0.013114 0.000000 0.000000 0.000000 0.018961 0.000000 0.000000 0.000000 0.011924 0.00000 0.00000 0.00000 Maris, A.E. Sawaya, M.R. Kaczor-Grzeskowiak, M. Jarvis, M.R. Bearson, S.M.D. Kopka, M.L. Schroder, I. Gunsalus, R.P. Dickerson, R.E. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 76.257 52.741 83.863 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N O N 75 N P N 76 N O N 77 N O N 78 N O N 79 N C N 80 R C N 81 N O N 82 S C N 83 N O N 84 N C N 85 R C Y 86 N N Y 87 N C Y 88 N N Y 89 N C Y 90 N C N 91 N N Y 92 N N Y 93 N C Y 94 N N Y 95 N C N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N O N 111 N P N 112 N O N 113 N O N 114 N O N 115 N C N 116 R C N 117 N O N 118 S C N 119 N O N 120 N C N 121 R C N 122 N N N 123 N C N 124 N O N 125 N N N 126 N C N 127 N N N 128 N C N 129 N C N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N P N 146 N O N 147 N O N 148 N O N 149 N C N 150 R C N 151 N O N 152 S C N 153 N O N 154 N C N 155 R C Y 156 N N Y 157 N C Y 158 N N Y 159 N C N 160 N C N 161 N O N 162 N N N 163 N C N 164 N N N 165 N N Y 166 N C N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N O N 182 N P N 183 N O N 184 N O N 185 N O N 186 N C N 187 R C N 188 N O N 189 S C N 190 N O N 191 N C N 192 R C N 193 N N N 194 N C N 195 N O N 196 N N N 197 N C N 198 N O N 199 N C N 200 N C N 201 N C N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N N N 218 S C N 219 N C N 220 N O N 221 N C N 222 N C N 223 N C N 224 N O N 225 N N N 226 N O N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N N N 238 S C N 239 N C N 240 N O N 241 N C N 242 N C N 243 N C N 244 N O N 245 N O N 246 N O N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N N N 257 N C N 258 N C N 259 N O N 260 N O N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N N N 267 S C N 268 N C N 269 N O N 270 N C Y 271 N C Y 272 N N Y 273 N C Y 274 N C Y 275 N N N 276 N O N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N O N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 S C N 295 N C N 296 N C N 297 N C N 298 N O N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N N N 313 S C N 314 N C N 315 N O N 316 N C N 317 N C N 318 N C N 319 N C N 320 N O N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N N N 335 S C N 336 N C N 337 N O N 338 N C N 339 N C N 340 N C N 341 N C N 342 N N N 343 N O N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N N N 360 S C N 361 N C N 362 N O N 363 N C N 364 N C N 365 N S N 366 N C N 367 N O N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N N N 380 S C N 381 N C N 382 N O N 383 N O N 384 N C N 385 N C N 386 N SE N 387 N C N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N N N 400 S C N 401 N C N 402 N O N 403 N C Y 404 N C Y 405 N C Y 406 N C Y 407 N C Y 408 N C Y 409 N C N 410 N O N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N N N 423 S C N 424 N C N 425 N O N 426 N C N 427 N C N 428 N C N 429 N O N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N N N 440 S C N 441 N C N 442 N O N 443 N C N 444 N O N 445 N O N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N S N 454 N O N 455 N O N 456 N O N 457 N O N 458 N N N 459 S C N 460 N C N 461 N O N 462 R C N 463 N O N 464 N C N 465 N O N 466 N H N 467 N H N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 475 N N N 476 S C N 477 N C N 478 N O N 479 N C Y 480 N C Y 481 N C Y 482 N C Y 483 N N Y 484 N C Y 485 N C Y 486 N C Y 487 N C Y 488 N C N 489 N O N 490 N H N 491 N H N 492 N H N 493 N H N 494 N H N 495 N H N 496 N H N 497 N H N 498 N H N 499 N H N 500 N H N 501 N H N 502 N N N 503 S C N 504 N C N 505 N O N 506 N C N 507 N C N 508 N C N 509 N O N 510 N H N 511 N H N 512 N H N 513 N H N 514 N H N 515 N H N 516 N H N 517 N H N 518 N H N 519 N H N 520 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N doub N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing Y 93 N sing Y 94 N sing Y 95 N doub N 96 N sing Y 97 N sing Y 98 N sing Y 99 N doub N 100 N sing Y 101 N doub N 102 N sing N 103 N sing Y 104 N sing Y 105 N doub N 106 N sing Y 107 N sing N 108 N sing N 109 N sing N 110 N doub N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N doub N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N doub N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing Y 166 N sing Y 167 N sing Y 168 N doub N 169 N sing Y 170 N sing N 171 N sing Y 172 N doub N 173 N doub N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N doub N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N doub N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N doub N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N doub N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N doub N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N doub N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N doub N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N doub N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N doub N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N doub N 272 N sing N 273 N sing N 274 N sing N 275 N sing Y 276 N sing Y 277 N doub Y 278 N doub N 279 N sing Y 280 N sing N 281 N sing Y 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N doub N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N doub N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N doub N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N doub N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N doub N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N doub N 399 N sing N 400 N sing N 401 N sing N 402 N sing Y 403 N doub Y 404 N sing Y 405 N sing N 406 N sing Y 407 N doub N 408 N sing Y 409 N doub N 410 N sing Y 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N doub N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N doub N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N doub N 446 N doub N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N doub N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N doub N 472 N sing N 473 N sing N 474 N sing N 475 N sing Y 476 N doub Y 477 N sing Y 478 N sing N 479 N sing Y 480 N doub Y 481 N sing Y 482 N sing N 483 N sing Y 484 N sing Y 485 N doub N 486 N sing Y 487 N doub N 488 N sing Y 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N sing N 495 N sing N 496 N sing N 497 N sing N 498 N sing N 499 N doub N 500 N sing N 501 N sing N 502 N sing N 503 N sing N 504 N sing N 505 N sing N 506 N sing N 507 N sing N 508 N sing N 509 N sing N 510 N sing US Nat.Struct.Biol. NSBIEW 2024 1072-8368 9 771 778 10.1038/nsb845 12352954 Dimerization allows DNA target site recognition by the NarL response regulator. 2002 10.2210/pdb1je8/pdb pdb_00001je8 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 105.0 1 Collimating mirror optics, double slit monochromator CCD 2000-08-24 ADSC QUANTUM 4 SI 111 Channel SINGLE WAVELENGTH M x-ray 1 1.10002 1.0 X8C NSLS 1.10002 SYNCHROTRON NSLS BEAMLINE X8C E. Coli NirB -74 half site palindrome 6133.979 5'-D(*CP*GP*TP*AP*CP*CP*CP*AP*TP*TP*AP*AP*TP*GP*GP*GP*TP*AP*CP*G)-3' 4 syn polymer 9827.909 Nitrate/Nitrite Response Regulator Protein NARL DNA Binding Domain (147-216) 4 man polymer 96.063 SULFATE ION 8 syn non-polymer 18.015 water 330 nat water no no (DC)(DG)(DT)(DA)(DC)(DC)(DC)(DA)(DT)(DT)(DA)(DA)(DT)(DG)(DG)(DG)(DT)(DA)(DC)(DG) CGTACCCATTAATGGGTACG C,D,G,H polydeoxyribonucleotide no yes (MSE)RGSHHHHHHGSATTERDVNQLTPRERDILKLIAQGLPNK(MSE)IARRLDITESTVKVHVKH(MSE)LKK(MSE) KLKSRVEAAVWVHQERIF MRGSHHHHHHGSATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER IF A,B,E,F polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Escherichia Escherichia sample 562 Escherichia coli 562 Escherichia coli JM109 plasmid pMJ05 1 2.65 52.6 VAPOR DIFFUSION, HANGING DROP 7.5 ammonium sulfate, TRIS, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K 298.0 ammonium sulfate 1 TRIS 1 -0.780 1 19 C 1 D 40 -3.379 C_DC1:DG40_D 1 -7.801 0.040 -0.084 -0.209 -4.168 1 19 C 2 D 39 3.479 C_DG2:DC39_D 2 -7.620 -0.572 -0.297 -0.192 0.456 1 20 C 3 D 38 13.698 C_DT3:DA38_D 3 -15.701 0.115 0.155 -0.157 1.580 1 20 C 4 D 37 -0.631 C_DA4:DT37_D 4 6.564 0.170 -0.053 0.027 16.331 1 19 C 5 D 36 0.463 C_DC5:DG36_D 5 -22.230 0.069 -0.036 -0.232 -2.800 1 19 C 6 D 35 2.174 C_DC6:DG35_D 6 -16.785 0.473 0.283 -0.153 -14.752 1 19 C 7 D 34 1.368 C_DC7:DG34_D 7 0.307 0.226 0.204 -0.252 -2.635 1 20 C 8 D 33 4.467 C_DA8:DT33_D 8 -7.159 0.076 -0.127 -0.209 3.436 1 20 C 9 D 32 5.192 C_DT9:DA32_D 9 -11.515 -0.078 -0.018 -0.101 4.836 1 20 C 10 D 31 2.861 C_DT10:DA31_D 10 -10.660 -0.003 -0.096 -0.079 -5.850 1 20 C 11 D 30 4.105 C_DA11:DT30_D 11 -9.058 0.127 -0.091 -0.086 1.155 1 20 C 12 D 29 5.500 C_DA12:DT29_D 12 -10.803 -0.025 0.243 -0.123 2.273 1 20 C 13 D 28 0.335 C_DT13:DA28_D 13 -7.369 -0.263 -0.165 -0.308 15.580 1 19 C 14 D 27 2.909 C_DG14:DC27_D 14 -1.859 -0.240 0.337 -0.146 3.942 1 19 C 15 D 26 0.132 C_DG15:DC26_D 15 -14.164 -0.158 0.070 -0.288 -19.628 1 19 C 16 D 25 3.361 C_DG16:DC25_D 16 -20.647 -0.218 -0.260 -0.088 0.125 1 20 C 17 D 24 -0.022 C_DT17:DA24_D 17 6.152 -0.258 -0.038 -0.088 2.869 1 20 C 18 D 23 11.958 C_DA18:DT23_D 18 -15.988 -0.076 0.188 -0.224 6.323 1 19 C 19 D 22 1.553 C_DC19:DG22_D 19 -10.295 0.306 -0.065 -0.295 5.031 1 19 C 20 D 21 0.739 C_DG20:DC21_D 20 -3.536 -0.148 0.166 -0.206 -3.818 1 19 G 1 H 40 -3.816 G_DC1:DG40_H 21 -5.421 0.297 -0.061 -0.290 -6.990 1 19 G 2 H 39 2.452 G_DG2:DC39_H 22 -10.147 -0.599 -0.220 -0.267 -1.622 1 20 G 3 H 38 10.206 G_DT3:DA38_H 23 -15.737 0.162 0.190 -0.218 -0.885 1 20 G 4 H 37 -1.570 G_DA4:DT37_H 24 6.352 0.233 -0.091 -0.069 21.615 1 19 G 5 H 36 1.440 G_DC5:DG36_H 25 -24.633 0.081 -0.157 -0.147 -2.040 1 19 G 6 H 35 0.503 G_DC6:DG35_H 26 -13.930 0.300 0.090 -0.261 -15.720 1 19 G 7 H 34 2.248 G_DC7:DG34_H 27 -1.773 0.255 0.329 -0.169 -1.229 1 20 G 8 H 33 1.213 G_DA8:DT33_H 28 -5.888 0.217 -0.157 -0.299 1.034 1 20 G 9 H 32 4.856 G_DT9:DA32_H 29 -9.689 0.004 0.202 -0.201 6.284 1 20 G 10 H 31 3.371 G_DT10:DA31_H 30 -10.291 -0.270 -0.156 -0.150 -4.937 1 20 G 11 H 30 3.281 G_DA11:DT30_H 31 -8.706 -0.063 -0.097 -0.126 -1.587 1 20 G 12 H 29 5.434 G_DA12:DT29_H 32 -10.292 0.014 0.170 -0.131 2.367 1 20 G 13 H 28 3.572 G_DT13:DA28_H 33 -8.243 -0.022 -0.144 -0.164 12.876 1 19 G 14 H 27 2.081 G_DG14:DC27_H 34 0.089 -0.401 0.179 -0.237 5.518 1 19 G 15 H 26 0.479 G_DG15:DC26_H 35 -15.969 -0.378 0.331 -0.281 -15.504 1 19 G 16 H 25 2.443 G_DG16:DC25_H 36 -20.563 -0.026 0.069 -0.217 -0.100 1 20 G 17 H 24 1.063 G_DT17:DA24_H 37 5.439 -0.110 -0.002 0.038 1.561 1 20 G 18 H 23 12.253 G_DA18:DT23_H 38 -15.230 -0.252 0.152 -0.191 5.210 1 19 G 19 H 22 3.169 G_DC19:DG22_H 39 -10.144 0.567 -0.198 -0.326 0.537 1 19 G 20 H 21 -1.302 G_DG20:DC21_H 40 -6.926 -0.107 -0.018 -0.232 3.431 33.801 C C 1 2 17.567 D D 40 39 3.400 10.038 1.117 0.209 CC_DC1DG2:DC39DG40_DD 1 4.530 -7.927 32.006 -1.384 -1.134 3.086 33.956 C C 2 3 5.655 D D 39 38 3.219 3.291 0.680 -0.257 CC_DG2DT3:DA38DC39_DD 2 -3.841 6.600 33.588 -0.951 -1.760 2.344 29.027 C C 3 4 28.122 D D 38 37 3.187 13.551 -0.195 -1.001 CC_DT3DA4:DT37DA38_DD 3 2.428 -5.038 25.617 -4.684 0.870 3.316 30.108 C C 4 5 -9.444 D D 37 36 3.181 -4.884 0.547 -0.985 CC_DA4DC5:DG36DT37_DD 4 1.208 -2.336 29.695 -0.898 -0.805 3.246 39.700 C C 5 6 13.656 D D 36 35 3.661 9.188 -0.316 -1.506 CC_DC5DC6:DG35DG36_DD 5 -2.979 4.427 38.553 -3.366 0.094 3.574 33.517 C C 6 7 2.881 D D 35 34 3.603 1.654 0.459 -1.100 CC_DC6DC7:DG34DG35_DD 6 5.366 -9.347 33.057 -2.208 0.178 2.266 30.130 C C 7 8 30.950 D D 34 33 3.027 15.259 0.172 -0.658 CC_DC7DA8:DT33DG34_DD 7 5.824 -11.814 25.405 -4.013 0.718 3.279 31.527 C C 8 9 -3.368 D D 33 32 3.231 -1.829 0.234 -0.838 CC_DA8DT9:DA32DT33_DD 8 1.035 -1.906 31.459 -1.203 -0.240 3.338 33.714 C C 9 10 -7.478 D D 32 31 3.293 -4.325 -0.338 -0.609 CC_DT9DT10:DA31DA32_DD 9 0.537 -0.928 33.439 -0.334 0.671 3.486 40.945 C C 10 11 -5.534 D D 31 30 3.463 -3.865 0.029 -0.426 CC_DT10DA11:DT30DA31_DD 10 -0.754 1.080 40.763 -0.159 -0.130 3.171 33.378 C C 11 12 -9.318 D D 30 29 3.164 -5.322 0.329 -0.589 CC_DA11DA12:DT29DT30_DD 11 -3.253 5.695 32.806 -0.163 -1.099 3.418 32.158 C C 12 13 -5.930 D D 29 28 3.341 -3.279 -0.391 -1.015 CC_DA12DT13:DA28DT29_DD 12 0.560 -1.013 31.990 -1.225 0.809 2.207 29.660 C C 13 14 29.376 D D 28 27 3.009 14.296 -0.038 -0.774 CC_DT13DG14:DC27DA28_DD 13 -6.612 13.587 25.212 -4.120 -1.131 3.582 34.883 C C 14 15 4.123 D D 27 26 3.621 2.466 -0.557 -0.967 CC_DG14DG15:DC26DC27_DD 14 -3.227 5.395 34.653 -2.027 0.389 3.332 37.877 C C 15 16 16.428 D D 26 25 3.834 10.518 0.389 -1.415 CC_DG15DG16:DC25DC26_DD 15 3.589 -5.606 36.267 -3.692 -0.083 3.240 30.948 C C 16 17 -13.751 D D 25 24 3.107 -7.261 -0.532 -0.784 CC_DG16DT17:DA24DC25_DD 16 -3.026 5.730 29.955 -0.084 0.420 2.236 31.294 C C 17 18 30.947 D D 24 23 3.159 15.939 0.120 -0.983 CC_DT17DA18:DT23DA24_DD 17 -1.455 2.825 26.980 -4.503 -0.467 3.142 30.847 C C 18 19 6.678 D D 23 22 3.288 3.538 -0.703 -0.317 CC_DA18DC19:DG22DT23_DD 18 3.253 -6.139 30.479 -1.277 1.948 3.371 35.635 C C 19 20 12.428 D D 22 21 3.316 7.531 -0.872 0.210 CC_DC19DG20:DC21DG22_DD 19 -4.599 7.590 34.559 -0.793 0.731 3.412 33.091 G G 1 2 16.680 H H 40 39 3.377 9.348 1.039 0.212 GG_DC1DG2:DC39DG40_HH 20 4.575 -8.163 31.455 -1.309 -1.001 3.087 34.196 G G 2 3 6.370 H H 39 38 3.217 3.728 0.546 -0.146 GG_DG2DT3:DA38DC39_HH 21 -4.506 7.698 33.707 -0.819 -1.618 2.203 30.041 G G 3 4 32.643 H H 38 37 3.254 16.051 -0.118 -1.033 GG_DT3DA4:DT37DA38_HH 22 2.510 -5.105 25.354 -4.989 0.696 3.168 30.245 G G 4 5 -16.454 H H 37 36 3.017 -8.471 0.565 -0.872 GG_DA4DC5:DG36DT37_HH 23 1.756 -3.411 29.009 -0.013 -0.739 3.352 39.782 G G 5 6 15.275 H H 36 35 3.825 10.277 -0.234 -1.448 GG_DC5DC6:DG35DG36_HH 24 -2.750 4.087 38.388 -3.461 -0.013 3.560 34.030 G G 6 7 6.327 H H 35 34 3.644 3.686 0.571 -1.011 GG_DC6DC7:DG34DG35_HH 25 4.358 -7.480 33.561 -2.379 -0.205 2.190 29.862 G G 7 8 29.444 H H 34 33 2.969 14.432 0.034 -0.744 GG_DC7DA8:DT33DG34_HH 26 6.392 -13.041 25.431 -4.009 1.070 3.399 32.297 G G 8 9 -6.344 H H 33 32 3.322 -3.522 0.316 -0.983 GG_DA8DT9:DA32DT33_HH 27 -0.806 1.451 32.100 -1.123 -0.715 3.214 32.377 G G 9 10 -11.243 H H 32 31 3.223 -6.216 -0.319 -0.596 GG_DT9DT10:DA31DA32_HH 28 4.043 -7.312 31.539 0.025 1.283 3.494 41.447 G G 10 11 -3.872 H H 31 30 3.474 -2.738 0.089 -0.431 GG_DT10DA11:DT30DA31_HH 29 0.326 -0.461 41.359 -0.298 -0.088 3.284 34.105 G G 11 12 -8.118 H H 30 29 3.251 -4.746 0.365 -0.582 GG_DA11DA12:DT29DT30_HH 30 -1.320 2.257 33.758 -0.236 -0.833 3.289 32.135 G G 12 13 -2.675 H H 29 28 3.252 -1.480 -0.296 -0.873 GG_DA12DT13:DA28DT29_HH 31 -0.186 0.336 32.101 -1.312 0.501 2.306 28.352 G G 13 14 30.794 H H 28 27 3.086 14.308 -0.139 -0.669 GG_DT13DG14:DC27DA28_HH 32 -5.433 11.693 23.938 -4.330 -0.841 3.501 34.986 G G 14 15 1.694 H H 27 26 3.504 1.014 -0.446 -1.010 GG_DG14DG15:DC26DC27_HH 33 -5.586 9.331 34.536 -1.845 -0.165 3.232 39.626 G G 15 16 14.365 H H 26 25 3.675 9.636 0.409 -1.549 GG_DG15DG16:DC25DC26_HH 34 3.470 -5.172 38.331 -3.496 -0.168 3.318 29.823 G G 16 17 -10.815 H H 25 24 3.183 -5.534 -0.478 -0.967 GG_DG16DT17:DA24DC25_HH 35 -0.828 1.617 29.305 -0.723 0.756 2.340 28.858 G G 17 18 28.137 H H 24 23 3.173 13.486 0.116 -1.007 GG_DT17DA18:DT23DA24_HH 36 -1.942 4.051 25.500 -4.716 -0.621 3.139 34.342 G G 18 19 5.880 H H 23 22 3.268 3.461 -0.651 -0.351 GG_DA18DC19:DG22DT23_HH 37 3.440 -5.844 34.004 -1.128 1.632 3.459 33.690 G G 19 20 14.415 H H 22 21 3.432 8.262 -0.977 0.218 GG_DC19DG20:DC21DG22_HH 38 -3.149 5.495 32.542 -1.067 1.137 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_conn struct_ref_seq_dif struct_site chem_comp_atom chem_comp_bond repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations Refinement description Data collection 1 0 2002-09-27 1 1 2008-04-27 1 2 2011-07-13 1 3 2023-08-16 1 4 2023-11-15 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_leaving_atom_flag _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _chem_comp_atom.atom_id _chem_comp_bond.atom_id_2 1RNL contains the full-length unactivated protein. 1A04 contains the full-length unactivated protein. RCSB Y RCSB 2001-06-15 REL REL SO4 SULFATE ION HOH water DNA was synthesized using solid phase phosphoramidite chemistry. sample 1RNL DNA-Binding Domain of 1RNL bound to DNA PDB experimental model SO4 301 3 SO4 SO4 401 A SO4 305 3 SO4 SO4 405 A SO4 302 3 SO4 SO4 402 B SO4 306 3 SO4 SO4 406 B SO4 303 3 SO4 SO4 403 E SO4 307 3 SO4 SO4 407 E SO4 304 3 SO4 SO4 404 F SO4 308 3 SO4 SO4 408 F HOH 2 4 HOH HOH 21 C HOH 7 4 HOH HOH 22 C HOH 20 4 HOH HOH 23 C HOH 25 4 HOH HOH 24 C HOH 36 4 HOH HOH 25 C HOH 53 4 HOH HOH 26 C HOH 54 4 HOH HOH 27 C HOH 55 4 HOH HOH 28 C HOH 61 4 HOH HOH 29 C HOH 69 4 HOH HOH 30 C HOH 70 4 HOH HOH 31 C HOH 71 4 HOH HOH 32 C HOH 75 4 HOH HOH 33 C HOH 80 4 HOH HOH 34 C HOH 86 4 HOH HOH 35 C HOH 90 4 HOH HOH 36 C HOH 92 4 HOH HOH 37 C HOH 97 4 HOH HOH 38 C HOH 99 4 HOH HOH 39 C HOH 105 4 HOH HOH 40 C HOH 107 4 HOH HOH 41 C HOH 109 4 HOH HOH 42 C HOH 114 4 HOH HOH 43 C HOH 138 4 HOH HOH 44 C HOH 141 4 HOH HOH 45 C HOH 152 4 HOH HOH 46 C HOH 155 4 HOH HOH 47 C HOH 161 4 HOH HOH 48 C HOH 177 4 HOH HOH 49 C HOH 193 4 HOH HOH 50 C HOH 201 4 HOH HOH 51 C HOH 210 4 HOH HOH 52 C HOH 214 4 HOH HOH 53 C HOH 236 4 HOH HOH 54 C HOH 244 4 HOH HOH 55 C HOH 249 4 HOH HOH 56 C HOH 262 4 HOH HOH 57 C HOH 265 4 HOH HOH 58 C HOH 266 4 HOH HOH 59 C HOH 270 4 HOH HOH 60 C HOH 274 4 HOH HOH 61 C HOH 280 4 HOH HOH 62 C HOH 282 4 HOH HOH 63 C HOH 287 4 HOH HOH 64 C HOH 288 4 HOH HOH 65 C HOH 293 4 HOH HOH 66 C HOH 297 4 HOH HOH 67 C HOH 299 4 HOH HOH 68 C HOH 321 4 HOH HOH 69 C HOH 1 4 HOH HOH 41 D HOH 3 4 HOH HOH 42 D HOH 8 4 HOH HOH 43 D HOH 14 4 HOH HOH 44 D HOH 17 4 HOH HOH 45 D HOH 19 4 HOH HOH 46 D HOH 23 4 HOH HOH 47 D HOH 33 4 HOH HOH 48 D HOH 34 4 HOH HOH 49 D HOH 39 4 HOH HOH 50 D HOH 46 4 HOH HOH 51 D HOH 49 4 HOH HOH 52 D HOH 51 4 HOH HOH 53 D HOH 57 4 HOH HOH 54 D HOH 62 4 HOH HOH 55 D HOH 66 4 HOH HOH 56 D HOH 74 4 HOH HOH 57 D HOH 77 4 HOH HOH 58 D HOH 83 4 HOH HOH 59 D HOH 87 4 HOH HOH 60 D HOH 103 4 HOH HOH 61 D HOH 118 4 HOH HOH 62 D HOH 119 4 HOH HOH 63 D HOH 126 4 HOH HOH 64 D HOH 140 4 HOH HOH 65 D HOH 143 4 HOH HOH 66 D HOH 148 4 HOH HOH 67 D HOH 159 4 HOH HOH 68 D HOH 171 4 HOH HOH 69 D HOH 176 4 HOH HOH 70 D HOH 186 4 HOH HOH 71 D HOH 190 4 HOH HOH 72 D HOH 192 4 HOH HOH 73 D HOH 205 4 HOH HOH 74 D HOH 209 4 HOH HOH 75 D HOH 217 4 HOH HOH 76 D HOH 246 4 HOH HOH 77 D HOH 258 4 HOH HOH 78 D HOH 259 4 HOH HOH 79 D HOH 260 4 HOH HOH 80 D HOH 261 4 HOH HOH 81 D HOH 271 4 HOH HOH 82 D HOH 275 4 HOH HOH 83 D HOH 289 4 HOH HOH 84 D HOH 304 4 HOH HOH 85 D HOH 324 4 HOH HOH 86 D HOH 327 4 HOH HOH 87 D HOH 10 4 HOH HOH 21 G HOH 26 4 HOH HOH 22 G HOH 29 4 HOH HOH 23 G HOH 31 4 HOH HOH 24 G HOH 37 4 HOH HOH 25 G HOH 38 4 HOH HOH 26 G HOH 43 4 HOH HOH 27 G HOH 44 4 HOH HOH 28 G HOH 48 4 HOH HOH 29 G HOH 63 4 HOH HOH 30 G HOH 64 4 HOH HOH 31 G HOH 65 4 HOH HOH 32 G HOH 67 4 HOH HOH 33 G HOH 72 4 HOH HOH 34 G HOH 73 4 HOH HOH 35 G HOH 81 4 HOH HOH 36 G HOH 82 4 HOH HOH 37 G HOH 96 4 HOH HOH 38 G HOH 106 4 HOH HOH 39 G HOH 115 4 HOH HOH 40 G HOH 121 4 HOH HOH 41 G HOH 136 4 HOH HOH 42 G HOH 151 4 HOH HOH 43 G HOH 160 4 HOH HOH 44 G HOH 163 4 HOH HOH 45 G HOH 166 4 HOH HOH 46 G HOH 169 4 HOH HOH 47 G HOH 173 4 HOH HOH 48 G HOH 182 4 HOH HOH 49 G HOH 184 4 HOH HOH 50 G HOH 185 4 HOH HOH 51 G HOH 194 4 HOH HOH 52 G HOH 195 4 HOH HOH 53 G HOH 197 4 HOH HOH 54 G HOH 198 4 HOH HOH 55 G HOH 199 4 HOH HOH 56 G HOH 200 4 HOH HOH 57 G HOH 203 4 HOH HOH 58 G HOH 204 4 HOH HOH 59 G HOH 208 4 HOH HOH 60 G HOH 215 4 HOH HOH 61 G HOH 221 4 HOH HOH 62 G HOH 226 4 HOH HOH 63 G HOH 238 4 HOH HOH 64 G HOH 243 4 HOH HOH 65 G HOH 245 4 HOH HOH 66 G HOH 247 4 HOH HOH 67 G HOH 248 4 HOH HOH 68 G HOH 251 4 HOH HOH 69 G HOH 263 4 HOH HOH 70 G HOH 267 4 HOH HOH 71 G HOH 277 4 HOH HOH 72 G HOH 279 4 HOH HOH 73 G HOH 283 4 HOH HOH 74 G HOH 294 4 HOH HOH 75 G HOH 306 4 HOH HOH 76 G HOH 326 4 HOH HOH 77 G HOH 5 4 HOH HOH 41 H HOH 12 4 HOH HOH 42 H HOH 13 4 HOH HOH 43 H HOH 18 4 HOH HOH 44 H HOH 21 4 HOH HOH 45 H HOH 24 4 HOH HOH 46 H HOH 27 4 HOH HOH 47 H HOH 30 4 HOH HOH 48 H HOH 32 4 HOH HOH 49 H HOH 40 4 HOH HOH 50 H HOH 45 4 HOH HOH 51 H HOH 47 4 HOH HOH 52 H HOH 56 4 HOH HOH 53 H HOH 58 4 HOH HOH 54 H HOH 60 4 HOH HOH 55 H HOH 84 4 HOH HOH 56 H HOH 93 4 HOH HOH 57 H HOH 94 4 HOH HOH 58 H HOH 95 4 HOH HOH 59 H HOH 100 4 HOH HOH 60 H HOH 112 4 HOH HOH 61 H HOH 117 4 HOH HOH 62 H HOH 122 4 HOH HOH 63 H HOH 124 4 HOH HOH 64 H HOH 129 4 HOH HOH 65 H HOH 132 4 HOH HOH 66 H HOH 144 4 HOH HOH 67 H HOH 147 4 HOH HOH 68 H HOH 156 4 HOH HOH 69 H HOH 164 4 HOH HOH 70 H HOH 175 4 HOH HOH 71 H HOH 188 4 HOH HOH 72 H HOH 211 4 HOH HOH 73 H HOH 213 4 HOH HOH 74 H HOH 218 4 HOH HOH 75 H HOH 225 4 HOH HOH 76 H HOH 250 4 HOH HOH 77 H HOH 253 4 HOH HOH 78 H HOH 269 4 HOH HOH 79 H HOH 276 4 HOH HOH 80 H HOH 284 4 HOH HOH 81 H HOH 285 4 HOH HOH 82 H HOH 290 4 HOH HOH 83 H HOH 292 4 HOH HOH 84 H HOH 296 4 HOH HOH 85 H HOH 303 4 HOH HOH 86 H HOH 305 4 HOH HOH 87 H HOH 315 4 HOH HOH 88 H HOH 317 4 HOH HOH 89 H HOH 319 4 HOH HOH 90 H HOH 320 4 HOH HOH 91 H HOH 325 4 HOH HOH 92 H HOH 329 4 HOH HOH 93 H HOH 4 4 HOH HOH 406 A HOH 6 4 HOH HOH 407 A HOH 68 4 HOH HOH 408 A HOH 85 4 HOH HOH 409 A HOH 91 4 HOH HOH 410 A HOH 101 4 HOH HOH 411 A HOH 102 4 HOH HOH 412 A HOH 111 4 HOH HOH 413 A HOH 116 4 HOH HOH 414 A HOH 142 4 HOH HOH 415 A HOH 162 4 HOH HOH 416 A HOH 165 4 HOH HOH 417 A HOH 172 4 HOH HOH 418 A HOH 174 4 HOH HOH 419 A HOH 189 4 HOH HOH 420 A HOH 202 4 HOH HOH 421 A HOH 216 4 HOH HOH 422 A HOH 220 4 HOH HOH 423 A HOH 222 4 HOH HOH 424 A HOH 223 4 HOH HOH 425 A HOH 227 4 HOH HOH 426 A HOH 230 4 HOH HOH 427 A HOH 232 4 HOH HOH 428 A HOH 233 4 HOH HOH 429 A HOH 254 4 HOH HOH 430 A HOH 257 4 HOH HOH 431 A HOH 291 4 HOH HOH 432 A HOH 307 4 HOH HOH 433 A HOH 308 4 HOH HOH 434 A HOH 310 4 HOH HOH 435 A HOH 312 4 HOH HOH 436 A HOH 322 4 HOH HOH 437 A HOH 16 4 HOH HOH 407 B HOH 28 4 HOH HOH 408 B HOH 35 4 HOH HOH 409 B HOH 41 4 HOH HOH 410 B HOH 50 4 HOH HOH 411 B HOH 52 4 HOH HOH 412 B HOH 59 4 HOH HOH 413 B HOH 89 4 HOH HOH 414 B HOH 108 4 HOH HOH 415 B HOH 123 4 HOH HOH 416 B HOH 137 4 HOH HOH 417 B HOH 153 4 HOH HOH 418 B HOH 154 4 HOH HOH 419 B HOH 167 4 HOH HOH 420 B HOH 168 4 HOH HOH 421 B HOH 178 4 HOH HOH 422 B HOH 179 4 HOH HOH 423 B HOH 183 4 HOH HOH 424 B HOH 207 4 HOH HOH 425 B HOH 219 4 HOH HOH 426 B HOH 229 4 HOH HOH 427 B HOH 231 4 HOH HOH 428 B HOH 235 4 HOH HOH 429 B HOH 240 4 HOH HOH 430 B HOH 252 4 HOH HOH 431 B HOH 272 4 HOH HOH 432 B HOH 273 4 HOH HOH 433 B HOH 286 4 HOH HOH 434 B HOH 298 4 HOH HOH 435 B HOH 318 4 HOH HOH 436 B HOH 22 4 HOH HOH 408 E HOH 76 4 HOH HOH 409 E HOH 78 4 HOH HOH 410 E HOH 98 4 HOH HOH 411 E HOH 110 4 HOH HOH 412 E HOH 113 4 HOH HOH 413 E HOH 127 4 HOH HOH 414 E HOH 130 4 HOH HOH 415 E HOH 134 4 HOH HOH 416 E HOH 135 4 HOH HOH 417 E HOH 139 4 HOH HOH 418 E HOH 145 4 HOH HOH 419 E HOH 149 4 HOH HOH 420 E HOH 150 4 HOH HOH 421 E HOH 170 4 HOH HOH 422 E HOH 180 4 HOH HOH 423 E HOH 187 4 HOH HOH 424 E HOH 191 4 HOH HOH 425 E HOH 228 4 HOH HOH 426 E HOH 234 4 HOH HOH 427 E HOH 241 4 HOH HOH 428 E HOH 256 4 HOH HOH 429 E HOH 278 4 HOH HOH 430 E HOH 301 4 HOH HOH 431 E HOH 309 4 HOH HOH 432 E HOH 323 4 HOH HOH 433 E HOH 330 4 HOH HOH 434 E HOH 9 4 HOH HOH 409 F HOH 11 4 HOH HOH 410 F HOH 15 4 HOH HOH 411 F HOH 42 4 HOH HOH 412 F HOH 79 4 HOH HOH 413 F HOH 88 4 HOH HOH 414 F HOH 104 4 HOH HOH 415 F HOH 120 4 HOH HOH 416 F HOH 125 4 HOH HOH 417 F HOH 128 4 HOH HOH 418 F HOH 131 4 HOH HOH 419 F HOH 133 4 HOH HOH 420 F HOH 146 4 HOH HOH 421 F HOH 157 4 HOH HOH 422 F HOH 158 4 HOH HOH 423 F HOH 181 4 HOH HOH 424 F HOH 196 4 HOH HOH 425 F HOH 206 4 HOH HOH 426 F HOH 212 4 HOH HOH 427 F HOH 224 4 HOH HOH 428 F HOH 237 4 HOH HOH 429 F HOH 239 4 HOH HOH 430 F HOH 242 4 HOH HOH 431 F HOH 255 4 HOH HOH 432 F HOH 264 4 HOH HOH 433 F HOH 268 4 HOH HOH 434 F HOH 281 4 HOH HOH 435 F HOH 295 4 HOH HOH 436 F HOH 300 4 HOH HOH 437 F HOH 302 4 HOH HOH 438 F HOH 311 4 HOH HOH 439 F HOH 313 4 HOH HOH 440 F HOH 314 4 HOH HOH 441 F HOH 316 4 HOH HOH 442 F HOH 328 4 HOH HOH 443 F CYT 1 n 1 DC 1 C GUA 2 n 2 DG 2 C THY 3 n 3 DT 3 C ADE 4 n 4 DA 4 C CYT 5 n 5 DC 5 C CYT 6 n 6 DC 6 C CYT 7 n 7 DC 7 C ADE 8 n 8 DA 8 C THY 9 n 9 DT 9 C THY 10 n 10 DT 10 C ADE 11 n 11 DA 11 C ADE 12 n 12 DA 12 C THY 13 n 13 DT 13 C GUA 14 n 14 DG 14 C GUA 15 n 15 DG 15 C GUA 16 n 16 DG 16 C THY 17 n 17 DT 17 C ADE 18 n 18 DA 18 C CYT 19 n 19 DC 19 C GUA 20 n 20 DG 20 C CYT 21 n 1 DC 21 D GUA 22 n 2 DG 22 D THY 23 n 3 DT 23 D ADE 24 n 4 DA 24 D CYT 25 n 5 DC 25 D CYT 26 n 6 DC 26 D CYT 27 n 7 DC 27 D ADE 28 n 8 DA 28 D THY 29 n 9 DT 29 D THY 30 n 10 DT 30 D ADE 31 n 11 DA 31 D ADE 32 n 12 DA 32 D THY 33 n 13 DT 33 D GUA 34 n 14 DG 34 D GUA 35 n 15 DG 35 D GUA 36 n 16 DG 36 D THY 37 n 17 DT 37 D ADE 38 n 18 DA 38 D CYT 39 n 19 DC 39 D GUA 40 n 20 DG 40 D CYT 1 n 1 DC 1 G GUA 2 n 2 DG 2 G THY 3 n 3 DT 3 G ADE 4 n 4 DA 4 G CYT 5 n 5 DC 5 G CYT 6 n 6 DC 6 G CYT 7 n 7 DC 7 G ADE 8 n 8 DA 8 G THY 9 n 9 DT 9 G THY 10 n 10 DT 10 G ADE 11 n 11 DA 11 G ADE 12 n 12 DA 12 G THY 13 n 13 DT 13 G GUA 14 n 14 DG 14 G GUA 15 n 15 DG 15 G GUA 16 n 16 DG 16 G THY 17 n 17 DT 17 G ADE 18 n 18 DA 18 G CYT 19 n 19 DC 19 G GUA 20 n 20 DG 20 G CYT 21 n 1 DC 21 H GUA 22 n 2 DG 22 H THY 23 n 3 DT 23 H ADE 24 n 4 DA 24 H CYT 25 n 5 DC 25 H CYT 26 n 6 DC 26 H CYT 27 n 7 DC 27 H ADE 28 n 8 DA 28 H THY 29 n 9 DT 29 H THY 30 n 10 DT 30 H ADE 31 n 11 DA 31 H ADE 32 n 12 DA 32 H THY 33 n 13 DT 33 H GUA 34 n 14 DG 34 H GUA 35 n 15 DG 35 H GUA 36 n 16 DG 36 H THY 37 n 17 DT 37 H ADE 38 n 18 DA 38 H CYT 39 n 19 DC 39 H GUA 40 n 20 DG 40 H n 1 -12 A n 2 -11 A n 3 -10 A n 4 -9 A n 5 -8 A n 6 -7 A n 7 -6 A n 8 -5 A n 9 -4 A n 10 -3 A n 11 -2 A n 12 -1 A n 13 147 A n 14 148 A n 15 149 A n 16 150 A ARG 151 n 17 ARG 151 A ASP 152 n 18 ASP 152 A VAL 153 n 19 VAL 153 A ASN 154 n 20 ASN 154 A GLN 155 n 21 GLN 155 A LEU 156 n 22 LEU 156 A THR 157 n 23 THR 157 A PRO 158 n 24 PRO 158 A ARG 159 n 25 ARG 159 A GLU 160 n 26 GLU 160 A ARG 161 n 27 ARG 161 A ASP 162 n 28 ASP 162 A ILE 163 n 29 ILE 163 A LEU 164 n 30 LEU 164 A LYS 165 n 31 LYS 165 A LEU 166 n 32 LEU 166 A ILE 167 n 33 ILE 167 A ALA 168 n 34 ALA 168 A GLN 169 n 35 GLN 169 A GLY 170 n 36 GLY 170 A LEU 171 n 37 LEU 171 A PRO 172 n 38 PRO 172 A ASN 173 n 39 ASN 173 A LYS 174 n 40 LYS 174 A MSE 175 n 41 MSE 175 A ILE 176 n 42 ILE 176 A ALA 177 n 43 ALA 177 A ARG 178 n 44 ARG 178 A ARG 179 n 45 ARG 179 A LEU 180 n 46 LEU 180 A ASP 181 n 47 ASP 181 A ILE 182 n 48 ILE 182 A THR 183 n 49 THR 183 A GLU 184 n 50 GLU 184 A SER 185 n 51 SER 185 A THR 186 n 52 THR 186 A VAL 187 n 53 VAL 187 A LYS 188 n 54 LYS 188 A VAL 189 n 55 VAL 189 A HIS 190 n 56 HIS 190 A VAL 191 n 57 VAL 191 A LYS 192 n 58 LYS 192 A HIS 193 n 59 HIS 193 A MSE 194 n 60 MSE 194 A LEU 195 n 61 LEU 195 A LYS 196 n 62 LYS 196 A LYS 197 n 63 LYS 197 A MSE 198 n 64 MSE 198 A LYS 199 n 65 LYS 199 A LEU 200 n 66 LEU 200 A LYS 201 n 67 LYS 201 A SER 202 n 68 SER 202 A ARG 203 n 69 ARG 203 A VAL 204 n 70 VAL 204 A GLU 205 n 71 GLU 205 A ALA 206 n 72 ALA 206 A ALA 207 n 73 ALA 207 A VAL 208 n 74 VAL 208 A TRP 209 n 75 TRP 209 A VAL 210 n 76 VAL 210 A HIS 211 n 77 HIS 211 A GLN 212 n 78 GLN 212 A GLU 213 n 79 GLU 213 A ARG 214 n 80 ARG 214 A ILE 215 n 81 ILE 215 A PHE 216 n 82 PHE 216 A n 1 -12 B n 2 -11 B n 3 -10 B n 4 -9 B n 5 -8 B n 6 -7 B n 7 -6 B n 8 -5 B n 9 -4 B n 10 -3 B n 11 -2 B n 12 -1 B n 13 147 B n 14 148 B n 15 149 B n 16 150 B ARG 151 n 17 ARG 151 B ASP 152 n 18 ASP 152 B VAL 153 n 19 VAL 153 B ASN 154 n 20 ASN 154 B GLN 155 n 21 GLN 155 B LEU 156 n 22 LEU 156 B THR 157 n 23 THR 157 B PRO 158 n 24 PRO 158 B ARG 159 n 25 ARG 159 B GLU 160 n 26 GLU 160 B ARG 161 n 27 ARG 161 B ASP 162 n 28 ASP 162 B ILE 163 n 29 ILE 163 B LEU 164 n 30 LEU 164 B LYS 165 n 31 LYS 165 B LEU 166 n 32 LEU 166 B ILE 167 n 33 ILE 167 B ALA 168 n 34 ALA 168 B GLN 169 n 35 GLN 169 B GLY 170 n 36 GLY 170 B LEU 171 n 37 LEU 171 B PRO 172 n 38 PRO 172 B ASN 173 n 39 ASN 173 B LYS 174 n 40 LYS 174 B MSE 175 n 41 MSE 175 B ILE 176 n 42 ILE 176 B ALA 177 n 43 ALA 177 B ARG 178 n 44 ARG 178 B ARG 179 n 45 ARG 179 B LEU 180 n 46 LEU 180 B ASP 181 n 47 ASP 181 B ILE 182 n 48 ILE 182 B THR 183 n 49 THR 183 B GLU 184 n 50 GLU 184 B SER 185 n 51 SER 185 B THR 186 n 52 THR 186 B VAL 187 n 53 VAL 187 B LYS 188 n 54 LYS 188 B VAL 189 n 55 VAL 189 B HIS 190 n 56 HIS 190 B VAL 191 n 57 VAL 191 B LYS 192 n 58 LYS 192 B HIS 193 n 59 HIS 193 B MSE 194 n 60 MSE 194 B LEU 195 n 61 LEU 195 B LYS 196 n 62 LYS 196 B LYS 197 n 63 LYS 197 B MSE 198 n 64 MSE 198 B LYS 199 n 65 LYS 199 B LEU 200 n 66 LEU 200 B LYS 201 n 67 LYS 201 B SER 202 n 68 SER 202 B ARG 203 n 69 ARG 203 B VAL 204 n 70 VAL 204 B GLU 205 n 71 GLU 205 B ALA 206 n 72 ALA 206 B ALA 207 n 73 ALA 207 B VAL 208 n 74 VAL 208 B TRP 209 n 75 TRP 209 B VAL 210 n 76 VAL 210 B HIS 211 n 77 HIS 211 B GLN 212 n 78 GLN 212 B GLU 213 n 79 GLU 213 B ARG 214 n 80 ARG 214 B ILE 215 n 81 ILE 215 B PHE 216 n 82 PHE 216 B n 1 -12 E n 2 -11 E n 3 -10 E n 4 -9 E n 5 -8 E n 6 -7 E n 7 -6 E n 8 -5 E n 9 -4 E n 10 -3 E n 11 -2 E n 12 -1 E n 13 147 E n 14 148 E n 15 149 E GLU 150 n 16 GLU 150 E ARG 151 n 17 ARG 151 E ASP 152 n 18 ASP 152 E VAL 153 n 19 VAL 153 E ASN 154 n 20 ASN 154 E GLN 155 n 21 GLN 155 E LEU 156 n 22 LEU 156 E THR 157 n 23 THR 157 E PRO 158 n 24 PRO 158 E ARG 159 n 25 ARG 159 E GLU 160 n 26 GLU 160 E ARG 161 n 27 ARG 161 E ASP 162 n 28 ASP 162 E ILE 163 n 29 ILE 163 E LEU 164 n 30 LEU 164 E LYS 165 n 31 LYS 165 E LEU 166 n 32 LEU 166 E ILE 167 n 33 ILE 167 E ALA 168 n 34 ALA 168 E GLN 169 n 35 GLN 169 E GLY 170 n 36 GLY 170 E LEU 171 n 37 LEU 171 E PRO 172 n 38 PRO 172 E ASN 173 n 39 ASN 173 E LYS 174 n 40 LYS 174 E MSE 175 n 41 MSE 175 E ILE 176 n 42 ILE 176 E ALA 177 n 43 ALA 177 E ARG 178 n 44 ARG 178 E ARG 179 n 45 ARG 179 E LEU 180 n 46 LEU 180 E ASP 181 n 47 ASP 181 E ILE 182 n 48 ILE 182 E THR 183 n 49 THR 183 E GLU 184 n 50 GLU 184 E SER 185 n 51 SER 185 E THR 186 n 52 THR 186 E VAL 187 n 53 VAL 187 E LYS 188 n 54 LYS 188 E VAL 189 n 55 VAL 189 E HIS 190 n 56 HIS 190 E VAL 191 n 57 VAL 191 E LYS 192 n 58 LYS 192 E HIS 193 n 59 HIS 193 E MSE 194 n 60 MSE 194 E LEU 195 n 61 LEU 195 E LYS 196 n 62 LYS 196 E LYS 197 n 63 LYS 197 E MSE 198 n 64 MSE 198 E LYS 199 n 65 LYS 199 E LEU 200 n 66 LEU 200 E LYS 201 n 67 LYS 201 E SER 202 n 68 SER 202 E ARG 203 n 69 ARG 203 E VAL 204 n 70 VAL 204 E GLU 205 n 71 GLU 205 E ALA 206 n 72 ALA 206 E ALA 207 n 73 ALA 207 E VAL 208 n 74 VAL 208 E TRP 209 n 75 TRP 209 E VAL 210 n 76 VAL 210 E HIS 211 n 77 HIS 211 E GLN 212 n 78 GLN 212 E GLU 213 n 79 GLU 213 E ARG 214 n 80 ARG 214 E ILE 215 n 81 ILE 215 E PHE 216 n 82 PHE 216 E n 1 -12 F n 2 -11 F n 3 -10 F n 4 -9 F n 5 -8 F n 6 -7 F n 7 -6 F n 8 -5 F n 9 -4 F n 10 -3 F n 11 -2 F n 12 -1 F n 13 147 F n 14 148 F n 15 149 F n 16 150 F ARG 151 n 17 ARG 151 F ASP 152 n 18 ASP 152 F VAL 153 n 19 VAL 153 F ASN 154 n 20 ASN 154 F GLN 155 n 21 GLN 155 F LEU 156 n 22 LEU 156 F THR 157 n 23 THR 157 F PRO 158 n 24 PRO 158 F ARG 159 n 25 ARG 159 F GLU 160 n 26 GLU 160 F ARG 161 n 27 ARG 161 F ASP 162 n 28 ASP 162 F ILE 163 n 29 ILE 163 F LEU 164 n 30 LEU 164 F LYS 165 n 31 LYS 165 F LEU 166 n 32 LEU 166 F ILE 167 n 33 ILE 167 F ALA 168 n 34 ALA 168 F GLN 169 n 35 GLN 169 F GLY 170 n 36 GLY 170 F LEU 171 n 37 LEU 171 F PRO 172 n 38 PRO 172 F ASN 173 n 39 ASN 173 F LYS 174 n 40 LYS 174 F MSE 175 n 41 MSE 175 F ILE 176 n 42 ILE 176 F ALA 177 n 43 ALA 177 F ARG 178 n 44 ARG 178 F ARG 179 n 45 ARG 179 F LEU 180 n 46 LEU 180 F ASP 181 n 47 ASP 181 F ILE 182 n 48 ILE 182 F THR 183 n 49 THR 183 F GLU 184 n 50 GLU 184 F SER 185 n 51 SER 185 F THR 186 n 52 THR 186 F VAL 187 n 53 VAL 187 F LYS 188 n 54 LYS 188 F VAL 189 n 55 VAL 189 F HIS 190 n 56 HIS 190 F VAL 191 n 57 VAL 191 F LYS 192 n 58 LYS 192 F HIS 193 n 59 HIS 193 F MSE 194 n 60 MSE 194 F LEU 195 n 61 LEU 195 F LYS 196 n 62 LYS 196 F LYS 197 n 63 LYS 197 F MSE 198 n 64 MSE 198 F LYS 199 n 65 LYS 199 F LEU 200 n 66 LEU 200 F LYS 201 n 67 LYS 201 F SER 202 n 68 SER 202 F ARG 203 n 69 ARG 203 F VAL 204 n 70 VAL 204 F GLU 205 n 71 GLU 205 F ALA 206 n 72 ALA 206 F ALA 207 n 73 ALA 207 F VAL 208 n 74 VAL 208 F TRP 209 n 75 TRP 209 F VAL 210 n 76 VAL 210 F HIS 211 n 77 HIS 211 F GLN 212 n 78 GLN 212 F GLU 213 n 79 GLU 213 F ARG 214 n 80 ARG 214 F ILE 215 n 81 ILE 215 F PHE 216 n 82 PHE 216 F author_defined_assembly 4 tetrameric author_defined_assembly 4 tetrameric A MSE 175 SELENOMETHIONINE E MSE 41 MET A MSE 194 SELENOMETHIONINE E MSE 60 MET A MSE 198 SELENOMETHIONINE E MSE 64 MET B MSE 175 SELENOMETHIONINE F MSE 41 MET B MSE 194 SELENOMETHIONINE F MSE 60 MET B MSE 198 SELENOMETHIONINE F MSE 64 MET E MSE 175 SELENOMETHIONINE G MSE 41 MET E MSE 194 SELENOMETHIONINE G MSE 60 MET E MSE 198 SELENOMETHIONINE G MSE 64 MET F MSE 175 SELENOMETHIONINE H MSE 41 MET F MSE 194 SELENOMETHIONINE H MSE 60 MET F MSE 198 SELENOMETHIONINE H MSE 64 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 F NZ LYS 196 H NZ LYS 62 0 Y 1 A MSE -12 E MSE 1 1 Y 1 A ARG -11 E ARG 2 1 Y 1 A GLY -10 E GLY 3 1 Y 1 A SER -9 E SER 4 1 Y 1 A HIS -8 E HIS 5 1 Y 1 A HIS -7 E HIS 6 1 Y 1 A HIS -6 E HIS 7 1 Y 1 A HIS -5 E HIS 8 1 Y 1 A HIS -4 E HIS 9 1 Y 1 A HIS -3 E HIS 10 1 Y 1 A GLY -2 E GLY 11 1 Y 1 A SER -1 E SER 12 1 Y 1 A ALA 147 E ALA 13 1 Y 1 A THR 148 E THR 14 1 Y 1 A THR 149 E THR 15 1 Y 1 A GLU 150 E GLU 16 1 Y 1 B MSE -12 F MSE 1 1 Y 1 B ARG -11 F ARG 2 1 Y 1 B GLY -10 F GLY 3 1 Y 1 B SER -9 F SER 4 1 Y 1 B HIS -8 F HIS 5 1 Y 1 B HIS -7 F HIS 6 1 Y 1 B HIS -6 F HIS 7 1 Y 1 B HIS -5 F HIS 8 1 Y 1 B HIS -4 F HIS 9 1 Y 1 B HIS -3 F HIS 10 1 Y 1 B GLY -2 F GLY 11 1 Y 1 B SER -1 F SER 12 1 Y 1 B ALA 147 F ALA 13 1 Y 1 B THR 148 F THR 14 1 Y 1 B THR 149 F THR 15 1 Y 1 B GLU 150 F GLU 16 1 Y 1 E MSE -12 G MSE 1 1 Y 1 E ARG -11 G ARG 2 1 Y 1 E GLY -10 G GLY 3 1 Y 1 E SER -9 G SER 4 1 Y 1 E HIS -8 G HIS 5 1 Y 1 E HIS -7 G HIS 6 1 Y 1 E HIS -6 G HIS 7 1 Y 1 E HIS -5 G HIS 8 1 Y 1 E HIS -4 G HIS 9 1 Y 1 E HIS -3 G HIS 10 1 Y 1 E GLY -2 G GLY 11 1 Y 1 E SER -1 G SER 12 1 Y 1 E ALA 147 G ALA 13 1 Y 1 E THR 148 G THR 14 1 Y 1 E THR 149 G THR 15 1 Y 1 F MSE -12 H MSE 1 1 Y 1 F ARG -11 H ARG 2 1 Y 1 F GLY -10 H GLY 3 1 Y 1 F SER -9 H SER 4 1 Y 1 F HIS -8 H HIS 5 1 Y 1 F HIS -7 H HIS 6 1 Y 1 F HIS -6 H HIS 7 1 Y 1 F HIS -5 H HIS 8 1 Y 1 F HIS -4 H HIS 9 1 Y 1 F HIS -3 H HIS 10 1 Y 1 F GLY -2 H GLY 11 1 Y 1 F SER -1 H SER 12 1 Y 1 F ALA 147 H ALA 13 1 Y 1 F THR 148 H THR 14 1 Y 1 F THR 149 H THR 15 1 Y 1 F GLU 150 H GLU 16 1 Y 1 E ASP 152 64.93 103.56 protein_rep.param protein.top dna-rna_rep.param dna_nodihe.top water_rep.param water.top ion.param ion.top 34.6 -8.32 0 0 -10.24 0 18.56 Data collection, processing and initial refinement was in P1. Final refinement was in P21. The model used for MR was built from MAD phasing results from a similar crystal. 0.2730000 0.006 0.2280000 2.12 8.97 1797 36074 36074 5 96.2 random 1 restrained THROUGHOUT 0.0 MOLECULAR REPLACEMENT DNA-Binding Domain of 1RNL bound to DNA Engh & Huber flat model 75.9 0.489 0.35 0.29 5.0 0.27 0.30 2.12 8.97 330 4199 40 1628 2201 1.058 0.007 17.6 1.04 1.276 1.982 1.820 2.564 0.3240000 0.020 0.3140000 2.25 264 5163 6 4.9 87.7 21.5 2.13 100.0 1JE8 69333 69333 0.0 -3.0 0.0480000 1 19.1 2.9 94.0 2.13 2.18 5.2 3610 0.1940000 2.7 73.3 data reduction DENZO data reduction TRUNCATE phasing GLRF refinement CNS 1.0 data scaling CCP4 (TRUNCATE) Two-Component response regulator NarL/DNA Complex: DNA Bending Found in a High Affinity Site 1 N N 1 N N 1 N N 1 N N 2 N N 2 N N 2 N N 2 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N A ASP 152 E ASP 18 HELX_P A LEU 156 E LEU 22 5 1 5 A THR 157 E THR 23 HELX_P A ALA 168 E ALA 34 1 2 12 A PRO 172 E PRO 38 HELX_P A ASP 181 E ASP 47 1 3 10 A THR 183 E THR 49 HELX_P A MSE 198 E MSE 64 1 4 16 A SER 202 E SER 68 HELX_P A GLU 213 E GLU 79 1 5 12 B ASP 152 F ASP 18 HELX_P B LEU 156 F LEU 22 5 6 5 B THR 157 F THR 23 HELX_P B ALA 168 F ALA 34 1 7 12 B PRO 172 F PRO 38 HELX_P B ASP 181 F ASP 47 1 8 10 B THR 183 F THR 49 HELX_P B LYS 199 F LYS 65 1 9 17 B SER 202 F SER 68 HELX_P B GLU 213 F GLU 79 1 10 12 E ASP 152 G ASP 18 HELX_P E LEU 156 G LEU 22 5 11 5 E THR 157 G THR 23 HELX_P E ALA 168 G ALA 34 1 12 12 E PRO 172 G PRO 38 HELX_P E ASP 181 G ASP 47 1 13 10 E THR 183 G THR 49 HELX_P E LYS 199 G LYS 65 1 14 17 E SER 202 G SER 68 HELX_P E GLU 213 G GLU 79 1 15 12 F ASP 152 H ASP 18 HELX_P F LEU 156 H LEU 22 5 16 5 F THR 157 H THR 23 HELX_P F GLN 169 H GLN 35 1 17 13 F PRO 172 H PRO 38 HELX_P F ASP 181 H ASP 47 1 18 10 F THR 183 H THR 49 HELX_P F MSE 198 H MSE 64 1 19 16 F SER 202 H SER 68 HELX_P F GLU 213 H GLU 79 1 20 12 covale 1.331 both A LYS 174 E C LYS 40 1_555 A MSE 175 E N MSE 41 1_555 covale 1.323 both A MSE 175 E C MSE 41 1_555 A ILE 176 E N ILE 42 1_555 covale 1.327 both A HIS 193 E C HIS 59 1_555 A MSE 194 E N MSE 60 1_555 covale 1.329 both A MSE 194 E C MSE 60 1_555 A LEU 195 E N LEU 61 1_555 covale 1.328 both A LYS 197 E C LYS 63 1_555 A MSE 198 E N MSE 64 1_555 covale 1.329 both A MSE 198 E C MSE 64 1_555 A LYS 199 E N LYS 65 1_555 covale 1.329 both B LYS 174 F C LYS 40 1_555 B MSE 175 F N MSE 41 1_555 covale 1.327 both B MSE 175 F C MSE 41 1_555 B ILE 176 F N ILE 42 1_555 covale 1.326 both B HIS 193 F C HIS 59 1_555 B MSE 194 F N MSE 60 1_555 covale 1.326 both B MSE 194 F C MSE 60 1_555 B LEU 195 F N LEU 61 1_555 covale 1.325 both B LYS 197 F C LYS 63 1_555 B MSE 198 F N MSE 64 1_555 covale 1.328 both B MSE 198 F C MSE 64 1_555 B LYS 199 F N LYS 65 1_555 covale 1.331 both E LYS 174 G C LYS 40 1_555 E MSE 175 G N MSE 41 1_555 covale 1.327 both E MSE 175 G C MSE 41 1_555 E ILE 176 G N ILE 42 1_555 covale 1.330 both E HIS 193 G C HIS 59 1_555 E MSE 194 G N MSE 60 1_555 covale 1.323 both E MSE 194 G C MSE 60 1_555 E LEU 195 G N LEU 61 1_555 covale 1.325 both E LYS 197 G C LYS 63 1_555 E MSE 198 G N MSE 64 1_555 covale 1.333 both E MSE 198 G C MSE 64 1_555 E LYS 199 G N LYS 65 1_555 covale 1.328 both F LYS 174 H C LYS 40 1_555 F MSE 175 H N MSE 41 1_555 covale 1.329 both F MSE 175 H C MSE 41 1_555 F ILE 176 H N ILE 42 1_555 covale 1.327 both F HIS 193 H C HIS 59 1_555 F MSE 194 H N MSE 60 1_555 covale 1.326 both F MSE 194 H C MSE 60 1_555 F LEU 195 H N LEU 61 1_555 covale 1.330 both F LYS 197 H C LYS 63 1_555 F MSE 198 H N MSE 64 1_555 covale 1.332 both F MSE 198 H C MSE 64 1_555 F LYS 199 H N LYS 65 1_555 hydrog WATSON-CRICK C DC 1 A N3 DC 1 1_555 D DG 40 B N1 DG 20 1_555 hydrog WATSON-CRICK C DC 1 A N4 DC 1 1_555 D DG 40 B O6 DG 20 1_555 hydrog WATSON-CRICK C DC 1 A O2 DC 1 1_555 D DG 40 B N2 DG 20 1_555 hydrog WATSON-CRICK C DG 2 A N1 DG 2 1_555 D DC 39 B N3 DC 19 1_555 hydrog WATSON-CRICK C DG 2 A N2 DG 2 1_555 D DC 39 B O2 DC 19 1_555 hydrog WATSON-CRICK C DG 2 A O6 DG 2 1_555 D DC 39 B N4 DC 19 1_555 hydrog WATSON-CRICK C DT 3 A N3 DT 3 1_555 D DA 38 B N1 DA 18 1_555 hydrog WATSON-CRICK C DT 3 A O4 DT 3 1_555 D DA 38 B N6 DA 18 1_555 hydrog WATSON-CRICK C DA 4 A N1 DA 4 1_555 D DT 37 B N3 DT 17 1_555 hydrog WATSON-CRICK C DA 4 A N6 DA 4 1_555 D DT 37 B O4 DT 17 1_555 hydrog WATSON-CRICK C DC 5 A N3 DC 5 1_555 D DG 36 B N1 DG 16 1_555 hydrog WATSON-CRICK C DC 5 A N4 DC 5 1_555 D DG 36 B O6 DG 16 1_555 hydrog WATSON-CRICK C DC 5 A O2 DC 5 1_555 D DG 36 B N2 DG 16 1_555 hydrog WATSON-CRICK C DC 6 A N3 DC 6 1_555 D DG 35 B N1 DG 15 1_555 hydrog WATSON-CRICK C DC 6 A N4 DC 6 1_555 D DG 35 B O6 DG 15 1_555 hydrog WATSON-CRICK C DC 6 A O2 DC 6 1_555 D DG 35 B N2 DG 15 1_555 hydrog WATSON-CRICK C DC 7 A N3 DC 7 1_555 D DG 34 B N1 DG 14 1_555 hydrog WATSON-CRICK C DC 7 A N4 DC 7 1_555 D DG 34 B O6 DG 14 1_555 hydrog WATSON-CRICK C DC 7 A O2 DC 7 1_555 D DG 34 B N2 DG 14 1_555 hydrog WATSON-CRICK C DA 8 A N1 DA 8 1_555 D DT 33 B N3 DT 13 1_555 hydrog WATSON-CRICK C DA 8 A N6 DA 8 1_555 D DT 33 B O4 DT 13 1_555 hydrog WATSON-CRICK C DT 9 A N3 DT 9 1_555 D DA 32 B N1 DA 12 1_555 hydrog WATSON-CRICK C DT 9 A O4 DT 9 1_555 D DA 32 B N6 DA 12 1_555 hydrog WATSON-CRICK C DT 10 A N3 DT 10 1_555 D DA 31 B N1 DA 11 1_555 hydrog WATSON-CRICK C DT 10 A O4 DT 10 1_555 D DA 31 B N6 DA 11 1_555 hydrog WATSON-CRICK C DA 11 A N1 DA 11 1_555 D DT 30 B N3 DT 10 1_555 hydrog WATSON-CRICK C DA 11 A N6 DA 11 1_555 D DT 30 B O4 DT 10 1_555 hydrog WATSON-CRICK C DA 12 A N1 DA 12 1_555 D DT 29 B N3 DT 9 1_555 hydrog WATSON-CRICK C DA 12 A N6 DA 12 1_555 D DT 29 B O4 DT 9 1_555 hydrog WATSON-CRICK C DT 13 A N3 DT 13 1_555 D DA 28 B N1 DA 8 1_555 hydrog WATSON-CRICK C DT 13 A O4 DT 13 1_555 D DA 28 B N6 DA 8 1_555 hydrog WATSON-CRICK C DG 14 A N1 DG 14 1_555 D DC 27 B N3 DC 7 1_555 hydrog WATSON-CRICK C DG 14 A N2 DG 14 1_555 D DC 27 B O2 DC 7 1_555 hydrog WATSON-CRICK C DG 14 A O6 DG 14 1_555 D DC 27 B N4 DC 7 1_555 hydrog WATSON-CRICK C DG 15 A N1 DG 15 1_555 D DC 26 B N3 DC 6 1_555 hydrog WATSON-CRICK C DG 15 A N2 DG 15 1_555 D DC 26 B O2 DC 6 1_555 hydrog WATSON-CRICK C DG 15 A O6 DG 15 1_555 D DC 26 B N4 DC 6 1_555 hydrog WATSON-CRICK C DG 16 A N1 DG 16 1_555 D DC 25 B N3 DC 5 1_555 hydrog WATSON-CRICK C DG 16 A N2 DG 16 1_555 D DC 25 B O2 DC 5 1_555 hydrog WATSON-CRICK C DG 16 A O6 DG 16 1_555 D DC 25 B N4 DC 5 1_555 hydrog WATSON-CRICK C DT 17 A N3 DT 17 1_555 D DA 24 B N1 DA 4 1_555 hydrog WATSON-CRICK C DT 17 A O4 DT 17 1_555 D DA 24 B N6 DA 4 1_555 hydrog WATSON-CRICK C DA 18 A N1 DA 18 1_555 D DT 23 B N3 DT 3 1_555 hydrog WATSON-CRICK C DA 18 A N6 DA 18 1_555 D DT 23 B O4 DT 3 1_555 hydrog WATSON-CRICK C DC 19 A N3 DC 19 1_555 D DG 22 B N1 DG 2 1_555 hydrog WATSON-CRICK C DC 19 A N4 DC 19 1_555 D DG 22 B O6 DG 2 1_555 hydrog WATSON-CRICK C DC 19 A O2 DC 19 1_555 D DG 22 B N2 DG 2 1_555 hydrog WATSON-CRICK C DG 20 A N1 DG 20 1_555 D DC 21 B N3 DC 1 1_555 hydrog WATSON-CRICK C DG 20 A N2 DG 20 1_555 D DC 21 B O2 DC 1 1_555 hydrog WATSON-CRICK C DG 20 A O6 DG 20 1_555 D DC 21 B N4 DC 1 1_555 hydrog WATSON-CRICK G DC 1 C N3 DC 1 1_555 H DG 40 D N1 DG 20 1_555 hydrog WATSON-CRICK G DC 1 C N4 DC 1 1_555 H DG 40 D O6 DG 20 1_555 hydrog WATSON-CRICK G DC 1 C O2 DC 1 1_555 H DG 40 D N2 DG 20 1_555 hydrog WATSON-CRICK G DG 2 C N1 DG 2 1_555 H DC 39 D N3 DC 19 1_555 hydrog WATSON-CRICK G DG 2 C N2 DG 2 1_555 H DC 39 D O2 DC 19 1_555 hydrog WATSON-CRICK G DG 2 C O6 DG 2 1_555 H DC 39 D N4 DC 19 1_555 hydrog WATSON-CRICK G DT 3 C N3 DT 3 1_555 H DA 38 D N1 DA 18 1_555 hydrog WATSON-CRICK G DT 3 C O4 DT 3 1_555 H DA 38 D N6 DA 18 1_555 hydrog WATSON-CRICK G DA 4 C N1 DA 4 1_555 H DT 37 D N3 DT 17 1_555 hydrog WATSON-CRICK G DA 4 C N6 DA 4 1_555 H DT 37 D O4 DT 17 1_555 hydrog WATSON-CRICK G DC 5 C N3 DC 5 1_555 H DG 36 D N1 DG 16 1_555 hydrog WATSON-CRICK G DC 5 C N4 DC 5 1_555 H DG 36 D O6 DG 16 1_555 hydrog WATSON-CRICK G DC 5 C O2 DC 5 1_555 H DG 36 D N2 DG 16 1_555 hydrog WATSON-CRICK G DC 6 C N3 DC 6 1_555 H DG 35 D N1 DG 15 1_555 hydrog WATSON-CRICK G DC 6 C N4 DC 6 1_555 H DG 35 D O6 DG 15 1_555 hydrog WATSON-CRICK G DC 6 C O2 DC 6 1_555 H DG 35 D N2 DG 15 1_555 hydrog WATSON-CRICK G DC 7 C N3 DC 7 1_555 H DG 34 D N1 DG 14 1_555 hydrog WATSON-CRICK G DC 7 C N4 DC 7 1_555 H DG 34 D O6 DG 14 1_555 hydrog WATSON-CRICK G DC 7 C O2 DC 7 1_555 H DG 34 D N2 DG 14 1_555 hydrog WATSON-CRICK G DA 8 C N1 DA 8 1_555 H DT 33 D N3 DT 13 1_555 hydrog WATSON-CRICK G DA 8 C N6 DA 8 1_555 H DT 33 D O4 DT 13 1_555 hydrog WATSON-CRICK G DT 9 C N3 DT 9 1_555 H DA 32 D N1 DA 12 1_555 hydrog WATSON-CRICK G DT 9 C O4 DT 9 1_555 H DA 32 D N6 DA 12 1_555 hydrog WATSON-CRICK G DT 10 C N3 DT 10 1_555 H DA 31 D N1 DA 11 1_555 hydrog WATSON-CRICK G DT 10 C O4 DT 10 1_555 H DA 31 D N6 DA 11 1_555 hydrog WATSON-CRICK G DA 11 C N1 DA 11 1_555 H DT 30 D N3 DT 10 1_555 hydrog WATSON-CRICK G DA 11 C N6 DA 11 1_555 H DT 30 D O4 DT 10 1_555 hydrog WATSON-CRICK G DA 12 C N1 DA 12 1_555 H DT 29 D N3 DT 9 1_555 hydrog WATSON-CRICK G DA 12 C N6 DA 12 1_555 H DT 29 D O4 DT 9 1_555 hydrog WATSON-CRICK G DT 13 C N3 DT 13 1_555 H DA 28 D N1 DA 8 1_555 hydrog WATSON-CRICK G DT 13 C O4 DT 13 1_555 H DA 28 D N6 DA 8 1_555 hydrog WATSON-CRICK G DG 14 C N1 DG 14 1_555 H DC 27 D N3 DC 7 1_555 hydrog WATSON-CRICK G DG 14 C N2 DG 14 1_555 H DC 27 D O2 DC 7 1_555 hydrog WATSON-CRICK G DG 14 C O6 DG 14 1_555 H DC 27 D N4 DC 7 1_555 hydrog WATSON-CRICK G DG 15 C N1 DG 15 1_555 H DC 26 D N3 DC 6 1_555 hydrog WATSON-CRICK G DG 15 C N2 DG 15 1_555 H DC 26 D O2 DC 6 1_555 hydrog WATSON-CRICK G DG 15 C O6 DG 15 1_555 H DC 26 D N4 DC 6 1_555 hydrog WATSON-CRICK G DG 16 C N1 DG 16 1_555 H DC 25 D N3 DC 5 1_555 hydrog WATSON-CRICK G DG 16 C N2 DG 16 1_555 H DC 25 D O2 DC 5 1_555 hydrog WATSON-CRICK G DG 16 C O6 DG 16 1_555 H DC 25 D N4 DC 5 1_555 hydrog WATSON-CRICK G DT 17 C N3 DT 17 1_555 H DA 24 D N1 DA 4 1_555 hydrog WATSON-CRICK G DT 17 C O4 DT 17 1_555 H DA 24 D N6 DA 4 1_555 hydrog WATSON-CRICK G DA 18 C N1 DA 18 1_555 H DT 23 D N3 DT 3 1_555 hydrog WATSON-CRICK G DA 18 C N6 DA 18 1_555 H DT 23 D O4 DT 3 1_555 hydrog WATSON-CRICK G DC 19 C N3 DC 19 1_555 H DG 22 D N1 DG 2 1_555 hydrog WATSON-CRICK G DC 19 C N4 DC 19 1_555 H DG 22 D O6 DG 2 1_555 hydrog WATSON-CRICK G DC 19 C O2 DC 19 1_555 H DG 22 D N2 DG 2 1_555 hydrog WATSON-CRICK G DG 20 C N1 DG 20 1_555 H DC 21 D N3 DC 1 1_555 hydrog WATSON-CRICK G DG 20 C N2 DG 20 1_555 H DC 21 D O2 DC 1 1_555 hydrog WATSON-CRICK G DG 20 C O6 DG 20 1_555 H DC 21 D N4 DC 1 1_555 TRANSCRIPTION/DNA Protein-DNA complex, Two-Component response regulator, helix-turn-helix, DNA bending, TRANSCRIPTION-DNA COMPLEX NARL_ECOLI UNP 2 147 P10957 ATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 1JE8 PDB 1 1JE8 147 216 1JE8 147 216 P10957 A 1 13 82 147 216 1JE8 147 216 P10957 B 1 13 82 147 216 1JE8 147 216 P10957 E 1 13 82 147 216 1JE8 147 216 P10957 F 1 13 82 1 20 1JE8 1 20 1JE8 C 2 1 20 21 40 1JE8 21 40 1JE8 D 2 1 20 1 20 1JE8 1 20 1JE8 G 2 1 20 21 40 1JE8 21 40 1JE8 H 2 1 20 1 expression tag MSE -12 1JE8 A P10957 UNP 1 1 expression tag ARG -11 1JE8 A P10957 UNP 2 1 expression tag GLY -10 1JE8 A P10957 UNP 3 1 expression tag SER -9 1JE8 A P10957 UNP 4 1 expression tag HIS -8 1JE8 A P10957 UNP 5 1 expression tag HIS -7 1JE8 A P10957 UNP 6 1 expression tag HIS -6 1JE8 A P10957 UNP 7 1 expression tag HIS -5 1JE8 A P10957 UNP 8 1 expression tag HIS -4 1JE8 A P10957 UNP 9 1 expression tag HIS -3 1JE8 A P10957 UNP 10 1 expression tag GLY -2 1JE8 A P10957 UNP 11 1 expression tag SER -1 1JE8 A P10957 UNP 12 1 MET modified residue MSE 175 1JE8 A P10957 UNP 175 41 1 MET modified residue MSE 194 1JE8 A P10957 UNP 194 60 1 MET modified residue MSE 198 1JE8 A P10957 UNP 198 64 2 expression tag MSE -12 1JE8 B P10957 UNP 1 2 expression tag ARG -11 1JE8 B P10957 UNP 2 2 expression tag GLY -10 1JE8 B P10957 UNP 3 2 expression tag SER -9 1JE8 B P10957 UNP 4 2 expression tag HIS -8 1JE8 B P10957 UNP 5 2 expression tag HIS -7 1JE8 B P10957 UNP 6 2 expression tag HIS -6 1JE8 B P10957 UNP 7 2 expression tag HIS -5 1JE8 B P10957 UNP 8 2 expression tag HIS -4 1JE8 B P10957 UNP 9 2 expression tag HIS -3 1JE8 B P10957 UNP 10 2 expression tag GLY -2 1JE8 B P10957 UNP 11 2 expression tag SER -1 1JE8 B P10957 UNP 12 2 MET modified residue MSE 175 1JE8 B P10957 UNP 175 41 2 MET modified residue MSE 194 1JE8 B P10957 UNP 194 60 2 MET modified residue MSE 198 1JE8 B P10957 UNP 198 64 3 expression tag MSE -12 1JE8 E P10957 UNP 1 3 expression tag ARG -11 1JE8 E P10957 UNP 2 3 expression tag GLY -10 1JE8 E P10957 UNP 3 3 expression tag SER -9 1JE8 E P10957 UNP 4 3 expression tag HIS -8 1JE8 E P10957 UNP 5 3 expression tag HIS -7 1JE8 E P10957 UNP 6 3 expression tag HIS -6 1JE8 E P10957 UNP 7 3 expression tag HIS -5 1JE8 E P10957 UNP 8 3 expression tag HIS -4 1JE8 E P10957 UNP 9 3 expression tag HIS -3 1JE8 E P10957 UNP 10 3 expression tag GLY -2 1JE8 E P10957 UNP 11 3 expression tag SER -1 1JE8 E P10957 UNP 12 3 MET modified residue MSE 175 1JE8 E P10957 UNP 175 41 3 MET modified residue MSE 194 1JE8 E P10957 UNP 194 60 3 MET modified residue MSE 198 1JE8 E P10957 UNP 198 64 4 expression tag MSE -12 1JE8 F P10957 UNP 1 4 expression tag ARG -11 1JE8 F P10957 UNP 2 4 expression tag GLY -10 1JE8 F P10957 UNP 3 4 expression tag SER -9 1JE8 F P10957 UNP 4 4 expression tag HIS -8 1JE8 F P10957 UNP 5 4 expression tag HIS -7 1JE8 F P10957 UNP 6 4 expression tag HIS -6 1JE8 F P10957 UNP 7 4 expression tag HIS -5 1JE8 F P10957 UNP 8 4 expression tag HIS -4 1JE8 F P10957 UNP 9 4 expression tag HIS -3 1JE8 F P10957 UNP 10 4 expression tag GLY -2 1JE8 F P10957 UNP 11 4 expression tag SER -1 1JE8 F P10957 UNP 12 4 MET modified residue MSE 175 1JE8 F P10957 UNP 175 41 4 MET modified residue MSE 194 1JE8 F P10957 UNP 194 60 4 MET modified residue MSE 198 1JE8 F P10957 UNP 198 64 BINDING SITE FOR RESIDUE SO4 A 401 A SO4 401 Software 9 BINDING SITE FOR RESIDUE SO4 B 402 B SO4 402 Software 9 BINDING SITE FOR RESIDUE SO4 E 403 E SO4 403 Software 10 BINDING SITE FOR RESIDUE SO4 F 404 F SO4 404 Software 10 BINDING SITE FOR RESIDUE SO4 A 405 A SO4 405 Software 2 BINDING SITE FOR RESIDUE SO4 B 406 B SO4 406 Software 1 BINDING SITE FOR RESIDUE SO4 E 407 E SO4 407 Software 2 BINDING SITE FOR RESIDUE SO4 F 408 F SO4 408 Software 2 A SER 185 E SER 51 9 1_555 A LYS 188 E LYS 54 9 1_555 A HOH 408 U HOH 9 1_555 A HOH 411 U HOH 9 1_555 A HOH 423 U HOH 9 1_555 C HOH 25 Q HOH 9 1_555 C HOH 33 Q HOH 9 1_555 D DC 26 B DC 6 9 1_555 D HOH 61 R HOH 9 1_555 B SER 185 F SER 51 9 1_555 B HOH 414 V HOH 9 1_555 B HOH 418 V HOH 9 1_555 B HOH 420 V HOH 9 1_555 B HOH 421 V HOH 9 1_555 C DC 6 A DC 6 9 1_555 C HOH 42 Q HOH 9 1_555 D HOH 45 R HOH 9 1_555 D HOH 52 R HOH 9 1_555 E SER 185 G SER 51 10 1_555 E LYS 188 G LYS 54 10 1_555 E HOH 413 W HOH 10 1_555 E HOH 419 W HOH 10 1_555 E HOH 423 W HOH 10 1_555 E HOH 424 W HOH 10 1_555 G HOH 29 S HOH 10 1_555 G HOH 31 S HOH 10 1_555 H DC 26 D DC 6 10 1_555 H HOH 60 T HOH 10 1_555 F SER 185 H SER 51 10 1_555 F LYS 188 H LYS 54 10 1_555 F HOH 414 X HOH 10 1_555 F HOH 424 X HOH 10 1_555 F HOH 436 X HOH 10 1_555 G DC 5 C DC 5 10 1_555 G DC 6 C DC 6 10 1_555 G HOH 45 S HOH 10 1_555 H HOH 46 T HOH 10 1_555 H HOH 58 T HOH 10 1_555 A PRO 158 E PRO 24 2 1_555 A ARG 161 E ARG 27 2 1_555 B ARG 161 F ARG 27 1 1_555 E PRO 158 G PRO 24 2 1_555 E ARG 161 G ARG 27 2 1_555 F PRO 158 H PRO 24 2 1_555 F ARG 161 H ARG 27 2 1_555 4 P 1 21 1