0.012981 0.000000 0.000481 0.000000 0.014641 0.000000 0.000000 0.000000 0.012758 0.00000 0.00000 0.00000 Huang, M. Ruf, W. Edgington, T.S. Wilson, I.A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 2 90.00 92.12 90.00 77.038 68.302 78.438 C25 H36 Cl N6 O3 1 504.045 D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-phenylalaninamide FFRCK peptide-like C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Ca 2 40.078 CALCIUM ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C6 H12 O5 164.156 beta-L-fucopyranose beta-L-fucose; 6-deoxy-beta-L-galactopyranose; L-fucose; fucose; 6-DEOXY-BETA-L-GALACTOSE L-saccharide, beta linking C6 H12 O6 180.156 alpha-D-glucopyranose alpha-D-glucose; D-glucose; glucose D-saccharide, alpha linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C8 H15 N O6 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE D-saccharide, beta linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 R C N 3 N C N 4 N O N 5 N C Y 6 N C Y 7 N C Y 8 N C Y 9 N C Y 10 N C Y 11 N C N 12 N N N 13 S C N 14 N C N 15 N O N 16 N C Y 17 N C Y 18 N C Y 19 N C Y 20 N C Y 21 N C Y 22 N C N 23 N N N 24 S C N 25 S C N 26 N O N 27 N C N 28 N C N 29 N C N 30 N N N 31 N C N 32 N N N 33 N N N 34 N C N 35 N CL N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N N N 73 S C N 74 N C N 75 N O N 76 N C N 77 N O N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N N N 86 S C N 87 N C N 88 N O N 89 N C N 90 N C N 91 N C N 92 N N N 93 N C N 94 N N N 95 N N N 96 N O N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N N N 113 S C N 114 N C N 115 N O N 116 N C N 117 N C N 118 N O N 119 N N N 120 N O N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N N N 130 S C N 131 N C N 132 N O N 133 N C N 134 N C N 135 N O N 136 N O N 137 N O N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N CA N 146 N N N 147 R C N 148 N C N 149 N O N 150 N C N 151 N S N 152 N O N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 S C N 161 S C N 162 N O N 163 R C N 164 N O N 165 S C N 166 N O N 167 S C N 168 N C N 169 N O N 170 N O N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 S C N 184 R C N 185 S C N 186 S C N 187 R C N 188 N C N 189 N O N 190 N O N 191 N O N 192 N O N 193 N O N 194 N O N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N N N 208 S C N 209 N C N 210 N O N 211 N C N 212 N C N 213 N C N 214 N O N 215 N N N 216 N O N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N N N 228 S C N 229 N C N 230 N O N 231 N C N 232 N C N 233 N C N 234 N O N 235 N O N 236 N O N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N N N 247 N C N 248 N C N 249 N O N 250 N O N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N N N 257 S C N 258 N C N 259 N O N 260 N C Y 261 N C Y 262 N N Y 263 N C Y 264 N C Y 265 N N N 266 N O N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N O N 278 N H N 279 N H N 280 N N N 281 S C N 282 N C N 283 N O N 284 S C N 285 N C N 286 N C N 287 N C N 288 N O N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N N N 303 S C N 304 N C N 305 N O N 306 N C N 307 N C N 308 N C N 309 N C N 310 N O N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N N N 325 S C N 326 N C N 327 N O N 328 N C N 329 N C N 330 N C N 331 N C N 332 N N N 333 N O N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N N N 350 S C N 351 N C N 352 N O N 353 N C N 354 N C N 355 N S N 356 N C N 357 N O N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 R C N 370 R C N 371 R C N 372 S C N 373 R C N 374 N C N 375 N C N 376 N C N 377 N N N 378 N O N 379 N O N 380 N O N 381 N O N 382 N O N 383 N O N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N N N 400 S C N 401 N C N 402 N O N 403 N C Y 404 N C Y 405 N C Y 406 N C Y 407 N C Y 408 N C Y 409 N C N 410 N O N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N N N 423 S C N 424 N C N 425 N O N 426 N C N 427 N C N 428 N C N 429 N O N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N N N 440 S C N 441 N C N 442 N O N 443 N C N 444 N O N 445 N O N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N N N 454 S C N 455 N C N 456 N O N 457 R C N 458 N O N 459 N C N 460 N O N 461 N H N 462 N H N 463 N H N 464 N H N 465 N H N 466 N H N 467 N H N 468 N H N 469 N H N 470 N N N 471 S C N 472 N C N 473 N O N 474 N C Y 475 N C Y 476 N C Y 477 N C Y 478 N N Y 479 N C Y 480 N C Y 481 N C Y 482 N C Y 483 N C N 484 N O N 485 N H N 486 N H N 487 N H N 488 N H N 489 N H N 490 N H N 491 N H N 492 N H N 493 N H N 494 N H N 495 N H N 496 N H N 497 N N N 498 S C N 499 N C N 500 N O N 501 N C Y 502 N C Y 503 N C Y 504 N C Y 505 N C Y 506 N C Y 507 N C N 508 N O N 509 N O N 510 N H N 511 N H N 512 N H N 513 N H N 514 N H N 515 N H N 516 N H N 517 N H N 518 N H N 519 N H N 520 N H N 521 N N N 522 S C N 523 N C N 524 N O N 525 N C N 526 N C N 527 N C N 528 N O N 529 N H N 530 N H N 531 N H N 532 N H N 533 N H N 534 N H N 535 N H N 536 N H N 537 N H N 538 N H N 539 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing Y 12 N doub Y 13 N sing Y 14 N sing N 15 N sing Y 16 N doub N 17 N sing Y 18 N doub N 19 N sing Y 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N doub N 29 N sing N 30 N sing N 31 N sing N 32 N sing Y 33 N doub Y 34 N sing Y 35 N sing N 36 N sing Y 37 N doub N 38 N sing Y 39 N doub N 40 N sing Y 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N doub N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N doub N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N doub N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N doub N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N doub N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N doub N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N doub N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N doub N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N doub N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N doub N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N doub N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N doub N 255 N sing N 256 N sing N 257 N sing N 258 N sing Y 259 N sing Y 260 N doub Y 261 N doub N 262 N sing Y 263 N sing N 264 N sing Y 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N doub N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N doub N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N doub N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N doub N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N doub N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N doub N 393 N sing N 394 N sing N 395 N sing N 396 N sing Y 397 N doub Y 398 N sing Y 399 N sing N 400 N sing Y 401 N doub N 402 N sing Y 403 N doub N 404 N sing Y 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N doub N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N doub N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N doub N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N doub N 462 N sing N 463 N sing N 464 N sing N 465 N sing Y 466 N doub Y 467 N sing Y 468 N sing N 469 N sing Y 470 N doub Y 471 N sing Y 472 N sing N 473 N sing Y 474 N sing Y 475 N doub N 476 N sing Y 477 N doub N 478 N sing Y 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N doub N 490 N sing N 491 N sing N 492 N sing N 493 N sing Y 494 N doub Y 495 N sing Y 496 N sing N 497 N sing Y 498 N doub N 499 N sing Y 500 N doub N 501 N sing Y 502 N sing N 503 N sing N 504 N sing N 505 N sing N 506 N sing N 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N sing N 512 N sing N 513 N doub N 514 N sing N 515 N sing N 516 N sing N 517 N sing N 518 N sing N 519 N sing N 520 N sing N 521 N sing N 522 N sing N 523 N sing N 524 N sing To be Published 0353 Ligand Induced Conformational Transitions of Tissue Factor. Crystal Structure of the Tissue Factor:Factor VIIa Complex. 10.2210/pdb1j9c/pdb pdb_00001j9c 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 177 1 58 cm long, Pt-coated, fused silica, vertical focusmirror IMAGE PLATE 1999-04-04 MACSCIENCE Cyclindrically bent triangular Si(111) asymmetric cut, horizontal focus monochromator SINGLE WAVELENGTH M x-ray 1 1.08 1.0 BL7-1 SSRL 1.08 SYNCHROTRON SSRL BEAMLINE BL7-1 23763.393 Tissue factor 1 man polymer 10371.550 factor VIIa light chain 1 man polymer 28103.256 factor VIIa heavy chain 1 man polymer 180.156 alpha-D-glucopyranose 1 man non-polymer 164.156 beta-L-fucopyranose 1 man non-polymer 504.045 D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-phenylalaninamide 1 syn non-polymer 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose 1 man non-polymer 40.078 CALCIUM ION 1 syn non-polymer 18.015 water 127 nat water TF, COAGULATION FACTOR III no no SGTTNTVAAYNLTWKSTNFKTILEWEPKPVNQVYTVQISTKSGDWKSKCFYTTDTECDLTDEIVKDVKQTYLARVFSYPA GNVESTGSAGEPLYENSPEFTPYLETNLGQPTIQSFEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYWKS SSSGKKTAKTNTNEFLIDVDKGENYCFSVQAVIPSRTVNRKSTDSPVECM SGTTNTVAAYNLTWKSTNFKTILEWEPKPVNQVYTVQISTKSGDWKSKCFYTTDTECDLTDEIVKDVKQTYLARVFSYPA GNVESTGSAGEPLYENSPEFTPYLETNLGQPTIQSFEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYWKS SSSGKKTAKTNTNEFLIDVDKGENYCFSVQAVIPSRTVNRKSTDSPVECM T polypeptide(L) no no DQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSC TPTVEYPCGKIPILE DQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSC TPTVEYPCGKIPILE L polypeptide(L) no no IVGGKVCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCFDKIKNWRNLIAVLGEHDLSEHDGDEQSRRVAQVIIPS TYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGATALELMVLNVPRLMTQDCLQ QSRKVGDSPNITEYMFCAGYSDGSKDSCKGDSGGPHATHYRGTWYLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLMR SEPRPGVLLRAPFP IVGGKVCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCFDKIKNWRNLIAVLGEHDLSEHDGDEQSRRVAQVIIPS TYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGATALELMVLNVPRLMTQDCLQ QSRKVGDSPNITEYMFCAGYSDGSKDSCKGDSGGPHATHYRGTWYLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLMR SEPRPGVLLRAPFP H polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample 9606 Homo sapiens 562 Escherichia coli human Chinese hamster sample 9606 Homo sapiens BHK 10029 Cricetulus griseus human Chinese hamster sample 9606 Homo sapiens BHK 10029 Cricetulus griseus 1 3.29 62.58 VAPOR DIFFUSION, SITTING DROP 7.5 2% PEG 400, 2% 2-propanol, 2% PEG 4000, 12.5mM Calcium chloride, 2.0M ammonium sulfate, 0.1M HEPES, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 295K 295 chem_comp entity pdbx_chem_comp_identifier pdbx_entity_nonpoly struct_conn struct_site struct_site_gen chem_comp chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model repository Initial release Carbohydrate remediation repository Remediation Version format compliance Atomic model Database references Derived calculations Non-polymer description Structure summary Version format compliance Other Data collection Derived calculations Structure summary Data collection Database references Refinement description Structure summary 1 0 2004-07-27 1 1 2008-04-27 1 2 2011-07-13 1 3 2012-12-12 1 4 2020-07-29 1 5 2023-08-16 _chem_comp.name _chem_comp.type _entity.pdbx_description _pdbx_entity_nonpoly.name _struct_conn.conn_type_id _struct_conn.id _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_role _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _chem_comp.pdbx_synonyms _database_2.pdbx_DOI _database_2.pdbx_database_accession LFucpb b-L-fucopyranose b-L-Fucp Fuc DGlcpa a-D-glucopyranose a-D-Glcp Glc DGlcpNAcb N-acetyl-b-D-glucopyranosamine b-D-GlcpNAc GlcNAc RCSB Y RCSB 2001-05-24 REL GLC alpha-D-glucopyranose FUL beta-L-fucopyranose 0Z6 D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-phenylalaninamide NAG 2-acetamido-2-deoxy-beta-D-glucopyranose CA CALCIUM ION HOH water THE UNBOUND FORM OF THE INHIBITOR IS D-PHE-PHE-ARG-CHLOROMETHYLKETONE. UPON REACTION WITH PROTEIN IT FORMS TWO COVALENT BONDS: 1) A COVALENT BOND TO SER 195 FORMING A HEMIKETAL AR7 AND 2) A COVALENT BOND TO NE2 OF HIS 57 1DAN PDB ENTRY 1dan PDB experimental model Inhibitor D-Phe-Phe-Arg Chloromethylketone Peptide-like GLC 52 4 GLC GLC 352 L FUC 60 5 FUL FUL 360 L PHE 1 6 0Z6 0Z6 1 H NAG 175 7 NAG NAG 375 H CA2 1 8 CA CA 376 H WAT 4 9 HOH HOH 211 T WAT 10 9 HOH HOH 212 T WAT 22 9 HOH HOH 213 T WAT 24 9 HOH HOH 214 T WAT 28 9 HOH HOH 215 T WAT 37 9 HOH HOH 216 T WAT 39 9 HOH HOH 217 T WAT 44 9 HOH HOH 218 T WAT 54 9 HOH HOH 219 T WAT 62 9 HOH HOH 220 T WAT 84 9 HOH HOH 221 T WAT 87 9 HOH HOH 222 T WAT 89 9 HOH HOH 223 T WAT 92 9 HOH HOH 224 T WAT 96 9 HOH HOH 225 T WAT 101 9 HOH HOH 226 T WAT 111 9 HOH HOH 227 T WAT 113 9 HOH HOH 228 T WAT 120 9 HOH HOH 229 T WAT 121 9 HOH HOH 230 T WAT 125 9 HOH HOH 231 T WAT 6 9 HOH HOH 361 L WAT 13 9 HOH HOH 362 L WAT 14 9 HOH HOH 363 L WAT 18 9 HOH HOH 364 L WAT 20 9 HOH HOH 365 L WAT 25 9 HOH HOH 366 L WAT 26 9 HOH HOH 367 L WAT 27 9 HOH HOH 368 L WAT 29 9 HOH HOH 369 L WAT 30 9 HOH HOH 370 L WAT 32 9 HOH HOH 371 L WAT 33 9 HOH HOH 372 L WAT 38 9 HOH HOH 373 L WAT 48 9 HOH HOH 374 L WAT 49 9 HOH HOH 375 L WAT 50 9 HOH HOH 376 L WAT 60 9 HOH HOH 377 L WAT 63 9 HOH HOH 378 L WAT 64 9 HOH HOH 379 L WAT 66 9 HOH HOH 380 L WAT 76 9 HOH HOH 381 L WAT 79 9 HOH HOH 382 L WAT 80 9 HOH HOH 383 L WAT 91 9 HOH HOH 384 L WAT 99 9 HOH HOH 385 L WAT 104 9 HOH HOH 386 L WAT 108 9 HOH HOH 387 L WAT 117 9 HOH HOH 388 L WAT 118 9 HOH HOH 389 L WAT 119 9 HOH HOH 390 L WAT 124 9 HOH HOH 391 L WAT 34 9 HOH HOH 258 H WAT 1 9 HOH HOH 377 H WAT 2 9 HOH HOH 378 H WAT 3 9 HOH HOH 379 H WAT 5 9 HOH HOH 380 H WAT 7 9 HOH HOH 381 H WAT 8 9 HOH HOH 382 H WAT 9 9 HOH HOH 383 H WAT 11 9 HOH HOH 384 H WAT 12 9 HOH HOH 385 H WAT 15 9 HOH HOH 386 H WAT 16 9 HOH HOH 387 H WAT 17 9 HOH HOH 388 H WAT 19 9 HOH HOH 389 H WAT 21 9 HOH HOH 390 H WAT 23 9 HOH HOH 391 H WAT 31 9 HOH HOH 392 H WAT 35 9 HOH HOH 393 H WAT 36 9 HOH HOH 394 H WAT 40 9 HOH HOH 395 H WAT 41 9 HOH HOH 396 H WAT 42 9 HOH HOH 397 H WAT 43 9 HOH HOH 398 H WAT 45 9 HOH HOH 399 H WAT 46 9 HOH HOH 400 H WAT 47 9 HOH HOH 401 H WAT 51 9 HOH HOH 402 H WAT 53 9 HOH HOH 403 H WAT 55 9 HOH HOH 404 H WAT 56 9 HOH HOH 405 H WAT 57 9 HOH HOH 406 H WAT 58 9 HOH HOH 407 H WAT 59 9 HOH HOH 408 H WAT 61 9 HOH HOH 409 H WAT 65 9 HOH HOH 410 H WAT 67 9 HOH HOH 411 H WAT 68 9 HOH HOH 412 H WAT 69 9 HOH HOH 413 H WAT 70 9 HOH HOH 414 H WAT 71 9 HOH HOH 415 H WAT 72 9 HOH HOH 416 H WAT 73 9 HOH HOH 417 H WAT 74 9 HOH HOH 418 H WAT 75 9 HOH HOH 419 H WAT 77 9 HOH HOH 420 H WAT 78 9 HOH HOH 421 H WAT 81 9 HOH HOH 422 H WAT 82 9 HOH HOH 423 H WAT 83 9 HOH HOH 424 H WAT 85 9 HOH HOH 425 H WAT 86 9 HOH HOH 426 H WAT 88 9 HOH HOH 427 H WAT 90 9 HOH HOH 428 H WAT 93 9 HOH HOH 429 H WAT 94 9 HOH HOH 430 H WAT 95 9 HOH HOH 431 H WAT 97 9 HOH HOH 432 H WAT 98 9 HOH HOH 433 H WAT 100 9 HOH HOH 434 H WAT 102 9 HOH HOH 435 H WAT 103 9 HOH HOH 436 H WAT 105 9 HOH HOH 437 H WAT 106 9 HOH HOH 438 H WAT 107 9 HOH HOH 439 H WAT 109 9 HOH HOH 440 H WAT 110 9 HOH HOH 441 H WAT 112 9 HOH HOH 442 H WAT 114 9 HOH HOH 443 H WAT 115 9 HOH HOH 444 H WAT 116 9 HOH HOH 445 H WAT 122 9 HOH HOH 446 H WAT 123 9 HOH HOH 447 H WAT 127 9 HOH HOH 448 H WAT 128 9 HOH HOH 449 H WAT 130 9 HOH HOH 450 H SER 1 n 1 SER 1 T GLY 2 n 2 GLY 2 T THR 3 n 3 THR 3 T THR 4 n 4 THR 4 T ASN 5 n 5 ASN 5 T THR 6 n 6 THR 6 T VAL 7 n 7 VAL 7 T ALA 8 n 8 ALA 8 T ALA 9 n 9 ALA 9 T TYR 10 n 10 TYR 10 T ASN 11 n 11 ASN 11 T LEU 12 n 12 LEU 12 T THR 13 n 13 THR 13 T TRP 14 n 14 TRP 14 T LYS 15 n 15 LYS 15 T SER 16 n 16 SER 16 T THR 17 n 17 THR 17 T ASN 18 n 18 ASN 18 T PHE 19 n 19 PHE 19 T LYS 20 n 20 LYS 20 T THR 21 n 21 THR 21 T ILE 22 n 22 ILE 22 T LEU 23 n 23 LEU 23 T GLU 24 n 24 GLU 24 T TRP 25 n 25 TRP 25 T GLU 26 n 26 GLU 26 T PRO 27 n 27 PRO 27 T LYS 28 n 28 LYS 28 T PRO 29 n 29 PRO 29 T VAL 30 n 30 VAL 30 T ASN 31 n 31 ASN 31 T GLN 32 n 32 GLN 32 T VAL 33 n 33 VAL 33 T TYR 34 n 34 TYR 34 T THR 35 n 35 THR 35 T VAL 36 n 36 VAL 36 T GLN 37 n 37 GLN 37 T ILE 38 n 38 ILE 38 T SER 39 n 39 SER 39 T THR 40 n 40 THR 40 T LYS 41 n 41 LYS 41 T SER 42 n 42 SER 42 T GLY 43 n 43 GLY 43 T ASP 44 n 44 ASP 44 T TRP 45 n 45 TRP 45 T LYS 46 n 46 LYS 46 T SER 47 n 47 SER 47 T LYS 48 n 48 LYS 48 T CYS 49 n 49 CYS 49 T PHE 50 n 50 PHE 50 T TYR 51 n 51 TYR 51 T THR 52 n 52 THR 52 T THR 53 n 53 THR 53 T ASP 54 n 54 ASP 54 T THR 55 n 55 THR 55 T GLU 56 n 56 GLU 56 T CYS 57 n 57 CYS 57 T ASP 58 n 58 ASP 58 T LEU 59 n 59 LEU 59 T THR 60 n 60 THR 60 T ASP 61 n 61 ASP 61 T GLU 62 n 62 GLU 62 T ILE 63 n 63 ILE 63 T VAL 64 n 64 VAL 64 T LYS 65 n 65 LYS 65 T ASP 66 n 66 ASP 66 T VAL 67 n 67 VAL 67 T LYS 68 n 68 LYS 68 T GLN 69 n 69 GLN 69 T THR 70 n 70 THR 70 T TYR 71 n 71 TYR 71 T LEU 72 n 72 LEU 72 T ALA 73 n 73 ALA 73 T ARG 74 n 74 ARG 74 T VAL 75 n 75 VAL 75 T PHE 76 n 76 PHE 76 T SER 77 n 77 SER 77 T TYR 78 n 78 TYR 78 T PRO 79 n 79 PRO 79 T ALA 80 n 80 ALA 80 T GLY 81 n 81 GLY 81 T ASN 82 n 82 ASN 82 T VAL 83 n 83 VAL 83 T GLU 84 n 84 GLU 84 T SER 85 n 85 SER 85 T THR 86 n 86 THR 86 T GLY 87 n 87 GLY 87 T SER 88 n 88 SER 88 T ALA 89 n 89 ALA 89 T GLY 90 n 90 GLY 90 T GLU 91 n 91 GLU 91 T PRO 92 n 92 PRO 92 T LEU 93 n 93 LEU 93 T TYR 94 n 94 TYR 94 T GLU 95 n 95 GLU 95 T ASN 96 n 96 ASN 96 T SER 97 n 97 SER 97 T PRO 98 n 98 PRO 98 T GLU 99 n 99 GLU 99 T PHE 100 n 100 PHE 100 T THR 101 n 101 THR 101 T PRO 102 n 102 PRO 102 T TYR 103 n 103 TYR 103 T LEU 104 n 104 LEU 104 T GLU 105 n 105 GLU 105 T THR 106 n 106 THR 106 T ASN 107 n 107 ASN 107 T LEU 108 n 108 LEU 108 T GLY 109 n 109 GLY 109 T GLN 110 n 110 GLN 110 T PRO 111 n 111 PRO 111 T THR 112 n 112 THR 112 T ILE 113 n 113 ILE 113 T GLN 114 n 114 GLN 114 T SER 115 n 115 SER 115 T PHE 116 n 116 PHE 116 T GLU 117 n 117 GLU 117 T GLN 118 n 118 GLN 118 T VAL 119 n 119 VAL 119 T GLY 120 n 120 GLY 120 T THR 121 n 121 THR 121 T LYS 122 n 122 LYS 122 T VAL 123 n 123 VAL 123 T ASN 124 n 124 ASN 124 T VAL 125 n 125 VAL 125 T THR 126 n 126 THR 126 T VAL 127 n 127 VAL 127 T GLU 128 n 128 GLU 128 T ASP 129 n 129 ASP 129 T GLU 130 n 130 GLU 130 T ARG 131 n 131 ARG 131 T THR 132 n 132 THR 132 T LEU 133 n 133 LEU 133 T VAL 134 n 134 VAL 134 T ARG 135 n 135 ARG 135 T ARG 136 n 136 ARG 136 T ASN 137 n 137 ASN 137 T ASN 138 n 138 ASN 138 T THR 139 n 139 THR 139 T PHE 140 n 140 PHE 140 T LEU 141 n 141 LEU 141 T SER 142 n 142 SER 142 T LEU 143 n 143 LEU 143 T ARG 144 n 144 ARG 144 T ASP 145 n 145 ASP 145 T VAL 146 n 146 VAL 146 T PHE 147 n 147 PHE 147 T GLY 148 n 148 GLY 148 T LYS 149 n 149 LYS 149 T ASP 150 n 150 ASP 150 T LEU 151 n 151 LEU 151 T ILE 152 n 152 ILE 152 T TYR 153 n 153 TYR 153 T THR 154 n 154 THR 154 T LEU 155 n 155 LEU 155 T TYR 156 n 156 TYR 156 T TYR 157 n 157 TYR 157 T TRP 158 n 158 TRP 158 T LYS 159 n 159 LYS 159 T SER 160 n 160 SER 160 T SER 161 n 161 SER 161 T SER 162 n 162 SER 162 T SER 163 n 163 SER 163 T GLY 164 n 164 GLY 164 T LYS 165 n 165 LYS 165 T LYS 166 n 166 LYS 166 T THR 167 n 167 THR 167 T ALA 168 n 168 ALA 168 T LYS 169 n 169 LYS 169 T THR 170 n 170 THR 170 T ASN 171 n 171 ASN 171 T THR 172 n 172 THR 172 T ASN 173 n 173 ASN 173 T GLU 174 n 174 GLU 174 T PHE 175 n 175 PHE 175 T LEU 176 n 176 LEU 176 T ILE 177 n 177 ILE 177 T ASP 178 n 178 ASP 178 T VAL 179 n 179 VAL 179 T ASP 180 n 180 ASP 180 T LYS 181 n 181 LYS 181 T GLY 182 n 182 GLY 182 T GLU 183 n 183 GLU 183 T ASN 184 n 184 ASN 184 T TYR 185 n 185 TYR 185 T CYS 186 n 186 CYS 186 T PHE 187 n 187 PHE 187 T SER 188 n 188 SER 188 T VAL 189 n 189 VAL 189 T GLN 190 n 190 GLN 190 T ALA 191 n 191 ALA 191 T VAL 192 n 192 VAL 192 T ILE 193 n 193 ILE 193 T PRO 194 n 194 PRO 194 T SER 195 n 195 SER 195 T ARG 196 n 196 ARG 196 T THR 197 n 197 THR 197 T VAL 198 n 198 VAL 198 T ASN 199 n 199 ASN 199 T ARG 200 n 200 ARG 200 T LYS 201 n 201 LYS 201 T SER 202 n 202 SER 202 T THR 203 n 203 THR 203 T ASP 204 n 204 ASP 204 T SER 205 n 205 SER 205 T PRO 206 n 206 PRO 206 T VAL 207 n 207 VAL 207 T GLU 208 n 208 GLU 208 T CYS 209 n 209 CYS 209 T MET 210 n 210 MET 210 T ASP 48 n 1 ASP 48 L GLN 49 n 2 GLN 49 L CYS 50 n 3 CYS 50 L ALA 51 n 4 ALA 51 L SER 52 n 5 SER 52 L SER 53 n 6 SER 53 L PRO 54 n 7 PRO 54 L CYS 55 n 8 CYS 55 L GLN 56 n 9 GLN 56 L ASN 57 n 10 ASN 57 L GLY 58 n 11 GLY 58 L GLY 59 n 12 GLY 59 L SER 60 n 13 SER 60 L CYS 61 n 14 CYS 61 L LYS 62 n 15 LYS 62 L ASP 63 n 16 ASP 63 L GLN 64 n 17 GLN 64 L LEU 65 n 18 LEU 65 L GLN 66 n 19 GLN 66 L SER 67 n 20 SER 67 L TYR 68 n 21 TYR 68 L ILE 69 n 22 ILE 69 L CYS 70 n 23 CYS 70 L PHE 71 n 24 PHE 71 L CYS 72 n 25 CYS 72 L LEU 73 n 26 LEU 73 L PRO 74 n 27 PRO 74 L ALA 75 n 28 ALA 75 L PHE 76 n 29 PHE 76 L GLU 77 n 30 GLU 77 L GLY 78 n 31 GLY 78 L ARG 79 n 32 ARG 79 L ASN 80 n 33 ASN 80 L CYS 81 n 34 CYS 81 L GLU 82 n 35 GLU 82 L THR 83 n 36 THR 83 L HIS 84 n 37 HIS 84 L LYS 85 n 38 LYS 85 L ASP 86 n 39 ASP 86 L ASP 87 n 40 ASP 87 L GLN 88 n 41 GLN 88 L LEU 89 n 42 LEU 89 L ILE 90 n 43 ILE 90 L CYS 91 n 44 CYS 91 L VAL 92 n 45 VAL 92 L ASN 93 n 46 ASN 93 L GLU 94 n 47 GLU 94 L ASN 95 n 48 ASN 95 L GLY 96 n 49 GLY 96 L GLY 97 n 50 GLY 97 L CYS 98 n 51 CYS 98 L GLU 99 n 52 GLU 99 L GLN 100 n 53 GLN 100 L TYR 101 n 54 TYR 101 L CYS 102 n 55 CYS 102 L SER 103 n 56 SER 103 L ASP 104 n 57 ASP 104 L HIS 105 n 58 HIS 105 L THR 106 n 59 THR 106 L GLY 107 n 60 GLY 107 L THR 108 n 61 THR 108 L LYS 109 n 62 LYS 109 L ARG 110 n 63 ARG 110 L SER 111 n 64 SER 111 L CYS 112 n 65 CYS 112 L ARG 113 n 66 ARG 113 L CYS 114 n 67 CYS 114 L HIS 115 n 68 HIS 115 L GLU 116 n 69 GLU 116 L GLY 117 n 70 GLY 117 L TYR 118 n 71 TYR 118 L SER 119 n 72 SER 119 L LEU 120 n 73 LEU 120 L LEU 121 n 74 LEU 121 L ALA 122 n 75 ALA 122 L ASP 123 n 76 ASP 123 L GLY 124 n 77 GLY 124 L VAL 125 n 78 VAL 125 L SER 126 n 79 SER 126 L CYS 127 n 80 CYS 127 L THR 128 n 81 THR 128 L PRO 129 n 82 PRO 129 L THR 130 n 83 THR 130 L VAL 131 n 84 VAL 131 L GLU 132 n 85 GLU 132 L TYR 133 n 86 TYR 133 L PRO 134 n 87 PRO 134 L CYS 135 n 88 CYS 135 L GLY 136 n 89 GLY 136 L LYS 137 n 90 LYS 137 L ILE 138 n 91 ILE 138 L PRO 139 n 92 PRO 139 L ILE 140 n 93 ILE 140 L LEU 141 n 94 LEU 141 L GLU 142 n 95 GLU 142 L ILE 16 n 1 ILE 16 H VAL 17 n 2 VAL 17 H GLY 18 n 3 GLY 18 H GLY 19 n 4 GLY 19 H LYS 20 n 5 LYS 20 H VAL 21 n 6 VAL 21 H CYS 22 n 7 CYS 22 H PRO 23 n 8 PRO 23 H LYS 24 n 9 LYS 24 H GLY 25 n 10 GLY 25 H GLU 26 n 11 GLU 26 H CYS 27 n 12 CYS 27 H PRO 28 n 13 PRO 28 H TRP 29 n 14 TRP 29 H GLN 30 n 15 GLN 30 H VAL 31 n 16 VAL 31 H LEU 32 n 17 LEU 32 H LEU 33 n 18 LEU 33 H LEU 34 n 19 LEU 34 H VAL 35 n 20 VAL 35 H ASN 37 n 21 ASN 37 H GLY 38 n 22 GLY 38 H ALA 39 n 23 ALA 39 H GLN 40 n 24 GLN 40 H LEU 41 n 25 LEU 41 H CYS 42 n 26 CYS 42 H GLY 43 n 27 GLY 43 H GLY 44 n 28 GLY 44 H THR 45 n 29 THR 45 H LEU 46 n 30 LEU 46 H ILE 47 n 31 ILE 47 H ASN 48 n 32 ASN 48 H THR 49 n 33 THR 49 H ILE 50 n 34 ILE 50 H TRP 51 n 35 TRP 51 H VAL 52 n 36 VAL 52 H VAL 53 n 37 VAL 53 H SER 54 n 38 SER 54 H ALA 55 n 39 ALA 55 H ALA 56 n 40 ALA 56 H HIS 57 n 41 HIS 57 H CYS 58 n 42 CYS 58 H PHE 59 n 43 PHE 59 H ASP 60 n 44 ASP 60 H LYS 60 n 45 A LYS 60 H ILE 60 n 46 B ILE 60 H LYS 60 n 47 C LYS 60 H ASN 60 n 48 D ASN 60 H TRP 61 n 49 TRP 61 H ARG 62 n 50 ARG 62 H ASN 63 n 51 ASN 63 H LEU 64 n 52 LEU 64 H ILE 65 n 53 ILE 65 H ALA 66 n 54 ALA 66 H VAL 67 n 55 VAL 67 H LEU 68 n 56 LEU 68 H GLY 69 n 57 GLY 69 H GLU 70 n 58 GLU 70 H HIS 71 n 59 HIS 71 H ASP 72 n 60 ASP 72 H LEU 73 n 61 LEU 73 H SER 74 n 62 SER 74 H GLU 75 n 63 GLU 75 H HIS 76 n 64 HIS 76 H ASP 77 n 65 ASP 77 H GLY 78 n 66 GLY 78 H ASP 79 n 67 ASP 79 H GLU 80 n 68 GLU 80 H GLN 81 n 69 GLN 81 H SER 82 n 70 SER 82 H ARG 83 n 71 ARG 83 H ARG 84 n 72 ARG 84 H VAL 85 n 73 VAL 85 H ALA 86 n 74 ALA 86 H GLN 87 n 75 GLN 87 H VAL 88 n 76 VAL 88 H ILE 89 n 77 ILE 89 H ILE 90 n 78 ILE 90 H PRO 91 n 79 PRO 91 H SER 92 n 80 SER 92 H THR 93 n 81 THR 93 H TYR 94 n 82 TYR 94 H VAL 95 n 83 VAL 95 H PRO 96 n 84 PRO 96 H GLY 97 n 85 GLY 97 H THR 98 n 86 THR 98 H THR 99 n 87 THR 99 H ASN 100 n 88 ASN 100 H HIS 101 n 89 HIS 101 H ASP 102 n 90 ASP 102 H ILE 103 n 91 ILE 103 H ALA 104 n 92 ALA 104 H LEU 105 n 93 LEU 105 H LEU 106 n 94 LEU 106 H ARG 107 n 95 ARG 107 H LEU 108 n 96 LEU 108 H HIS 109 n 97 HIS 109 H GLN 110 n 98 GLN 110 H PRO 111 n 99 PRO 111 H VAL 112 n 100 VAL 112 H VAL 113 n 101 VAL 113 H LEU 114 n 102 LEU 114 H THR 115 n 103 THR 115 H ASP 116 n 104 ASP 116 H HIS 117 n 105 HIS 117 H VAL 118 n 106 VAL 118 H VAL 119 n 107 VAL 119 H PRO 120 n 108 PRO 120 H LEU 121 n 109 LEU 121 H CYS 122 n 110 CYS 122 H LEU 123 n 111 LEU 123 H PRO 124 n 112 PRO 124 H GLU 125 n 113 GLU 125 H ARG 126 n 114 ARG 126 H THR 127 n 115 THR 127 H PHE 128 n 116 PHE 128 H SER 129 n 117 SER 129 H GLU 129 n 118 A GLU 129 H ARG 129 n 119 B ARG 129 H THR 129 n 120 C THR 129 H LEU 129 n 121 D LEU 129 H ALA 129 n 122 E ALA 129 H PHE 129 n 123 F PHE 129 H VAL 129 n 124 G VAL 129 H ARG 134 n 125 ARG 134 H PHE 135 n 126 PHE 135 H SER 136 n 127 SER 136 H LEU 137 n 128 LEU 137 H VAL 138 n 129 VAL 138 H SER 139 n 130 SER 139 H GLY 140 n 131 GLY 140 H TRP 141 n 132 TRP 141 H GLY 142 n 133 GLY 142 H GLN 143 n 134 GLN 143 H LEU 144 n 135 LEU 144 H LEU 145 n 136 LEU 145 H ASP 146 n 137 ASP 146 H ARG 147 n 138 ARG 147 H GLY 149 n 139 GLY 149 H ALA 150 n 140 ALA 150 H THR 151 n 141 THR 151 H ALA 152 n 142 ALA 152 H LEU 153 n 143 LEU 153 H GLU 154 n 144 GLU 154 H LEU 155 n 145 LEU 155 H MET 156 n 146 MET 156 H VAL 157 n 147 VAL 157 H LEU 158 n 148 LEU 158 H ASN 159 n 149 ASN 159 H VAL 160 n 150 VAL 160 H PRO 161 n 151 PRO 161 H ARG 162 n 152 ARG 162 H LEU 163 n 153 LEU 163 H MET 164 n 154 MET 164 H THR 165 n 155 THR 165 H GLN 166 n 156 GLN 166 H ASP 167 n 157 ASP 167 H CYS 168 n 158 CYS 168 H LEU 169 n 159 LEU 169 H GLN 170 n 160 GLN 170 H GLN 170 n 161 A GLN 170 H SER 170 n 162 B SER 170 H ARG 170 n 163 C ARG 170 H LYS 170 n 164 D LYS 170 H VAL 170 n 165 E VAL 170 H GLY 170 n 166 F GLY 170 H ASP 170 n 167 G ASP 170 H SER 170 n 168 H SER 170 H PRO 170 n 169 I PRO 170 H ASN 175 n 170 ASN 175 H ILE 176 n 171 ILE 176 H THR 177 n 172 THR 177 H GLU 178 n 173 GLU 178 H TYR 179 n 174 TYR 179 H MET 180 n 175 MET 180 H PHE 181 n 176 PHE 181 H CYS 182 n 177 CYS 182 H ALA 183 n 178 ALA 183 H GLY 184 n 179 A GLY 184 H TYR 184 n 180 TYR 184 H SER 185 n 181 SER 185 H ASP 186 n 182 ASP 186 H GLY 187 n 183 GLY 187 H SER 188 n 184 A SER 188 H LYS 188 n 185 LYS 188 H ASP 189 n 186 ASP 189 H SER 190 n 187 SER 190 H CYS 191 n 188 CYS 191 H LYS 192 n 189 LYS 192 H GLY 193 n 190 GLY 193 H ASP 194 n 191 ASP 194 H SER 195 n 192 SER 195 H GLY 196 n 193 GLY 196 H GLY 197 n 194 GLY 197 H PRO 198 n 195 PRO 198 H HIS 199 n 196 HIS 199 H ALA 200 n 197 ALA 200 H THR 201 n 198 THR 201 H HIS 202 n 199 HIS 202 H TYR 203 n 200 TYR 203 H ARG 204 n 201 ARG 204 H GLY 205 n 202 GLY 205 H THR 206 n 203 THR 206 H TRP 207 n 204 TRP 207 H TYR 208 n 205 TYR 208 H LEU 209 n 206 LEU 209 H THR 210 n 207 THR 210 H GLY 211 n 208 GLY 211 H ILE 212 n 209 ILE 212 H VAL 213 n 210 VAL 213 H SER 214 n 211 SER 214 H TRP 215 n 212 TRP 215 H GLY 216 n 213 GLY 216 H GLN 217 n 214 GLN 217 H GLY 219 n 215 GLY 219 H CYS 220 n 216 CYS 220 H ALA 221 n 217 A ALA 221 H THR 221 n 218 THR 221 H VAL 222 n 219 VAL 222 H GLY 223 n 220 GLY 223 H HIS 224 n 221 HIS 224 H PHE 225 n 222 PHE 225 H GLY 226 n 223 GLY 226 H VAL 227 n 224 VAL 227 H TYR 228 n 225 TYR 228 H THR 229 n 226 THR 229 H ARG 230 n 227 ARG 230 H VAL 231 n 228 VAL 231 H SER 232 n 229 SER 232 H GLN 233 n 230 GLN 233 H TYR 234 n 231 TYR 234 H ILE 235 n 232 ILE 235 H GLU 236 n 233 GLU 236 H TRP 237 n 234 TRP 237 H LEU 238 n 235 LEU 238 H GLN 239 n 236 GLN 239 H LYS 240 n 237 LYS 240 H LEU 241 n 238 LEU 241 H MET 242 n 239 MET 242 H ARG 243 n 240 ARG 243 H SER 244 n 241 SER 244 H GLU 245 n 242 GLU 245 H PRO 246 n 243 PRO 246 H ARG 247 n 244 ARG 247 H PRO 248 n 245 PRO 248 H GLY 249 n 246 GLY 249 H VAL 250 n 247 VAL 250 H LEU 251 n 248 LEU 251 H LEU 252 n 249 LEU 252 H ARG 253 n 250 ARG 253 H ALA 254 n 251 ALA 254 H PRO 255 n 252 PRO 255 H PHE 256 n 253 PHE 256 H PRO 257 n 254 PRO 257 H author_and_software_defined_assembly PISA 3 trimeric 6900 -19 25300 H GLU 70 C OE1 GLU 58 1_555 H CA 376 H CA CA 1_555 H ASP 72 C O ASP 60 1_555 82.2 H GLU 70 C OE1 GLU 58 1_555 H CA 376 H CA CA 1_555 H GLU 75 C O GLU 63 1_555 133.5 H ASP 72 C O ASP 60 1_555 H CA 376 H CA CA 1_555 H GLU 75 C O GLU 63 1_555 54.1 H GLU 70 C OE1 GLU 58 1_555 H CA 376 H CA CA 1_555 H GLU 80 C OE2 GLU 68 1_555 114.2 H ASP 72 C O ASP 60 1_555 H CA 376 H CA CA 1_555 H GLU 80 C OE2 GLU 68 1_555 158.1 H GLU 75 C O GLU 63 1_555 H CA 376 H CA CA 1_555 H GLU 80 C OE2 GLU 68 1_555 112.3 H GLU 70 C OE1 GLU 58 1_555 H CA 376 H CA CA 1_555 H HOH 418 K O HOH 1_555 89.5 H ASP 72 C O ASP 60 1_555 H CA 376 H CA CA 1_555 H HOH 418 K O HOH 1_555 71.8 H GLU 75 C O GLU 63 1_555 H CA 376 H CA CA 1_555 H HOH 418 K O HOH 1_555 90.9 H GLU 80 C OE2 GLU 68 1_555 H CA 376 H CA CA 1_555 H HOH 418 K O HOH 1_555 93.0 L SER 52 GLYCOSYLATION SITE B SER 5 SER L SER 60 GLYCOSYLATION SITE B SER 13 SER H ASN 175 GLYCOSYLATION SITE C ASN 170 ASN 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 T O THR 17 A O THR 17 T N LYS 20 A N LYS 20 T N LEU 23 A N LEU 23 T O CYS 57 A O CYS 57 T O THR 52 A O THR 52 T N TYR 34 A N TYR 34 T N SER 39 A N SER 39 T O LEU 72 A O LEU 72 T N SER 77 A N SER 77 T O LEU 93 A O LEU 93 T O GLU 117 A O GLU 117 T N ASN 124 A N ASN 124 T N VAL 123 A N VAL 123 T O ILE 177 A O ILE 177 T N ARG 136 A N ARG 136 T O THR 139 A O THR 139 T O ALA 168 A O ALA 168 T N LEU 155 A N LEU 155 T O TYR 156 A O TYR 156 T N SER 188 A N SER 188 L O GLU 77 B O GLU 30 L N THR 83 B N THR 36 L O HIS 105 B O HIS 58 L N THR 108 B N THR 61 L O SER 119 B O SER 72 L N THR 128 B N THR 81 H O LYS 20 C O LYS 5 H N VAL 157 C N VAL 147 H N LEU 163 C N LEU 153 H O CYS 182 C O CYS 177 H N ALA 183 C N ALA 178 H O GLY 226 C O GLY 223 H N THR 229 C N THR 226 H O ILE 212 C O ILE 209 H O GLY 211 C O GLY 208 H N HIS 199 C N HIS 196 H O ALA 200 C O ALA 197 H N LEU 137 C N LEU 128 H N GLY 140 C N GLY 131 H O MET 156 C O MET 146 H N LEU 252 C N LEU 249 H O VAL 88 C O VAL 76 H O ILE 89 C O ILE 77 H N LEU 105 C N LEU 93 H N LEU 106 C N LEU 94 H O VAL 52 C O VAL 36 H O VAL 53 C O VAL 37 H N THR 45 C N THR 29 H O GLY 44 C O GLY 28 H N VAL 31 C N VAL 16 H N LEU 34 C N LEU 19 H O ILE 65 C O ILE 53 H N LEU 68 C N LEU 56 H O GLN 81 C O GLN 69 1 H H OG O2 SER 0Z6 195 1 2.11 1 -17.86 2.70 111.00 93.14 H H H N CA C HIS HIS HIS 199 199 199 N 1 T THR 4 -154.87 -25.60 1 T ASN 5 -158.30 -51.50 1 T PHE 19 69.94 -12.12 1 T CYS 49 37.98 60.27 1 T TYR 51 28.64 55.75 1 T ASP 66 -170.18 70.95 1 T VAL 67 -56.87 2.11 1 T GLU 84 -153.49 70.45 1 T GLN 114 -51.00 -70.77 1 T SER 115 -162.69 103.83 1 T ASP 129 -69.13 95.82 1 T VAL 134 -63.79 79.48 1 T ASN 138 69.37 -25.76 1 T VAL 146 -74.34 -70.78 1 T ILE 152 -115.36 -164.80 1 T SER 160 -51.23 107.47 1 T SER 161 77.46 -18.29 1 T SER 162 43.10 -172.09 1 T SER 163 -173.14 -24.09 1 T THR 172 -67.01 -101.44 1 T ASN 173 179.99 12.22 1 T LEU 176 -161.73 70.32 1 T ASP 180 -65.83 -118.62 1 T GLU 183 -11.07 112.50 1 T GLN 190 -161.31 117.61 1 T VAL 198 -150.11 -80.42 1 T SER 202 -94.44 -141.90 1 T ASP 204 -59.89 107.41 1 T CYS 209 -92.53 -135.45 1 L GLN 49 170.80 -50.00 1 L CYS 50 -63.60 10.56 1 L ALA 51 -50.67 -72.44 1 L SER 52 -55.79 -1.14 1 L CYS 55 -64.71 98.60 1 L ASN 57 32.74 48.73 1 L SER 60 -55.95 -155.51 1 L CYS 61 -175.11 90.85 1 L SER 67 176.32 173.09 1 L CYS 81 50.32 15.75 1 L LYS 85 -48.67 -14.88 1 L ASP 86 -83.32 -85.17 1 L ASP 87 -32.68 72.86 1 L GLN 88 -167.19 12.40 1 L ASN 93 -55.65 -85.69 1 L GLN 100 -127.28 -97.45 1 L GLU 116 -30.87 -17.53 1 L LEU 121 -49.32 175.39 1 L TYR 133 -109.35 76.87 1 H LYS 24 -34.45 118.11 1 H CYS 27 -140.31 44.38 1 H ASN 37 63.78 -0.62 1 H CYS 42 -171.62 -163.42 B 1 H ILE 60 -12.23 106.48 1 H TRP 61 -65.88 34.75 1 H HIS 71 -159.35 -48.83 1 H SER 74 -66.01 -70.57 1 H ASP 77 -61.63 -177.99 1 H PRO 96 -35.69 129.92 C 1 H THR 129 -103.64 -67.30 1 H ARG 134 -28.14 -61.13 1 H ASP 146 -68.66 -102.06 1 H ARG 147 -62.62 8.27 1 H ASN 175 -48.17 154.48 1 H GLU 178 -75.22 21.08 1 H ASP 186 -97.81 34.80 A 1 H SER 188 -43.31 -87.92 1 H ASP 189 178.67 168.02 1 H SER 195 -36.96 139.14 1 H SER 214 -124.33 -80.18 1 H GLN 217 -58.03 -77.85 1 H ARG 230 -67.93 78.19 1 H VAL 231 -38.03 -27.98 1 H PRO 246 -44.01 163.31 1 H PRO 248 -37.54 -84.08 PROTEIN_REP.PARAM PROTEIN.TOP GLA_DPN.par CARBOHYDRATE.PARAM WATER_REP.PARAM ION.PARAM 44.2 41.89 0.00 6.41 -22.38 0.00 -19.50 0.299 0.013 0.221 2.90 53.94 570 17231 3.3 94.3 RANDOM 275465.89 0.00 1 RESTRAINED THROUGHOUT 0.0 0.0 MOLECULAR REPLACEMENT PDB ENTRY 1dan Engh & Huber FLAT MODEL 47.46 0.344 0.50 0.35 5.00 0.61 0.56 2.90 53.94 127 4559 70 0 4362 0.007 1.5 24.6 0.99 0.387 0.043 0.337 3.08 80 2520 6 3.1 86.4 -0.6 2.9 99 1J9C 18285 0 0 0.119 1 12.9 7.7 99.9 0.369 2.90 3.00 1 7.7 100 data reduction DENZO data scaling SCALEPACK phasing AMoRE refinement CNS 0.9 Crystal Structure of tissue factor-factor VIIa complex 1 N N 2 N N 3 N N 4 N N 5 N N 6 N N 7 N N 8 N N 9 N N 9 N N 9 N N T LEU 59 A LEU 59 HELX_P T VAL 64 A VAL 64 1 1 6 T LYS 65 A LYS 65 HELX_P T VAL 67 A VAL 67 5 2 3 T THR 101 A THR 101 HELX_P T THR 106 A THR 106 1 3 6 T LEU 143 A LEU 143 HELX_P T PHE 147 A PHE 147 1 4 5 L GLN 49 B GLN 2 HELX_P L SER 53 B SER 6 5 5 5 L GLU 94 B GLU 47 HELX_P L CYS 98 B CYS 51 5 6 5 H ALA 55 C ALA 39 HELX_P H ASP 60 C ASP 44 5 7 6 H GLU 125 C GLU 113 HELX_P H THR 129 C THR 120 1 8 8 C H LEU 129 C LEU 121 HELX_P H VAL 129 C VAL 124 5 9 4 D G H MET 164 C MET 154 HELX_P H SER 170 C SER 162 1 10 9 B H TYR 234 C TYR 231 HELX_P H SER 244 C SER 241 1 11 11 disulf 2.043 T CYS 49 A SG CYS 49 1_555 T CYS 57 A SG CYS 57 1_555 disulf 2.034 T CYS 186 A SG CYS 186 1_555 T CYS 209 A SG CYS 209 1_555 disulf 2.037 L CYS 50 B SG CYS 3 1_555 L CYS 61 B SG CYS 14 1_555 disulf 2.029 L CYS 55 B SG CYS 8 1_555 L CYS 70 B SG CYS 23 1_555 disulf 2.031 L CYS 72 B SG CYS 25 1_555 L CYS 81 B SG CYS 34 1_555 disulf 2.037 L CYS 91 B SG CYS 44 1_555 L CYS 102 B SG CYS 55 1_555 disulf 2.033 L CYS 98 B SG CYS 51 1_555 L CYS 112 B SG CYS 65 1_555 disulf 2.024 L CYS 114 B SG CYS 67 1_555 L CYS 127 B SG CYS 80 1_555 disulf 2.033 L CYS 135 B SG CYS 88 1_555 H CYS 122 C SG CYS 110 1_555 disulf 2.033 H CYS 22 C SG CYS 7 1_555 H CYS 27 C SG CYS 12 1_555 disulf 2.019 H CYS 42 C SG CYS 26 1_555 H CYS 58 C SG CYS 42 1_555 disulf 2.021 H CYS 168 C SG CYS 158 1_555 H CYS 182 C SG CYS 177 1_555 disulf 2.024 H CYS 191 C SG CYS 188 1_555 H CYS 220 C SG CYS 216 1_555 covale 1.393 one O-Glycosylation L SER 52 B OG SER 5 1_555 L GLC 352 D C1 GLC 1_555 covale 1.399 one L SER 60 B OG SER 13 1_555 L FUL 360 E C1 FUL 1_555 covale 1.489 one H 0Z6 1 F C3 0Z6 1_555 H HIS 57 C NE2 HIS 41 1_555 covale 1.355 none H 0Z6 1 F C2 0Z6 1_555 H SER 195 C OG SER 192 1_555 covale 1.455 one N-Glycosylation H ASN 175 C ND2 ASN 170 1_555 H NAG 375 G C1 NAG 1_555 metalc 2.577 H GLU 70 C OE1 GLU 58 1_555 H CA 376 H CA CA 1_555 metalc 2.795 H ASP 72 C O ASP 60 1_555 H CA 376 H CA CA 1_555 metalc 3.055 H GLU 75 C O GLU 63 1_555 H CA 376 H CA CA 1_555 metalc 2.531 H GLU 80 C OE2 GLU 68 1_555 H CA 376 H CA CA 1_555 metalc 2.826 H CA 376 H CA CA 1_555 H HOH 418 K O HOH 1_555 HYDROLASE/HYDROLASE INHIBITOR mobile loop, BLOOD CLOTTING, Hydrolase-hydrolase inhibitor complex T GLU 26 A GLU 26 1 T PRO 27 A PRO 27 0.18 H PHE 256 C PHE 253 1 H PRO 257 C PRO 254 -0.16 TF_HUMAN UNP 1 33 P13726 SGTTNTVAAYNLTWKSTNFKTILEWEPKPVNQVYTVQISTKSGDWKSKCFYTTDTECDLTDEIVKDVKQTYLARVFSYPA GNVESTGSAGEPLYENSPEFTPYLETNLGQPTIQSFEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYWKS SSSGKKTAKTNTNEFLIDVDKGENYCFSVQAVIPSRTVNRKSTDSPVECM FA7_HUMAN UNP 2 108 P08709 DQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSC TPTVEYPCGKIPILE FA7_HUMAN UNP 3 213 P08709 IVGGKVCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCFDKIKNWRNLIAVLGEHDLSEHDGDEQSRRVAQVIIPS TYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGATALELMVLNVPRLMTQDCLQ QSRKVGDSPNITEYMFCAGYSDGSKDSCKGDSGGPHATHYRGTWYLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLMR SEPRPGVLLRAPFP 33 242 1J9C 1 210 P13726 T 1 1 210 108 202 1J9C 48 142 P08709 L 2 1 95 213 466 1J9C 16 257 P08709 H 3 1 254 3 4 3 2 3 2 2 2 8 8 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel T TYR 10 A TYR 10 T THR 17 A THR 17 T LYS 20 A LYS 20 T GLU 26 A GLU 26 T GLU 56 A GLU 56 T ASP 58 A ASP 58 T LYS 46 A LYS 46 T THR 52 A THR 52 T GLN 32 A GLN 32 T THR 40 A THR 40 T TYR 71 A TYR 71 T PRO 79 A PRO 79 T LEU 93 A LEU 93 T ASN 96 A ASN 96 T GLU 117 A GLU 117 T GLN 118 A GLN 118 T LYS 122 A LYS 122 T ASN 124 A ASN 124 T ILE 177 A ILE 177 T ASP 178 A ASP 178 T ARG 131 A ARG 131 T ARG 136 A ARG 136 T THR 139 A THR 139 T SER 142 A SER 142 T LYS 166 A LYS 166 T ALA 168 A ALA 168 T ILE 152 A ILE 152 T TYR 157 A TYR 157 T SER 188 A SER 188 T VAL 192 A VAL 192 L PHE 76 B PHE 29 L GLU 77 B GLU 30 L THR 83 B THR 36 L HIS 84 B HIS 37 L TYR 101 B TYR 54 L HIS 105 B HIS 58 L THR 108 B THR 61 L ARG 113 B ARG 66 L TYR 118 B TYR 71 L LEU 120 B LEU 73 L CYS 127 B CYS 80 L PRO 129 B PRO 82 H LYS 20 C LYS 5 H VAL 21 C VAL 6 H MET 156 C MET 146 H LEU 163 C LEU 153 H MET 180 C MET 175 H ALA 183 C ALA 178 H GLY 226 C GLY 223 H ARG 230 C ARG 227 H THR 206 C THR 203 H GLY 216 C GLY 213 H PRO 198 C PRO 195 H TYR 203 C TYR 200 H PHE 135 C PHE 126 H GLY 140 C GLY 131 H MET 156 C MET 146 H LEU 163 C LEU 153 H LEU 251 C LEU 248 H LEU 252 C LEU 249 H GLN 81 C GLN 69 H ILE 89 C ILE 77 H ALA 104 C ALA 92 H LEU 108 C LEU 96 H TRP 51 C TRP 35 H SER 54 C SER 38 H ALA 39 C ALA 23 H ASN 48 C ASN 32 H GLN 30 C GLN 15 H VAL 35 C VAL 20 H LEU 64 C LEU 52 H LEU 68 C LEU 56 H GLN 81 C GLN 69 H ILE 89 C ILE 77 4 P 1 21 1