0.016410
0.000000
0.005846
0.000000
0.030303
0.000000
0.000000
0.000000
0.026044
0.00000
0.00000
0.00000
Park, H.J.
Yang, C.
Treff, N.
Satterlee, J.D.
Kang, C.H.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90
109.61
90
60.94
33.00
40.76
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C34 H32 Fe N4 O4
616.487
PROTOPORPHYRIN IX CONTAINING FE
HEME
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
C
N
138
N
C
N
139
N
C
N
140
N
C
Y
141
N
C
Y
142
N
C
Y
143
N
C
Y
144
N
C
N
145
N
C
N
146
N
C
N
147
N
C
N
148
N
C
N
149
N
O
N
150
N
O
N
151
N
C
N
152
N
C
N
153
N
C
N
154
N
C
N
155
N
C
N
156
N
C
N
157
N
C
Y
158
N
C
Y
159
N
C
Y
160
N
C
Y
161
N
C
N
162
N
C
N
163
N
C
N
164
N
C
N
165
N
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
C
N
170
N
C
N
171
N
C
N
172
N
C
N
173
N
O
N
174
N
O
Y
175
N
N
N
176
N
N
Y
177
N
N
N
178
N
N
N
179
N
FE
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
N
N
213
S
C
N
214
N
C
N
215
N
O
N
216
N
C
Y
217
N
C
Y
218
N
N
Y
219
N
C
Y
220
N
C
Y
221
N
N
N
222
N
O
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
O
N
234
N
H
N
235
N
H
N
236
N
N
N
237
S
C
N
238
N
C
N
239
N
O
N
240
S
C
N
241
N
C
N
242
N
C
N
243
N
C
N
244
N
O
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
N
N
259
S
C
N
260
N
C
N
261
N
O
N
262
N
C
N
263
N
C
N
264
N
C
N
265
N
C
N
266
N
O
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
N
N
281
S
C
N
282
N
C
N
283
N
O
N
284
N
C
N
285
N
C
N
286
N
C
N
287
N
C
N
288
N
N
N
289
N
O
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
N
N
306
S
C
N
307
N
C
N
308
N
O
N
309
N
C
N
310
N
C
N
311
N
S
N
312
N
C
N
313
N
O
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
N
N
326
S
C
N
327
N
C
N
328
N
O
N
329
N
C
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
Y
335
N
C
N
336
N
O
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
N
353
N
C
N
354
N
C
N
355
N
O
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
N
N
366
S
C
N
367
N
C
N
368
N
O
N
369
N
C
N
370
N
O
N
371
N
O
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
N
N
380
S
C
N
381
N
C
N
382
N
O
N
383
R
C
N
384
N
O
N
385
N
C
N
386
N
O
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
N
N
397
S
C
N
398
N
C
N
399
N
O
N
400
N
C
Y
401
N
C
Y
402
N
C
Y
403
N
C
Y
404
N
N
Y
405
N
C
Y
406
N
C
Y
407
N
C
Y
408
N
C
Y
409
N
C
N
410
N
O
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
N
N
424
S
C
N
425
N
C
N
426
N
O
N
427
N
C
Y
428
N
C
Y
429
N
C
Y
430
N
C
Y
431
N
C
Y
432
N
C
Y
433
N
C
N
434
N
O
N
435
N
O
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
N
N
448
S
C
N
449
N
C
N
450
N
O
N
451
N
C
N
452
N
C
N
453
N
C
N
454
N
O
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
doub
N
131
N
sing
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
sing
N
136
N
doub
N
137
N
sing
N
138
N
doub
N
139
N
sing
N
140
N
sing
Y
141
N
doub
Y
142
N
sing
Y
143
N
sing
N
144
N
sing
Y
145
N
doub
N
146
N
sing
Y
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
doub
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
doub
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
doub
N
170
N
sing
N
171
N
sing
N
172
N
sing
Y
173
N
sing
Y
174
N
sing
Y
175
N
doub
N
176
N
sing
Y
177
N
sing
N
178
N
sing
Y
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
doub
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
doub
N
189
N
doub
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
doub
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
doub
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
Y
222
N
sing
Y
223
N
doub
Y
224
N
doub
N
225
N
sing
Y
226
N
sing
N
227
N
sing
Y
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
doub
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
doub
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
doub
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
doub
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
doub
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
Y
330
N
doub
Y
331
N
sing
Y
332
N
sing
N
333
N
sing
Y
334
N
doub
N
335
N
sing
Y
336
N
doub
N
337
N
sing
Y
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
doub
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
doub
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
doub
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
doub
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
Y
399
N
doub
Y
400
N
sing
Y
401
N
sing
N
402
N
sing
Y
403
N
doub
Y
404
N
sing
Y
405
N
sing
N
406
N
sing
Y
407
N
sing
Y
408
N
doub
N
409
N
sing
Y
410
N
doub
N
411
N
sing
Y
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
doub
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
Y
427
N
doub
Y
428
N
sing
Y
429
N
sing
N
430
N
sing
Y
431
N
doub
N
432
N
sing
Y
433
N
doub
N
434
N
sing
Y
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
doub
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
US
Proteins
PSFGEY
0867
0887-3585
49
49
60
10.1002/prot.10199
12211015
Crystal Structures of Unligated and CN-Ligated Glycera dibranchiata Monomer
Ferric Hemoglobin Components III and IV
2002
10.2210/pdb1jf4/pdb
pdb_00001jf4
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
277
1
mirror
IMAGE PLATE
2000-03-07
RIGAKU RAXIS IIC
YALE MIRRORS
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU
15049.072
monomer hemoglobin component IV
1
nat
polymer
616.487
PROTOPORPHYRIN IX CONTAINING FE
1
syn
non-polymer
18.015
water
75
nat
water
GMH4
no
no
GLSAAQRQVVASTWKDIAGSDNGAGVGKECFTKFLSAHHDMAAVFGFSGASDPGVADLGAKVLAQIGVAVSHLGDEGKMV
AEMKAVGVRHKGYGNKHIKAEYFEPLGASLLSAMEHRIGGKMNAAAKDAWAAAYADISGALISGLQS
GLSAAQRQVVASTWKDIAGSDNGAGVGKECFTKFLSAHHDMAAVFGFSGASDPGVADLGAKVLAQIGVAVSHLGDEGKMV
AEMKAVGVRHKGYGNKHIKAEYFEPLGASLLSAMEHRIGGKMNAAAKDAWAAAYADISGALISGLQS
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Glycera
sample
6350
Glycera dibranchiata
1
2.57
52.05
VAPOR DIFFUSION, HANGING DROP
4.6
PEG 4000, sodium acetate, ammonium sulfate, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 277K
277
chem_comp_atom
chem_comp_bond
database_2
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2002-06-20
1
1
2008-04-27
1
2
2011-07-13
1
3
2024-02-07
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Crystal Structure Of Component III Glycera Dibranchiata Monomeric Hemoglobin
RCSB
Y
RCSB
2001-06-20
REL
HEM
PROTOPORPHYRIN IX CONTAINING FE
HOH
water
HEM
148
2
HEM
HEM
148
A
HOH
201
3
HOH
HOH
201
A
HOH
202
3
HOH
HOH
202
A
HOH
203
3
HOH
HOH
203
A
HOH
204
3
HOH
HOH
204
A
HOH
205
3
HOH
HOH
205
A
HOH
206
3
HOH
HOH
206
A
HOH
207
3
HOH
HOH
207
A
HOH
208
3
HOH
HOH
208
A
HOH
209
3
HOH
HOH
209
A
HOH
210
3
HOH
HOH
210
A
HOH
211
3
HOH
HOH
211
A
HOH
212
3
HOH
HOH
212
A
HOH
213
3
HOH
HOH
213
A
HOH
214
3
HOH
HOH
214
A
HOH
215
3
HOH
HOH
215
A
HOH
216
3
HOH
HOH
216
A
HOH
217
3
HOH
HOH
217
A
HOH
218
3
HOH
HOH
218
A
HOH
219
3
HOH
HOH
219
A
HOH
220
3
HOH
HOH
220
A
HOH
221
3
HOH
HOH
221
A
HOH
222
3
HOH
HOH
222
A
HOH
223
3
HOH
HOH
223
A
HOH
224
3
HOH
HOH
224
A
HOH
225
3
HOH
HOH
225
A
HOH
226
3
HOH
HOH
226
A
HOH
227
3
HOH
HOH
227
A
HOH
228
3
HOH
HOH
228
A
HOH
229
3
HOH
HOH
229
A
HOH
230
3
HOH
HOH
230
A
HOH
231
3
HOH
HOH
231
A
HOH
232
3
HOH
HOH
232
A
HOH
233
3
HOH
HOH
233
A
HOH
234
3
HOH
HOH
234
A
HOH
235
3
HOH
HOH
235
A
HOH
236
3
HOH
HOH
236
A
HOH
237
3
HOH
HOH
237
A
HOH
238
3
HOH
HOH
238
A
HOH
239
3
HOH
HOH
239
A
HOH
240
3
HOH
HOH
240
A
HOH
241
3
HOH
HOH
241
A
HOH
242
3
HOH
HOH
242
A
HOH
243
3
HOH
HOH
243
A
HOH
244
3
HOH
HOH
244
A
HOH
245
3
HOH
HOH
245
A
HOH
246
3
HOH
HOH
246
A
HOH
247
3
HOH
HOH
247
A
HOH
248
3
HOH
HOH
248
A
HOH
249
3
HOH
HOH
249
A
HOH
250
3
HOH
HOH
250
A
HOH
251
3
HOH
HOH
251
A
HOH
252
3
HOH
HOH
252
A
HOH
253
3
HOH
HOH
253
A
HOH
254
3
HOH
HOH
254
A
HOH
255
3
HOH
HOH
255
A
HOH
256
3
HOH
HOH
256
A
HOH
257
3
HOH
HOH
257
A
HOH
258
3
HOH
HOH
258
A
HOH
259
3
HOH
HOH
259
A
HOH
260
3
HOH
HOH
260
A
HOH
261
3
HOH
HOH
261
A
HOH
262
3
HOH
HOH
262
A
HOH
263
3
HOH
HOH
263
A
HOH
264
3
HOH
HOH
264
A
HOH
265
3
HOH
HOH
265
A
HOH
266
3
HOH
HOH
266
A
HOH
267
3
HOH
HOH
267
A
HOH
268
3
HOH
HOH
268
A
HOH
269
3
HOH
HOH
269
A
HOH
270
3
HOH
HOH
270
A
HOH
271
3
HOH
HOH
271
A
HOH
272
3
HOH
HOH
272
A
HOH
273
3
HOH
HOH
273
A
HOH
274
3
HOH
HOH
274
A
HOH
275
3
HOH
HOH
275
A
GLY
1
n
1
GLY
1
A
LEU
2
n
2
LEU
2
A
SER
3
n
3
SER
3
A
ALA
4
n
4
ALA
4
A
ALA
5
n
5
ALA
5
A
GLN
6
n
6
GLN
6
A
ARG
7
n
7
ARG
7
A
GLN
8
n
8
GLN
8
A
VAL
9
n
9
VAL
9
A
VAL
10
n
10
VAL
10
A
ALA
11
n
11
ALA
11
A
SER
12
n
12
SER
12
A
THR
13
n
13
THR
13
A
TRP
14
n
14
TRP
14
A
LYS
15
n
15
LYS
15
A
ASP
16
n
16
ASP
16
A
ILE
17
n
17
ILE
17
A
ALA
18
n
18
ALA
18
A
GLY
19
n
19
GLY
19
A
SER
20
n
20
SER
20
A
ASP
21
n
21
ASP
21
A
ASN
22
n
22
ASN
22
A
GLY
23
n
23
GLY
23
A
ALA
24
n
24
ALA
24
A
GLY
25
n
25
GLY
25
A
VAL
26
n
26
VAL
26
A
GLY
27
n
27
GLY
27
A
LYS
28
n
28
LYS
28
A
GLU
29
n
29
GLU
29
A
CYS
30
n
30
CYS
30
A
PHE
31
n
31
PHE
31
A
THR
32
n
32
THR
32
A
LYS
33
n
33
LYS
33
A
PHE
34
n
34
PHE
34
A
LEU
35
n
35
LEU
35
A
SER
36
n
36
SER
36
A
ALA
37
n
37
ALA
37
A
HIS
38
n
38
HIS
38
A
HIS
39
n
39
HIS
39
A
ASP
40
n
40
ASP
40
A
MET
41
n
41
MET
41
A
ALA
42
n
42
ALA
42
A
ALA
43
n
43
ALA
43
A
VAL
44
n
44
VAL
44
A
PHE
45
n
45
PHE
45
A
GLY
46
n
46
GLY
46
A
PHE
47
n
47
PHE
47
A
SER
48
n
48
SER
48
A
GLY
49
n
49
GLY
49
A
ALA
50
n
50
ALA
50
A
SER
51
n
51
SER
51
A
ASP
52
n
52
ASP
52
A
PRO
53
n
53
PRO
53
A
GLY
54
n
54
GLY
54
A
VAL
55
n
55
VAL
55
A
ALA
56
n
56
ALA
56
A
ASP
57
n
57
ASP
57
A
LEU
58
n
58
LEU
58
A
GLY
59
n
59
GLY
59
A
ALA
60
n
60
ALA
60
A
LYS
61
n
61
LYS
61
A
VAL
62
n
62
VAL
62
A
LEU
63
n
63
LEU
63
A
ALA
64
n
64
ALA
64
A
GLN
65
n
65
GLN
65
A
ILE
66
n
66
ILE
66
A
GLY
67
n
67
GLY
67
A
VAL
68
n
68
VAL
68
A
ALA
69
n
69
ALA
69
A
VAL
70
n
70
VAL
70
A
SER
71
n
71
SER
71
A
HIS
72
n
72
HIS
72
A
LEU
73
n
73
LEU
73
A
GLY
74
n
74
GLY
74
A
ASP
75
n
75
ASP
75
A
GLU
76
n
76
GLU
76
A
GLY
77
n
77
GLY
77
A
LYS
78
n
78
LYS
78
A
MET
79
n
79
MET
79
A
VAL
80
n
80
VAL
80
A
ALA
81
n
81
ALA
81
A
GLU
82
n
82
GLU
82
A
MET
83
n
83
MET
83
A
LYS
84
n
84
LYS
84
A
ALA
85
n
85
ALA
85
A
VAL
86
n
86
VAL
86
A
GLY
87
n
87
GLY
87
A
VAL
88
n
88
VAL
88
A
ARG
89
n
89
ARG
89
A
HIS
90
n
90
HIS
90
A
LYS
91
n
91
LYS
91
A
GLY
92
n
92
GLY
92
A
TYR
93
n
93
TYR
93
A
GLY
94
n
94
GLY
94
A
ASN
95
n
95
ASN
95
A
LYS
96
n
96
LYS
96
A
HIS
97
n
97
HIS
97
A
ILE
98
n
98
ILE
98
A
LYS
99
n
99
LYS
99
A
ALA
100
n
100
ALA
100
A
GLU
101
n
101
GLU
101
A
TYR
102
n
102
TYR
102
A
PHE
103
n
103
PHE
103
A
GLU
104
n
104
GLU
104
A
PRO
105
n
105
PRO
105
A
LEU
106
n
106
LEU
106
A
GLY
107
n
107
GLY
107
A
ALA
108
n
108
ALA
108
A
SER
109
n
109
SER
109
A
LEU
110
n
110
LEU
110
A
LEU
111
n
111
LEU
111
A
SER
112
n
112
SER
112
A
ALA
113
n
113
ALA
113
A
MET
114
n
114
MET
114
A
GLU
115
n
115
GLU
115
A
HIS
116
n
116
HIS
116
A
ARG
117
n
117
ARG
117
A
ILE
118
n
118
ILE
118
A
GLY
119
n
119
GLY
119
A
GLY
120
n
120
GLY
120
A
LYS
121
n
121
LYS
121
A
MET
122
n
122
MET
122
A
ASN
123
n
123
ASN
123
A
ALA
124
n
124
ALA
124
A
ALA
125
n
125
ALA
125
A
ALA
126
n
126
ALA
126
A
LYS
127
n
127
LYS
127
A
ASP
128
n
128
ASP
128
A
ALA
129
n
129
ALA
129
A
TRP
130
n
130
TRP
130
A
ALA
131
n
131
ALA
131
A
ALA
132
n
132
ALA
132
A
ALA
133
n
133
ALA
133
A
TYR
134
n
134
TYR
134
A
ALA
135
n
135
ALA
135
A
ASP
136
n
136
ASP
136
A
ILE
137
n
137
ILE
137
A
SER
138
n
138
SER
138
A
GLY
139
n
139
GLY
139
A
ALA
140
n
140
ALA
140
A
LEU
141
n
141
LEU
141
A
ILE
142
n
142
ILE
142
A
SER
143
n
143
SER
143
A
GLY
144
n
144
GLY
144
A
LEU
145
n
145
LEU
145
A
GLN
146
n
146
GLN
146
A
SER
147
n
147
SER
147
A
author_defined_assembly
1
monomeric
A
HIS
90
A
NE2
HIS
90
1_555
A
HEM
148
B
FE
HEM
1_555
A
HEM
148
B
NA
HEM
1_555
94.2
A
HIS
90
A
NE2
HIS
90
1_555
A
HEM
148
B
FE
HEM
1_555
A
HEM
148
B
NB
HEM
1_555
99.6
A
HEM
148
B
NA
HEM
1_555
A
HEM
148
B
FE
HEM
1_555
A
HEM
148
B
NB
HEM
1_555
89.3
A
HIS
90
A
NE2
HIS
90
1_555
A
HEM
148
B
FE
HEM
1_555
A
HEM
148
B
NC
HEM
1_555
101.1
A
HEM
148
B
NA
HEM
1_555
A
HEM
148
B
FE
HEM
1_555
A
HEM
148
B
NC
HEM
1_555
164.6
A
HEM
148
B
NB
HEM
1_555
A
HEM
148
B
FE
HEM
1_555
A
HEM
148
B
NC
HEM
1_555
89.5
A
HIS
90
A
NE2
HIS
90
1_555
A
HEM
148
B
FE
HEM
1_555
A
HEM
148
B
ND
HEM
1_555
91.2
A
HEM
148
B
NA
HEM
1_555
A
HEM
148
B
FE
HEM
1_555
A
HEM
148
B
ND
HEM
1_555
89.9
A
HEM
148
B
NB
HEM
1_555
A
HEM
148
B
FE
HEM
1_555
A
HEM
148
B
ND
HEM
1_555
169.2
A
HEM
148
B
NC
HEM
1_555
A
HEM
148
B
FE
HEM
1_555
A
HEM
148
B
ND
HEM
1_555
88.4
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
5.91
0.80
106.30
112.21
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
14
14
14
N
1
-6.11
0.80
107.30
101.19
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
14
14
14
N
1
5.40
0.80
106.30
111.70
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
130
130
130
N
1
-5.55
0.80
107.30
101.75
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
130
130
130
N
1
A
A
NE2
CD2
HIS
HIS
38
38
-0.069
0.011
1.373
1.304
N
1
A
A
NE2
CD2
HIS
HIS
39
39
-0.069
0.011
1.373
1.304
N
1
A
A
NE2
CD2
HIS
HIS
72
72
-0.070
0.011
1.373
1.303
N
1
A
A
NE2
CD2
HIS
HIS
97
97
-0.073
0.011
1.373
1.300
N
1
A
A
NE2
CD2
HIS
HIS
116
116
-0.069
0.011
1.373
1.304
N
1
A
LEU
2
74.82
117.96
1
A
LYS
96
-83.02
38.06
0.2130000
0.1890000
1.4
10
1602
11464
11172
14.3
RANDOM
1
2.0
2.0
MOLECULAR REPLACEMENT
1.4
10
75
1174
43
0
1056
0.010
2.255
1.4
30
1JF4
12323
11627
2.0
2.0
0.0490000
1
3.5
94.4
1.4
30
3.5
90
data reduction
DENZO
data scaling
SCALEPACK
model building
X-PLOR
refinement
X-PLOR
3.851
phasing
X-PLOR
Crystal Structure Of Component IV Glycera Dibranchiata Monomeric Hemoglobin
1
N
N
2
N
N
3
N
N
A
SER
3
A
SER
3
HELX_P
A
GLY
19
A
GLY
19
1
1
17
A
GLY
23
A
GLY
23
HELX_P
A
HIS
38
A
HIS
38
1
2
16
A
MET
41
A
MET
41
HELX_P
A
GLY
46
A
GLY
46
1
3
6
A
PRO
53
A
PRO
53
HELX_P
A
HIS
72
A
HIS
72
1
4
20
A
ASP
75
A
ASP
75
HELX_P
A
HIS
90
A
HIS
90
1
5
16
A
LYS
91
A
LYS
91
HELX_P
A
TYR
93
A
TYR
93
5
6
3
A
LYS
99
A
LYS
99
HELX_P
A
GLU
101
A
GLU
101
5
7
3
A
TYR
102
A
TYR
102
HELX_P
A
GLY
119
A
GLY
119
1
8
18
A
GLY
120
A
GLY
120
HELX_P
A
MET
122
A
MET
122
5
9
3
A
ASN
123
A
ASN
123
HELX_P
A
GLN
146
A
GLN
146
1
10
24
metalc
2.268
A
HIS
90
A
NE2
HIS
90
1_555
A
HEM
148
B
FE
HEM
1_555
OXYGEN STORAGE/TRANSPORT
Glycera, monomer hemoglobin, OXYGEN STORAGE-TRANSPORT COMPLEX
GLB4_GLYDI
UNP
1
1
P15447
GLSAAQRQVVASTWKDIAGSDNGAGVGKECFTKFLSAHHDMAAVFGFSGASDPGVADLGAKVLAQIGVAVSHLGDEGKMV
AEMKAVGVRHKGYGNKHIKAEYFEPLGASLLSAMEHRIGGKMNAAAKDAWAAAYADISGALISGLQS
1
147
1JF4
1
147
P15447
A
1
1
147
BINDING SITE FOR RESIDUE HEM A 148
A
HEM
148
Software
11
A
PHE
45
A
PHE
45
11
1_555
A
LEU
58
A
LEU
58
11
1_555
A
LYS
61
A
LYS
61
11
1_555
A
VAL
62
A
VAL
62
11
1_555
A
GLN
65
A
GLN
65
11
1_555
A
ARG
89
A
ARG
89
11
1_555
A
HIS
90
A
HIS
90
11
1_555
A
TYR
93
A
TYR
93
11
1_555
A
GLY
94
A
GLY
94
11
1_555
A
PHE
103
A
PHE
103
11
1_555
A
LEU
141
A
LEU
141
11
1_555
4
P 1 21 1