0.016029 0.000000 0.003567 0.000000 0.030010 0.000000 0.000000 0.000000 0.014233 0.00000 0.00000 0.00000 Liu, J. Dai, J. Lu, M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 102.55 90.00 62.388 33.322 71.979 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N O N 95 N H N 96 N H N 97 N N N 98 S C N 99 N C N 100 N O N 101 S C N 102 N C N 103 N C N 104 N C N 105 N O N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N N N 120 S C N 121 N C N 122 N O N 123 N C N 124 N C N 125 N C N 126 N C N 127 N O N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N N N 142 S C N 143 N C N 144 N O N 145 N C N 146 N C N 147 N C N 148 N C N 149 N N N 150 N O N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N N N 167 S C N 168 N C N 169 N O N 170 N C N 171 N C N 172 N S N 173 N C N 174 N O N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N N N 187 S C N 188 N C N 189 N O N 190 N C N 191 N O N 192 N O N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N N N 201 S C N 202 N C N 203 N O N 204 R C N 205 N O N 206 N C N 207 N O N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N N N 218 S C N 219 N C N 220 N O N 221 N C Y 222 N C Y 223 N C Y 224 N C Y 225 N C Y 226 N C Y 227 N C N 228 N O N 229 N O N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N N N 242 S C N 243 N C N 244 N O N 245 N C N 246 N C N 247 N C N 248 N O N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N ZN N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N doub N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N doub N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N doub N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N doub N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N doub N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing Y 216 N doub Y 217 N sing Y 218 N sing N 219 N sing Y 220 N doub N 221 N sing Y 222 N doub N 223 N sing Y 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N doub N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing US Biochemistry BICHAW 0033 0006-2960 42 5657 5664 10.1021/bi026828a 12741822 Zinc-Mediated Helix Capping in A Triple-Helical Protein 2003 10.2210/pdb1jcc/pdb pdb_00001jcc 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 95 1 CCD 2000-04-20 ADSC QUANTUM 4 GRAPHITE SINGLE WAVELENGTH M x-ray 1 1.1000 1.0 X26C NSLS 1.1000 1.1000 SYNCHROTRON NSLS BEAMLINE X26C 5905.234 MAJOR OUTER MEMBRANE LIPOPROTEIN V13A,L16A,V20A,L23A,V27A,M30A,V34A 3 man polymer 65.409 ZINC ION 3 syn non-polymer 18.015 water 234 nat water MUREIN-LIPOPROTEIN no no SSNAKIDQLSSDAQTANAKADQASNDANAARSDAQAAKDDAARANQRLDNMATKYR SSNAKIDQLSSDAQTANAKADQASNDANAARSDAQAAKDDAARANQRLDNMATKYR A,B,C polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Escherichia Escherichia sample 562 Escherichia coli 562 Escherichia coli PLASMID 1 2.06 40.33 VAPOR DIFFUSION, HANGING DROP 5.6 Sodium acetate, zinc acetate, PEG 8000, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 293K 293 software database_2 pdbx_struct_conn_angle struct_conn struct_ref_seq_dif struct_site chem_comp_atom chem_comp_bond pdbx_initial_refinement_model repository Initial release Version format compliance Version format compliance Refinement description Database references Derived calculations Data collection Refinement description 1 0 2003-06-17 1 1 2008-04-27 1 2 2011-07-13 1 3 2017-10-04 1 4 2021-10-27 1 5 2023-08-16 _software.name _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_symmetry _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id 1EQ7 is the wild type protein structure 1JCB has the following mutations: M30A,V34A 1JCD has the following mutations: I6A,L9A,V13A,L16A,V20A,L23A,V27A,M30A,V34A,L48A,M51A RCSB Y RCSB 2001-06-08 REL REL ZN ZINC ION HOH water 1EQ7 PDB ENTRY 1EQ7 PDB experimental model ZN 81 2 ZN ZN 81 A ZN 82 2 ZN ZN 82 B ZN 83 2 ZN ZN 83 C HOH 107 3 HOH HOH 107 A HOH 111 3 HOH HOH 111 A HOH 112 3 HOH HOH 112 A HOH 113 3 HOH HOH 113 A HOH 114 3 HOH HOH 114 A HOH 119 3 HOH HOH 119 A HOH 120 3 HOH HOH 120 A HOH 127 3 HOH HOH 127 A HOH 128 3 HOH HOH 128 A HOH 131 3 HOH HOH 131 A HOH 132 3 HOH HOH 132 A HOH 134 3 HOH HOH 134 A HOH 137 3 HOH HOH 137 A HOH 140 3 HOH HOH 140 A HOH 143 3 HOH HOH 143 A HOH 145 3 HOH HOH 145 A HOH 146 3 HOH HOH 146 A HOH 149 3 HOH HOH 149 A HOH 151 3 HOH HOH 151 A HOH 153 3 HOH HOH 153 A HOH 155 3 HOH HOH 155 A HOH 159 3 HOH HOH 159 A HOH 161 3 HOH HOH 161 A HOH 163 3 HOH HOH 163 A HOH 171 3 HOH HOH 171 A HOH 172 3 HOH HOH 172 A HOH 173 3 HOH HOH 173 A HOH 174 3 HOH HOH 174 A HOH 177 3 HOH HOH 177 A HOH 179 3 HOH HOH 179 A HOH 180 3 HOH HOH 180 A HOH 182 3 HOH HOH 182 A HOH 184 3 HOH HOH 184 A HOH 186 3 HOH HOH 186 A HOH 189 3 HOH HOH 189 A HOH 191 3 HOH HOH 191 A HOH 198 3 HOH HOH 198 A HOH 199 3 HOH HOH 199 A HOH 200 3 HOH HOH 200 A HOH 201 3 HOH HOH 201 A HOH 202 3 HOH HOH 202 A HOH 204 3 HOH HOH 204 A HOH 211 3 HOH HOH 211 A HOH 213 3 HOH HOH 213 A HOH 214 3 HOH HOH 214 A HOH 215 3 HOH HOH 215 A HOH 216 3 HOH HOH 216 A HOH 217 3 HOH HOH 217 A HOH 218 3 HOH HOH 218 A HOH 219 3 HOH HOH 219 A HOH 220 3 HOH HOH 220 A HOH 221 3 HOH HOH 221 A HOH 224 3 HOH HOH 224 A HOH 225 3 HOH HOH 225 A HOH 226 3 HOH HOH 226 A HOH 227 3 HOH HOH 227 A HOH 228 3 HOH HOH 228 A HOH 229 3 HOH HOH 229 A HOH 231 3 HOH HOH 231 A HOH 232 3 HOH HOH 232 A HOH 238 3 HOH HOH 238 A HOH 246 3 HOH HOH 246 A HOH 253 3 HOH HOH 253 A HOH 258 3 HOH HOH 258 A HOH 259 3 HOH HOH 259 A HOH 270 3 HOH HOH 270 A HOH 272 3 HOH HOH 272 A HOH 274 3 HOH HOH 274 A HOH 285 3 HOH HOH 285 A HOH 287 3 HOH HOH 287 A HOH 288 3 HOH HOH 288 A HOH 292 3 HOH HOH 292 A HOH 297 3 HOH HOH 297 A HOH 303 3 HOH HOH 303 A HOH 304 3 HOH HOH 304 A HOH 306 3 HOH HOH 306 A HOH 311 3 HOH HOH 311 A HOH 318 3 HOH HOH 318 A HOH 334 3 HOH HOH 334 A HOH 103 3 HOH HOH 103 B HOH 105 3 HOH HOH 105 B HOH 108 3 HOH HOH 108 B HOH 110 3 HOH HOH 110 B HOH 115 3 HOH HOH 115 B HOH 116 3 HOH HOH 116 B HOH 117 3 HOH HOH 117 B HOH 118 3 HOH HOH 118 B HOH 122 3 HOH HOH 122 B HOH 126 3 HOH HOH 126 B HOH 135 3 HOH HOH 135 B HOH 139 3 HOH HOH 139 B HOH 141 3 HOH HOH 141 B HOH 144 3 HOH HOH 144 B HOH 147 3 HOH HOH 147 B HOH 148 3 HOH HOH 148 B HOH 150 3 HOH HOH 150 B HOH 152 3 HOH HOH 152 B HOH 154 3 HOH HOH 154 B HOH 162 3 HOH HOH 162 B HOH 164 3 HOH HOH 164 B HOH 167 3 HOH HOH 167 B HOH 169 3 HOH HOH 169 B HOH 170 3 HOH HOH 170 B HOH 183 3 HOH HOH 183 B HOH 187 3 HOH HOH 187 B HOH 188 3 HOH HOH 188 B HOH 190 3 HOH HOH 190 B HOH 192 3 HOH HOH 192 B HOH 193 3 HOH HOH 193 B HOH 205 3 HOH HOH 205 B HOH 206 3 HOH HOH 206 B HOH 207 3 HOH HOH 207 B HOH 208 3 HOH HOH 208 B HOH 210 3 HOH HOH 210 B HOH 212 3 HOH HOH 212 B HOH 233 3 HOH HOH 233 B HOH 235 3 HOH HOH 235 B HOH 239 3 HOH HOH 239 B HOH 241 3 HOH HOH 241 B HOH 242 3 HOH HOH 242 B HOH 243 3 HOH HOH 243 B HOH 244 3 HOH HOH 244 B HOH 245 3 HOH HOH 245 B HOH 247 3 HOH HOH 247 B HOH 249 3 HOH HOH 249 B HOH 250 3 HOH HOH 250 B HOH 251 3 HOH HOH 251 B HOH 252 3 HOH HOH 252 B HOH 255 3 HOH HOH 255 B HOH 256 3 HOH HOH 256 B HOH 257 3 HOH HOH 257 B HOH 262 3 HOH HOH 262 B HOH 266 3 HOH HOH 266 B HOH 268 3 HOH HOH 268 B HOH 271 3 HOH HOH 271 B HOH 275 3 HOH HOH 275 B HOH 277 3 HOH HOH 277 B HOH 278 3 HOH HOH 278 B HOH 279 3 HOH HOH 279 B HOH 280 3 HOH HOH 280 B HOH 281 3 HOH HOH 281 B HOH 289 3 HOH HOH 289 B HOH 290 3 HOH HOH 290 B HOH 291 3 HOH HOH 291 B HOH 298 3 HOH HOH 298 B HOH 299 3 HOH HOH 299 B HOH 301 3 HOH HOH 301 B HOH 302 3 HOH HOH 302 B HOH 305 3 HOH HOH 305 B HOH 310 3 HOH HOH 310 B HOH 313 3 HOH HOH 313 B HOH 314 3 HOH HOH 314 B HOH 316 3 HOH HOH 316 B HOH 317 3 HOH HOH 317 B HOH 323 3 HOH HOH 323 B HOH 324 3 HOH HOH 324 B HOH 325 3 HOH HOH 325 B HOH 326 3 HOH HOH 326 B HOH 328 3 HOH HOH 328 B HOH 330 3 HOH HOH 330 B HOH 333 3 HOH HOH 333 B HOH 101 3 HOH HOH 101 C HOH 102 3 HOH HOH 102 C HOH 104 3 HOH HOH 104 C HOH 106 3 HOH HOH 106 C HOH 109 3 HOH HOH 109 C HOH 121 3 HOH HOH 121 C HOH 123 3 HOH HOH 123 C HOH 124 3 HOH HOH 124 C HOH 125 3 HOH HOH 125 C HOH 129 3 HOH HOH 129 C HOH 130 3 HOH HOH 130 C HOH 133 3 HOH HOH 133 C HOH 136 3 HOH HOH 136 C HOH 138 3 HOH HOH 138 C HOH 142 3 HOH HOH 142 C HOH 156 3 HOH HOH 156 C HOH 157 3 HOH HOH 157 C HOH 158 3 HOH HOH 158 C HOH 160 3 HOH HOH 160 C HOH 165 3 HOH HOH 165 C HOH 166 3 HOH HOH 166 C HOH 168 3 HOH HOH 168 C HOH 175 3 HOH HOH 175 C HOH 176 3 HOH HOH 176 C HOH 178 3 HOH HOH 178 C HOH 181 3 HOH HOH 181 C HOH 185 3 HOH HOH 185 C HOH 194 3 HOH HOH 194 C HOH 195 3 HOH HOH 195 C HOH 196 3 HOH HOH 196 C HOH 197 3 HOH HOH 197 C HOH 203 3 HOH HOH 203 C HOH 209 3 HOH HOH 209 C HOH 222 3 HOH HOH 222 C HOH 223 3 HOH HOH 223 C HOH 230 3 HOH HOH 230 C HOH 234 3 HOH HOH 234 C HOH 236 3 HOH HOH 236 C HOH 237 3 HOH HOH 237 C HOH 240 3 HOH HOH 240 C HOH 248 3 HOH HOH 248 C HOH 254 3 HOH HOH 254 C HOH 260 3 HOH HOH 260 C HOH 261 3 HOH HOH 261 C HOH 263 3 HOH HOH 263 C HOH 264 3 HOH HOH 264 C HOH 265 3 HOH HOH 265 C HOH 267 3 HOH HOH 267 C HOH 269 3 HOH HOH 269 C HOH 273 3 HOH HOH 273 C HOH 276 3 HOH HOH 276 C HOH 282 3 HOH HOH 282 C HOH 283 3 HOH HOH 283 C HOH 284 3 HOH HOH 284 C HOH 286 3 HOH HOH 286 C HOH 293 3 HOH HOH 293 C HOH 294 3 HOH HOH 294 C HOH 295 3 HOH HOH 295 C HOH 296 3 HOH HOH 296 C HOH 300 3 HOH HOH 300 C HOH 307 3 HOH HOH 307 C HOH 308 3 HOH HOH 308 C HOH 309 3 HOH HOH 309 C HOH 312 3 HOH HOH 312 C HOH 315 3 HOH HOH 315 C HOH 319 3 HOH HOH 319 C HOH 320 3 HOH HOH 320 C HOH 321 3 HOH HOH 321 C HOH 322 3 HOH HOH 322 C HOH 327 3 HOH HOH 327 C HOH 329 3 HOH HOH 329 C HOH 331 3 HOH HOH 331 C HOH 332 3 HOH HOH 332 C SER 1 n 1 SER 1 A SER 2 n 2 SER 2 A ASN 3 n 3 ASN 3 A ALA 4 n 4 ALA 4 A LYS 5 n 5 LYS 5 A ILE 6 n 6 ILE 6 A ASP 7 n 7 ASP 7 A GLN 8 n 8 GLN 8 A LEU 9 n 9 LEU 9 A SER 10 n 10 SER 10 A SER 11 n 11 SER 11 A ASP 12 n 12 ASP 12 A ALA 13 n 13 ALA 13 A GLN 14 n 14 GLN 14 A THR 15 n 15 THR 15 A ALA 16 n 16 ALA 16 A ASN 17 n 17 ASN 17 A ALA 18 n 18 ALA 18 A LYS 19 n 19 LYS 19 A ALA 20 n 20 ALA 20 A ASP 21 n 21 ASP 21 A GLN 22 n 22 GLN 22 A ALA 23 n 23 ALA 23 A SER 24 n 24 SER 24 A ASN 25 n 25 ASN 25 A ASP 26 n 26 ASP 26 A ALA 27 n 27 ALA 27 A ASN 28 n 28 ASN 28 A ALA 29 n 29 ALA 29 A ALA 30 n 30 ALA 30 A ARG 31 n 31 ARG 31 A SER 32 n 32 SER 32 A ASP 33 n 33 ASP 33 A ALA 34 n 34 ALA 34 A GLN 35 n 35 GLN 35 A ALA 36 n 36 ALA 36 A ALA 37 n 37 ALA 37 A LYS 38 n 38 LYS 38 A ASP 39 n 39 ASP 39 A ASP 40 n 40 ASP 40 A ALA 41 n 41 ALA 41 A ALA 42 n 42 ALA 42 A ARG 43 n 43 ARG 43 A ALA 44 n 44 ALA 44 A ASN 45 n 45 ASN 45 A GLN 46 n 46 GLN 46 A ARG 47 n 47 ARG 47 A LEU 48 n 48 LEU 48 A ASP 49 n 49 ASP 49 A ASN 50 n 50 ASN 50 A MET 51 n 51 MET 51 A n 52 52 A n 53 53 A n 54 54 A n 55 55 A n 56 56 A SER 1 n 1 SER 1 B SER 2 n 2 SER 2 B ASN 3 n 3 ASN 3 B ALA 4 n 4 ALA 4 B LYS 5 n 5 LYS 5 B ILE 6 n 6 ILE 6 B ASP 7 n 7 ASP 7 B GLN 8 n 8 GLN 8 B LEU 9 n 9 LEU 9 B SER 10 n 10 SER 10 B SER 11 n 11 SER 11 B ASP 12 n 12 ASP 12 B ALA 13 n 13 ALA 13 B GLN 14 n 14 GLN 14 B THR 15 n 15 THR 15 B ALA 16 n 16 ALA 16 B ASN 17 n 17 ASN 17 B ALA 18 n 18 ALA 18 B LYS 19 n 19 LYS 19 B ALA 20 n 20 ALA 20 B ASP 21 n 21 ASP 21 B GLN 22 n 22 GLN 22 B ALA 23 n 23 ALA 23 B SER 24 n 24 SER 24 B ASN 25 n 25 ASN 25 B ASP 26 n 26 ASP 26 B ALA 27 n 27 ALA 27 B ASN 28 n 28 ASN 28 B ALA 29 n 29 ALA 29 B ALA 30 n 30 ALA 30 B ARG 31 n 31 ARG 31 B SER 32 n 32 SER 32 B ASP 33 n 33 ASP 33 B ALA 34 n 34 ALA 34 B GLN 35 n 35 GLN 35 B ALA 36 n 36 ALA 36 B ALA 37 n 37 ALA 37 B LYS 38 n 38 LYS 38 B ASP 39 n 39 ASP 39 B ASP 40 n 40 ASP 40 B ALA 41 n 41 ALA 41 B ALA 42 n 42 ALA 42 B ARG 43 n 43 ARG 43 B ALA 44 n 44 ALA 44 B ASN 45 n 45 ASN 45 B GLN 46 n 46 GLN 46 B ARG 47 n 47 ARG 47 B LEU 48 n 48 LEU 48 B ASP 49 n 49 ASP 49 B ASN 50 n 50 ASN 50 B MET 51 n 51 MET 51 B ALA 52 n 52 ALA 52 B n 53 53 B n 54 54 B n 55 55 B n 56 56 B SER 1 n 1 SER 1 C SER 2 n 2 SER 2 C ASN 3 n 3 ASN 3 C ALA 4 n 4 ALA 4 C LYS 5 n 5 LYS 5 C ILE 6 n 6 ILE 6 C ASP 7 n 7 ASP 7 C GLN 8 n 8 GLN 8 C LEU 9 n 9 LEU 9 C SER 10 n 10 SER 10 C SER 11 n 11 SER 11 C ASP 12 n 12 ASP 12 C ALA 13 n 13 ALA 13 C GLN 14 n 14 GLN 14 C THR 15 n 15 THR 15 C ALA 16 n 16 ALA 16 C ASN 17 n 17 ASN 17 C ALA 18 n 18 ALA 18 C LYS 19 n 19 LYS 19 C ALA 20 n 20 ALA 20 C ASP 21 n 21 ASP 21 C GLN 22 n 22 GLN 22 C ALA 23 n 23 ALA 23 C SER 24 n 24 SER 24 C ASN 25 n 25 ASN 25 C ASP 26 n 26 ASP 26 C ALA 27 n 27 ALA 27 C ASN 28 n 28 ASN 28 C ALA 29 n 29 ALA 29 C ALA 30 n 30 ALA 30 C ARG 31 n 31 ARG 31 C SER 32 n 32 SER 32 C ASP 33 n 33 ASP 33 C ALA 34 n 34 ALA 34 C GLN 35 n 35 GLN 35 C ALA 36 n 36 ALA 36 C ALA 37 n 37 ALA 37 C LYS 38 n 38 LYS 38 C ASP 39 n 39 ASP 39 C ASP 40 n 40 ASP 40 C ALA 41 n 41 ALA 41 C ALA 42 n 42 ALA 42 C ARG 43 n 43 ARG 43 C ALA 44 n 44 ALA 44 C ASN 45 n 45 ASN 45 C GLN 46 n 46 GLN 46 C ARG 47 n 47 ARG 47 C LEU 48 n 48 LEU 48 C ASP 49 n 49 ASP 49 C ASN 50 n 50 ASN 50 C MET 51 n 51 MET 51 C ALA 52 n 52 ALA 52 C THR 53 n 53 THR 53 C n 54 54 C n 55 55 C n 56 56 C author_and_software_defined_assembly PISA 3 trimeric 5650 -101 8700 A SER 1 A N SER 1 1_555 A ZN 81 D ZN ZN 1_555 A SER 1 A O SER 1 1_555 68.1 A SER 1 A N SER 1 1_555 A ZN 81 D ZN ZN 1_555 A ASP 7 A OD2 ASP 7 1_555 132.0 A SER 1 A O SER 1 1_555 A ZN 81 D ZN ZN 1_555 A ASP 7 A OD2 ASP 7 1_555 84.7 A SER 1 A N SER 1 1_555 A ZN 81 D ZN ZN 1_555 A HOH 334 G O HOH 1_555 86.5 A SER 1 A O SER 1 1_555 A ZN 81 D ZN ZN 1_555 A HOH 334 G O HOH 1_555 149.9 A ASP 7 A OD2 ASP 7 1_555 A ZN 81 D ZN ZN 1_555 A HOH 334 G O HOH 1_555 125.2 A SER 1 A N SER 1 1_555 A ZN 81 D ZN ZN 1_555 C ASP 26 C OD1 ASP 26 4_556 128.2 A SER 1 A O SER 1 1_555 A ZN 81 D ZN ZN 1_555 C ASP 26 C OD1 ASP 26 4_556 93.5 A ASP 7 A OD2 ASP 7 1_555 A ZN 81 D ZN ZN 1_555 C ASP 26 C OD1 ASP 26 4_556 90.7 A HOH 334 G O HOH 1_555 A ZN 81 D ZN ZN 1_555 C ASP 26 C OD1 ASP 26 4_556 89.9 A SER 1 A N SER 1 1_555 A ZN 81 D ZN ZN 1_555 C ASP 26 C OD2 ASP 26 4_556 78.0 A SER 1 A O SER 1 1_555 A ZN 81 D ZN ZN 1_555 C ASP 26 C OD2 ASP 26 4_556 80.1 A ASP 7 A OD2 ASP 7 1_555 A ZN 81 D ZN ZN 1_555 C ASP 26 C OD2 ASP 26 4_556 136.8 A HOH 334 G O HOH 1_555 A ZN 81 D ZN ZN 1_555 C ASP 26 C OD2 ASP 26 4_556 79.0 C ASP 26 C OD1 ASP 26 4_556 A ZN 81 D ZN ZN 1_555 C ASP 26 C OD2 ASP 26 4_556 50.7 A ASP 26 A OD2 ASP 26 4_546 C ZN 83 F ZN ZN 1_555 A ASP 26 A OD1 ASP 26 4_546 52.5 A ASP 26 A OD2 ASP 26 4_546 C ZN 83 F ZN ZN 1_555 C SER 1 C N SER 1 1_555 89.3 A ASP 26 A OD1 ASP 26 4_546 C ZN 83 F ZN ZN 1_555 C SER 1 C N SER 1 1_555 141.7 A ASP 26 A OD2 ASP 26 4_546 C ZN 83 F ZN ZN 1_555 C SER 1 C O SER 1 1_555 79.6 A ASP 26 A OD1 ASP 26 4_546 C ZN 83 F ZN ZN 1_555 C SER 1 C O SER 1 1_555 93.1 C SER 1 C N SER 1 1_555 C ZN 83 F ZN ZN 1_555 C SER 1 C O SER 1 1_555 75.1 A ASP 26 A OD2 ASP 26 4_546 C ZN 83 F ZN ZN 1_555 C ASP 7 C OD2 ASP 7 1_555 141.2 A ASP 26 A OD1 ASP 26 4_546 C ZN 83 F ZN ZN 1_555 C ASP 7 C OD2 ASP 7 1_555 89.9 C SER 1 C N SER 1 1_555 C ZN 83 F ZN ZN 1_555 C ASP 7 C OD2 ASP 7 1_555 126.8 C SER 1 C O SER 1 1_555 C ZN 83 F ZN ZN 1_555 C ASP 7 C OD2 ASP 7 1_555 95.3 A ASP 26 A OD2 ASP 26 4_546 C ZN 83 F ZN ZN 1_555 C HOH 194 I O HOH 1_555 85.6 A ASP 26 A OD1 ASP 26 4_546 C ZN 83 F ZN ZN 1_555 C HOH 194 I O HOH 1_555 89.3 C SER 1 C N SER 1 1_555 C ZN 83 F ZN ZN 1_555 C HOH 194 I O HOH 1_555 90.5 C SER 1 C O SER 1 1_555 C ZN 83 F ZN ZN 1_555 C HOH 194 I O HOH 1_555 159.4 C ASP 7 C OD2 ASP 7 1_555 C ZN 83 F ZN ZN 1_555 C HOH 194 I O HOH 1_555 105.2 B SER 1 B N SER 1 1_555 B ZN 82 E ZN ZN 1_555 B SER 1 B O SER 1 1_555 69.6 B SER 1 B N SER 1 1_555 B ZN 82 E ZN ZN 1_555 B ASP 7 B OD1 ASP 7 1_555 104.2 B SER 1 B O SER 1 1_555 B ZN 82 E ZN ZN 1_555 B ASP 7 B OD1 ASP 7 1_555 104.4 B SER 1 B N SER 1 1_555 B ZN 82 E ZN ZN 1_555 B ASP 7 B OD2 ASP 7 1_555 131.3 B SER 1 B O SER 1 1_555 B ZN 82 E ZN ZN 1_555 B ASP 7 B OD2 ASP 7 1_555 79.4 B ASP 7 B OD1 ASP 7 1_555 B ZN 82 E ZN ZN 1_555 B ASP 7 B OD2 ASP 7 1_555 48.3 B SER 1 B N SER 1 1_555 B ZN 82 E ZN ZN 1_555 B ASP 26 B OD1 ASP 26 2_656 93.1 B SER 1 B O SER 1 1_555 B ZN 82 E ZN ZN 1_555 B ASP 26 B OD1 ASP 26 2_656 82.2 B ASP 7 B OD1 ASP 7 1_555 B ZN 82 E ZN ZN 1_555 B ASP 26 B OD1 ASP 26 2_656 162.7 B ASP 7 B OD2 ASP 7 1_555 B ZN 82 E ZN ZN 1_555 B ASP 26 B OD1 ASP 26 2_656 119.4 B SER 1 B N SER 1 1_555 B ZN 82 E ZN ZN 1_555 B HOH 210 H O HOH 2_656 98.8 B SER 1 B O SER 1 1_555 B ZN 82 E ZN ZN 1_555 B HOH 210 H O HOH 2_656 160.4 B ASP 7 B OD1 ASP 7 1_555 B ZN 82 E ZN ZN 1_555 B HOH 210 H O HOH 2_656 93.6 B ASP 7 B OD2 ASP 7 1_555 B ZN 82 E ZN ZN 1_555 B HOH 210 H O HOH 2_656 119.1 B ASP 26 B OD1 ASP 26 2_656 B ZN 82 E ZN ZN 1_555 B HOH 210 H O HOH 2_656 82.8 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A CD GLN 14 A CD GLN 14 1 Y 1 A OE1 GLN 14 A OE1 GLN 14 1 Y 1 A NE2 GLN 14 A NE2 GLN 14 1 Y 1 A CD LYS 19 A CD LYS 19 1 Y 1 A CE LYS 19 A CE LYS 19 1 Y 1 A NZ LYS 19 A NZ LYS 19 1 Y 1 A CD GLN 46 A CD GLN 46 1 Y 1 A OE1 GLN 46 A OE1 GLN 46 1 Y 1 A NE2 GLN 46 A NE2 GLN 46 1 Y 1 A O MET 51 A O MET 51 1 Y 1 B CD GLN 14 B CD GLN 14 1 Y 1 B OE1 GLN 14 B OE1 GLN 14 1 Y 1 B NE2 GLN 14 B NE2 GLN 14 1 Y 1 B CD GLN 46 B CD GLN 46 1 Y 1 B OE1 GLN 46 B OE1 GLN 46 1 Y 1 B NE2 GLN 46 B NE2 GLN 46 1 Y 1 B O ALA 52 B O ALA 52 1 Y 1 C CD GLN 14 C CD GLN 14 1 Y 1 C OE1 GLN 14 C OE1 GLN 14 1 Y 1 C NE2 GLN 14 C NE2 GLN 14 1 Y 1 C CD GLN 22 C CD GLN 22 1 Y 1 C OE1 GLN 22 C OE1 GLN 22 1 Y 1 C NE2 GLN 22 C NE2 GLN 22 1 Y 1 C O THR 53 C O THR 53 1 Y 1 A ALA 52 A ALA 52 1 Y 1 A THR 53 A THR 53 1 Y 1 A LYS 54 A LYS 54 1 Y 1 A TYR 55 A TYR 55 1 Y 1 A ARG 56 A ARG 56 1 Y 1 B THR 53 B THR 53 1 Y 1 B LYS 54 B LYS 54 1 Y 1 B TYR 55 B TYR 55 1 Y 1 B ARG 56 B ARG 56 1 Y 1 C LYS 54 C LYS 54 1 Y 1 C TYR 55 C TYR 55 1 Y 1 C ARG 56 C ARG 56 1 Y 1 A ASN 50 -97.86 55.39 PROTEIN_REP.PARAM PROTEIN.TOP WATER_REP.PARAM WATER.TOP ION.PARAM ION.TOP 22.1 7.56 0.00 0.45 -1.56 0.00 -5.99 0.223 0.006 0.192 1.70 35.13 1594 15821 15821 10.1 97.6 RANDOM 1029074.03 0.00 1 RESTRAINED THROUGHOUT 0.0 0.0 MOLECULAR REPLACEMENT PDB ENTRY 1EQ7 Engh & Huber FLAT MODEL 73.90 0.408 0.22 0.19 5.00 0.21 0.18 1.70 35.13 234 1331 3 0 1094 0.006 0.9 15.5 0.68 1.17 1.50 1.62 2.00 2.55 2.00 3.67 2.50 0.299 0.019 0.25 1.81 252 2360 2612 6 9.6 98.3 21.9 1.7 50.0 1JCC 15821 15821 0.0 0.0 0.079 1 7.7 2.5 97.6 0.383 1.70 1.76 3.3 1605 2.5 97.6 data collection MADNESS data scaling SCALEPACK phasing AMoRE refinement CNS 1.0 data reduction MADNESS Crystal Structure of a Novel Alanine-Zipper Trimer at 1.7 A Resolution, V13A,L16A,V20A,L23A,V27A,M30A,V34A mutations 1 N N 1 N N 1 N N 2 N N 2 N N 2 N N 3 N N 3 N N 3 N N The biological assembly is a trimer. A ASN 3 A ASN 3 HELX_P A ASN 50 A ASN 50 1 1 48 B ASN 3 B ASN 3 HELX_P B MET 51 B MET 51 1 2 49 C ASN 3 C ASN 3 HELX_P C ASN 50 C ASN 50 1 3 48 metalc 2.724 A SER 1 A N SER 1 1_555 A ZN 81 D ZN ZN 1_555 metalc 2.444 A SER 1 A O SER 1 1_555 A ZN 81 D ZN ZN 1_555 metalc 2.410 A ASP 7 A OD2 ASP 7 1_555 A ZN 81 D ZN ZN 1_555 metalc 2.618 A ASP 26 A OD2 ASP 26 4_546 C ZN 83 F ZN ZN 1_555 metalc 2.323 A ASP 26 A OD1 ASP 26 4_546 C ZN 83 F ZN ZN 1_555 metalc 2.537 A ZN 81 D ZN ZN 1_555 A HOH 334 G O HOH 1_555 metalc 2.342 A ZN 81 D ZN ZN 1_555 C ASP 26 C OD1 ASP 26 4_556 metalc 2.738 A ZN 81 D ZN ZN 1_555 C ASP 26 C OD2 ASP 26 4_556 metalc 2.718 B SER 1 B N SER 1 1_555 B ZN 82 E ZN ZN 1_555 metalc 2.324 B SER 1 B O SER 1 1_555 B ZN 82 E ZN ZN 1_555 metalc 2.754 B ASP 7 B OD1 ASP 7 1_555 B ZN 82 E ZN ZN 1_555 metalc 2.618 B ASP 7 B OD2 ASP 7 1_555 B ZN 82 E ZN ZN 1_555 metalc 2.245 B ASP 26 B OD1 ASP 26 2_656 B ZN 82 E ZN ZN 1_555 metalc 2.682 B ZN 82 E ZN ZN 1_555 B HOH 210 H O HOH 2_656 metalc 2.413 C SER 1 C N SER 1 1_555 C ZN 83 F ZN ZN 1_555 metalc 2.325 C SER 1 C O SER 1 1_555 C ZN 83 F ZN ZN 1_555 metalc 2.243 C ASP 7 C OD2 ASP 7 1_555 C ZN 83 F ZN ZN 1_555 metalc 2.341 C ZN 83 F ZN ZN 1_555 C HOH 194 I O HOH 1_555 MEMBRANE PROTEIN LIPOPROTEIN, PROTEIN FOLDING, COILED COIL, HELIX CAPPING, ALANINE-ZIPPER, MEMBRANE PROTEIN LPP_ECOLI UNP 1 22 P69776 SSNAKIDQLSSDVQTLNAKVDQLSNDVNAMRSDVQAAKDDAARANQRLDNMATKYR 22 77 1JCC 1 56 P69776 A 1 1 56 22 77 1JCC 1 56 P69776 B 1 1 56 22 77 1JCC 1 56 P69776 C 1 1 56 1 VAL engineered mutation ALA 13 1JCC A P69776 UNP 34 13 1 LEU engineered mutation ALA 16 1JCC A P69776 UNP 37 16 1 VAL engineered mutation ALA 20 1JCC A P69776 UNP 41 20 1 LEU engineered mutation ALA 23 1JCC A P69776 UNP 44 23 1 VAL engineered mutation ALA 27 1JCC A P69776 UNP 48 27 1 MET engineered mutation ALA 30 1JCC A P69776 UNP 51 30 1 VAL engineered mutation ALA 34 1JCC A P69776 UNP 55 34 2 VAL engineered mutation ALA 13 1JCC B P69776 UNP 34 13 2 LEU engineered mutation ALA 16 1JCC B P69776 UNP 37 16 2 VAL engineered mutation ALA 20 1JCC B P69776 UNP 41 20 2 LEU engineered mutation ALA 23 1JCC B P69776 UNP 44 23 2 VAL engineered mutation ALA 27 1JCC B P69776 UNP 48 27 2 MET engineered mutation ALA 30 1JCC B P69776 UNP 51 30 2 VAL engineered mutation ALA 34 1JCC B P69776 UNP 55 34 3 VAL engineered mutation ALA 13 1JCC C P69776 UNP 34 13 3 LEU engineered mutation ALA 16 1JCC C P69776 UNP 37 16 3 VAL engineered mutation ALA 20 1JCC C P69776 UNP 41 20 3 LEU engineered mutation ALA 23 1JCC C P69776 UNP 44 23 3 VAL engineered mutation ALA 27 1JCC C P69776 UNP 48 27 3 MET engineered mutation ALA 30 1JCC C P69776 UNP 51 30 3 VAL engineered mutation ALA 34 1JCC C P69776 UNP 55 34 BINDING SITE FOR RESIDUE ZN A 81 A ZN 81 Software 4 BINDING SITE FOR RESIDUE ZN B 82 B ZN 82 Software 4 BINDING SITE FOR RESIDUE ZN C 83 C ZN 83 Software 4 A SER 1 A SER 1 4 1_555 A ASP 7 A ASP 7 4 1_555 A HOH 334 G HOH 4 1_555 C ASP 26 C ASP 26 4 4_556 B SER 1 B SER 1 4 1_555 B ASP 7 B ASP 7 4 1_555 B ASP 26 B ASP 26 4 2_656 B HOH 210 H HOH 4 2_656 A ASP 26 A ASP 26 4 4_546 C SER 1 C SER 1 4 1_555 C ASP 7 C ASP 7 4 1_555 C HOH 194 I HOH 4 1_555 5 C 1 2 1