0.013041 0.000000 0.000000 0.000000 0.008398 0.000000 0.000000 0.000000 0.006448 0.000000 0.000000 0.000000 Kamada, K. Shu, F. Chen, H. Malik, S. Stelzer, G. Roeder, R.G. Meisterernst, M. 0000-0002-2487-9713 Burley, S.K. New York SGX Research Center for Structural Genomics (NYSGXRC) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 76.684 119.075 155.076 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N O N 89 N P N 90 N O N 91 N O N 92 N O N 93 N C N 94 R C N 95 N O N 96 S C N 97 N O N 98 N C N 99 R C Y 100 N N Y 101 N C Y 102 N N Y 103 N C Y 104 N C N 105 N N Y 106 N N Y 107 N C Y 108 N N Y 109 N C N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N O N 125 N P N 126 N O N 127 N O N 128 N O N 129 N C N 130 R C N 131 N O N 132 S C N 133 N O N 134 N C N 135 R C N 136 N N N 137 N C N 138 N O N 139 N N N 140 N C N 141 N N N 142 N C N 143 N C N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N P N 160 N O N 161 N O N 162 N O N 163 N C N 164 R C N 165 N O N 166 S C N 167 N O N 168 N C N 169 R C Y 170 N N Y 171 N C Y 172 N N Y 173 N C N 174 N C N 175 N O N 176 N N N 177 N C N 178 N N N 179 N N Y 180 N C N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N O N 196 N P N 197 N O N 198 N O N 199 N O N 200 N C N 201 R C N 202 N O N 203 S C N 204 N O N 205 N C N 206 R C N 207 N N N 208 N C N 209 N O N 210 N N N 211 N C N 212 N O N 213 N C N 214 N C N 215 N C N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N N N 232 S C N 233 N C N 234 N O N 235 N C N 236 N C N 237 N C N 238 N O N 239 N N N 240 N O N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N N N 252 S C N 253 N C N 254 N O N 255 N C N 256 N C N 257 N C N 258 N O N 259 N O N 260 N O N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N N N 271 N C N 272 N C N 273 N O N 274 N O N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N N N 281 S C N 282 N C N 283 N O N 284 N C Y 285 N C Y 286 N N Y 287 N C Y 288 N C Y 289 N N N 290 N O N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N O N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 S C N 309 N C N 310 N C N 311 N C N 312 N O N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N N N 327 S C N 328 N C N 329 N O N 330 N C N 331 N C N 332 N C N 333 N C N 334 N O N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C N 353 N C N 354 N C N 355 N C N 356 N N N 357 N O N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N N N 374 S C N 375 N C N 376 N O N 377 N C N 378 N C N 379 N S N 380 N C N 381 N O N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N N N 394 S C N 395 N C N 396 N O N 397 N C Y 398 N C Y 399 N C Y 400 N C Y 401 N C Y 402 N C Y 403 N C N 404 N O N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N N N 417 S C N 418 N C N 419 N O N 420 N C N 421 N C N 422 N C N 423 N O N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N N N 434 S C N 435 N C N 436 N O N 437 N C N 438 N O N 439 N O N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N N N 448 S C N 449 N C N 450 N O N 451 R C N 452 N O N 453 N C N 454 N O N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N N N 465 S C N 466 N C N 467 N O N 468 N C Y 469 N C Y 470 N C Y 471 N C Y 472 N N Y 473 N C Y 474 N C Y 475 N C Y 476 N C Y 477 N C N 478 N O N 479 N H N 480 N H N 481 N H N 482 N H N 483 N H N 484 N H N 485 N H N 486 N H N 487 N H N 488 N H N 489 N H N 490 N H N 491 N N N 492 S C N 493 N C N 494 N O N 495 N C Y 496 N C Y 497 N C Y 498 N C Y 499 N C Y 500 N C Y 501 N C N 502 N O N 503 N O N 504 N H N 505 N H N 506 N H N 507 N H N 508 N H N 509 N H N 510 N H N 511 N H N 512 N H N 513 N H N 514 N H N 515 N N N 516 S C N 517 N C N 518 N O N 519 N C N 520 N C N 521 N C N 522 N O N 523 N H N 524 N H N 525 N H N 526 N H N 527 N H N 528 N H N 529 N H N 530 N H N 531 N H N 532 N H N 533 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing Y 106 N sing Y 107 N sing Y 108 N doub N 109 N sing Y 110 N sing Y 111 N sing Y 112 N doub N 113 N sing Y 114 N doub N 115 N sing N 116 N sing Y 117 N sing Y 118 N doub N 119 N sing Y 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N doub N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing Y 179 N sing Y 180 N sing Y 181 N doub N 182 N sing Y 183 N sing N 184 N sing Y 185 N doub N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N doub N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N doub N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N doub N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N doub N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N doub N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N doub N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N doub N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N doub N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N doub N 285 N sing N 286 N sing N 287 N sing N 288 N sing Y 289 N sing Y 290 N doub Y 291 N doub N 292 N sing Y 293 N sing N 294 N sing Y 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N doub N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N doub N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N doub N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N doub N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N doub N 393 N sing N 394 N sing N 395 N sing N 396 N sing Y 397 N doub Y 398 N sing Y 399 N sing N 400 N sing Y 401 N doub N 402 N sing Y 403 N doub N 404 N sing Y 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N doub N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N doub N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N doub N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N doub N 462 N sing N 463 N sing N 464 N sing N 465 N sing Y 466 N doub Y 467 N sing Y 468 N sing N 469 N sing Y 470 N doub Y 471 N sing Y 472 N sing N 473 N sing Y 474 N sing Y 475 N doub N 476 N sing Y 477 N doub N 478 N sing Y 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N doub N 490 N sing N 491 N sing N 492 N sing N 493 N sing Y 494 N doub Y 495 N sing Y 496 N sing N 497 N sing Y 498 N doub N 499 N sing Y 500 N doub N 501 N sing Y 502 N sing N 503 N sing N 504 N sing N 505 N sing N 506 N sing N 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N sing N 512 N sing N 513 N doub N 514 N sing N 515 N sing N 516 N sing N 517 N sing N 518 N sing N 519 N sing N 520 N sing N 521 N sing N 522 N sing N 523 N sing N 524 N sing US Cell(Cambridge,Mass.) CELLB5 0998 0092-8674 106 71 81 10.1016/S0092-8674(01)00417-2 11461703 Crystal structure of negative cofactor 2 recognizing the TBP-DNA transcription complex. 2001 0000-0002-2487-9713 10.2210/pdb1jfi/pdb pdb_00001jfi 100 1 VERTICAL FOCUSING MIRROR CCD 2000-07-02 SBC-2 ROSENBAUM-ROCK MONOCHROMATOR SINGLE WAVELENGTH M x-ray 1 0.98400 1.0 19-ID APS 0.98400 SYNCHROTRON APS BEAMLINE 19-ID 19 BASE-PAIR TATA-CONTAINING OLIGONUCLEOTIDE TOP STRAND 5844.796 5'-D(*TP*TP*GP*GP*CP*TP*AP*TP*AP*AP*AP*AP*GP*GP*GP*CP*TP*CP*C)-3' 1 syn polymer 19 BASE-PAIR TATA-CONTAINING OLIGONUCLEOTIDE BOTTOM STRAND 5804.773 5'-D(*G*GP*AP*GP*CP*CP*CP*TP*TP*TP*TP*AP*TP*AP*GP*CP*CP*AP*A)-3' 1 syn polymer 10813.676 Transcription Regulator NC2 alpha chain RESIDUES 1-77 1 man polymer 19755.947 Transcription Regulator NC2 beta chain 1 man polymer 20856.729 TATA-BOX-BINDING PROTEIN (TBP) RESIDUES 359-539 1 man polymer 18.015 water 9 nat water DR1 PROTEIN Transcription Initiation Factor TFIID no no (DT)(DT)(DG)(DG)(DC)(DT)(DA)(DT)(DA)(DA)(DA)(DA)(DG)(DG)(DG)(DC)(DT)(DC)(DC) TTGGCTATAAAAGGGCTCC D polydeoxyribonucleotide no no (DG)(DG)(DA)(DG)(DC)(DC)(DC)(DT)(DT)(DT)(DT)(DA)(DT)(DA)(DG)(DC)(DC)(DA)(DA) GGAGCCCTTTTATAGCCAA E polydeoxyribonucleotide no no MPSKKKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLKQCIELEGDP AANKARKEAELAAATAEQ MPSKKKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLKQCIELEGDP AANKARKEAELAAATAEQ A NYSGXRC-P048a polypeptide(L) no no GPHMASSSGNDDDLTIPRAAINKMIKETLPNVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTISPEHVIQALES LGFGSYISEVKEVLQECKTVALKRRKASSRLENLGIPEEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAAS ASASNQAGSSQDEEDDDDI GPHMASSSGNDDDLTIPRAAINKMIKETLPNVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTISPEHVIQALES LGFGSYISEVKEVLQECKTVALKRRKASSRLENLGIPEEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAAS ASASNQAGSSQDEEDDDDI B polypeptide(L) no no GSHMSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAA RKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTG AKVRAEIYEAFENIYPILKGFRKTT GSHMSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAA RKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTG AKVRAEIYEAFENIYPILKGFRKTT C polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia Escherichia coli sample NC2 alpha (DRAP1) 9606 Homo sapiens 469008 Escherichia coli BL21(DE3) BL21(DE3) plasmid His tag eliminated. coexpressed with NC2 beta pET11d human Homo Escherichia Escherichia coli sample NC2 beta (Dr1) 9606 Homo sapiens 469008 Escherichia coli BL21(DE3) BL21(DE3) plasmid coexpressed with NC2 alpha pET28a human Homo Escherichia Escherichia coli sample tbp 9606 Homo sapiens 469008 Escherichia coli BL21(DE3) BL21(DE3) plasmid codon usage is optimized for this gene pET15b 1 2.79 55.84 VAPOR DIFFUSION, HANGING DROP 5.5 PEG 4000, sodium citrate, potassium chloride, magnesium chloride, DTT, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K 293 PEG 4000 1 sodium citrate 1 KCl 1 MgCl2 1 DTT 1 0.777 1 20 D 602 E 718 -1.585 D_DT602:DA718_E 1 -9.363 -0.211 -0.299 -0.125 8.073 1 19 D 603 E 717 1.001 D_DG603:DC717_E 2 -4.894 0.184 0.213 0.008 -3.756 1 19 D 604 E 716 -5.032 D_DG604:DC716_E 3 -5.869 -0.369 -0.143 -0.190 -10.704 1 19 D 605 E 715 -2.958 D_DC605:DG715_E 4 -4.881 0.018 0.228 -0.116 -10.930 1 20 D 606 E 714 13.308 D_DT606:DA714_E 5 7.819 0.330 -0.055 -0.094 -35.597 1 20 D 607 E 713 11.049 D_DA607:DT713_E 6 14.493 0.227 -0.001 0.044 -27.514 1 20 D 608 E 712 -6.791 D_DT608:DA712_E 7 -7.256 -0.107 -0.177 -0.226 -1.738 1 20 D 609 E 711 -2.611 D_DA609:DT711_E 8 -0.482 0.081 -0.690 -0.277 21.669 1 20 D 610 E 710 0.723 D_DA610:DT710_E 9 6.032 0.250 0.202 -0.135 27.278 1 20 D 611 E 709 0.681 D_DA611:DT709_E 10 -2.257 -0.233 -0.171 -0.077 37.686 1 20 D 612 E 708 7.902 D_DA612:DT708_E 11 -8.285 0.058 0.182 -0.017 11.378 1 19 D 613 E 707 4.691 D_DG613:DC707_E 12 9.567 1.133 -0.085 -0.049 20.436 1 19 D 614 E 706 -4.319 D_DG614:DC706_E 13 -6.201 0.841 -0.292 -0.276 -8.721 1 19 D 615 E 705 -7.564 D_DG615:DC705_E 14 -9.259 0.161 -0.803 -0.283 -8.172 1 19 D 616 E 704 3.888 D_DC616:DG704_E 15 -0.749 -0.013 -0.146 -0.043 2.546 1 20 D 617 E 703 -5.265 D_DT617:DA703_E 16 -16.378 0.242 -0.223 0.018 6.889 1 19 D 618 E 702 2.952 D_DC618:DG702_E 17 -6.580 -0.947 -0.600 0.251 2.850 30.996 D D 602 603 19.230 E E 718 717 3.120 10.068 0.772 0.066 DD_DT602DG603:DC717DA718_EE 1 -4.141 7.909 29.065 -1.708 -2.197 3.150 32.758 D D 603 604 15.203 E E 717 716 3.428 8.480 -0.689 -0.740 DD_DG603DG604:DC716DC717_EE 2 -1.026 1.840 31.654 -2.807 1.042 3.325 39.260 D D 604 605 4.132 E E 716 715 3.404 2.773 0.187 -0.921 DD_DG604DC605:DG715DC716_EE 3 -1.469 2.188 39.139 -1.711 -0.458 3.499 37.563 D D 605 606 8.685 E E 715 714 3.284 5.549 1.865 -0.058 DD_DC605DT606:DA714DG715_EE 4 6.266 -9.807 36.651 -0.851 -2.038 0.875 46.765 D D 606 607 68.753 E E 714 713 4.115 43.377 0.312 -0.803 DD_DT606DA607:DT713DA714_EE 5 2.634 -4.175 17.711 -5.179 -0.140 1.579 33.608 D D 607 608 58.386 E E 713 712 3.562 28.342 -1.629 -0.066 DD_DA607DT608:DA712DT713_EE 6 5.051 -10.405 17.527 -4.987 3.685 3.452 27.408 D D 608 609 22.243 E E 712 711 2.886 10.279 0.197 2.071 DD_DT608DA609:DT711DA712_EE 7 2.165 -4.686 25.351 1.809 0.124 2.380 26.797 D D 609 610 64.495 E E 711 710 3.101 23.892 0.526 1.336 DD_DA609DA610:DT710DT711_EE 8 -5.117 13.814 11.086 -4.537 -2.723 3.222 26.607 D D 610 611 49.890 E E 710 709 3.698 20.169 -0.342 1.198 DD_DA610DA611:DT709DT710_EE 9 4.009 -9.916 16.976 -4.290 2.113 3.073 31.976 D D 611 612 42.141 E E 709 708 3.371 21.293 0.468 0.785 DD_DA611DA612:DT708DT709_EE 10 1.236 -2.447 23.962 -2.951 -0.596 3.375 48.358 D D 612 613 56.826 E E 708 707 4.652 40.075 -0.042 0.830 DD_DA612DG613:DC707DT708_EE 11 2.407 -3.413 27.532 -4.022 0.353 3.261 32.372 D D 613 614 9.550 E E 707 706 3.308 5.295 -1.104 0.650 DD_DG613DG614:DC706DC707_EE 12 2.876 -5.187 31.821 0.220 2.495 2.920 34.598 D D 614 615 29.006 E E 706 705 4.005 16.578 -0.268 -1.305 DD_DG614DG615:DC705DC706_EE 13 0.985 -1.723 30.459 -5.087 0.623 2.876 34.952 D D 615 616 12.724 E E 705 704 3.151 7.578 1.054 -0.555 DD_DG615DC616:DG704DC705_EE 14 -2.700 4.533 34.042 -1.993 -2.136 3.244 31.357 D D 616 617 7.762 E E 704 703 3.268 4.183 -1.786 0.048 DD_DC616DT617:DA703DG704_EE 15 0.048 -0.089 31.083 -0.698 3.314 3.415 36.334 D D 617 618 12.476 E E 703 702 3.282 7.709 0.854 0.636 DD_DT617DC618:DG702DA703_EE 16 4.054 -6.561 35.309 -0.098 -0.782 New York SGX Research Center for Structural Genomics NYSGXRC PSI, Protein Structure Initiative audit_author citation_author struct_ref_seq_dif chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model repository Initial release Version format compliance Version format compliance Database references Structure summary Data collection Database references Refinement description 1 0 2001-07-11 1 1 2008-04-27 1 2 2011-07-13 1 3 2021-02-03 1 4 2023-08-16 _audit_author.identifier_ORCID _citation_author.identifier_ORCID _struct_ref_seq_dif.details _database_2.pdbx_DOI _database_2.pdbx_database_accession Y RCSB Y RCSB 2001-06-20 REL REL HOH water 1CDW PDB ENTRY 1CDW PDB experimental model HOH 1005 6 HOH HOH 1005 D HOH 1001 6 HOH HOH 1001 A HOH 1003 6 HOH HOH 1003 B HOH 1002 6 HOH HOH 1002 C HOH 1004 6 HOH HOH 1004 C HOH 1006 6 HOH HOH 1006 C HOH 1007 6 HOH HOH 1007 C HOH 1008 6 HOH HOH 1008 C HOH 1009 6 HOH HOH 1009 C T 601 n 1 DT 601 D T 602 n 2 DT 602 D G 603 n 3 DG 603 D G 604 n 4 DG 604 D C 605 n 5 DC 605 D T 606 n 6 DT 606 D A 607 n 7 DA 607 D T 608 n 8 DT 608 D A 609 n 9 DA 609 D A 610 n 10 DA 610 D A 611 n 11 DA 611 D A 612 n 12 DA 612 D G 613 n 13 DG 613 D G 614 n 14 DG 614 D G 615 n 15 DG 615 D C 616 n 16 DC 616 D T 617 n 17 DT 617 D C 618 n 18 DC 618 D n 19 619 D n 1 701 E G 702 n 2 DG 702 E A 703 n 3 DA 703 E G 704 n 4 DG 704 E C 705 n 5 DC 705 E C 706 n 6 DC 706 E C 707 n 7 DC 707 E T 708 n 8 DT 708 E T 709 n 9 DT 709 E T 710 n 10 DT 710 E T 711 n 11 DT 711 E A 712 n 12 DA 712 E T 713 n 13 DT 713 E A 714 n 14 DA 714 E G 715 n 15 DG 715 E C 716 n 16 DC 716 E C 717 n 17 DC 717 E A 718 n 18 DA 718 E A 719 n 19 DA 719 E n 1 1 A n 2 2 A n 3 3 A n 4 4 A n 5 5 A n 6 6 A n 7 7 A n 8 8 A n 9 9 A ALA 10 n 10 ALA 10 A ARG 11 n 11 ARG 11 A PHE 12 n 12 PHE 12 A PRO 13 n 13 PRO 13 A PRO 14 n 14 PRO 14 A ALA 15 n 15 ALA 15 A ARG 16 n 16 ARG 16 A ILE 17 n 17 ILE 17 A LYS 18 n 18 LYS 18 A LYS 19 n 19 LYS 19 A ILE 20 n 20 ILE 20 A MET 21 n 21 MET 21 A GLN 22 n 22 GLN 22 A THR 23 n 23 THR 23 A ASP 24 n 24 ASP 24 A GLU 25 n 25 GLU 25 A GLU 26 n 26 GLU 26 A ILE 27 n 27 ILE 27 A GLY 28 n 28 GLY 28 A LYS 29 n 29 LYS 29 A VAL 30 n 30 VAL 30 A ALA 31 n 31 ALA 31 A ALA 32 n 32 ALA 32 A ALA 33 n 33 ALA 33 A VAL 34 n 34 VAL 34 A PRO 35 n 35 PRO 35 A VAL 36 n 36 VAL 36 A ILE 37 n 37 ILE 37 A ILE 38 n 38 ILE 38 A SER 39 n 39 SER 39 A ARG 40 n 40 ARG 40 A ALA 41 n 41 ALA 41 A LEU 42 n 42 LEU 42 A GLU 43 n 43 GLU 43 A LEU 44 n 44 LEU 44 A PHE 45 n 45 PHE 45 A LEU 46 n 46 LEU 46 A GLU 47 n 47 GLU 47 A SER 48 n 48 SER 48 A LEU 49 n 49 LEU 49 A LEU 50 n 50 LEU 50 A LYS 51 n 51 LYS 51 A LYS 52 n 52 LYS 52 A ALA 53 n 53 ALA 53 A CYS 54 n 54 CYS 54 A GLN 55 n 55 GLN 55 A VAL 56 n 56 VAL 56 A THR 57 n 57 THR 57 A GLN 58 n 58 GLN 58 A SER 59 n 59 SER 59 A ARG 60 n 60 ARG 60 A n 61 61 A n 62 62 A n 63 63 A THR 64 n 64 THR 64 A MET 65 n 65 MET 65 A THR 66 n 66 THR 66 A THR 67 n 67 THR 67 A SER 68 n 68 SER 68 A HIS 69 n 69 HIS 69 A LEU 70 n 70 LEU 70 A LYS 71 n 71 LYS 71 A GLN 72 n 72 GLN 72 A CYS 73 n 73 CYS 73 A ILE 74 n 74 ILE 74 A GLU 75 n 75 GLU 75 A n 76 76 A n 77 77 A n 78 78 A n 79 79 A n 80 80 A n 81 81 A n 82 82 A n 83 83 A n 84 84 A n 85 85 A n 86 86 A n 87 87 A n 88 88 A n 89 89 A n 90 90 A n 91 91 A n 92 92 A n 93 93 A n 94 94 A n 95 95 A n 96 96 A n 97 97 A n 98 98 A n 1 98 B n 2 99 B n 3 100 B n 4 101 B n 5 102 B n 6 103 B n 7 104 B n 8 105 B n 9 106 B n 10 107 B n 11 108 B ASP 109 n 12 ASP 109 B ASP 110 n 13 ASP 110 B LEU 111 n 14 LEU 111 B THR 112 n 15 THR 112 B ILE 113 n 16 ILE 113 B PRO 114 n 17 PRO 114 B ARG 115 n 18 ARG 115 B ALA 116 n 19 ALA 116 B ALA 117 n 20 ALA 117 B ILE 118 n 21 ILE 118 B ASN 119 n 22 ASN 119 B LYS 120 n 23 LYS 120 B MET 121 n 24 MET 121 B ILE 122 n 25 ILE 122 B LYS 123 n 26 LYS 123 B GLU 124 n 27 GLU 124 B THR 125 n 28 THR 125 B LEU 126 n 29 LEU 126 B PRO 127 n 30 PRO 127 B ASN 128 n 31 ASN 128 B VAL 129 n 32 VAL 129 B ARG 130 n 33 ARG 130 B VAL 131 n 34 VAL 131 B ALA 132 n 35 ALA 132 B ASN 133 n 36 ASN 133 B ASP 134 n 37 ASP 134 B ALA 135 n 38 ALA 135 B ARG 136 n 39 ARG 136 B GLU 137 n 40 GLU 137 B LEU 138 n 41 LEU 138 B VAL 139 n 42 VAL 139 B VAL 140 n 43 VAL 140 B ASN 141 n 44 ASN 141 B CYS 142 n 45 CYS 142 B CYS 143 n 46 CYS 143 B THR 144 n 47 THR 144 B GLU 145 n 48 GLU 145 B PHE 146 n 49 PHE 146 B ILE 147 n 50 ILE 147 B HIS 148 n 51 HIS 148 B LEU 149 n 52 LEU 149 B ILE 150 n 53 ILE 150 B SER 151 n 54 SER 151 B SER 152 n 55 SER 152 B GLU 153 n 56 GLU 153 B ALA 154 n 57 ALA 154 B ASN 155 n 58 ASN 155 B GLU 156 n 59 GLU 156 B ILE 157 n 60 ILE 157 B CYS 158 n 61 CYS 158 B ASN 159 n 62 ASN 159 B LYS 160 n 63 LYS 160 B SER 161 n 64 SER 161 B GLU 162 n 65 GLU 162 B LYS 163 n 66 LYS 163 B LYS 164 n 67 LYS 164 B THR 165 n 68 THR 165 B ILE 166 n 69 ILE 166 B SER 167 n 70 SER 167 B PRO 168 n 71 PRO 168 B GLU 169 n 72 GLU 169 B HIS 170 n 73 HIS 170 B VAL 171 n 74 VAL 171 B ILE 172 n 75 ILE 172 B GLN 173 n 76 GLN 173 B ALA 174 n 77 ALA 174 B LEU 175 n 78 LEU 175 B GLU 176 n 79 GLU 176 B SER 177 n 80 SER 177 B LEU 178 n 81 LEU 178 B GLY 179 n 82 GLY 179 B PHE 180 n 83 PHE 180 B GLY 181 n 84 GLY 181 B SER 182 n 85 SER 182 B TYR 183 n 86 TYR 183 B ILE 184 n 87 ILE 184 B SER 185 n 88 SER 185 B GLU 186 n 89 GLU 186 B VAL 187 n 90 VAL 187 B LYS 188 n 91 LYS 188 B GLU 189 n 92 GLU 189 B VAL 190 n 93 VAL 190 B LEU 191 n 94 LEU 191 B GLN 192 n 95 GLN 192 B GLU 193 n 96 GLU 193 B CYS 194 n 97 CYS 194 B LYS 195 n 98 LYS 195 B THR 196 n 99 THR 196 B VAL 197 n 100 VAL 197 B ALA 198 n 101 ALA 198 B LEU 199 n 102 LEU 199 B LYS 200 n 103 LYS 200 B ARG 201 n 104 ARG 201 B ARG 202 n 105 ARG 202 B LYS 203 n 106 LYS 203 B ALA 204 n 107 ALA 204 B SER 205 n 108 SER 205 B SER 206 n 109 SER 206 B ARG 207 n 110 ARG 207 B LEU 208 n 111 LEU 208 B GLU 209 n 112 GLU 209 B ASN 210 n 113 ASN 210 B LEU 211 n 114 LEU 211 B GLY 212 n 115 GLY 212 B ILE 213 n 116 ILE 213 B PRO 214 n 117 PRO 214 B GLU 215 n 118 GLU 215 B GLU 216 n 119 GLU 216 B GLU 217 n 120 GLU 217 B LEU 218 n 121 LEU 218 B LEU 219 n 122 LEU 219 B ARG 220 n 123 ARG 220 B GLN 221 n 124 GLN 221 B GLN 222 n 125 GLN 222 B GLN 223 n 126 GLN 223 B GLU 224 n 127 GLU 224 B LEU 225 n 128 LEU 225 B PHE 226 n 129 PHE 226 B ALA 227 n 130 ALA 227 B LYS 228 n 131 LYS 228 B ALA 229 n 132 ALA 229 B ARG 230 n 133 ARG 230 B GLN 231 n 134 GLN 231 B GLN 232 n 135 GLN 232 B GLN 233 n 136 GLN 233 B ALA 234 n 137 ALA 234 B GLU 235 n 138 GLU 235 B LEU 236 n 139 LEU 236 B ALA 237 n 140 ALA 237 B GLN 238 n 141 GLN 238 B GLN 239 n 142 GLN 239 B GLU 240 n 143 GLU 240 B TRP 241 n 144 TRP 241 B LEU 242 n 145 LEU 242 B GLN 243 n 146 GLN 243 B n 147 244 B n 148 245 B n 149 246 B n 150 247 B n 151 248 B n 152 249 B n 153 250 B n 154 251 B n 155 252 B n 156 253 B n 157 254 B n 158 255 B n 159 256 B n 160 257 B n 161 258 B n 162 259 B n 163 260 B n 164 261 B n 165 262 B n 166 263 B n 167 264 B n 168 265 B n 169 266 B n 170 267 B n 171 268 B n 172 269 B n 173 270 B n 174 271 B n 175 272 B n 176 273 B n 177 274 B n 178 275 B n 179 276 B n 1 355 C SER 356 n 2 SER 356 C HIS 357 n 3 HIS 357 C MET 358 n 4 MET 358 C SER 359 n 5 SER 359 C GLY 360 n 6 GLY 360 C ILE 361 n 7 ILE 361 C VAL 362 n 8 VAL 362 C PRO 363 n 9 PRO 363 C GLN 364 n 10 GLN 364 C LEU 365 n 11 LEU 365 C GLN 366 n 12 GLN 366 C ASN 367 n 13 ASN 367 C ILE 368 n 14 ILE 368 C VAL 369 n 15 VAL 369 C SER 370 n 16 SER 370 C THR 371 n 17 THR 371 C VAL 372 n 18 VAL 372 C ASN 373 n 19 ASN 373 C LEU 374 n 20 LEU 374 C GLY 375 n 21 GLY 375 C CYS 376 n 22 CYS 376 C LYS 377 n 23 LYS 377 C LEU 378 n 24 LEU 378 C ASP 379 n 25 ASP 379 C LEU 380 n 26 LEU 380 C LYS 381 n 27 LYS 381 C THR 382 n 28 THR 382 C ILE 383 n 29 ILE 383 C ALA 384 n 30 ALA 384 C LEU 385 n 31 LEU 385 C ARG 386 n 32 ARG 386 C ALA 387 n 33 ALA 387 C ARG 388 n 34 ARG 388 C ASN 389 n 35 ASN 389 C ALA 390 n 36 ALA 390 C GLU 391 n 37 GLU 391 C TYR 392 n 38 TYR 392 C ASN 393 n 39 ASN 393 C PRO 394 n 40 PRO 394 C LYS 395 n 41 LYS 395 C ARG 396 n 42 ARG 396 C PHE 397 n 43 PHE 397 C ALA 398 n 44 ALA 398 C ALA 399 n 45 ALA 399 C VAL 400 n 46 VAL 400 C ILE 401 n 47 ILE 401 C MET 402 n 48 MET 402 C ARG 403 n 49 ARG 403 C ILE 404 n 50 ILE 404 C ARG 405 n 51 ARG 405 C GLU 406 n 52 GLU 406 C PRO 407 n 53 PRO 407 C ARG 408 n 54 ARG 408 C THR 409 n 55 THR 409 C THR 410 n 56 THR 410 C ALA 411 n 57 ALA 411 C LEU 412 n 58 LEU 412 C ILE 413 n 59 ILE 413 C PHE 414 n 60 PHE 414 C SER 415 n 61 SER 415 C SER 416 n 62 SER 416 C GLY 417 n 63 GLY 417 C LYS 418 n 64 LYS 418 C MET 419 n 65 MET 419 C VAL 420 n 66 VAL 420 C CYS 421 n 67 CYS 421 C THR 422 n 68 THR 422 C GLY 423 n 69 GLY 423 C ALA 424 n 70 ALA 424 C LYS 425 n 71 LYS 425 C SER 426 n 72 SER 426 C GLU 427 n 73 GLU 427 C GLU 428 n 74 GLU 428 C GLN 429 n 75 GLN 429 C SER 430 n 76 SER 430 C ARG 431 n 77 ARG 431 C LEU 432 n 78 LEU 432 C ALA 433 n 79 ALA 433 C ALA 434 n 80 ALA 434 C ARG 435 n 81 ARG 435 C LYS 436 n 82 LYS 436 C TYR 437 n 83 TYR 437 C ALA 438 n 84 ALA 438 C ARG 439 n 85 ARG 439 C VAL 440 n 86 VAL 440 C VAL 441 n 87 VAL 441 C GLN 442 n 88 GLN 442 C LYS 443 n 89 LYS 443 C LEU 444 n 90 LEU 444 C GLY 445 n 91 GLY 445 C PHE 446 n 92 PHE 446 C PRO 447 n 93 PRO 447 C ALA 448 n 94 ALA 448 C LYS 449 n 95 LYS 449 C PHE 450 n 96 PHE 450 C LEU 451 n 97 LEU 451 C ASP 452 n 98 ASP 452 C PHE 453 n 99 PHE 453 C LYS 454 n 100 LYS 454 C ILE 455 n 101 ILE 455 C GLN 456 n 102 GLN 456 C ASN 457 n 103 ASN 457 C MET 458 n 104 MET 458 C VAL 459 n 105 VAL 459 C GLY 460 n 106 GLY 460 C SER 461 n 107 SER 461 C CYS 462 n 108 CYS 462 C ASP 463 n 109 ASP 463 C VAL 464 n 110 VAL 464 C LYS 465 n 111 LYS 465 C PHE 466 n 112 PHE 466 C PRO 467 n 113 PRO 467 C ILE 468 n 114 ILE 468 C ARG 469 n 115 ARG 469 C LEU 470 n 116 LEU 470 C GLU 471 n 117 GLU 471 C GLY 472 n 118 GLY 472 C LEU 473 n 119 LEU 473 C VAL 474 n 120 VAL 474 C LEU 475 n 121 LEU 475 C THR 476 n 122 THR 476 C HIS 477 n 123 HIS 477 C GLN 478 n 124 GLN 478 C GLN 479 n 125 GLN 479 C PHE 480 n 126 PHE 480 C SER 481 n 127 SER 481 C SER 482 n 128 SER 482 C TYR 483 n 129 TYR 483 C GLU 484 n 130 GLU 484 C PRO 485 n 131 PRO 485 C GLU 486 n 132 GLU 486 C LEU 487 n 133 LEU 487 C PHE 488 n 134 PHE 488 C PRO 489 n 135 PRO 489 C GLY 490 n 136 GLY 490 C LEU 491 n 137 LEU 491 C ILE 492 n 138 ILE 492 C TYR 493 n 139 TYR 493 C ARG 494 n 140 ARG 494 C MET 495 n 141 MET 495 C ILE 496 n 142 ILE 496 C LYS 497 n 143 LYS 497 C PRO 498 n 144 PRO 498 C ARG 499 n 145 ARG 499 C ILE 500 n 146 ILE 500 C VAL 501 n 147 VAL 501 C LEU 502 n 148 LEU 502 C LEU 503 n 149 LEU 503 C ILE 504 n 150 ILE 504 C PHE 505 n 151 PHE 505 C VAL 506 n 152 VAL 506 C SER 507 n 153 SER 507 C GLY 508 n 154 GLY 508 C LYS 509 n 155 LYS 509 C VAL 510 n 156 VAL 510 C VAL 511 n 157 VAL 511 C LEU 512 n 158 LEU 512 C THR 513 n 159 THR 513 C GLY 514 n 160 GLY 514 C ALA 515 n 161 ALA 515 C LYS 516 n 162 LYS 516 C VAL 517 n 163 VAL 517 C ARG 518 n 164 ARG 518 C ALA 519 n 165 ALA 519 C GLU 520 n 166 GLU 520 C ILE 521 n 167 ILE 521 C TYR 522 n 168 TYR 522 C GLU 523 n 169 GLU 523 C ALA 524 n 170 ALA 524 C PHE 525 n 171 PHE 525 C GLU 526 n 172 GLU 526 C ASN 527 n 173 ASN 527 C ILE 528 n 174 ILE 528 C TYR 529 n 175 TYR 529 C PRO 530 n 176 PRO 530 C ILE 531 n 177 ILE 531 C LEU 532 n 178 LEU 532 C LYS 533 n 179 LYS 533 C GLY 534 n 180 GLY 534 C PHE 535 n 181 PHE 535 C ARG 536 n 182 ARG 536 C LYS 537 n 183 LYS 537 C THR 538 n 184 THR 538 C n 185 539 C author_defined_assembly 5 pentameric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 C O ASN 393 E O ASN 39 C N PHE 397 E N PHE 43 C O ILE 404 E O ILE 50 C N THR 410 E N THR 56 C N LEU 412 E N LEU 58 C O VAL 420 E O VAL 66 C O CYS 421 E O CYS 67 C N SER 370 E N SER 16 C N ASN 373 E N ASN 19 C O LEU 451 E O LEU 97 C O CYS 462 E O CYS 108 C N VAL 511 E N VAL 157 C O THR 513 E O THR 159 C N VAL 501 E N VAL 147 C O ILE 504 E O ILE 150 C N LEU 491 E N LEU 137 C N ILE 492 E N ILE 138 C O SER 482 E O SER 128 1 E P DG 702 B P DG 2 1 Y 1 E OP1 DG 702 B OP1 DG 2 1 Y 1 E OP2 DG 702 B OP2 DG 2 1 Y 1 B CG TRP 241 D CG TRP 144 1 Y 1 B CD1 TRP 241 D CD1 TRP 144 1 Y 1 B CD2 TRP 241 D CD2 TRP 144 1 Y 1 B NE1 TRP 241 D NE1 TRP 144 1 Y 1 B CE2 TRP 241 D CE2 TRP 144 1 Y 1 B CE3 TRP 241 D CE3 TRP 144 1 Y 1 B CZ2 TRP 241 D CZ2 TRP 144 1 Y 1 B CZ3 TRP 241 D CZ3 TRP 144 1 Y 1 B CH2 TRP 241 D CH2 TRP 144 1 Y 1 B CG LEU 242 D CG LEU 145 1 Y 1 B CD1 LEU 242 D CD1 LEU 145 1 Y 1 B CD2 LEU 242 D CD2 LEU 145 1 Y 1 B CG GLN 243 D CG GLN 146 1 Y 1 B CD GLN 243 D CD GLN 146 1 Y 1 B OE1 GLN 243 D OE1 GLN 146 1 Y 1 B NE2 GLN 243 D NE2 GLN 146 1 Y 1 D DC 619 A DC 19 1 Y 1 E DG 701 B DG 1 1 Y 1 A MET 1 C MET 1 1 Y 1 A PRO 2 C PRO 2 1 Y 1 A SER 3 C SER 3 1 Y 1 A LYS 4 C LYS 4 1 Y 1 A LYS 5 C LYS 5 1 Y 1 A LYS 6 C LYS 6 1 Y 1 A LYS 7 C LYS 7 1 Y 1 A TYR 8 C TYR 8 1 Y 1 A ASN 9 C ASN 9 1 Y 1 A ASN 61 C ASN 61 1 Y 1 A ALA 62 C ALA 62 1 Y 1 A LYS 63 C LYS 63 1 Y 1 A LEU 76 C LEU 76 1 Y 1 A GLU 77 C GLU 77 1 Y 1 A GLY 78 C GLY 78 1 Y 1 A ASP 79 C ASP 79 1 Y 1 A PRO 80 C PRO 80 1 Y 1 A ALA 81 C ALA 81 1 Y 1 A ALA 82 C ALA 82 1 Y 1 A ASN 83 C ASN 83 1 Y 1 A LYS 84 C LYS 84 1 Y 1 A ALA 85 C ALA 85 1 Y 1 A ARG 86 C ARG 86 1 Y 1 A LYS 87 C LYS 87 1 Y 1 A GLU 88 C GLU 88 1 Y 1 A ALA 89 C ALA 89 1 Y 1 A GLU 90 C GLU 90 1 Y 1 A LEU 91 C LEU 91 1 Y 1 A ALA 92 C ALA 92 1 Y 1 A ALA 93 C ALA 93 1 Y 1 A ALA 94 C ALA 94 1 Y 1 A THR 95 C THR 95 1 Y 1 A ALA 96 C ALA 96 1 Y 1 A GLU 97 C GLU 97 1 Y 1 A GLN 98 C GLN 98 1 Y 1 B GLY 98 D GLY 1 1 Y 1 B PRO 99 D PRO 2 1 Y 1 B HIS 100 D HIS 3 1 Y 1 B MET 101 D MET 4 1 Y 1 B ALA 102 D ALA 5 1 Y 1 B SER 103 D SER 6 1 Y 1 B SER 104 D SER 7 1 Y 1 B SER 105 D SER 8 1 Y 1 B GLY 106 D GLY 9 1 Y 1 B ASN 107 D ASN 10 1 Y 1 B ASP 108 D ASP 11 1 Y 1 B MET 244 D MET 147 1 Y 1 B GLN 245 D GLN 148 1 Y 1 B GLN 246 D GLN 149 1 Y 1 B ALA 247 D ALA 150 1 Y 1 B ALA 248 D ALA 151 1 Y 1 B GLN 249 D GLN 152 1 Y 1 B GLN 250 D GLN 153 1 Y 1 B ALA 251 D ALA 154 1 Y 1 B GLN 252 D GLN 155 1 Y 1 B LEU 253 D LEU 156 1 Y 1 B ALA 254 D ALA 157 1 Y 1 B ALA 255 D ALA 158 1 Y 1 B ALA 256 D ALA 159 1 Y 1 B SER 257 D SER 160 1 Y 1 B ALA 258 D ALA 161 1 Y 1 B SER 259 D SER 162 1 Y 1 B ALA 260 D ALA 163 1 Y 1 B SER 261 D SER 164 1 Y 1 B ASN 262 D ASN 165 1 Y 1 B GLN 263 D GLN 166 1 Y 1 B ALA 264 D ALA 167 1 Y 1 B GLY 265 D GLY 168 1 Y 1 B SER 266 D SER 169 1 Y 1 B SER 267 D SER 170 1 Y 1 B GLN 268 D GLN 171 1 Y 1 B ASP 269 D ASP 172 1 Y 1 B GLU 270 D GLU 173 1 Y 1 B GLU 271 D GLU 174 1 Y 1 B ASP 272 D ASP 175 1 Y 1 B ASP 273 D ASP 176 1 Y 1 B ASP 274 D ASP 177 1 Y 1 B ASP 275 D ASP 178 1 Y 1 B ILE 276 D ILE 179 1 Y 1 C GLY 355 E GLY 1 1 Y 1 C THR 539 E THR 185 1 Y 1 D DG 604 0.096 SIDE CHAIN 1 D DC 605 0.083 SIDE CHAIN 1 D DT 606 0.097 SIDE CHAIN 1 D DA 612 0.058 SIDE CHAIN 1 E DA 712 0.057 SIDE CHAIN 1 E DT 713 0.073 SIDE CHAIN 1 C C NH2 NH2 ARG ARG 386 386 1.88 1_555 3_755 1 A PRO 13 -53.54 102.60 1 A GLN 72 -70.55 20.19 1 B LEU 126 -111.54 72.42 1 B ASN 128 73.98 55.55 1 B SER 161 -70.18 23.15 1 B GLU 162 41.56 24.73 1 B ILE 166 -55.42 109.92 1 B ILE 184 -47.31 -18.25 1 C CYS 376 -177.94 133.82 1 C ARG 388 -51.14 -81.84 1 C ARG 408 -59.22 109.11 1 C PRO 447 -67.14 61.20 1 C PHE 466 178.28 134.02 1 C PRO 467 -49.85 156.99 1 C VAL 506 -38.39 -35.39 61.53 -16.66 0.00 0.00 21.02 0.00 -4.36 0.2770000 0.007 0.2330000 0.2390000 0.2360000 2.62 19.84 1499 21653 21084 7.1 97.4 1.00 1.00 RANDOM 1 isotropic THROUGHOUT 2 0 MOLECULAR REPLACEMENT PDB ENTRY 1CDW Engh & Huber CNS bulk solvent model used 29.7687 0.302265 0.44 0.37 5.00 0.46 0.42 2.62 19.84 9 3743 0 732 3002 0.006 1.3 20.7 1.10 0.3530000 0.027 0.3600000 2.74 177 2387 8 6.7 90.1 0.3290000 0.024 0.3330000 2.88 192 2572 8 7.2 96.1 0.2810000 0.021 0.2830000 3.06 173 2622 8 6.5 97.8 0.2950000 0.021 0.2940000 3.30 193 2627 8 7.2 98.3 0.2550000 0.019 0.2520000 3.63 178 2667 8 6.6 99.0 0.2250000 0.016 0.2220000 4.15 186 2697 8 6.9 99.4 0.1790000 0.013 0.1790000 5.21 201 2719 8 7.4 99.7 0.2070000 0.015 0.2080000 19.84 199 2793 8 7.0 98.4 78.4 2.62 20.0 1JFI 21406 21406 0 -3.0 0.0580000 0.0580000 1 19.6 6.7 98.4 0.3120000 2.62 2.71 1952 0.3120000 5.2 91.6 refinement Axel T. Brunger axel.brunger@yale.edu 1998 Fortran CNS package 0.9 data reduction DENZO data scaling SCALEPACK phasing AMoRE Crystal Structure of the NC2-TBP-DNA Ternary Complex 1 N N 2 N N 3 N N 4 N N 5 N N 6 N N 6 N N 6 N N 6 N N A PRO 13 C PRO 13 HELX_P A GLN 22 C GLN 22 1 1 10 A ALA 32 C ALA 32 HELX_P A GLN 58 C GLN 58 1 2 27 A THR 66 C THR 66 HELX_P A GLN 72 C GLN 72 1 3 7 B PRO 114 D PRO 17 HELX_P B LEU 126 D LEU 29 1 4 13 B ALA 132 D ALA 35 HELX_P B SER 161 D SER 64 1 5 30 B SER 167 D SER 70 HELX_P B GLY 179 D GLY 82 1 6 13 B PHE 180 D PHE 83 HELX_P B SER 182 D SER 85 5 7 3 B TYR 183 D TYR 86 HELX_P B GLU 209 D GLU 112 1 8 27 B PRO 214 D PRO 117 HELX_P B LEU 242 D LEU 145 1 9 29 C ASP 379 E ASP 25 HELX_P C ALA 387 E ALA 33 1 10 9 C SER 426 E SER 72 HELX_P C LEU 444 E LEU 90 1 11 19 C ARG 469 E ARG 115 HELX_P C HIS 477 E HIS 123 1 12 9 C VAL 517 E VAL 163 HELX_P C GLY 534 E GLY 180 1 13 18 hydrog WATSON-CRICK D DT 602 A N3 DT 2 1_555 E DA 718 B N1 DA 18 1_555 hydrog WATSON-CRICK D DT 602 A O4 DT 2 1_555 E DA 718 B N6 DA 18 1_555 hydrog WATSON-CRICK D DG 603 A N1 DG 3 1_555 E DC 717 B N3 DC 17 1_555 hydrog WATSON-CRICK D DG 603 A N2 DG 3 1_555 E DC 717 B O2 DC 17 1_555 hydrog WATSON-CRICK D DG 603 A O6 DG 3 1_555 E DC 717 B N4 DC 17 1_555 hydrog WATSON-CRICK D DG 604 A N1 DG 4 1_555 E DC 716 B N3 DC 16 1_555 hydrog WATSON-CRICK D DG 604 A N2 DG 4 1_555 E DC 716 B O2 DC 16 1_555 hydrog WATSON-CRICK D DG 604 A O6 DG 4 1_555 E DC 716 B N4 DC 16 1_555 hydrog WATSON-CRICK D DC 605 A N3 DC 5 1_555 E DG 715 B N1 DG 15 1_555 hydrog WATSON-CRICK D DC 605 A N4 DC 5 1_555 E DG 715 B O6 DG 15 1_555 hydrog WATSON-CRICK D DC 605 A O2 DC 5 1_555 E DG 715 B N2 DG 15 1_555 hydrog WATSON-CRICK D DT 606 A N3 DT 6 1_555 E DA 714 B N1 DA 14 1_555 hydrog WATSON-CRICK D DT 606 A O4 DT 6 1_555 E DA 714 B N6 DA 14 1_555 hydrog WATSON-CRICK D DA 607 A N1 DA 7 1_555 E DT 713 B N3 DT 13 1_555 hydrog WATSON-CRICK D DA 607 A N6 DA 7 1_555 E DT 713 B O4 DT 13 1_555 hydrog WATSON-CRICK D DT 608 A N3 DT 8 1_555 E DA 712 B N1 DA 12 1_555 hydrog WATSON-CRICK D DT 608 A O4 DT 8 1_555 E DA 712 B N6 DA 12 1_555 hydrog WATSON-CRICK D DA 609 A N1 DA 9 1_555 E DT 711 B N3 DT 11 1_555 hydrog WATSON-CRICK D DA 609 A N6 DA 9 1_555 E DT 711 B O4 DT 11 1_555 hydrog WATSON-CRICK D DA 610 A N1 DA 10 1_555 E DT 710 B N3 DT 10 1_555 hydrog WATSON-CRICK D DA 610 A N6 DA 10 1_555 E DT 710 B O4 DT 10 1_555 hydrog WATSON-CRICK D DA 611 A N1 DA 11 1_555 E DT 709 B N3 DT 9 1_555 hydrog WATSON-CRICK D DA 611 A N6 DA 11 1_555 E DT 709 B O4 DT 9 1_555 hydrog WATSON-CRICK D DA 612 A N1 DA 12 1_555 E DT 708 B N3 DT 8 1_555 hydrog WATSON-CRICK D DA 612 A N6 DA 12 1_555 E DT 708 B O4 DT 8 1_555 hydrog WATSON-CRICK D DG 613 A N1 DG 13 1_555 E DC 707 B N3 DC 7 1_555 hydrog WATSON-CRICK D DG 613 A N2 DG 13 1_555 E DC 707 B O2 DC 7 1_555 hydrog WATSON-CRICK D DG 613 A O6 DG 13 1_555 E DC 707 B N4 DC 7 1_555 hydrog WATSON-CRICK D DG 614 A N1 DG 14 1_555 E DC 706 B N3 DC 6 1_555 hydrog WATSON-CRICK D DG 614 A N2 DG 14 1_555 E DC 706 B O2 DC 6 1_555 hydrog WATSON-CRICK D DG 614 A O6 DG 14 1_555 E DC 706 B N4 DC 6 1_555 hydrog WATSON-CRICK D DG 615 A N1 DG 15 1_555 E DC 705 B N3 DC 5 1_555 hydrog WATSON-CRICK D DG 615 A N2 DG 15 1_555 E DC 705 B O2 DC 5 1_555 hydrog WATSON-CRICK D DG 615 A O6 DG 15 1_555 E DC 705 B N4 DC 5 1_555 hydrog WATSON-CRICK D DC 616 A N3 DC 16 1_555 E DG 704 B N1 DG 4 1_555 hydrog WATSON-CRICK D DC 616 A N4 DC 16 1_555 E DG 704 B O6 DG 4 1_555 hydrog WATSON-CRICK D DC 616 A O2 DC 16 1_555 E DG 704 B N2 DG 4 1_555 hydrog WATSON-CRICK D DT 617 A N3 DT 17 1_555 E DA 703 B N1 DA 3 1_555 hydrog WATSON-CRICK D DT 617 A O4 DT 17 1_555 E DA 703 B N6 DA 3 1_555 hydrog WATSON-CRICK D DC 618 A N3 DC 18 1_555 E DG 702 B N1 DG 2 1_555 hydrog WATSON-CRICK D DC 618 A N4 DC 18 1_555 E DG 702 B O6 DG 2 1_555 hydrog WATSON-CRICK D DC 618 A O2 DC 18 1_555 E DG 702 B N2 DG 2 1_555 TRANSCRIPTION/DNA Histone, H2A/H2B, TBP, TATA-DNA, transcription initiation, NC2, Negative Cofactor, Structural Genomics, PSI, Protein Structure Initiative, New York SGX Research Center for Structural Genomics, NYSGXRC, TRANSCRIPTION-DNA COMPLEX C GLU 406 E GLU 52 1 C PRO 407 E PRO 53 -0.39 C LYS 497 E LYS 143 1 C PRO 498 E PRO 144 0.24 DRAP1_HUMAN UNP 3 1 Q14919 MPSKKKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLKQCIELE TBAP_HUMAN UNP 4 1 Q01658 MASSSGNDDDLTIPRAAINKMIKETLPNVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTISPEHVIQALESLGF GSYISEVKEVLQECKTVALKRRKASSRLENLGIPEEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASA SNQAGSSQDEEDDDDI TBP_HUMAN UNP 5 159 P20226 SGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYA RVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVR AEIYEAFENIYPILKGFRKTT 1JFI PDB 1 1JFI 1JFI PDB 2 1JFI 1 77 1JFI 1 77 Q14919 A 1 1 77 1 176 1JFI 101 276 Q01658 B 2 4 179 159 339 1JFI 359 539 P20226 C 3 5 185 601 619 1JFI 601 619 1JFI D 4 1 19 701 719 1JFI 701 719 1JFI E 5 1 19 1 cloning artifact GLY 78 1JFI A Q14919 UNP 78 1 cloning artifact ASP 79 1JFI A Q14919 UNP 79 1 cloning artifact PRO 80 1JFI A Q14919 UNP 80 1 cloning artifact ALA 81 1JFI A Q14919 UNP 81 1 cloning artifact ALA 82 1JFI A Q14919 UNP 82 1 cloning artifact ASN 83 1JFI A Q14919 UNP 83 1 cloning artifact LYS 84 1JFI A Q14919 UNP 84 1 cloning artifact ALA 85 1JFI A Q14919 UNP 85 1 cloning artifact ARG 86 1JFI A Q14919 UNP 86 1 cloning artifact LYS 87 1JFI A Q14919 UNP 87 1 cloning artifact GLU 88 1JFI A Q14919 UNP 88 1 cloning artifact ALA 89 1JFI A Q14919 UNP 89 1 cloning artifact GLU 90 1JFI A Q14919 UNP 90 1 cloning artifact LEU 91 1JFI A Q14919 UNP 91 1 cloning artifact ALA 92 1JFI A Q14919 UNP 92 1 cloning artifact ALA 93 1JFI A Q14919 UNP 93 1 cloning artifact ALA 94 1JFI A Q14919 UNP 94 1 cloning artifact THR 95 1JFI A Q14919 UNP 95 1 cloning artifact ALA 96 1JFI A Q14919 UNP 96 1 cloning artifact GLU 97 1JFI A Q14919 UNP 97 1 cloning artifact GLN 98 1JFI A Q14919 UNP 98 2 cloning artifact GLY 98 1JFI B Q01658 UNP 1 2 cloning artifact PRO 99 1JFI B Q01658 UNP 2 2 cloning artifact HIS 100 1JFI B Q01658 UNP 3 3 cloning artifact GLY 355 1JFI C P20226 UNP 1 3 cloning artifact SER 356 1JFI C P20226 UNP 2 3 cloning artifact HIS 357 1JFI C P20226 UNP 3 3 cloning artifact MET 358 1JFI C P20226 UNP 4 10 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel C ALA 390 E ALA 36 C ASN 393 E ASN 39 C PHE 397 E PHE 43 C ILE 404 E ILE 50 C THR 410 E THR 56 C ILE 413 E ILE 59 C LYS 418 E LYS 64 C THR 422 E THR 68 C GLN 364 E GLN 10 C ASN 373 E ASN 19 C LEU 451 E LEU 97 C ASP 463 E ASP 109 C LYS 509 E LYS 155 C ALA 515 E ALA 161 C VAL 501 E VAL 147 C ILE 504 E ILE 150 C LEU 491 E LEU 137 C ARG 494 E ARG 140 C SER 482 E SER 128 C SER 482 E SER 128 20 C 2 2 21