0.026177 -0.000000 0.000000 0.000000 0.019040 0.000000 0.000000 0.000000 0.010403 0.00000 0.00000 0.00000 Griffith, S.C. Sawaya, M.R. Boutz, D. Thapar, N. Katz, J. Clarke, S. Yeates, T.O. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 38.201 52.522 96.129 C10 H13 N5 O4 267.241 ADENOSINE non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Na 1 22.990 SODIUM ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N O N 2 N C N 3 R C N 4 N O N 5 S C N 6 N O N 7 R C N 8 N O N 9 R C Y 10 N N Y 11 N C Y 12 N N Y 13 N C Y 14 N C N 15 N N Y 16 N N Y 17 N C Y 18 N N Y 19 N C N 20 N H N 21 N H N 22 N H N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N N N 34 S C N 35 N C N 36 N O N 37 N C N 38 N O N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N N N 47 S C N 48 N C N 49 N O N 50 N C N 51 N C N 52 N C N 53 N N N 54 N C N 55 N N N 56 N N N 57 N O N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N N N 74 S C N 75 N C N 76 N O N 77 N C N 78 N C N 79 N O N 80 N N N 81 N O N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N N N 91 S C N 92 N C N 93 N O N 94 N C N 95 N C N 96 N O N 97 N O N 98 N O N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N N N 107 S C N 108 N C N 109 N O N 110 N C N 111 N C N 112 N C N 113 N O N 114 N N N 115 N O N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N N N 127 S C N 128 N C N 129 N O N 130 N C N 131 N C N 132 N C N 133 N O N 134 N O N 135 N O N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N N N 146 N C N 147 N C N 148 N O N 149 N O N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N N N 156 S C N 157 N C N 158 N O N 159 N C Y 160 N C Y 161 N N Y 162 N C Y 163 N C Y 164 N N N 165 N O N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N O N 177 N H N 178 N H N 179 N N N 180 S C N 181 N C N 182 N O N 183 S C N 184 N C N 185 N C N 186 N C N 187 N O N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N N N 202 S C N 203 N C N 204 N O N 205 N C N 206 N C N 207 N C N 208 N C N 209 N O N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N N N 224 S C N 225 N C N 226 N O N 227 N C N 228 N C N 229 N C N 230 N C N 231 N N N 232 N O N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N N N 249 S C N 250 N C N 251 N O N 252 N C N 253 N C N 254 N S N 255 N C N 256 N O N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N NA N 269 N N N 270 S C N 271 N C N 272 N O N 273 N C Y 274 N C Y 275 N C Y 276 N C Y 277 N C Y 278 N C Y 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N N N 293 S C N 294 N C N 295 N O N 296 N C N 297 N C N 298 N C N 299 N O N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N N N 310 S C N 311 N C N 312 N O N 313 N C N 314 N O N 315 N O N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N N N 324 S C N 325 N C N 326 N O N 327 R C N 328 N O N 329 N C N 330 N O N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N N N 341 S C N 342 N C N 343 N O N 344 N C Y 345 N C Y 346 N C Y 347 N C Y 348 N N Y 349 N C Y 350 N C Y 351 N C Y 352 N C Y 353 N C N 354 N O N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N N N 368 S C N 369 N C N 370 N O N 371 N C Y 372 N C Y 373 N C Y 374 N C Y 375 N C Y 376 N C Y 377 N C N 378 N O N 379 N O N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N N N 392 S C N 393 N C N 394 N O N 395 N C N 396 N C N 397 N C N 398 N O N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing Y 20 N sing Y 21 N sing Y 22 N doub N 23 N sing Y 24 N sing Y 25 N sing Y 26 N doub N 27 N sing Y 28 N doub N 29 N sing N 30 N sing Y 31 N sing Y 32 N doub N 33 N sing Y 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N doub N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N doub N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N doub N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N doub N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N doub N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N doub N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N doub N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N doub N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N doub N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N doub N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N doub N 157 N sing N 158 N sing N 159 N sing N 160 N sing Y 161 N sing Y 162 N doub Y 163 N doub N 164 N sing Y 165 N sing N 166 N sing Y 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N doub N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N doub N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N doub N 265 N sing N 266 N sing N 267 N sing N 268 N sing Y 269 N doub Y 270 N sing Y 271 N sing N 272 N sing Y 273 N doub N 274 N sing Y 275 N doub N 276 N sing Y 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N doub N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N doub N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N doub N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N doub N 334 N sing N 335 N sing N 336 N sing N 337 N sing Y 338 N doub Y 339 N sing Y 340 N sing N 341 N sing Y 342 N doub Y 343 N sing Y 344 N sing N 345 N sing Y 346 N sing Y 347 N doub N 348 N sing Y 349 N doub N 350 N sing Y 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N doub N 362 N sing N 363 N sing N 364 N sing N 365 N sing Y 366 N doub Y 367 N sing Y 368 N sing N 369 N sing Y 370 N doub N 371 N sing Y 372 N doub N 373 N sing Y 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N doub N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing UK J.Mol.Biol. JMOBAK 0070 0022-2836 313 1103 1116 10.1006/jmbi.2001.5095 11700066 Crystal structure of a protein repair methyltransferase from Pyrococcus furiosus with its L-isoaspartyl peptide substrate. 2001 10.2210/pdb1jg2/pdb pdb_00001jg2 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 118 1 CCD 2000-10-10 ADSC QUANTUM 4 mirror SINGLE WAVELENGTH M x-ray 1 1.1000 1.0 X8C NSLS 1.1000 SYNCHROTRON NSLS BEAMLINE X8C 26613.090 protein-L-isoaspartate O-methyltransferase 2.1.1.77 1 man polymer 22.990 SODIUM ION 1 syn non-polymer 267.241 ADENOSINE 1 syn non-polymer 18.015 water 130 nat water PROTEIN-BETA-ASPARTATE METHYLTRANSFERASE; PIMT; PROTEIN L-ISOASPARTYL METHYLTRANSFERASE; L-ISOASPARTYL PROTEIN CARBOXYL METHYLTRANSFERASE E.C.2.1.1.77 no no MHLYSSDFPLMMDEKELYEKWMRTVEMLKAEGIIRSKEVERAFLKYPRYLSVEDKYKKYAHIDEPLPIPAGQTVSAPHMV AIMLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPYD VIIVTAGAPKIPEPLIEQLKIGGKLIIPVGSYHLWQELLEVRKTKDGIKIKNHGGVAFVPLIGEYGWKEHHHHHH MHLYSSDFPLMMDEKELYEKWMRTVEMLKAEGIIRSKEVERAFLKYPRYLSVEDKYKKYAHIDEPLPIPAGQTVSAPHMV AIMLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPYD VIIVTAGAPKIPEPLIEQLKIGGKLIIPVGSYHLWQELLEVRKTKDGIKIKNHGGVAFVPLIGEYGWKEHHHHHH A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Pyrococcus Escherichia sample 2261 Pyrococcus furiosus 562 Escherichia coli 1 1.81 32.07 VAPOR DIFFUSION, HANGING DROP 4.5 25% PEG 2000, 15% Glycerol, 0.2 M Ammonium Acetate pH 4.5, VAPOR DIFFUSION, HANGING DROP at 298K 298 chem_comp_atom chem_comp_bond database_2 struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 2001-11-16 1 1 2008-04-27 1 2 2011-07-13 1 3 2024-02-07 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2001-06-22 REL REL NA SODIUM ION ADN ADENOSINE HOH water NA 229 2 NA NA 236 A ADN 500 3 ADN ADN 500 A HOH 1001 4 HOH HOH 1001 A HOH 1002 4 HOH HOH 1002 A HOH 1003 4 HOH HOH 1003 A HOH 1004 4 HOH HOH 1004 A HOH 1005 4 HOH HOH 1005 A HOH 1006 4 HOH HOH 1006 A HOH 1007 4 HOH HOH 1007 A HOH 1008 4 HOH HOH 1008 A HOH 1009 4 HOH HOH 1009 A HOH 1010 4 HOH HOH 1010 A HOH 1011 4 HOH HOH 1011 A HOH 1012 4 HOH HOH 1012 A HOH 1013 4 HOH HOH 1013 A HOH 1014 4 HOH HOH 1014 A HOH 1015 4 HOH HOH 1015 A HOH 1016 4 HOH HOH 1016 A HOH 1017 4 HOH HOH 1017 A HOH 1018 4 HOH HOH 1018 A HOH 1019 4 HOH HOH 1019 A HOH 1020 4 HOH HOH 1020 A HOH 1021 4 HOH HOH 1021 A HOH 1022 4 HOH HOH 1022 A HOH 1023 4 HOH HOH 1023 A HOH 1024 4 HOH HOH 1024 A HOH 1025 4 HOH HOH 1025 A HOH 1026 4 HOH HOH 1026 A HOH 1027 4 HOH HOH 1027 A HOH 1028 4 HOH HOH 1028 A HOH 1029 4 HOH HOH 1029 A HOH 1030 4 HOH HOH 1030 A HOH 1031 4 HOH HOH 1031 A HOH 1032 4 HOH HOH 1032 A HOH 1033 4 HOH HOH 1033 A HOH 1034 4 HOH HOH 1034 A HOH 1035 4 HOH HOH 1035 A HOH 1036 4 HOH HOH 1036 A HOH 1037 4 HOH HOH 1037 A HOH 1038 4 HOH HOH 1038 A HOH 1039 4 HOH HOH 1039 A HOH 1040 4 HOH HOH 1040 A HOH 1041 4 HOH HOH 1041 A HOH 1042 4 HOH HOH 1042 A HOH 1043 4 HOH HOH 1043 A HOH 1044 4 HOH HOH 1044 A HOH 1045 4 HOH HOH 1045 A HOH 1046 4 HOH HOH 1046 A HOH 1047 4 HOH HOH 1047 A HOH 1048 4 HOH HOH 1048 A HOH 1049 4 HOH HOH 1049 A HOH 1050 4 HOH HOH 1050 A HOH 1051 4 HOH HOH 1051 A HOH 1052 4 HOH HOH 1052 A HOH 1053 4 HOH HOH 1053 A HOH 1054 4 HOH HOH 1054 A HOH 1055 4 HOH HOH 1055 A HOH 1056 4 HOH HOH 1056 A HOH 1057 4 HOH HOH 1057 A HOH 1058 4 HOH HOH 1058 A HOH 1059 4 HOH HOH 1059 A HOH 1060 4 HOH HOH 1060 A HOH 1061 4 HOH HOH 1061 A HOH 1062 4 HOH HOH 1062 A HOH 1063 4 HOH HOH 1063 A HOH 1064 4 HOH HOH 1064 A HOH 1065 4 HOH HOH 1065 A HOH 1066 4 HOH HOH 1066 A HOH 1067 4 HOH HOH 1067 A HOH 1068 4 HOH HOH 1068 A HOH 1069 4 HOH HOH 1069 A HOH 1070 4 HOH HOH 1070 A HOH 1071 4 HOH HOH 1071 A HOH 1072 4 HOH HOH 1072 A HOH 1073 4 HOH HOH 1073 A HOH 1074 4 HOH HOH 1074 A HOH 1075 4 HOH HOH 1075 A HOH 1076 4 HOH HOH 1076 A HOH 1077 4 HOH HOH 1077 A HOH 1078 4 HOH HOH 1078 A HOH 1079 4 HOH HOH 1079 A HOH 1080 4 HOH HOH 1080 A HOH 1081 4 HOH HOH 1081 A HOH 1082 4 HOH HOH 1082 A HOH 1083 4 HOH HOH 1083 A HOH 1084 4 HOH HOH 1084 A HOH 1085 4 HOH HOH 1085 A HOH 1086 4 HOH HOH 1086 A HOH 1087 4 HOH HOH 1087 A HOH 1088 4 HOH HOH 1088 A HOH 1089 4 HOH HOH 1089 A HOH 1090 4 HOH HOH 1090 A HOH 1091 4 HOH HOH 1091 A HOH 1092 4 HOH HOH 1092 A HOH 1093 4 HOH HOH 1093 A HOH 1094 4 HOH HOH 1094 A HOH 1095 4 HOH HOH 1095 A HOH 1096 4 HOH HOH 1096 A HOH 1097 4 HOH HOH 1097 A HOH 1098 4 HOH HOH 1098 A HOH 1099 4 HOH HOH 1099 A HOH 1100 4 HOH HOH 1100 A HOH 1101 4 HOH HOH 1101 A HOH 1102 4 HOH HOH 1102 A HOH 1103 4 HOH HOH 1103 A HOH 1104 4 HOH HOH 1104 A HOH 1105 4 HOH HOH 1105 A HOH 1106 4 HOH HOH 1106 A HOH 1107 4 HOH HOH 1107 A HOH 1108 4 HOH HOH 1108 A HOH 1109 4 HOH HOH 1109 A HOH 1110 4 HOH HOH 1110 A HOH 1111 4 HOH HOH 1111 A HOH 1112 4 HOH HOH 1112 A HOH 1113 4 HOH HOH 1113 A HOH 1114 4 HOH HOH 1114 A HOH 1115 4 HOH HOH 1115 A HOH 1116 4 HOH HOH 1116 A HOH 1117 4 HOH HOH 1117 A HOH 1118 4 HOH HOH 1118 A HOH 1119 4 HOH HOH 1119 A HOH 1120 4 HOH HOH 1120 A HOH 1121 4 HOH HOH 1121 A HOH 1122 4 HOH HOH 1122 A HOH 1123 4 HOH HOH 1123 A HOH 1124 4 HOH HOH 1124 A HOH 1125 4 HOH HOH 1125 A HOH 1126 4 HOH HOH 1126 A HOH 1127 4 HOH HOH 1127 A HOH 1128 4 HOH HOH 1128 A HOH 1129 4 HOH HOH 1129 A HOH 1130 4 HOH HOH 1130 A n 1 1 A n 2 2 A n 3 3 A n 4 4 A n 5 5 A n 6 6 A n 7 7 A n 8 8 A n 9 9 A n 10 10 A n 11 11 A n 12 12 A n 13 13 A GLU 14 n 14 GLU 14 A LYS 15 n 15 LYS 15 A GLU 16 n 16 GLU 16 A LEU 17 n 17 LEU 17 A TYR 18 n 18 TYR 18 A GLU 19 n 19 GLU 19 A LYS 20 n 20 LYS 20 A TRP 21 n 21 TRP 21 A MET 22 n 22 MET 22 A ARG 23 n 23 ARG 23 A THR 24 n 24 THR 24 A VAL 25 n 25 VAL 25 A GLU 26 n 26 GLU 26 A MET 27 n 27 MET 27 A LEU 28 n 28 LEU 28 A LYS 29 n 29 LYS 29 A ALA 30 n 30 ALA 30 A GLU 31 n 31 GLU 31 A GLY 32 n 32 GLY 32 A ILE 33 n 33 ILE 33 A ILE 34 n 34 ILE 34 A ARG 35 n 35 ARG 35 A SER 36 n 36 SER 36 A LYS 37 n 37 LYS 37 A GLU 38 n 38 GLU 38 A VAL 39 n 39 VAL 39 A GLU 40 n 40 GLU 40 A ARG 41 n 41 ARG 41 A ALA 42 n 42 ALA 42 A PHE 43 n 43 PHE 43 A LEU 44 n 44 LEU 44 A LYS 45 n 45 LYS 45 A TYR 46 n 46 TYR 46 A PRO 47 n 47 PRO 47 A ARG 48 n 48 ARG 48 A TYR 49 n 49 TYR 49 A LEU 50 n 50 LEU 50 A SER 51 n 51 SER 51 A VAL 52 n 52 VAL 52 A GLU 53 n 53 GLU 53 A ASP 54 n 54 ASP 54 A LYS 55 n 55 LYS 55 A TYR 56 n 56 TYR 56 A LYS 57 n 57 LYS 57 A LYS 58 n 58 LYS 58 A TYR 59 n 59 TYR 59 A ALA 60 n 60 ALA 60 A HIS 61 n 61 HIS 61 A ILE 62 n 62 ILE 62 A ASP 63 n 63 ASP 63 A GLU 64 n 64 GLU 64 A PRO 65 n 65 PRO 65 A LEU 66 n 66 LEU 66 A PRO 67 n 67 PRO 67 A ILE 68 n 68 ILE 68 A PRO 69 n 69 PRO 69 A ALA 70 n 70 ALA 70 A GLY 71 n 71 GLY 71 A GLN 72 n 72 GLN 72 A THR 73 n 73 THR 73 A VAL 74 n 74 VAL 74 A SER 75 n 75 SER 75 A ALA 76 n 76 ALA 76 A PRO 77 n 77 PRO 77 A HIS 78 n 78 HIS 78 A MET 79 n 79 MET 79 A VAL 80 n 80 VAL 80 A ALA 81 n 81 ALA 81 A ILE 82 n 82 ILE 82 A MET 83 n 83 MET 83 A LEU 84 n 84 LEU 84 A GLU 85 n 85 GLU 85 A ILE 86 n 86 ILE 86 A ALA 87 n 87 ALA 87 A ASN 88 n 88 ASN 88 A LEU 89 n 89 LEU 89 A LYS 90 n 90 LYS 90 A PRO 91 n 91 PRO 91 A GLY 92 n 92 GLY 92 A MET 93 n 93 MET 93 A ASN 94 n 94 ASN 94 A ILE 95 n 95 ILE 95 A LEU 96 n 96 LEU 96 A GLU 97 n 97 GLU 97 A VAL 98 n 98 VAL 98 A GLY 99 n 99 GLY 99 A THR 100 n 100 THR 100 A GLY 101 n 101 GLY 101 A SER 102 n 102 SER 102 A GLY 103 n 103 GLY 103 A TRP 104 n 104 TRP 104 A ASN 105 n 105 ASN 105 A ALA 106 n 106 ALA 106 A ALA 107 n 107 ALA 107 A LEU 108 n 108 LEU 108 A ILE 109 n 109 ILE 109 A SER 110 n 110 SER 110 A GLU 111 n 111 GLU 111 A ILE 112 n 112 ILE 112 A VAL 113 n 113 VAL 113 A LYS 114 n 114 LYS 114 A THR 115 n 115 THR 115 A ASP 116 n 116 ASP 116 A VAL 117 n 117 VAL 117 A TYR 118 n 118 TYR 118 A THR 119 n 119 THR 119 A ILE 120 n 120 ILE 120 A GLU 121 n 121 GLU 121 A ARG 122 n 122 ARG 122 A ILE 123 n 123 ILE 123 A PRO 124 n 124 PRO 124 A GLU 125 n 125 GLU 125 A LEU 126 n 126 LEU 126 A VAL 127 n 127 VAL 127 A GLU 128 n 128 GLU 128 A PHE 129 n 129 PHE 129 A ALA 130 n 130 ALA 130 A LYS 131 n 131 LYS 131 A ARG 132 n 132 ARG 132 A ASN 133 n 133 ASN 133 A LEU 134 n 134 LEU 134 A GLU 135 n 135 GLU 135 A ARG 136 n 136 ARG 136 A ALA 137 n 137 ALA 137 A GLY 138 n 138 GLY 138 A VAL 139 n 139 VAL 139 A LYS 140 n 140 LYS 140 A ASN 141 n 141 ASN 141 A VAL 142 n 142 VAL 142 A HIS 143 n 143 HIS 143 A VAL 144 n 144 VAL 144 A ILE 145 n 145 ILE 145 A LEU 146 n 146 LEU 146 A GLY 147 n 147 GLY 147 A ASP 148 n 148 ASP 148 A GLY 149 n 149 GLY 149 A SER 150 n 150 SER 150 A LYS 151 n 151 LYS 151 A GLY 152 n 152 GLY 152 A PHE 153 n 153 PHE 153 A PRO 154 n 154 PRO 154 A PRO 155 n 155 PRO 155 A LYS 156 n 156 LYS 156 A ALA 157 n 157 ALA 157 A PRO 158 n 158 PRO 158 A TYR 159 n 159 TYR 159 A ASP 160 n 160 ASP 160 A VAL 161 n 161 VAL 161 A ILE 162 n 162 ILE 162 A ILE 163 n 163 ILE 163 A VAL 164 n 164 VAL 164 A THR 165 n 165 THR 165 A ALA 166 n 166 ALA 166 A GLY 167 n 167 GLY 167 A ALA 168 n 168 ALA 168 A PRO 169 n 169 PRO 169 A LYS 170 n 170 LYS 170 A ILE 171 n 171 ILE 171 A PRO 172 n 172 PRO 172 A GLU 173 n 173 GLU 173 A PRO 174 n 174 PRO 174 A LEU 175 n 175 LEU 175 A ILE 176 n 176 ILE 176 A GLU 177 n 177 GLU 177 A GLN 178 n 178 GLN 178 A LEU 179 n 179 LEU 179 A LYS 180 n 180 LYS 180 A ILE 181 n 181 ILE 181 A GLY 182 n 182 GLY 182 A GLY 183 n 183 GLY 183 A LYS 184 n 184 LYS 184 A LEU 185 n 185 LEU 185 A ILE 186 n 186 ILE 186 A ILE 187 n 187 ILE 187 A PRO 188 n 188 PRO 188 A VAL 189 n 189 VAL 189 A GLY 190 n 190 GLY 190 A SER 191 n 191 SER 191 A TYR 192 n 192 TYR 192 A HIS 193 n 193 HIS 193 A LEU 194 n 194 LEU 194 A TRP 195 n 195 TRP 195 A GLN 196 n 196 GLN 196 A GLU 197 n 197 GLU 197 A LEU 198 n 198 LEU 198 A LEU 199 n 199 LEU 199 A GLU 200 n 200 GLU 200 A VAL 201 n 201 VAL 201 A ARG 202 n 202 ARG 202 A LYS 203 n 203 LYS 203 A THR 204 n 204 THR 204 A LYS 205 n 205 LYS 205 A ASP 206 n 206 ASP 206 A GLY 207 n 207 GLY 207 A ILE 208 n 208 ILE 208 A LYS 209 n 209 LYS 209 A ILE 210 n 210 ILE 210 A LYS 211 n 211 LYS 211 A ASN 212 n 212 ASN 212 A HIS 213 n 213 HIS 213 A GLY 214 n 214 GLY 214 A GLY 215 n 215 GLY 215 A VAL 216 n 216 VAL 216 A ALA 217 n 217 ALA 217 A PHE 218 n 218 PHE 218 A VAL 219 n 219 VAL 219 A PRO 220 n 220 PRO 220 A LEU 221 n 221 LEU 221 A ILE 222 n 222 ILE 222 A GLY 223 n 223 GLY 223 A GLU 224 n 224 GLU 224 A TYR 225 n 225 TYR 225 A GLY 226 n 226 GLY 226 A TRP 227 n 227 TRP 227 A LYS 228 n 228 LYS 228 A n 229 229 A n 230 230 A n 231 231 A n 232 232 A n 233 233 A n 234 234 A n 235 235 A author_defined_assembly 1 monomeric A HOH 1124 D O HOH 1_555 A NA 236 B NA NA 1_555 A HOH 1126 D O HOH 1_555 96.0 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N LEU 66 A N LEU 66 A O VAL 74 A O VAL 74 A O ILE 145 A O ILE 145 A N THR 119 A N THR 119 A O TYR 118 A O TYR 118 A N GLU 97 A N GLU 97 A N VAL 98 A N VAL 98 A O ILE 163 A O ILE 163 A N ILE 162 A N ILE 162 A O ILE 186 A O ILE 186 A N LEU 185 A N LEU 185 A O VAL 201 A O VAL 201 A N ARG 202 A N ARG 202 A O LYS 209 A O LYS 209 1 A CG GLU 19 A CG GLU 19 0 Y 1 A CD GLU 19 A CD GLU 19 0 Y 1 A OE1 GLU 19 A OE1 GLU 19 0 Y 1 A OE2 GLU 19 A OE2 GLU 19 0 Y 1 A NE ARG 23 A NE ARG 23 0 Y 1 A CZ ARG 23 A CZ ARG 23 0 Y 1 A NH1 ARG 23 A NH1 ARG 23 0 Y 1 A NH2 ARG 23 A NH2 ARG 23 0 Y 1 A CD ARG 41 A CD ARG 41 0 Y 1 A NE ARG 41 A NE ARG 41 0 Y 1 A CZ ARG 41 A CZ ARG 41 0 Y 1 A NH1 ARG 41 A NH1 ARG 41 0 Y 1 A NH2 ARG 41 A NH2 ARG 41 0 Y 1 A CG ARG 132 A CG ARG 132 0 Y 1 A CD ARG 132 A CD ARG 132 0 Y 1 A NE ARG 132 A NE ARG 132 0 Y 1 A CZ ARG 132 A CZ ARG 132 0 Y 1 A NH1 ARG 132 A NH1 ARG 132 0 Y 1 A NH2 ARG 132 A NH2 ARG 132 0 Y 1 A OE1 GLU 135 A OE1 GLU 135 0 Y 1 A OE2 GLU 135 A OE2 GLU 135 0 Y 1 A CD LYS 205 A CD LYS 205 0 Y 1 A CE LYS 205 A CE LYS 205 0 Y 1 A NZ LYS 205 A NZ LYS 205 0 Y 1 A CD LYS 211 A CD LYS 211 0 Y 1 A CE LYS 211 A CE LYS 211 0 Y 1 A NZ LYS 211 A NZ LYS 211 0 Y 1 A CG ASN 212 A CG ASN 212 0 Y 1 A OD1 ASN 212 A OD1 ASN 212 0 Y 1 A ND2 ASN 212 A ND2 ASN 212 0 Y 1 A MET 1 A MET 1 1 Y 1 A HIS 2 A HIS 2 1 Y 1 A LEU 3 A LEU 3 1 Y 1 A TYR 4 A TYR 4 1 Y 1 A SER 5 A SER 5 1 Y 1 A SER 6 A SER 6 1 Y 1 A ASP 7 A ASP 7 1 Y 1 A PHE 8 A PHE 8 1 Y 1 A PRO 9 A PRO 9 1 Y 1 A LEU 10 A LEU 10 1 Y 1 A MET 11 A MET 11 1 Y 1 A MET 12 A MET 12 1 Y 1 A ASP 13 A ASP 13 1 Y 1 A GLU 229 A GLU 229 1 Y 1 A HIS 230 A HIS 230 1 Y 1 A HIS 231 A HIS 231 1 Y 1 A HIS 232 A HIS 232 1 Y 1 A HIS 233 A HIS 233 1 Y 1 A HIS 234 A HIS 234 1 Y 1 A HIS 235 A HIS 235 1 Y 1 A PHE 153 -153.72 82.08 -8.411 0.000 0.000 3.067 0.000 5.344 0.2360000 0.2210000 0.2290000 0.2290000 1.50 500 1517 30345 30345 5.0 random 1 THROUGHOUT 0 0 MOLECULAR REPLACEMENT Engh & Huber 1.50 500 130 1848 20 0 1698 0.005 1.4 1.013 1.5 1.821 2.0 1.458 2.0 2.605 2.5 1.5 500 1JG2 30345 30345 0.0 0.0 0.0730000 1 95.3 0.4580000 1.50 1.55 95.3 refinement CNS data reduction DENZO data scaling SCALEPACK phasing CNS Crystal Structure of L-isoaspartyl (D-aspartyl) O-methyltransferase with adenosine 1 N N 2 N N 3 N N 4 N N A GLU 14 A GLU 14 HELX_P A GLU 31 A GLU 31 1 1 18 A SER 36 A SER 36 HELX_P A TYR 46 A TYR 46 1 2 11 A PRO 47 A PRO 47 HELX_P A VAL 52 A VAL 52 5 3 6 A GLU 53 A GLU 53 HELX_P A ALA 60 A ALA 60 5 4 8 A ALA 76 A ALA 76 HELX_P A ASN 88 A ASN 88 1 5 13 A GLY 103 A GLY 103 HELX_P A LYS 114 A LYS 114 1 6 12 A ILE 123 A ILE 123 HELX_P A ALA 137 A ALA 137 1 7 15 A ASP 148 A ASP 148 HELX_P A GLY 152 A GLY 152 5 8 5 A PHE 153 A PHE 153 HELX_P A ALA 157 A ALA 157 5 9 5 A PRO 172 A PRO 172 HELX_P A GLN 178 A GLN 178 1 10 7 metalc 2.804 A NA 236 B NA NA 1_555 A HOH 1124 D O HOH 1_555 metalc 2.776 A NA 236 B NA NA 1_555 A HOH 1126 D O HOH 1_555 TRANSFERASE Rossman methyltransferase, PROTEIN REPAIR ISOMERIZATION, TRANSFERASE A ALA 157 A ALA 157 1 A PRO 158 A PRO 158 -0.03 PIMT_PYRFU UNP 1 1 Q8TZR3 1 219 1JG2 11 229 Q8TZR3 A 1 11 229 2 7 anti-parallel parallel parallel parallel parallel anti-parallel anti-parallel A LEU 66 A LEU 66 A PRO 67 A PRO 67 A THR 73 A THR 73 A VAL 74 A VAL 74 A VAL 142 A VAL 142 A LEU 146 A LEU 146 A VAL 117 A VAL 117 A GLU 121 A GLU 121 A ILE 95 A ILE 95 A VAL 98 A VAL 98 A TYR 159 A TYR 159 A VAL 164 A VAL 164 A LEU 179 A LEU 179 A VAL 189 A VAL 189 A GLN 196 A GLN 196 A THR 204 A THR 204 A GLY 207 A GLY 207 A VAL 216 A VAL 216 BINDING SITE FOR RESIDUE NA A 236 A NA 236 Software 5 BINDING SITE FOR RESIDUE ADN A 500 A ADN 500 Software 17 A SER 102 A SER 102 5 1_555 A TRP 104 A TRP 104 5 1_555 A ASN 105 A ASN 105 5 1_555 A HOH 1124 D HOH 5 1_555 A HOH 1126 D HOH 5 1_555 A GLN 72 A GLN 72 17 1_555 A GLY 99 A GLY 99 17 1_555 A GLY 101 A GLY 101 17 1_555 A ILE 120 A ILE 120 17 1_555 A GLU 121 A GLU 121 17 1_555 A ARG 122 A ARG 122 17 1_555 A ILE 123 A ILE 123 17 1_555 A LEU 126 A LEU 126 17 1_555 A GLY 147 A GLY 147 17 1_555 A ASP 148 A ASP 148 17 1_555 A GLY 149 A GLY 149 17 1_555 A THR 165 A THR 165 17 1_555 A PRO 220 A PRO 220 17 1_555 A LEU 221 A LEU 221 17 1_555 A ILE 222 A ILE 222 17 1_555 A HOH 1096 D HOH 17 1_555 A HOH 1128 D HOH 17 1_555 19 orthorhombic P 21 21 21