hydrog WATSON-CRICK A DC 3 A N4 DC 3 1_555 B DG 22 B O6 DG 10 1_555 hydrog WATSON-CRICK A DC 3 A O2 DC 3 1_555 B DG 22 B N2 DG 10 1_555 hydrog WATSON-CRICK A DA 5 A N1 DA 5 1_555 B DT 20 B N3 DT 8 1_555 hydrog WATSON-CRICK A DA 5 A N6 DA 5 1_555 B DT 20 B O4 DT 8 1_555 hydrog WATSON-CRICK A DA 6 A N1 DA 6 1_555 B DT 19 B N3 DT 7 1_555 hydrog WATSON-CRICK A DA 6 A N6 DA 6 1_555 B DT 19 B O4 DT 7 1_555 hydrog WATSON-CRICK A DT 7 A N3 DT 7 1_555 B DA 18 B N1 DA 6 1_555 hydrog WATSON-CRICK A DT 7 A O4 DT 7 1_555 B DA 18 B N6 DA 6 1_555 hydrog WATSON-CRICK A DT 8 A N3 DT 8 1_555 B DA 17 B N1 DA 5 1_555 hydrog WATSON-CRICK A DT 8 A O4 DT 8 1_555 B DA 17 B N6 DA 5 1_555 hydrog WATSON-CRICK A DG 10 A N1 DG 10 1_555 B DC 15 B N3 DC 3 1_555 hydrog WATSON-CRICK A DG 10 A N2 DG 10 1_555 B DC 15 B O2 DC 3 1_555 hydrog WATSON-CRICK A DG 10 A O6 DG 10 1_555 B DC 15 B N4 DC 3 1_555 hydrog WATSON-CRICK A DC 11 A N3 DC 11 1_555 B DG 14 B N1 DG 2 1_555 hydrog WATSON-CRICK A DC 11 A N4 DC 11 1_555 B DG 14 B O6 DG 2 1_555 hydrog WATSON-CRICK A DC 11 A O2 DC 11 1_555 B DG 14 B N2 DG 2 1_555 hydrog WATSON-CRICK A DG 12 A N1 DG 12 1_555 B DC 13 B N3 DC 1 1_555 hydrog WATSON-CRICK A DG 12 A N2 DG 12 1_555 B DC 13 B O2 DC 1 1_555 hydrog WATSON-CRICK A DG 12 A O6 DG 12 1_555 B DC 13 B N4 DC 1 1_555 DNA N4-METHOXYCYTOSINE, DNA DAMAGE, B-DNA, DOUBLE HELIX, DEOXYRIBONUCLEIC ACID, DNA 1J8L PDB 1 1J8L 1 12 1J8L 1 12 1J8L A 1 1 12 13 24 1J8L 13 24 1J8L B 1 1 12 BINDING SITE FOR RESIDUE MG A 106 A MG 106 Software 6 A HOH 107 D HOH 6 1_555 A HOH 108 D HOH 6 1_555 A HOH 109 D HOH 6 1_555 A HOH 110 D HOH 6 1_555 B HOH 107 E HOH 6 1_555 B HOH 108 E HOH 6 1_555 19 P 21 21 21