0.025315 -0.000000 0.000000 0.000000 0.018975 0.000000 0.000000 0.000000 0.010231 0.00000 0.00000 0.00000 Griffith, S.C. Sawaya, M.R. Boutz, D. Thapar, N. Katz, J. Clarke, S. Yeates, T.O. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 39.502 52.701 97.739 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C15 H22 N6 O5 S 398.437 S-ADENOSYLMETHIONINE non-polymer C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C Y 128 N C Y 129 N N Y 130 N C Y 131 N C Y 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N H N 146 N H N 147 N N N 148 S C N 149 N C N 150 N O N 151 S C N 152 N C N 153 N C N 154 N C N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N N N 170 S C N 171 N C N 172 N O N 173 N C N 174 N C N 175 N C N 176 N C N 177 N O N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N N N 192 S C N 193 N C N 194 N O N 195 N C N 196 N C N 197 N C N 198 N C N 199 N N N 200 N O N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N N N 217 S C N 218 N C N 219 N O N 220 N C N 221 N C N 222 N S N 223 N C N 224 N O N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N N N 237 S C N 238 N C N 239 N O N 240 N C Y 241 N C Y 242 N C Y 243 N C Y 244 N C Y 245 N C Y 246 N C N 247 N O N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N N N 260 S C N 261 N C N 262 N O N 263 N C N 264 N C N 265 N C N 266 N O N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N N N 277 S C N 278 N C N 279 N O N 280 N O N 281 N C N 282 N C N 283 S S N 284 N C N 285 N C N 286 S C N 287 N O N 288 S C N 289 N O N 290 R C N 291 N O N 292 R C Y 293 N N Y 294 N C Y 295 N N Y 296 N C Y 297 N C N 298 N N Y 299 N N Y 300 N C Y 301 N N Y 302 N C N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N N N 326 S C N 327 N C N 328 N O N 329 N C N 330 N O N 331 N O N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N N N 340 S C N 341 N C N 342 N O N 343 R C N 344 N O N 345 N C N 346 N O N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N N N 357 S C N 358 N C N 359 N O N 360 N C Y 361 N C Y 362 N C Y 363 N C Y 364 N N Y 365 N C Y 366 N C Y 367 N C Y 368 N C Y 369 N C N 370 N O N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N N N 384 S C N 385 N C N 386 N O N 387 N C Y 388 N C Y 389 N C Y 390 N C Y 391 N C Y 392 N C Y 393 N C N 394 N O N 395 N O N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N N N 408 S C N 409 N C N 410 N O N 411 N C N 412 N C N 413 N C N 414 N O N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing Y 235 N doub Y 236 N sing Y 237 N sing N 238 N sing Y 239 N doub N 240 N sing Y 241 N doub N 242 N sing Y 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N doub N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N doub N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing Y 300 N sing Y 301 N sing Y 302 N doub N 303 N sing Y 304 N sing Y 305 N sing Y 306 N doub N 307 N sing Y 308 N doub N 309 N sing N 310 N sing Y 311 N sing Y 312 N doub N 313 N sing Y 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N doub N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N doub N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N doub N 351 N sing N 352 N sing N 353 N sing N 354 N sing Y 355 N doub Y 356 N sing Y 357 N sing N 358 N sing Y 359 N doub Y 360 N sing Y 361 N sing N 362 N sing Y 363 N sing Y 364 N doub N 365 N sing Y 366 N doub N 367 N sing Y 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N doub N 379 N sing N 380 N sing N 381 N sing N 382 N sing Y 383 N doub Y 384 N sing Y 385 N sing N 386 N sing Y 387 N doub N 388 N sing Y 389 N doub N 390 N sing Y 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N doub N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing UK J.Mol.Biol. JMOBAK 0070 0022-2836 313 1103 1116 10.1006/jmbi.2001.5095 11700066 Crystal structure of a protein repair methyltransferase from Pyrococcus furiosus with its L-isoaspartyl peptide substrate. 2001 10.2210/pdb1jg4/pdb pdb_00001jg4 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 118 1 CCD 2000-10-01 ADSC QUANTUM 4 mirror SINGLE WAVELENGTH M x-ray 1 1.1000 1.0 X8C NSLS 1.1000 SYNCHROTRON NSLS BEAMLINE X8C 26613.090 protein-L-isoaspartate O-methyltransferase 2.1.1.77 1 man polymer 398.437 S-ADENOSYLMETHIONINE 1 syn non-polymer 18.015 water 177 nat water PROTEIN-BETA-ASPARTATE METHYLTRANSFERASE; PIMT; PROTEIN L-ISOASPARTYL METHYLTRANSFERASE; L-ISOASPARTYL PROTEIN CARBOXYL METHYLTRANSFERASE E.C.2.1.1.77 no no MHLYSSDFPLMMDEKELYEKWMRTVEMLKAEGIIRSKEVERAFLKYPRYLSVEDKYKKYAHIDEPLPIPAGQTVSAPHMV AIMLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPYD VIIVTAGAPKIPEPLIEQLKIGGKLIIPVGSYHLWQELLEVRKTKDGIKIKNHGGVAFVPLIGEYGWKEHHHHHH MHLYSSDFPLMMDEKELYEKWMRTVEMLKAEGIIRSKEVERAFLKYPRYLSVEDKYKKYAHIDEPLPIPAGQTVSAPHMV AIMLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPYD VIIVTAGAPKIPEPLIEQLKIGGKLIIPVGSYHLWQELLEVRKTKDGIKIKNHGGVAFVPLIGEYGWKEHHHHHH A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Pyrococcus Escherichia sample 2261 Pyrococcus furiosus 562 Escherichia coli 1 1.91 35.61 VAPOR DIFFUSION, HANGING DROP 4.5 25% PEG 2000, 15% Glycerol, 0.2 M Ammonium Acetate, pH 4.5, VAPOR DIFFUSION, HANGING DROP at 298K 298 chem_comp_atom chem_comp_bond database_2 struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 2001-11-16 1 1 2008-04-27 1 2 2011-07-13 1 3 2024-02-07 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2001-06-22 REL REL SAM S-ADENOSYLMETHIONINE HOH water SAM 500 2 SAM SAM 500 A HOH 1 3 HOH HOH 501 A HOH 2 3 HOH HOH 502 A HOH 3 3 HOH HOH 503 A HOH 4 3 HOH HOH 504 A HOH 7 3 HOH HOH 505 A HOH 8 3 HOH HOH 506 A HOH 9 3 HOH HOH 507 A HOH 11 3 HOH HOH 508 A HOH 13 3 HOH HOH 509 A HOH 14 3 HOH HOH 510 A HOH 15 3 HOH HOH 511 A HOH 19 3 HOH HOH 512 A HOH 21 3 HOH HOH 513 A HOH 22 3 HOH HOH 514 A HOH 23 3 HOH HOH 515 A HOH 24 3 HOH HOH 516 A HOH 25 3 HOH HOH 517 A HOH 26 3 HOH HOH 518 A HOH 27 3 HOH HOH 519 A HOH 29 3 HOH HOH 520 A HOH 30 3 HOH HOH 521 A HOH 31 3 HOH HOH 522 A HOH 32 3 HOH HOH 523 A HOH 33 3 HOH HOH 524 A HOH 34 3 HOH HOH 525 A HOH 35 3 HOH HOH 526 A HOH 36 3 HOH HOH 527 A HOH 37 3 HOH HOH 528 A HOH 38 3 HOH HOH 529 A HOH 39 3 HOH HOH 530 A HOH 40 3 HOH HOH 531 A HOH 41 3 HOH HOH 532 A HOH 43 3 HOH HOH 533 A HOH 44 3 HOH HOH 534 A HOH 45 3 HOH HOH 535 A HOH 46 3 HOH HOH 536 A HOH 47 3 HOH HOH 537 A HOH 48 3 HOH HOH 538 A HOH 49 3 HOH HOH 539 A HOH 50 3 HOH HOH 540 A HOH 51 3 HOH HOH 541 A HOH 53 3 HOH HOH 542 A HOH 54 3 HOH HOH 543 A HOH 55 3 HOH HOH 544 A HOH 56 3 HOH HOH 545 A HOH 57 3 HOH HOH 546 A HOH 58 3 HOH HOH 547 A HOH 60 3 HOH HOH 548 A HOH 61 3 HOH HOH 549 A HOH 62 3 HOH HOH 550 A HOH 63 3 HOH HOH 551 A HOH 64 3 HOH HOH 552 A HOH 65 3 HOH HOH 553 A HOH 66 3 HOH HOH 554 A HOH 67 3 HOH HOH 555 A HOH 68 3 HOH HOH 556 A HOH 69 3 HOH HOH 557 A HOH 70 3 HOH HOH 558 A HOH 71 3 HOH HOH 559 A HOH 72 3 HOH HOH 560 A HOH 73 3 HOH HOH 561 A HOH 74 3 HOH HOH 562 A HOH 76 3 HOH HOH 563 A HOH 77 3 HOH HOH 564 A HOH 78 3 HOH HOH 565 A HOH 79 3 HOH HOH 566 A HOH 80 3 HOH HOH 567 A HOH 81 3 HOH HOH 568 A HOH 83 3 HOH HOH 569 A HOH 84 3 HOH HOH 570 A HOH 85 3 HOH HOH 571 A HOH 86 3 HOH HOH 572 A HOH 88 3 HOH HOH 573 A HOH 89 3 HOH HOH 574 A HOH 90 3 HOH HOH 575 A HOH 91 3 HOH HOH 576 A HOH 92 3 HOH HOH 577 A HOH 95 3 HOH HOH 578 A HOH 96 3 HOH HOH 579 A HOH 97 3 HOH HOH 580 A HOH 99 3 HOH HOH 581 A HOH 100 3 HOH HOH 582 A HOH 101 3 HOH HOH 583 A HOH 102 3 HOH HOH 584 A HOH 103 3 HOH HOH 585 A HOH 104 3 HOH HOH 586 A HOH 105 3 HOH HOH 587 A HOH 108 3 HOH HOH 588 A HOH 109 3 HOH HOH 589 A HOH 110 3 HOH HOH 590 A HOH 111 3 HOH HOH 591 A HOH 112 3 HOH HOH 592 A HOH 113 3 HOH HOH 593 A HOH 115 3 HOH HOH 594 A HOH 116 3 HOH HOH 595 A HOH 117 3 HOH HOH 596 A HOH 118 3 HOH HOH 597 A HOH 119 3 HOH HOH 598 A HOH 120 3 HOH HOH 599 A HOH 121 3 HOH HOH 600 A HOH 122 3 HOH HOH 601 A HOH 124 3 HOH HOH 602 A HOH 125 3 HOH HOH 603 A HOH 127 3 HOH HOH 604 A HOH 128 3 HOH HOH 605 A HOH 129 3 HOH HOH 606 A HOH 130 3 HOH HOH 607 A HOH 131 3 HOH HOH 608 A HOH 132 3 HOH HOH 609 A HOH 133 3 HOH HOH 610 A HOH 134 3 HOH HOH 611 A HOH 135 3 HOH HOH 612 A HOH 140 3 HOH HOH 613 A HOH 141 3 HOH HOH 614 A HOH 143 3 HOH HOH 615 A HOH 144 3 HOH HOH 616 A HOH 146 3 HOH HOH 617 A HOH 147 3 HOH HOH 618 A HOH 148 3 HOH HOH 619 A HOH 149 3 HOH HOH 620 A HOH 150 3 HOH HOH 621 A HOH 151 3 HOH HOH 622 A HOH 152 3 HOH HOH 623 A HOH 153 3 HOH HOH 624 A HOH 155 3 HOH HOH 625 A HOH 156 3 HOH HOH 626 A HOH 157 3 HOH HOH 627 A HOH 158 3 HOH HOH 628 A HOH 159 3 HOH HOH 629 A HOH 160 3 HOH HOH 630 A HOH 161 3 HOH HOH 631 A HOH 162 3 HOH HOH 632 A HOH 163 3 HOH HOH 633 A HOH 164 3 HOH HOH 634 A HOH 165 3 HOH HOH 635 A HOH 166 3 HOH HOH 636 A HOH 167 3 HOH HOH 637 A HOH 169 3 HOH HOH 638 A HOH 170 3 HOH HOH 639 A HOH 172 3 HOH HOH 640 A HOH 173 3 HOH HOH 641 A HOH 174 3 HOH HOH 642 A HOH 175 3 HOH HOH 643 A HOH 176 3 HOH HOH 644 A HOH 177 3 HOH HOH 645 A HOH 178 3 HOH HOH 646 A HOH 179 3 HOH HOH 647 A HOH 180 3 HOH HOH 648 A HOH 181 3 HOH HOH 649 A HOH 182 3 HOH HOH 650 A HOH 183 3 HOH HOH 651 A HOH 184 3 HOH HOH 652 A HOH 185 3 HOH HOH 653 A HOH 186 3 HOH HOH 654 A HOH 187 3 HOH HOH 655 A HOH 188 3 HOH HOH 656 A HOH 189 3 HOH HOH 657 A HOH 190 3 HOH HOH 658 A HOH 191 3 HOH HOH 659 A HOH 192 3 HOH HOH 660 A HOH 193 3 HOH HOH 661 A HOH 194 3 HOH HOH 662 A HOH 195 3 HOH HOH 663 A HOH 196 3 HOH HOH 664 A HOH 197 3 HOH HOH 665 A HOH 198 3 HOH HOH 666 A HOH 199 3 HOH HOH 667 A HOH 200 3 HOH HOH 668 A HOH 201 3 HOH HOH 669 A HOH 202 3 HOH HOH 670 A HOH 203 3 HOH HOH 671 A HOH 205 3 HOH HOH 672 A HOH 206 3 HOH HOH 673 A HOH 207 3 HOH HOH 674 A HOH 208 3 HOH HOH 675 A HOH 209 3 HOH HOH 676 A HOH 210 3 HOH HOH 677 A n 1 1 A n 2 2 A n 3 3 A n 4 4 A n 5 5 A n 6 6 A n 7 7 A n 8 8 A n 9 9 A n 10 10 A n 11 11 A n 12 12 A n 13 13 A GLU 14 n 14 GLU 14 A LYS 15 n 15 LYS 15 A GLU 16 n 16 GLU 16 A LEU 17 n 17 LEU 17 A TYR 18 n 18 TYR 18 A GLU 19 n 19 GLU 19 A LYS 20 n 20 LYS 20 A TRP 21 n 21 TRP 21 A MET 22 n 22 MET 22 A ARG 23 n 23 ARG 23 A THR 24 n 24 THR 24 A VAL 25 n 25 VAL 25 A GLU 26 n 26 GLU 26 A MET 27 n 27 MET 27 A LEU 28 n 28 LEU 28 A LYS 29 n 29 LYS 29 A ALA 30 n 30 ALA 30 A GLU 31 n 31 GLU 31 A GLY 32 n 32 GLY 32 A ILE 33 n 33 ILE 33 A ILE 34 n 34 ILE 34 A ARG 35 n 35 ARG 35 A SER 36 n 36 SER 36 A LYS 37 n 37 LYS 37 A GLU 38 n 38 GLU 38 A VAL 39 n 39 VAL 39 A GLU 40 n 40 GLU 40 A ARG 41 n 41 ARG 41 A ALA 42 n 42 ALA 42 A PHE 43 n 43 PHE 43 A LEU 44 n 44 LEU 44 A LYS 45 n 45 LYS 45 A TYR 46 n 46 TYR 46 A PRO 47 n 47 PRO 47 A ARG 48 n 48 ARG 48 A TYR 49 n 49 TYR 49 A LEU 50 n 50 LEU 50 A SER 51 n 51 SER 51 A VAL 52 n 52 VAL 52 A GLU 53 n 53 GLU 53 A ASP 54 n 54 ASP 54 A LYS 55 n 55 LYS 55 A TYR 56 n 56 TYR 56 A LYS 57 n 57 LYS 57 A LYS 58 n 58 LYS 58 A TYR 59 n 59 TYR 59 A ALA 60 n 60 ALA 60 A HIS 61 n 61 HIS 61 A ILE 62 n 62 ILE 62 A ASP 63 n 63 ASP 63 A GLU 64 n 64 GLU 64 A PRO 65 n 65 PRO 65 A LEU 66 n 66 LEU 66 A PRO 67 n 67 PRO 67 A ILE 68 n 68 ILE 68 A PRO 69 n 69 PRO 69 A ALA 70 n 70 ALA 70 A GLY 71 n 71 GLY 71 A GLN 72 n 72 GLN 72 A THR 73 n 73 THR 73 A VAL 74 n 74 VAL 74 A SER 75 n 75 SER 75 A ALA 76 n 76 ALA 76 A PRO 77 n 77 PRO 77 A HIS 78 n 78 HIS 78 A MET 79 n 79 MET 79 A VAL 80 n 80 VAL 80 A ALA 81 n 81 ALA 81 A ILE 82 n 82 ILE 82 A MET 83 n 83 MET 83 A LEU 84 n 84 LEU 84 A GLU 85 n 85 GLU 85 A ILE 86 n 86 ILE 86 A ALA 87 n 87 ALA 87 A ASN 88 n 88 ASN 88 A LEU 89 n 89 LEU 89 A LYS 90 n 90 LYS 90 A PRO 91 n 91 PRO 91 A GLY 92 n 92 GLY 92 A MET 93 n 93 MET 93 A ASN 94 n 94 ASN 94 A ILE 95 n 95 ILE 95 A LEU 96 n 96 LEU 96 A GLU 97 n 97 GLU 97 A VAL 98 n 98 VAL 98 A GLY 99 n 99 GLY 99 A THR 100 n 100 THR 100 A GLY 101 n 101 GLY 101 A SER 102 n 102 SER 102 A GLY 103 n 103 GLY 103 A TRP 104 n 104 TRP 104 A ASN 105 n 105 ASN 105 A ALA 106 n 106 ALA 106 A ALA 107 n 107 ALA 107 A LEU 108 n 108 LEU 108 A ILE 109 n 109 ILE 109 A SER 110 n 110 SER 110 A GLU 111 n 111 GLU 111 A ILE 112 n 112 ILE 112 A VAL 113 n 113 VAL 113 A LYS 114 n 114 LYS 114 A THR 115 n 115 THR 115 A ASP 116 n 116 ASP 116 A VAL 117 n 117 VAL 117 A TYR 118 n 118 TYR 118 A THR 119 n 119 THR 119 A ILE 120 n 120 ILE 120 A GLU 121 n 121 GLU 121 A ARG 122 n 122 ARG 122 A ILE 123 n 123 ILE 123 A PRO 124 n 124 PRO 124 A GLU 125 n 125 GLU 125 A LEU 126 n 126 LEU 126 A VAL 127 n 127 VAL 127 A GLU 128 n 128 GLU 128 A PHE 129 n 129 PHE 129 A ALA 130 n 130 ALA 130 A LYS 131 n 131 LYS 131 A ARG 132 n 132 ARG 132 A ASN 133 n 133 ASN 133 A LEU 134 n 134 LEU 134 A GLU 135 n 135 GLU 135 A ARG 136 n 136 ARG 136 A ALA 137 n 137 ALA 137 A GLY 138 n 138 GLY 138 A VAL 139 n 139 VAL 139 A LYS 140 n 140 LYS 140 A ASN 141 n 141 ASN 141 A VAL 142 n 142 VAL 142 A HIS 143 n 143 HIS 143 A VAL 144 n 144 VAL 144 A ILE 145 n 145 ILE 145 A LEU 146 n 146 LEU 146 A GLY 147 n 147 GLY 147 A ASP 148 n 148 ASP 148 A GLY 149 n 149 GLY 149 A SER 150 n 150 SER 150 A LYS 151 n 151 LYS 151 A GLY 152 n 152 GLY 152 A PHE 153 n 153 PHE 153 A PRO 154 n 154 PRO 154 A PRO 155 n 155 PRO 155 A LYS 156 n 156 LYS 156 A ALA 157 n 157 ALA 157 A PRO 158 n 158 PRO 158 A TYR 159 n 159 TYR 159 A ASP 160 n 160 ASP 160 A VAL 161 n 161 VAL 161 A ILE 162 n 162 ILE 162 A ILE 163 n 163 ILE 163 A VAL 164 n 164 VAL 164 A THR 165 n 165 THR 165 A ALA 166 n 166 ALA 166 A GLY 167 n 167 GLY 167 A ALA 168 n 168 ALA 168 A PRO 169 n 169 PRO 169 A LYS 170 n 170 LYS 170 A ILE 171 n 171 ILE 171 A PRO 172 n 172 PRO 172 A GLU 173 n 173 GLU 173 A PRO 174 n 174 PRO 174 A LEU 175 n 175 LEU 175 A ILE 176 n 176 ILE 176 A GLU 177 n 177 GLU 177 A GLN 178 n 178 GLN 178 A LEU 179 n 179 LEU 179 A LYS 180 n 180 LYS 180 A ILE 181 n 181 ILE 181 A GLY 182 n 182 GLY 182 A GLY 183 n 183 GLY 183 A LYS 184 n 184 LYS 184 A LEU 185 n 185 LEU 185 A ILE 186 n 186 ILE 186 A ILE 187 n 187 ILE 187 A PRO 188 n 188 PRO 188 A VAL 189 n 189 VAL 189 A GLY 190 n 190 GLY 190 A SER 191 n 191 SER 191 A TYR 192 n 192 TYR 192 A HIS 193 n 193 HIS 193 A LEU 194 n 194 LEU 194 A TRP 195 n 195 TRP 195 A GLN 196 n 196 GLN 196 A GLU 197 n 197 GLU 197 A LEU 198 n 198 LEU 198 A LEU 199 n 199 LEU 199 A GLU 200 n 200 GLU 200 A VAL 201 n 201 VAL 201 A ARG 202 n 202 ARG 202 A LYS 203 n 203 LYS 203 A THR 204 n 204 THR 204 A LYS 205 n 205 LYS 205 A ASP 206 n 206 ASP 206 A GLY 207 n 207 GLY 207 A ILE 208 n 208 ILE 208 A LYS 209 n 209 LYS 209 A ILE 210 n 210 ILE 210 A LYS 211 n 211 LYS 211 A ASN 212 n 212 ASN 212 A HIS 213 n 213 HIS 213 A GLY 214 n 214 GLY 214 A GLY 215 n 215 GLY 215 A VAL 216 n 216 VAL 216 A ALA 217 n 217 ALA 217 A PHE 218 n 218 PHE 218 A VAL 219 n 219 VAL 219 A PRO 220 n 220 PRO 220 A LEU 221 n 221 LEU 221 A ILE 222 n 222 ILE 222 A GLY 223 n 223 GLY 223 A GLU 224 n 224 GLU 224 A TYR 225 n 225 TYR 225 A GLY 226 n 226 GLY 226 A TRP 227 n 227 TRP 227 A LYS 228 n 228 LYS 228 A n 229 229 A n 230 230 A n 231 231 A n 232 232 A n 233 233 A n 234 234 A n 235 235 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N LEU 66 A N LEU 66 A O VAL 74 A O VAL 74 A O HIS 143 A O HIS 143 A N VAL 117 A N VAL 117 A O TYR 118 A O TYR 118 A N GLU 97 A N GLU 97 A N VAL 98 A N VAL 98 A O ILE 163 A O ILE 163 A N TYR 159 A N TYR 159 A O LYS 180 A O LYS 180 A N LEU 185 A N LEU 185 A O VAL 201 A O VAL 201 A N ARG 202 A N ARG 202 A O LYS 209 A O LYS 209 1 A CG GLU 19 A CG GLU 19 0 Y 1 A CD GLU 19 A CD GLU 19 0 Y 1 A OE1 GLU 19 A OE1 GLU 19 0 Y 1 A OE2 GLU 19 A OE2 GLU 19 0 Y 1 A CG GLU 26 A CG GLU 26 0 Y 1 A CD GLU 26 A CD GLU 26 0 Y 1 A OE1 GLU 26 A OE1 GLU 26 0 Y 1 A OE2 GLU 26 A OE2 GLU 26 0 Y 1 A CZ ARG 41 A CZ ARG 41 0 Y 1 A NH1 ARG 41 A NH1 ARG 41 0 Y 1 A NH2 ARG 41 A NH2 ARG 41 0 Y 1 A CZ ARG 132 A CZ ARG 132 0 Y 1 A NH1 ARG 132 A NH1 ARG 132 0 Y 1 A NH2 ARG 132 A NH2 ARG 132 0 Y 1 A CD GLU 135 A CD GLU 135 0 Y 1 A OE1 GLU 135 A OE1 GLU 135 0 Y 1 A OE2 GLU 135 A OE2 GLU 135 0 Y 1 A CD1 ILE 181 A CD1 ILE 181 0 Y 1 A CG ARG 202 A CG ARG 202 0 Y 1 A CD ARG 202 A CD ARG 202 0 Y 1 A NE ARG 202 A NE ARG 202 0 Y 1 A CZ ARG 202 A CZ ARG 202 0 Y 1 A NH1 ARG 202 A NH1 ARG 202 0 Y 1 A NH2 ARG 202 A NH2 ARG 202 0 Y 1 A CB LYS 205 A CB LYS 205 0 Y 1 A CG LYS 205 A CG LYS 205 0 Y 1 A CD LYS 205 A CD LYS 205 0 Y 1 A CE LYS 205 A CE LYS 205 0 Y 1 A NZ LYS 205 A NZ LYS 205 0 Y 1 A CG LYS 211 A CG LYS 211 0 Y 1 A CD LYS 211 A CD LYS 211 0 Y 1 A CE LYS 211 A CE LYS 211 0 Y 1 A NZ LYS 211 A NZ LYS 211 0 Y 1 A MET 1 A MET 1 1 Y 1 A HIS 2 A HIS 2 1 Y 1 A LEU 3 A LEU 3 1 Y 1 A TYR 4 A TYR 4 1 Y 1 A SER 5 A SER 5 1 Y 1 A SER 6 A SER 6 1 Y 1 A ASP 7 A ASP 7 1 Y 1 A PHE 8 A PHE 8 1 Y 1 A PRO 9 A PRO 9 1 Y 1 A LEU 10 A LEU 10 1 Y 1 A MET 11 A MET 11 1 Y 1 A MET 12 A MET 12 1 Y 1 A ASP 13 A ASP 13 1 Y 1 A GLU 229 A GLU 229 1 Y 1 A HIS 230 A HIS 230 1 Y 1 A HIS 231 A HIS 231 1 Y 1 A HIS 232 A HIS 232 1 Y 1 A HIS 233 A HIS 233 1 Y 1 A HIS 234 A HIS 234 1 Y 1 A HIS 235 A HIS 235 1 Y 1 A C4' SAM 500 PLANAR 1 A A CD OE2 ARG GLU 35 125 1.87 1_555 1_655 1 A A CD CD ARG GLU 35 125 1.91 1_555 1_655 1 A A CD OE1 ARG GLU 35 125 2.08 1_555 1_655 1 A A NE OE2 ARG GLU 35 125 2.09 1_555 1_655 1 A PHE 153 -153.85 83.11 0.2270000 0.2060000 1.5 500 1671 33412 33412 5. random 1 THROUGHOUT 0 0 MOLECULAR REPLACEMENT Engh & Huber 1.5 500 177 1901 27 0 1697 0.005 1.3 1.5 500 1JG4 33412 33412 0.0 0.0 0.0410000 0.0410000 1 99.6 0.3310000 1.50 1.55 99.9 refinement CNS data reduction DENZO data scaling SCALEPACK phasing CNS Crystal Structure of L-isoaspartyl (D-aspartyl) O-methyltransferase with S-adenosylmethionine 1 N N 2 N N 3 N N A GLU 14 A GLU 14 HELX_P A GLU 31 A GLU 31 1 1 18 A SER 36 A SER 36 HELX_P A TYR 46 A TYR 46 1 2 11 A PRO 47 A PRO 47 HELX_P A VAL 52 A VAL 52 5 3 6 A GLU 53 A GLU 53 HELX_P A ALA 60 A ALA 60 5 4 8 A PRO 69 A PRO 69 HELX_P A GLY 71 A GLY 71 5 5 3 A ALA 76 A ALA 76 HELX_P A ASN 88 A ASN 88 1 6 13 A GLY 103 A GLY 103 HELX_P A LYS 114 A LYS 114 1 7 12 A ILE 123 A ILE 123 HELX_P A ALA 137 A ALA 137 1 8 15 A ASP 148 A ASP 148 HELX_P A GLY 152 A GLY 152 5 9 5 A PHE 153 A PHE 153 HELX_P A ALA 157 A ALA 157 5 10 5 A PRO 172 A PRO 172 HELX_P A GLN 178 A GLN 178 1 11 7 TRANSFERASE Rossmann methyltransferase, PROTEIN REPAIR ISOMERIZATION, TRANSFERASE A ALA 157 A ALA 157 1 A PRO 158 A PRO 158 0.05 PIMT_PYRFU UNP 1 1 Q8TZR3 1 219 1JG4 11 229 Q8TZR3 A 1 11 229 2 7 anti-parallel parallel parallel parallel parallel anti-parallel anti-parallel A LEU 66 A LEU 66 A PRO 67 A PRO 67 A THR 73 A THR 73 A VAL 74 A VAL 74 A VAL 142 A VAL 142 A LEU 146 A LEU 146 A VAL 117 A VAL 117 A GLU 121 A GLU 121 A ILE 95 A ILE 95 A VAL 98 A VAL 98 A TYR 159 A TYR 159 A VAL 164 A VAL 164 A LEU 179 A LEU 179 A GLY 190 A GLY 190 A GLN 196 A GLN 196 A THR 204 A THR 204 A GLY 207 A GLY 207 A VAL 216 A VAL 216 BINDING SITE FOR RESIDUE SAM A 500 A SAM 500 Software 25 A GLN 72 A GLN 72 25 1_555 A THR 73 A THR 73 25 1_555 A GLU 97 A GLU 97 25 1_555 A GLY 99 A GLY 99 25 1_555 A THR 100 A THR 100 25 1_555 A GLY 101 A GLY 101 25 1_555 A SER 102 A SER 102 25 1_555 A TRP 104 A TRP 104 25 1_555 A ASN 105 A ASN 105 25 1_555 A ILE 120 A ILE 120 25 1_555 A GLU 121 A GLU 121 25 1_555 A ARG 122 A ARG 122 25 1_555 A ILE 123 A ILE 123 25 1_555 A LEU 126 A LEU 126 25 1_555 A GLY 147 A GLY 147 25 1_555 A ASP 148 A ASP 148 25 1_555 A GLY 149 A GLY 149 25 1_555 A THR 165 A THR 165 25 1_555 A VAL 219 A VAL 219 25 1_555 A PRO 220 A PRO 220 25 1_555 A LEU 221 A LEU 221 25 1_555 A ILE 222 A ILE 222 25 1_555 A HOH 516 C HOH 25 1_555 A HOH 607 C HOH 25 1_555 A HOH 610 C HOH 25 1_555 19 orthorhombic P 21 21 21