1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Miura, T. Klaus, W. Ross, A. Guentert, P. Senn, H. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking NE J.Biomol.NMR JBNME9 0800 0925-2738 22 89 92 10.1023/A:1013807519703 11885984 The NMR structure of the class I human ubiquitin-conjugating enzyme 2b 2002 10.2210/pdb1jas/pdb pdb_00001jas 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 SINGLE WAVELENGTH M 1 1.0 17328.283 UBIQUITIN-CONJUGATING ENZYME E2-17 KDA 6.3.2.19 1 man polymer no no MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPN VYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQSWNDS MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPN VYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQSWNDS A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia sample 9606 Homo sapiens 562 Escherichia coli database_2 pdbx_nmr_software pdbx_struct_assembly pdbx_struct_oper_list repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 2003-09-09 1 1 2008-04-27 1 2 2011-07-13 1 3 2022-02-23 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_nmr_software.name RCSB Y RCSB 2001-05-31 REL REL target function 100 20 2D NOESY 3D_15N-separated_NOESY 3D_13C-separated_NOESY 4D_13C-separated_NOESY 6.7 ambient 308 K CANDID: automated NOE cross peak assignment torsion angle dynamics UL-13C, UL-15N; 75 mM ammonium acetate (deut.), 100 mM ammonium sulphate, pH 6.7 90% H2O/10% D2O UL-13C, 75 mM ammonium acetate (deut.), 100 mM ammonium sulphate, pH 6.7 100% D2O various collection XwinNMR 2.6 F. Delaglio processing NMRPipe 1.7 P. Guentert et al structure solution DYANA 1.65 P. Guentert et al refinement DYANA 1.65 600 Bruker DMX MET 1 n 1 MET 1 A SER 2 n 2 SER 2 A THR 3 n 3 THR 3 A PRO 4 n 4 PRO 4 A ALA 5 n 5 ALA 5 A ARG 6 n 6 ARG 6 A ARG 7 n 7 ARG 7 A ARG 8 n 8 ARG 8 A LEU 9 n 9 LEU 9 A MET 10 n 10 MET 10 A ARG 11 n 11 ARG 11 A ASP 12 n 12 ASP 12 A PHE 13 n 13 PHE 13 A LYS 14 n 14 LYS 14 A ARG 15 n 15 ARG 15 A LEU 16 n 16 LEU 16 A GLN 17 n 17 GLN 17 A GLU 18 n 18 GLU 18 A ASP 19 n 19 ASP 19 A PRO 20 n 20 PRO 20 A PRO 21 n 21 PRO 21 A VAL 22 n 22 VAL 22 A GLY 23 n 23 GLY 23 A VAL 24 n 24 VAL 24 A SER 25 n 25 SER 25 A GLY 26 n 26 GLY 26 A ALA 27 n 27 ALA 27 A PRO 28 n 28 PRO 28 A SER 29 n 29 SER 29 A GLU 30 n 30 GLU 30 A ASN 31 n 31 ASN 31 A ASN 32 n 32 ASN 32 A ILE 33 n 33 ILE 33 A MET 34 n 34 MET 34 A GLN 35 n 35 GLN 35 A TRP 36 n 36 TRP 36 A ASN 37 n 37 ASN 37 A ALA 38 n 38 ALA 38 A VAL 39 n 39 VAL 39 A ILE 40 n 40 ILE 40 A PHE 41 n 41 PHE 41 A GLY 42 n 42 GLY 42 A PRO 43 n 43 PRO 43 A GLU 44 n 44 GLU 44 A GLY 45 n 45 GLY 45 A THR 46 n 46 THR 46 A PRO 47 n 47 PRO 47 A PHE 48 n 48 PHE 48 A GLU 49 n 49 GLU 49 A ASP 50 n 50 ASP 50 A GLY 51 n 51 GLY 51 A THR 52 n 52 THR 52 A PHE 53 n 53 PHE 53 A LYS 54 n 54 LYS 54 A LEU 55 n 55 LEU 55 A VAL 56 n 56 VAL 56 A ILE 57 n 57 ILE 57 A GLU 58 n 58 GLU 58 A PHE 59 n 59 PHE 59 A SER 60 n 60 SER 60 A GLU 61 n 61 GLU 61 A GLU 62 n 62 GLU 62 A TYR 63 n 63 TYR 63 A PRO 64 n 64 PRO 64 A ASN 65 n 65 ASN 65 A LYS 66 n 66 LYS 66 A PRO 67 n 67 PRO 67 A PRO 68 n 68 PRO 68 A THR 69 n 69 THR 69 A VAL 70 n 70 VAL 70 A ARG 71 n 71 ARG 71 A PHE 72 n 72 PHE 72 A LEU 73 n 73 LEU 73 A SER 74 n 74 SER 74 A LYS 75 n 75 LYS 75 A MET 76 n 76 MET 76 A PHE 77 n 77 PHE 77 A HIS 78 n 78 HIS 78 A PRO 79 n 79 PRO 79 A ASN 80 n 80 ASN 80 A VAL 81 n 81 VAL 81 A TYR 82 n 82 TYR 82 A ALA 83 n 83 ALA 83 A ASP 84 n 84 ASP 84 A GLY 85 n 85 GLY 85 A SER 86 n 86 SER 86 A ILE 87 n 87 ILE 87 A CYS 88 n 88 CYS 88 A LEU 89 n 89 LEU 89 A ASP 90 n 90 ASP 90 A ILE 91 n 91 ILE 91 A LEU 92 n 92 LEU 92 A GLN 93 n 93 GLN 93 A ASN 94 n 94 ASN 94 A ARG 95 n 95 ARG 95 A TRP 96 n 96 TRP 96 A SER 97 n 97 SER 97 A PRO 98 n 98 PRO 98 A THR 99 n 99 THR 99 A TYR 100 n 100 TYR 100 A ASP 101 n 101 ASP 101 A VAL 102 n 102 VAL 102 A SER 103 n 103 SER 103 A SER 104 n 104 SER 104 A ILE 105 n 105 ILE 105 A LEU 106 n 106 LEU 106 A THR 107 n 107 THR 107 A SER 108 n 108 SER 108 A ILE 109 n 109 ILE 109 A GLN 110 n 110 GLN 110 A SER 111 n 111 SER 111 A LEU 112 n 112 LEU 112 A LEU 113 n 113 LEU 113 A ASP 114 n 114 ASP 114 A GLU 115 n 115 GLU 115 A PRO 116 n 116 PRO 116 A ASN 117 n 117 ASN 117 A PRO 118 n 118 PRO 118 A ASN 119 n 119 ASN 119 A SER 120 n 120 SER 120 A PRO 121 n 121 PRO 121 A ALA 122 n 122 ALA 122 A ASN 123 n 123 ASN 123 A SER 124 n 124 SER 124 A GLN 125 n 125 GLN 125 A ALA 126 n 126 ALA 126 A ALA 127 n 127 ALA 127 A GLN 128 n 128 GLN 128 A LEU 129 n 129 LEU 129 A TYR 130 n 130 TYR 130 A GLN 131 n 131 GLN 131 A GLU 132 n 132 GLU 132 A ASN 133 n 133 ASN 133 A LYS 134 n 134 LYS 134 A ARG 135 n 135 ARG 135 A GLU 136 n 136 GLU 136 A TYR 137 n 137 TYR 137 A GLU 138 n 138 GLU 138 A LYS 139 n 139 LYS 139 A ARG 140 n 140 ARG 140 A VAL 141 n 141 VAL 141 A SER 142 n 142 SER 142 A ALA 143 n 143 ALA 143 A ILE 144 n 144 ILE 144 A VAL 145 n 145 VAL 145 A GLU 146 n 146 GLU 146 A GLN 147 n 147 GLN 147 A SER 148 n 148 SER 148 A TRP 149 n 149 TRP 149 A ASN 150 n 150 ASN 150 A ASP 151 n 151 ASP 151 A SER 152 n 152 SER 152 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O ALA 27 A O ALA 27 A N ASN 37 A N ASN 37 A O ILE 40 A O ILE 40 A N PHE 53 A N PHE 53 A N GLU 58 A N GLU 58 A O THR 69 A O THR 69 1 A A OD1 HG ASP SER 101 103 1.54 6 A A OD2 HG ASP SER 101 103 1.59 8 A A OD2 HH ASP TYR 12 63 1.59 11 A A O HG GLU SER 138 142 1.60 12 A A HG1 OE2 THR GLU 3 61 1.59 13 A A OD2 HH ASP TYR 12 63 1.60 17 A A O HG VAL SER 145 148 1.59 6 A A ILE CYS 87 88 149.52 17 A A PRO THR 68 69 146.79 1 A ARG 8 0.087 SIDE CHAIN 1 A TYR 63 0.073 SIDE CHAIN 1 A ARG 140 0.077 SIDE CHAIN 2 A ARG 7 0.086 SIDE CHAIN 3 A ARG 71 0.101 SIDE CHAIN 5 A ARG 6 0.091 SIDE CHAIN 5 A ARG 71 0.109 SIDE CHAIN 6 A TYR 130 0.074 SIDE CHAIN 7 A TYR 100 0.081 SIDE CHAIN 7 A ARG 140 0.078 SIDE CHAIN 8 A ARG 135 0.106 SIDE CHAIN 9 A ARG 6 0.091 SIDE CHAIN 9 A ARG 8 0.084 SIDE CHAIN 11 A ARG 140 0.088 SIDE CHAIN 12 A ARG 71 0.087 SIDE CHAIN 12 A ARG 135 0.094 SIDE CHAIN 15 A ARG 15 0.076 SIDE CHAIN 15 A TYR 63 0.080 SIDE CHAIN 15 A TYR 82 0.071 SIDE CHAIN 16 A ARG 11 0.092 SIDE CHAIN 16 A TYR 137 0.078 SIDE CHAIN 17 A ARG 140 0.124 SIDE CHAIN 18 A TYR 82 0.071 SIDE CHAIN 18 A ARG 140 0.083 SIDE CHAIN 19 A ARG 7 0.076 SIDE CHAIN 20 A TYR 130 0.074 SIDE CHAIN 6 -9.62 1.60 110.90 101.28 A A A CG1 CB CG2 VAL VAL VAL 56 56 56 N 6 -3.53 0.50 120.30 116.77 A A A NE CZ NH2 ARG ARG ARG 135 135 135 N 9 -3.75 0.60 121.00 117.25 A A A CB CG CD1 TYR TYR TYR 63 63 63 N 11 -3.92 0.60 121.00 117.08 A A A CB CG CD1 TYR TYR TYR 63 63 63 N 14 3.82 0.60 121.00 124.82 A A A CB CG CD2 TYR TYR TYR 63 63 63 N 14 -5.94 0.60 121.00 115.06 A A A CB CG CD1 TYR TYR TYR 63 63 63 N 19 -3.17 0.50 120.30 117.13 A A A NE CZ NH2 ARG ARG ARG 7 7 7 N 20 -3.35 0.50 120.30 116.95 A A A NE CZ NH2 ARG ARG ARG 11 11 11 N 20 3.12 0.50 120.30 123.42 A A A NE CZ NH1 ARG ARG ARG 95 95 95 N 1 A SER 29 -55.36 170.59 1 A GLN 93 -122.55 -145.30 1 A GLU 132 -81.79 -90.09 1 A ASN 133 -101.60 68.33 2 A SER 2 -152.63 -68.81 2 A GLU 62 -74.13 39.37 2 A GLN 93 -123.68 -103.04 2 A THR 99 -145.85 -40.07 2 A GLU 132 -82.58 -89.94 2 A ASN 133 -107.22 68.84 3 A PRO 79 -68.76 1.38 3 A GLN 93 -103.09 -148.98 3 A PRO 98 -71.71 38.85 3 A PRO 121 -89.55 48.27 3 A GLU 132 -77.23 -74.04 3 A ASN 133 -111.38 72.65 4 A GLN 93 -96.13 -154.80 4 A THR 99 -143.33 -27.09 4 A GLU 132 -96.53 -89.27 5 A SER 2 -151.87 29.85 5 A GLU 62 -80.77 31.72 5 A GLN 93 -111.78 -156.09 5 A GLU 132 -78.39 -72.66 5 A ASN 133 -111.28 68.94 6 A GLN 93 -114.32 -120.23 6 A THR 99 -136.94 -34.29 6 A GLU 132 -96.49 -83.72 6 A ASN 133 -110.05 77.03 7 A GLU 62 -106.70 62.10 7 A PRO 64 -78.35 22.48 7 A GLN 93 -117.97 -106.85 7 A PRO 98 -69.94 78.56 7 A THR 99 -152.30 -45.89 7 A GLU 132 -71.01 -73.57 7 A ASN 133 -109.76 68.02 8 A GLN 93 -107.02 -137.37 8 A GLU 132 -88.48 -84.80 9 A GLN 93 -113.17 -143.55 9 A THR 99 -138.08 -30.86 9 A GLU 132 -77.53 -79.61 9 A ASN 133 -110.55 68.78 9 A TRP 149 -73.88 23.13 10 A GLN 93 -102.59 -146.93 10 A GLU 132 -82.84 -96.46 11 A GLN 93 -114.95 -150.54 11 A THR 99 -128.39 -59.92 11 A GLU 132 -81.63 -77.31 11 A ASN 133 -109.62 78.40 12 A GLN 93 -109.21 -137.85 12 A THR 99 -139.06 -44.25 12 A GLU 132 -89.66 -96.28 12 A TRP 149 -68.92 13.64 13 A GLN 93 -100.38 -147.05 13 A PRO 98 -65.17 26.62 13 A GLU 132 -76.48 -76.02 13 A ASN 133 -109.58 68.75 14 A GLN 93 -106.59 -123.00 14 A GLU 132 -70.23 -75.81 14 A ASN 133 -109.88 67.84 15 A GLU 62 -83.27 32.04 15 A GLN 93 -112.60 -93.75 15 A ARG 95 -75.10 23.70 15 A GLU 132 -84.00 -79.19 15 A ASN 133 -110.27 69.29 16 A ILE 33 -141.06 -19.46 16 A GLU 62 -74.81 32.67 16 A GLN 93 -96.34 -99.46 16 A THR 99 -152.25 -42.64 16 A GLU 132 -67.68 -84.76 16 A ASN 133 -108.20 68.12 17 A GLN 93 -108.55 -153.16 17 A PRO 98 -78.65 41.47 17 A GLU 132 -99.35 -88.69 18 A SER 2 -162.36 -81.39 18 A ILE 33 -142.11 -8.80 18 A GLN 93 -118.73 -89.52 18 A PRO 118 -68.97 5.07 18 A GLU 132 -79.25 -82.57 18 A ASP 151 -67.40 99.70 19 A GLN 93 -89.29 -108.34 19 A PRO 98 -69.51 4.67 19 A GLU 132 -70.59 -73.64 19 A ASN 133 -110.45 70.09 20 A ASN 94 -69.50 4.67 20 A GLU 132 -82.35 -92.14 20 A ASN 133 -106.36 67.81 HsUbc2b 1 N N A THR 3 A THR 3 HELX_P A ASP 19 A ASP 19 1 1 17 A LEU 89 A LEU 89 HELX_P A GLN 93 A GLN 93 5 2 5 A ASP 101 A ASP 101 HELX_P A GLU 115 A GLU 115 1 3 15 A ASN 123 A ASN 123 HELX_P A GLU 132 A GLU 132 1 4 10 A ASN 133 A ASN 133 HELX_P A GLN 147 A GLN 147 1 5 15 A SER 148 A SER 148 HELX_P A ASP 151 A ASP 151 5 6 4 LIGASE ubiquitin conjugation, ubiquitin conjugating enzyme, LIGASE A TYR 63 A TYR 63 1 A PRO 64 A PRO 64 -12.57 A TYR 63 A TYR 63 2 A PRO 64 A PRO 64 -14.18 A TYR 63 A TYR 63 3 A PRO 64 A PRO 64 2.62 A TYR 63 A TYR 63 4 A PRO 64 A PRO 64 -3.75 A TYR 63 A TYR 63 5 A PRO 64 A PRO 64 -11.75 A TYR 63 A TYR 63 6 A PRO 64 A PRO 64 -12.59 A TYR 63 A TYR 63 7 A PRO 64 A PRO 64 -7.17 A TYR 63 A TYR 63 8 A PRO 64 A PRO 64 0.06 A TYR 63 A TYR 63 9 A PRO 64 A PRO 64 1.87 A TYR 63 A TYR 63 10 A PRO 64 A PRO 64 -10.55 A TYR 63 A TYR 63 11 A PRO 64 A PRO 64 -6.39 A TYR 63 A TYR 63 12 A PRO 64 A PRO 64 1.32 A TYR 63 A TYR 63 13 A PRO 64 A PRO 64 -13.91 A TYR 63 A TYR 63 14 A PRO 64 A PRO 64 -3.61 A TYR 63 A TYR 63 15 A PRO 64 A PRO 64 -7.36 A TYR 63 A TYR 63 16 A PRO 64 A PRO 64 -5.47 A TYR 63 A TYR 63 17 A PRO 64 A PRO 64 -2.02 A TYR 63 A TYR 63 18 A PRO 64 A PRO 64 -4.55 A TYR 63 A TYR 63 19 A PRO 64 A PRO 64 1.16 A TYR 63 A TYR 63 20 A PRO 64 A PRO 64 -8.01 UBE2B_HUMAN UNP 1 1 P63146 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPN VYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQSWNDS 1 152 1JAS 1 152 P63146 A 1 1 152 4 anti-parallel anti-parallel anti-parallel A VAL 24 A VAL 24 A PRO 28 A PRO 28 A GLN 35 A GLN 35 A PHE 41 A PHE 41 A THR 52 A THR 52 A GLU 58 A GLU 58 A THR 69 A THR 69 A PHE 72 A PHE 72 1 P 1