0.033670
0.000000
0.000000
0.000000
0.016694
0.000000
0.000000
0.000000
0.015291
0.00000
0.00000
0.00000
Camara-Artigas, A.
Williams, J.C.
Allen, J.P.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
29.700
59.900
65.400
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C34 H32 Fe N4 O4
616.487
PROTOPORPHYRIN IX CONTAINING FE
HEME
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
C
N
138
N
C
N
139
N
C
N
140
N
C
Y
141
N
C
Y
142
N
C
Y
143
N
C
Y
144
N
C
N
145
N
C
N
146
N
C
N
147
N
C
N
148
N
C
N
149
N
O
N
150
N
O
N
151
N
C
N
152
N
C
N
153
N
C
N
154
N
C
N
155
N
C
N
156
N
C
N
157
N
C
Y
158
N
C
Y
159
N
C
Y
160
N
C
Y
161
N
C
N
162
N
C
N
163
N
C
N
164
N
C
N
165
N
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
C
N
170
N
C
N
171
N
C
N
172
N
C
N
173
N
O
N
174
N
O
Y
175
N
N
N
176
N
N
Y
177
N
N
N
178
N
N
N
179
N
FE
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
N
N
213
S
C
N
214
N
C
N
215
N
O
N
216
N
C
Y
217
N
C
Y
218
N
N
Y
219
N
C
Y
220
N
C
Y
221
N
N
N
222
N
O
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
O
N
234
N
H
N
235
N
H
N
236
N
N
N
237
S
C
N
238
N
C
N
239
N
O
N
240
S
C
N
241
N
C
N
242
N
C
N
243
N
C
N
244
N
O
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
N
N
259
S
C
N
260
N
C
N
261
N
O
N
262
N
C
N
263
N
C
N
264
N
C
N
265
N
C
N
266
N
O
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
N
N
281
S
C
N
282
N
C
N
283
N
O
N
284
N
C
N
285
N
C
N
286
N
C
N
287
N
C
N
288
N
N
N
289
N
O
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
N
N
306
S
C
N
307
N
C
N
308
N
O
N
309
N
C
N
310
N
C
N
311
N
S
N
312
N
C
N
313
N
O
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
N
N
326
S
C
N
327
N
C
N
328
N
O
N
329
N
C
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
Y
335
N
C
N
336
N
O
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
N
353
N
C
N
354
N
C
N
355
N
O
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
N
N
366
S
C
N
367
N
C
N
368
N
O
N
369
N
C
N
370
N
O
N
371
N
O
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
N
N
380
S
C
N
381
N
C
N
382
N
O
N
383
R
C
N
384
N
O
N
385
N
C
N
386
N
O
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
N
N
397
S
C
N
398
N
C
N
399
N
O
N
400
N
C
Y
401
N
C
Y
402
N
C
Y
403
N
C
Y
404
N
N
Y
405
N
C
Y
406
N
C
Y
407
N
C
Y
408
N
C
Y
409
N
C
N
410
N
O
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
N
N
424
S
C
N
425
N
C
N
426
N
O
N
427
N
C
Y
428
N
C
Y
429
N
C
Y
430
N
C
Y
431
N
C
Y
432
N
C
Y
433
N
C
N
434
N
O
N
435
N
O
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
N
N
448
S
C
N
449
N
C
N
450
N
O
N
451
N
C
N
452
N
C
N
453
N
C
N
454
N
O
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
doub
N
131
N
sing
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
sing
N
136
N
doub
N
137
N
sing
N
138
N
doub
N
139
N
sing
N
140
N
sing
Y
141
N
doub
Y
142
N
sing
Y
143
N
sing
N
144
N
sing
Y
145
N
doub
N
146
N
sing
Y
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
doub
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
doub
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
doub
N
170
N
sing
N
171
N
sing
N
172
N
sing
Y
173
N
sing
Y
174
N
sing
Y
175
N
doub
N
176
N
sing
Y
177
N
sing
N
178
N
sing
Y
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
doub
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
doub
N
189
N
doub
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
doub
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
doub
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
Y
222
N
sing
Y
223
N
doub
Y
224
N
doub
N
225
N
sing
Y
226
N
sing
N
227
N
sing
Y
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
doub
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
doub
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
doub
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
doub
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
doub
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
Y
330
N
doub
Y
331
N
sing
Y
332
N
sing
N
333
N
sing
Y
334
N
doub
N
335
N
sing
Y
336
N
doub
N
337
N
sing
Y
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
doub
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
doub
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
doub
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
doub
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
Y
399
N
doub
Y
400
N
sing
Y
401
N
sing
N
402
N
sing
Y
403
N
doub
Y
404
N
sing
Y
405
N
sing
N
406
N
sing
Y
407
N
sing
Y
408
N
doub
N
409
N
sing
Y
410
N
doub
N
411
N
sing
Y
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
doub
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
Y
427
N
doub
Y
428
N
sing
Y
429
N
sing
N
430
N
sing
Y
431
N
doub
N
432
N
sing
Y
433
N
doub
N
434
N
sing
Y
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
doub
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
57
1498
1505
10.1107/S0907444901010423
11679712
Structure of cytochrome c2 from Rhodospirillum centenum.
2001
US
Biochemistry
BICHAW
0033
0006-2960
33
8306
8312
Interaction Between Cytochrome c2 and Reaction Centers from Purple Bacteria
1994
US
Biochemistry
BICHAW
0033
0006-2960
33
13517
13523
Relationship Between Rate and Free Energy Difference for Electron Transfer from Cytochrome c2 to the Reaction Center in Rhodobacter sphaeroides.
1994
10.2210/pdb1jdl/pdb
pdb_00001jdl
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
298
1
1
1
IMAGE PLATE
1999-10-10
RIGAKU RAXIS IIC
IMAGE PLATE
1999-10-12
RIGAKU RAXIS IIC
IMAGE PLATE
1999-10-15
RIGAKU RAXIS IIC
graphite
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200HB
1.5418
ROTATING ANODE
RIGAKU RU200
1.5418
ROTATING ANODE
RIGAKU RU200
13052.742
CYTOCHROME C2, ISO-2
1
nat
polymer
616.487
PROTOPORPHYRIN IX CONTAINING FE
1
syn
non-polymer
18.015
water
87
nat
water
C552
no
no
EDGDPAKGEAVFKKCMACHRVGPDAKNLVGPALTGVIDRQAGTAPGFNYSAINHAAGEAGLHWTPENIIAYLPDPNAFLR
KFLADAGHAEQAKGSTKMVFKLPDEQERKDVVAYLKQFSPQ
EDGDPAKGEAVFKKCMACHRVGPDAKNLVGPALTGVIDRQAGTAPGFNYSAINHAAGEAGLHWTPENIIAYLPDPNAFLR
KFLADAGHAEQAKGSTKMVFKLPDEQERKDVVAYLKQFSPQ
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Rhodospirillum
sample
34018
Rhodospirillum centenum
3
2.139
42.54
VAPOR DIFFUSION, SITTING DROP
7
PEG 6000, potassium phosphate, pH 7, VAPOR DIFFUSION, SITTING DROP, temperature 298K
298
diffrn_source
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Data collection
Database references
Derived calculations
Refinement description
1
0
2001-11-07
1
1
2008-04-27
1
2
2011-07-13
1
3
2018-04-04
1
4
2023-08-16
_diffrn_source.type
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2001-06-14
REL
REL
HEM
PROTOPORPHYRIN IX CONTAINING FE
HOH
water
2C2C
PDB ENTRY 2c2c
PDB
experimental model
HEM
500
2
HEM
HEM
500
A
TIP
1000
3
HOH
HOH
1000
A
TIP
1001
3
HOH
HOH
1001
A
TIP
1002
3
HOH
HOH
1002
A
TIP
1003
3
HOH
HOH
1003
A
TIP
1004
3
HOH
HOH
1004
A
TIP
1005
3
HOH
HOH
1005
A
TIP
1006
3
HOH
HOH
1006
A
TIP
1007
3
HOH
HOH
1007
A
TIP
1008
3
HOH
HOH
1008
A
TIP
1009
3
HOH
HOH
1009
A
TIP
1010
3
HOH
HOH
1010
A
TIP
1011
3
HOH
HOH
1011
A
TIP
1012
3
HOH
HOH
1012
A
TIP
1013
3
HOH
HOH
1013
A
TIP
1014
3
HOH
HOH
1014
A
TIP
1015
3
HOH
HOH
1015
A
TIP
1016
3
HOH
HOH
1016
A
TIP
1017
3
HOH
HOH
1017
A
TIP
1018
3
HOH
HOH
1018
A
TIP
1019
3
HOH
HOH
1019
A
TIP
1020
3
HOH
HOH
1020
A
TIP
1021
3
HOH
HOH
1021
A
TIP
1022
3
HOH
HOH
1022
A
TIP
1023
3
HOH
HOH
1023
A
TIP
1024
3
HOH
HOH
1024
A
TIP
1025
3
HOH
HOH
1025
A
TIP
1026
3
HOH
HOH
1026
A
TIP
1027
3
HOH
HOH
1027
A
TIP
1028
3
HOH
HOH
1028
A
TIP
1029
3
HOH
HOH
1029
A
TIP
1030
3
HOH
HOH
1030
A
TIP
1031
3
HOH
HOH
1031
A
TIP
1032
3
HOH
HOH
1032
A
TIP
1033
3
HOH
HOH
1033
A
TIP
1034
3
HOH
HOH
1034
A
TIP
1035
3
HOH
HOH
1035
A
TIP
1036
3
HOH
HOH
1036
A
TIP
1037
3
HOH
HOH
1037
A
TIP
1038
3
HOH
HOH
1038
A
TIP
1039
3
HOH
HOH
1039
A
TIP
1040
3
HOH
HOH
1040
A
TIP
1041
3
HOH
HOH
1041
A
TIP
1042
3
HOH
HOH
1042
A
TIP
1043
3
HOH
HOH
1043
A
TIP
1044
3
HOH
HOH
1044
A
TIP
1045
3
HOH
HOH
1045
A
TIP
1046
3
HOH
HOH
1046
A
TIP
1047
3
HOH
HOH
1047
A
TIP
1048
3
HOH
HOH
1048
A
TIP
1049
3
HOH
HOH
1049
A
TIP
1050
3
HOH
HOH
1050
A
TIP
1051
3
HOH
HOH
1051
A
TIP
1052
3
HOH
HOH
1052
A
TIP
1053
3
HOH
HOH
1053
A
TIP
1054
3
HOH
HOH
1054
A
TIP
1055
3
HOH
HOH
1055
A
TIP
1056
3
HOH
HOH
1056
A
TIP
1057
3
HOH
HOH
1057
A
TIP
1058
3
HOH
HOH
1058
A
TIP
1059
3
HOH
HOH
1059
A
TIP
1060
3
HOH
HOH
1060
A
TIP
1061
3
HOH
HOH
1061
A
TIP
1062
3
HOH
HOH
1062
A
TIP
1063
3
HOH
HOH
1063
A
TIP
1064
3
HOH
HOH
1064
A
TIP
1065
3
HOH
HOH
1065
A
TIP
1066
3
HOH
HOH
1066
A
TIP
1067
3
HOH
HOH
1067
A
TIP
1068
3
HOH
HOH
1068
A
TIP
1069
3
HOH
HOH
1069
A
TIP
1070
3
HOH
HOH
1070
A
TIP
1071
3
HOH
HOH
1071
A
TIP
1072
3
HOH
HOH
1072
A
TIP
1073
3
HOH
HOH
1073
A
TIP
1075
3
HOH
HOH
1075
A
TIP
1076
3
HOH
HOH
1076
A
TIP
1078
3
HOH
HOH
1078
A
TIP
1079
3
HOH
HOH
1079
A
TIP
1080
3
HOH
HOH
1080
A
TIP
1081
3
HOH
HOH
1081
A
TIP
1082
3
HOH
HOH
1082
A
TIP
1083
3
HOH
HOH
1083
A
TIP
1084
3
HOH
HOH
1084
A
TIP
1086
3
HOH
HOH
1086
A
TIP
1087
3
HOH
HOH
1087
A
TIP
1088
3
HOH
HOH
1088
A
TIP
1089
3
HOH
HOH
1089
A
n
1
1
A
n
2
2
A
GLY
3
n
3
GLY
3
A
ASP
4
n
4
ASP
4
A
PRO
5
n
5
PRO
5
A
ALA
6
n
6
ALA
6
A
LYS
7
n
7
LYS
7
A
GLY
8
n
8
GLY
8
A
GLU
9
n
9
GLU
9
A
ALA
10
n
10
ALA
10
A
VAL
11
n
11
VAL
11
A
PHE
12
n
12
PHE
12
A
LYS
13
n
13
LYS
13
A
LYS
14
n
14
LYS
14
A
CYS
15
n
15
CYS
15
A
MET
16
n
16
MET
16
A
ALA
17
n
17
ALA
17
A
CYS
18
n
18
CYS
18
A
HIS
19
n
19
HIS
19
A
ARG
20
n
20
ARG
20
A
VAL
21
n
21
VAL
21
A
GLY
22
n
22
GLY
22
A
PRO
23
n
23
PRO
23
A
ASP
24
n
24
ASP
24
A
ALA
25
n
25
ALA
25
A
LYS
26
n
26
LYS
26
A
ASN
27
n
27
ASN
27
A
LEU
28
n
28
LEU
28
A
VAL
29
n
29
VAL
29
A
GLY
30
n
30
GLY
30
A
PRO
31
n
31
PRO
31
A
ALA
32
n
32
ALA
32
A
LEU
33
n
33
LEU
33
A
THR
34
n
34
THR
34
A
GLY
35
n
35
GLY
35
A
VAL
36
n
36
VAL
36
A
ILE
37
n
37
ILE
37
A
ASP
38
n
38
ASP
38
A
ARG
39
n
39
ARG
39
A
GLN
40
n
40
GLN
40
A
ALA
41
n
41
ALA
41
A
GLY
42
n
42
GLY
42
A
THR
43
n
43
THR
43
A
ALA
44
n
44
ALA
44
A
PRO
45
n
45
PRO
45
A
GLY
46
n
46
GLY
46
A
PHE
47
n
47
PHE
47
A
ASN
48
n
48
ASN
48
A
TYR
49
n
49
TYR
49
A
SER
50
n
50
SER
50
A
ALA
51
n
51
ALA
51
A
ILE
52
n
52
ILE
52
A
ASN
53
n
53
ASN
53
A
HIS
54
n
54
HIS
54
A
ALA
55
n
55
ALA
55
A
ALA
56
n
56
ALA
56
A
GLY
57
n
57
GLY
57
A
GLU
58
n
58
GLU
58
A
ALA
59
n
59
ALA
59
A
GLY
60
n
60
GLY
60
A
LEU
61
n
61
LEU
61
A
HIS
62
n
62
HIS
62
A
TRP
63
n
63
TRP
63
A
THR
64
n
64
THR
64
A
PRO
65
n
65
PRO
65
A
GLU
66
n
66
GLU
66
A
ASN
67
n
67
ASN
67
A
ILE
68
n
68
ILE
68
A
ILE
69
n
69
ILE
69
A
ALA
70
n
70
ALA
70
A
TYR
71
n
71
TYR
71
A
LEU
72
n
72
LEU
72
A
PRO
73
n
73
PRO
73
A
ASP
74
n
74
ASP
74
A
PRO
75
n
75
PRO
75
A
ASN
76
n
76
ASN
76
A
ALA
77
n
77
ALA
77
A
PHE
78
n
78
PHE
78
A
LEU
79
n
79
LEU
79
A
ARG
80
n
80
ARG
80
A
LYS
81
n
81
LYS
81
A
PHE
82
n
82
PHE
82
A
LEU
83
n
83
LEU
83
A
ALA
84
n
84
ALA
84
A
ASP
85
n
85
ASP
85
A
ALA
86
n
86
ALA
86
A
GLY
87
n
87
GLY
87
A
HIS
88
n
88
HIS
88
A
ALA
89
n
89
ALA
89
A
GLU
90
n
90
GLU
90
A
GLN
91
n
91
GLN
91
A
ALA
92
n
92
ALA
92
A
LYS
93
n
93
LYS
93
A
GLY
94
n
94
GLY
94
A
SER
95
n
95
SER
95
A
THR
96
n
96
THR
96
A
LYS
97
n
97
LYS
97
A
MET
98
n
98
MET
98
A
VAL
99
n
99
VAL
99
A
PHE
100
n
100
PHE
100
A
LYS
101
n
101
LYS
101
A
LEU
102
n
102
LEU
102
A
PRO
103
n
103
PRO
103
A
ASP
104
n
104
ASP
104
A
GLU
105
n
105
GLU
105
A
GLN
106
n
106
GLN
106
A
GLU
107
n
107
GLU
107
A
ARG
108
n
108
ARG
108
A
LYS
109
n
109
LYS
109
A
ASP
110
n
110
ASP
110
A
VAL
111
n
111
VAL
111
A
VAL
112
n
112
VAL
112
A
ALA
113
n
113
ALA
113
A
TYR
114
n
114
TYR
114
A
LEU
115
n
115
LEU
115
A
LYS
116
n
116
LYS
116
A
GLN
117
n
117
GLN
117
A
PHE
118
n
118
PHE
118
A
SER
119
n
119
SER
119
A
PRO
120
n
120
PRO
120
A
n
121
121
A
author_defined_assembly
1
monomeric
A
HIS
19
A
NE2
HIS
19
1_555
A
HEM
500
B
FE
HEM
1_555
A
HEM
500
B
NA
HEM
1_555
89.0
A
HIS
19
A
NE2
HIS
19
1_555
A
HEM
500
B
FE
HEM
1_555
A
HEM
500
B
NB
HEM
1_555
91.2
A
HEM
500
B
NA
HEM
1_555
A
HEM
500
B
FE
HEM
1_555
A
HEM
500
B
NB
HEM
1_555
89.7
A
HIS
19
A
NE2
HIS
19
1_555
A
HEM
500
B
FE
HEM
1_555
A
HEM
500
B
NC
HEM
1_555
89.6
A
HEM
500
B
NA
HEM
1_555
A
HEM
500
B
FE
HEM
1_555
A
HEM
500
B
NC
HEM
1_555
178.6
A
HEM
500
B
NB
HEM
1_555
A
HEM
500
B
FE
HEM
1_555
A
HEM
500
B
NC
HEM
1_555
90.2
A
HIS
19
A
NE2
HIS
19
1_555
A
HEM
500
B
FE
HEM
1_555
A
HEM
500
B
ND
HEM
1_555
85.5
A
HEM
500
B
NA
HEM
1_555
A
HEM
500
B
FE
HEM
1_555
A
HEM
500
B
ND
HEM
1_555
90.0
A
HEM
500
B
NB
HEM
1_555
A
HEM
500
B
FE
HEM
1_555
A
HEM
500
B
ND
HEM
1_555
176.7
A
HEM
500
B
NC
HEM
1_555
A
HEM
500
B
FE
HEM
1_555
A
HEM
500
B
ND
HEM
1_555
90.0
A
HIS
19
A
NE2
HIS
19
1_555
A
HEM
500
B
FE
HEM
1_555
A
MET
98
A
SD
MET
98
1_555
172.4
A
HEM
500
B
NA
HEM
1_555
A
HEM
500
B
FE
HEM
1_555
A
MET
98
A
SD
MET
98
1_555
85.8
A
HEM
500
B
NB
HEM
1_555
A
HEM
500
B
FE
HEM
1_555
A
MET
98
A
SD
MET
98
1_555
94.3
A
HEM
500
B
NC
HEM
1_555
A
HEM
500
B
FE
HEM
1_555
A
MET
98
A
SD
MET
98
1_555
95.6
A
HEM
500
B
ND
HEM
1_555
A
HEM
500
B
FE
HEM
1_555
A
MET
98
A
SD
MET
98
1_555
88.9
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
GLU
1
A
GLU
1
1
Y
1
A
ASP
2
A
ASP
2
1
Y
1
A
GLN
121
A
GLN
121
1
Y
1
A
LEU
28
-129.13
-132.70
1
A
ASP
74
-166.69
87.11
1
A
VAL
99
-100.38
72.43
25.2
-0.50
-0.05
0
0
0
0
0.2100000
0.1900000
1.7
20
1079
13248
12801
8.4
95.4
random
1
THROUGHOUT
2
0
SAD, MIR,MOLECULAR REPLACEMENT
PDB ENTRY 2c2c
Engh & Huber
0.19
0.20
5.00
0.11
0.08
1.7
20
87
1022
43
0
892
1.3
0.006
21.4
1.47
0.2626000
0.2661000
1.76
81
907
88.4
0.2539000
0.2391000
1.83
122
1039
97.9
0.1812000
0.1955000
1.91
139
1117
100
0.2201000
0.2002000
2.02
135
1154
100
0.1886000
0.1957000
2.14
124
1174
100
0.2104000
0.2093000
2.31
132
1196
100
21.9
1.7
20
1JDL
13248
13248
2
0
0.0700000
1
2986
16.9
98.6
0.3200000
1.7
20
149
1169
10
88.4
refinement
CNS
data reduction
DENZO
data scaling
SCALEPACK
phasing
CNS
Structure of cytochrome c2 from Rhodospirillum Centenum
1
N
N
2
N
N
3
N
N
A
ASP
4
A
ASP
4
HELX_P
A
PHE
12
A
PHE
12
1
1
9
A
LYS
13
A
LYS
13
HELX_P
A
CYS
15
A
CYS
15
5
2
3
A
SER
50
A
SER
50
HELX_P
A
ALA
59
A
ALA
59
1
3
10
A
THR
64
A
THR
64
HELX_P
A
LEU
72
A
LEU
72
1
4
9
A
ASP
74
A
ASP
74
HELX_P
A
ALA
86
A
ALA
86
1
5
13
A
HIS
88
A
HIS
88
HELX_P
A
LYS
93
A
LYS
93
5
6
6
A
ASP
104
A
ASP
104
HELX_P
A
LYS
116
A
LYS
116
1
7
13
A
GLN
117
A
GLN
117
HELX_P
A
SER
119
A
SER
119
5
8
3
metalc
2.097
A
HIS
19
A
NE2
HIS
19
1_555
A
HEM
500
B
FE
HEM
1_555
metalc
2.320
A
MET
98
A
SD
MET
98
1_555
A
HEM
500
B
FE
HEM
1_555
ELECTRON TRANSPORT
ALPHA HELIX, ELECTRON TRANSPORT
CYC22_RHOCE
UNP
1
1
P81154
EDGDPAKGEAVFKKCMACHRVGPDAKNLVGPALTGVIDRQAGTAPGFNYSAINHAAGEAGLHWTPENIIAYLPDPNAFLR
KFLADAGHAEQAKGSTKMVFKLPDEQERKDVVAYLKQFSPQ
1
121
1JDL
1
121
P81154
A
1
1
121
BINDING SITE FOR RESIDUE HEM A 500
A
HEM
500
Software
22
A
LYS
14
A
LYS
14
22
1_555
A
CYS
15
A
CYS
15
22
1_555
A
CYS
18
A
CYS
18
22
1_555
A
HIS
19
A
HIS
19
22
1_555
A
VAL
29
A
VAL
29
22
1_555
A
PRO
31
A
PRO
31
22
1_555
A
ARG
39
A
ARG
39
22
1_555
A
ALA
41
A
ALA
41
22
1_555
A
GLY
42
A
GLY
42
22
1_555
A
ASN
48
A
ASN
48
22
4_555
A
TYR
49
A
TYR
49
22
1_555
A
SER
50
A
SER
50
22
1_555
A
ASN
53
A
ASN
53
22
1_555
A
TRP
63
A
TRP
63
22
1_555
A
TYR
71
A
TYR
71
22
1_555
A
THR
96
A
THR
96
22
1_555
A
LYS
97
A
LYS
97
22
1_555
A
MET
98
A
MET
98
22
1_555
A
PHE
100
A
PHE
100
22
1_555
A
LEU
102
A
LEU
102
22
1_555
A
HOH
1009
C
HOH
22
1_555
A
HOH
1022
C
HOH
22
1_555
19
P 21 21 21