0.017301
0.009989
0.000000
0.000000
0.019978
0.000000
0.000000
0.000000
0.003545
0.00000
0.00000
0.00000
RESIDUES PRO L 8 AND PRO L 95 ARE CIS PROLINES.
Chitarra, V.
Alzari, P.M.
Bentley, G.A.
Bhat, T.N.
Eisele, J.-L.
Poljak, R.J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
57.800
57.800
282.100
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
90
7711
7715
10.1073/pnas.90.16.7711
8356074
Three-dimensional structure of a heteroclitic antigen-antibody cross-reaction complex.
1993
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
x-ray
1
1.0
11841.174
IGG1-KAPPA D11.15 FV (LIGHT CHAIN)
1
man
polymer
13004.309
IGG1-KAPPA D11.15 FV (HEAVY CHAIN)
1
man
polymer
14276.205
PHEASANT EGG WHITE LYSOZYME
1
man
polymer
no
no
DIELTQSPSYLVASPGETITINCRASKSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSGSGTDFTLTISSLEP
EDFAMYICQQHNEYPWTFGGGTKLEIKR
DIELTQSPSYLVASPGETITINCRASKSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSGSGTDFTLTISSLEP
EDFAMYICQQHNEYPWTFGGGTKLEIKR
L
polypeptide(L)
no
no
QVQLQQSGAELVRPGASVKLSCKASGYTFISYWINWVKQRPGQGLEWIGNIYPSDSYTNYNQKFKDKATLTVDKSSSTAY
MQLSSPTSEDSAVYYCTRDDNYGAMDYWGQGTTVTV
QVQLQQSGAELVRPGASVKLSCKASGYTFISYWINWVKQRPGQGLEWIGNIYPSDSYTNYNQKFKDKATLTVDKSSSTAY
MQLSSPTSEDSAVYYCTRDDNYGAMDYWGQGTTVTV
H
polypeptide(L)
no
no
KVYGRCELAAAMKRMGLDNYRGYSLGNWVCAAKFESNFNTGATNRNTDGSTDYGILQINSRWWCNDGRTPGSKNLCHIPC
SALLSSDITASVNCAKKIVSDGDGMNAWVAWRKHCKGTDVNVWIRGCRL
KVYGRCELAAAMKRMGLDNYRGYSLGNWVCAAKFESNFNTGATNRNTDGSTDYGILQINSRWWCNDGRTPGSKNLCHIPC
SALLSSDITASVNCAKKIVSDGDGMNAWVAWRKHCKGTDVNVWIRGCRL
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
house mouse
Mus
sample
10090
Mus musculus
house mouse
Mus
sample
10090
Mus musculus
ring-necked pheasant
Phasianus
sample
9054
Phasianus colchicus
3.48
64.61
repository
Initial release
Version format compliance
Version format compliance
1
0
1994-01-31
1
1
2008-03-24
1
2
2011-07-13
Y
1993-05-04
REL
ASP
1
n
1
ASP
1
L
ILE
2
n
2
ILE
2
L
GLU
3
n
3
GLU
3
L
LEU
4
n
4
LEU
4
L
THR
5
n
5
THR
5
L
GLN
6
n
6
GLN
6
L
SER
7
n
7
SER
7
L
PRO
8
n
8
PRO
8
L
SER
9
n
9
SER
9
L
TYR
10
n
10
TYR
10
L
LEU
11
n
11
LEU
11
L
VAL
12
n
12
VAL
12
L
ALA
13
n
13
ALA
13
L
SER
14
n
14
SER
14
L
PRO
15
n
15
PRO
15
L
GLY
16
n
16
GLY
16
L
GLU
17
n
17
GLU
17
L
THR
18
n
18
THR
18
L
ILE
19
n
19
ILE
19
L
THR
20
n
20
THR
20
L
ILE
21
n
21
ILE
21
L
ASN
22
n
22
ASN
22
L
CYS
23
n
23
CYS
23
L
ARG
24
n
24
ARG
24
L
ALA
25
n
25
ALA
25
L
SER
26
n
26
SER
26
L
LYS
27
n
27
LYS
27
L
SER
28
n
28
SER
28
L
ILE
29
n
29
ILE
29
L
SER
30
n
30
SER
30
L
LYS
31
n
31
LYS
31
L
SER
32
n
32
SER
32
L
LEU
33
n
33
LEU
33
L
ALA
34
n
34
ALA
34
L
TRP
35
n
35
TRP
35
L
TYR
36
n
36
TYR
36
L
GLN
37
n
37
GLN
37
L
GLU
38
n
38
GLU
38
L
LYS
39
n
39
LYS
39
L
PRO
40
n
40
PRO
40
L
GLY
41
n
41
GLY
41
L
LYS
42
n
42
LYS
42
L
THR
43
n
43
THR
43
L
ASN
44
n
44
ASN
44
L
ASN
45
n
45
ASN
45
L
LEU
46
n
46
LEU
46
L
LEU
47
n
47
LEU
47
L
ILE
48
n
48
ILE
48
L
TYR
49
n
49
TYR
49
L
SER
50
n
50
SER
50
L
GLY
51
n
51
GLY
51
L
SER
52
n
52
SER
52
L
THR
53
n
53
THR
53
L
LEU
54
n
54
LEU
54
L
GLN
55
n
55
GLN
55
L
SER
56
n
56
SER
56
L
GLY
57
n
57
GLY
57
L
ILE
58
n
58
ILE
58
L
PRO
59
n
59
PRO
59
L
SER
60
n
60
SER
60
L
ARG
61
n
61
ARG
61
L
PHE
62
n
62
PHE
62
L
SER
63
n
63
SER
63
L
GLY
64
n
64
GLY
64
L
SER
65
n
65
SER
65
L
GLY
66
n
66
GLY
66
L
SER
67
n
67
SER
67
L
GLY
68
n
68
GLY
68
L
THR
69
n
69
THR
69
L
ASP
70
n
70
ASP
70
L
PHE
71
n
71
PHE
71
L
THR
72
n
72
THR
72
L
LEU
73
n
73
LEU
73
L
THR
74
n
74
THR
74
L
ILE
75
n
75
ILE
75
L
SER
76
n
76
SER
76
L
SER
77
n
77
SER
77
L
LEU
78
n
78
LEU
78
L
GLU
79
n
79
GLU
79
L
PRO
80
n
80
PRO
80
L
GLU
81
n
81
GLU
81
L
ASP
82
n
82
ASP
82
L
PHE
83
n
83
PHE
83
L
ALA
84
n
84
ALA
84
L
MET
85
n
85
MET
85
L
TYR
86
n
86
TYR
86
L
ILE
87
n
87
ILE
87
L
CYS
88
n
88
CYS
88
L
GLN
89
n
89
GLN
89
L
GLN
90
n
90
GLN
90
L
HIS
91
n
91
HIS
91
L
ASN
92
n
92
ASN
92
L
GLU
93
n
93
GLU
93
L
TYR
94
n
94
TYR
94
L
PRO
95
n
95
PRO
95
L
TRP
96
n
96
TRP
96
L
THR
97
n
97
THR
97
L
PHE
98
n
98
PHE
98
L
GLY
99
n
99
GLY
99
L
GLY
100
n
100
GLY
100
L
GLY
101
n
101
GLY
101
L
THR
102
n
102
THR
102
L
LYS
103
n
103
LYS
103
L
LEU
104
n
104
LEU
104
L
GLU
105
n
105
GLU
105
L
ILE
106
n
106
ILE
106
L
LYS
107
n
107
LYS
107
L
ARG
108
n
108
ARG
108
L
GLN
1
n
1
GLN
1
H
VAL
2
n
2
VAL
2
H
GLN
3
n
3
GLN
3
H
LEU
4
n
4
LEU
4
H
GLN
5
n
5
GLN
5
H
GLN
6
n
6
GLN
6
H
SER
7
n
7
SER
7
H
GLY
8
n
8
GLY
8
H
ALA
9
n
9
ALA
9
H
GLU
10
n
10
GLU
10
H
LEU
11
n
11
LEU
11
H
VAL
12
n
12
VAL
12
H
ARG
13
n
13
ARG
13
H
PRO
14
n
14
PRO
14
H
GLY
15
n
15
GLY
15
H
ALA
16
n
16
ALA
16
H
SER
17
n
17
SER
17
H
VAL
18
n
18
VAL
18
H
LYS
19
n
19
LYS
19
H
LEU
20
n
20
LEU
20
H
SER
21
n
21
SER
21
H
CYS
22
n
22
CYS
22
H
LYS
23
n
23
LYS
23
H
ALA
24
n
24
ALA
24
H
SER
25
n
25
SER
25
H
GLY
26
n
26
GLY
26
H
TYR
27
n
27
TYR
27
H
THR
28
n
28
THR
28
H
PHE
29
n
29
PHE
29
H
ILE
30
n
30
ILE
30
H
SER
31
n
31
SER
31
H
TYR
32
n
32
TYR
32
H
TRP
33
n
33
TRP
33
H
ILE
34
n
34
ILE
34
H
ASN
35
n
35
ASN
35
H
TRP
36
n
36
TRP
36
H
VAL
37
n
37
VAL
37
H
LYS
38
n
38
LYS
38
H
GLN
39
n
39
GLN
39
H
ARG
40
n
40
ARG
40
H
PRO
41
n
41
PRO
41
H
GLY
42
n
42
GLY
42
H
GLN
43
n
43
GLN
43
H
GLY
44
n
44
GLY
44
H
LEU
45
n
45
LEU
45
H
GLU
46
n
46
GLU
46
H
TRP
47
n
47
TRP
47
H
ILE
48
n
48
ILE
48
H
GLY
49
n
49
GLY
49
H
ASN
50
n
50
ASN
50
H
ILE
51
n
51
ILE
51
H
TYR
52
n
52
TYR
52
H
PRO
53
n
53
PRO
53
H
SER
54
n
54
SER
54
H
ASP
55
n
55
ASP
55
H
SER
56
n
56
SER
56
H
TYR
57
n
57
TYR
57
H
THR
58
n
58
THR
58
H
ASN
59
n
59
ASN
59
H
TYR
60
n
60
TYR
60
H
ASN
61
n
61
ASN
61
H
GLN
62
n
62
GLN
62
H
LYS
63
n
63
LYS
63
H
PHE
64
n
64
PHE
64
H
LYS
65
n
65
LYS
65
H
ASP
66
n
66
ASP
66
H
LYS
67
n
67
LYS
67
H
ALA
68
n
68
ALA
68
H
THR
69
n
69
THR
69
H
LEU
70
n
70
LEU
70
H
THR
71
n
71
THR
71
H
VAL
72
n
72
VAL
72
H
ASP
73
n
73
ASP
73
H
LYS
74
n
74
LYS
74
H
SER
75
n
75
SER
75
H
SER
76
n
76
SER
76
H
SER
77
n
77
SER
77
H
THR
78
n
78
THR
78
H
ALA
79
n
79
ALA
79
H
TYR
80
n
80
TYR
80
H
MET
81
n
81
MET
81
H
GLN
82
n
82
GLN
82
H
LEU
83
n
83
LEU
83
H
SER
84
n
84
SER
84
H
SER
85
n
85
SER
85
H
PRO
86
n
86
PRO
86
H
THR
87
n
87
THR
87
H
SER
88
n
88
SER
88
H
GLU
89
n
89
GLU
89
H
ASP
90
n
90
ASP
90
H
SER
91
n
91
SER
91
H
ALA
92
n
92
ALA
92
H
VAL
93
n
93
VAL
93
H
TYR
94
n
94
TYR
94
H
TYR
95
n
95
TYR
95
H
CYS
96
n
96
CYS
96
H
THR
97
n
97
THR
97
H
ARG
98
n
98
ARG
98
H
ASP
99
n
99
ASP
99
H
ASP
100
n
100
ASP
100
H
ASN
101
n
101
ASN
101
H
TYR
102
n
102
TYR
102
H
GLY
103
n
103
GLY
103
H
ALA
104
n
104
ALA
104
H
MET
105
n
105
MET
105
H
ASP
106
n
106
ASP
106
H
TYR
107
n
107
TYR
107
H
TRP
108
n
108
TRP
108
H
GLY
109
n
109
GLY
109
H
GLN
110
n
110
GLN
110
H
GLY
111
n
111
GLY
111
H
THR
112
n
112
THR
112
H
THR
113
n
113
THR
113
H
VAL
114
n
114
VAL
114
H
THR
115
n
115
THR
115
H
VAL
116
n
116
VAL
116
H
LYS
1
n
1
LYS
1
A
VAL
2
n
2
VAL
2
A
TYR
3
n
3
TYR
3
A
GLY
4
n
4
GLY
4
A
ARG
5
n
5
ARG
5
A
CYS
6
n
6
CYS
6
A
GLU
7
n
7
GLU
7
A
LEU
8
n
8
LEU
8
A
ALA
9
n
9
ALA
9
A
ALA
10
n
10
ALA
10
A
ALA
11
n
11
ALA
11
A
MET
12
n
12
MET
12
A
LYS
13
n
13
LYS
13
A
ARG
14
n
14
ARG
14
A
MET
15
n
15
MET
15
A
GLY
16
n
16
GLY
16
A
LEU
17
n
17
LEU
17
A
ASP
18
n
18
ASP
18
A
ASN
19
n
19
ASN
19
A
TYR
20
n
20
TYR
20
A
ARG
21
n
21
ARG
21
A
GLY
22
n
22
GLY
22
A
TYR
23
n
23
TYR
23
A
SER
24
n
24
SER
24
A
LEU
25
n
25
LEU
25
A
GLY
26
n
26
GLY
26
A
ASN
27
n
27
ASN
27
A
TRP
28
n
28
TRP
28
A
VAL
29
n
29
VAL
29
A
CYS
30
n
30
CYS
30
A
ALA
31
n
31
ALA
31
A
ALA
32
n
32
ALA
32
A
LYS
33
n
33
LYS
33
A
PHE
34
n
34
PHE
34
A
GLU
35
n
35
GLU
35
A
SER
36
n
36
SER
36
A
ASN
37
n
37
ASN
37
A
PHE
38
n
38
PHE
38
A
ASN
39
n
39
ASN
39
A
THR
40
n
40
THR
40
A
GLY
41
n
41
GLY
41
A
ALA
42
n
42
ALA
42
A
THR
43
n
43
THR
43
A
ASN
44
n
44
ASN
44
A
ARG
45
n
45
ARG
45
A
ASN
46
n
46
ASN
46
A
THR
47
n
47
THR
47
A
ASP
48
n
48
ASP
48
A
GLY
49
n
49
GLY
49
A
SER
50
n
50
SER
50
A
THR
51
n
51
THR
51
A
ASP
52
n
52
ASP
52
A
TYR
53
n
53
TYR
53
A
GLY
54
n
54
GLY
54
A
ILE
55
n
55
ILE
55
A
LEU
56
n
56
LEU
56
A
GLN
57
n
57
GLN
57
A
ILE
58
n
58
ILE
58
A
ASN
59
n
59
ASN
59
A
SER
60
n
60
SER
60
A
ARG
61
n
61
ARG
61
A
TRP
62
n
62
TRP
62
A
TRP
63
n
63
TRP
63
A
CYS
64
n
64
CYS
64
A
ASN
65
n
65
ASN
65
A
ASP
66
n
66
ASP
66
A
GLY
67
n
67
GLY
67
A
ARG
68
n
68
ARG
68
A
THR
69
n
69
THR
69
A
PRO
70
n
70
PRO
70
A
GLY
71
n
71
GLY
71
A
SER
72
n
72
SER
72
A
LYS
73
n
73
LYS
73
A
ASN
74
n
74
ASN
74
A
LEU
75
n
75
LEU
75
A
CYS
76
n
76
CYS
76
A
HIS
77
n
77
HIS
77
A
ILE
78
n
78
ILE
78
A
PRO
79
n
79
PRO
79
A
CYS
80
n
80
CYS
80
A
SER
81
n
81
SER
81
A
ALA
82
n
82
ALA
82
A
LEU
83
n
83
LEU
83
A
LEU
84
n
84
LEU
84
A
SER
85
n
85
SER
85
A
SER
86
n
86
SER
86
A
ASP
87
n
87
ASP
87
A
ILE
88
n
88
ILE
88
A
THR
89
n
89
THR
89
A
ALA
90
n
90
ALA
90
A
SER
91
n
91
SER
91
A
VAL
92
n
92
VAL
92
A
ASN
93
n
93
ASN
93
A
CYS
94
n
94
CYS
94
A
ALA
95
n
95
ALA
95
A
LYS
96
n
96
LYS
96
A
LYS
97
n
97
LYS
97
A
ILE
98
n
98
ILE
98
A
VAL
99
n
99
VAL
99
A
SER
100
n
100
SER
100
A
ASP
101
n
101
ASP
101
A
GLY
102
n
102
GLY
102
A
ASP
103
n
103
ASP
103
A
GLY
104
n
104
GLY
104
A
MET
105
n
105
MET
105
A
ASN
106
n
106
ASN
106
A
ALA
107
n
107
ALA
107
A
TRP
108
n
108
TRP
108
A
VAL
109
n
109
VAL
109
A
ALA
110
n
110
ALA
110
A
TRP
111
n
111
TRP
111
A
ARG
112
n
112
ARG
112
A
LYS
113
n
113
LYS
113
A
HIS
114
n
114
HIS
114
A
CYS
115
n
115
CYS
115
A
LYS
116
n
116
LYS
116
A
GLY
117
n
117
GLY
117
A
THR
118
n
118
THR
118
A
ASP
119
n
119
ASP
119
A
VAL
120
n
120
VAL
120
A
ASN
121
n
121
ASN
121
A
VAL
122
n
122
VAL
122
A
TRP
123
n
123
TRP
123
A
ILE
124
n
124
ILE
124
A
ARG
125
n
125
ARG
125
A
GLY
126
n
126
GLY
126
A
CYS
127
n
127
CYS
127
A
ARG
128
n
128
ARG
128
A
LEU
129
n
129
LEU
129
A
author_defined_assembly
3
trimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
L
N
SER
7
A
N
SER
7
L
O
ASN
22
A
O
ASN
22
L
N
CYS
23
A
N
CYS
23
L
O
PHE
71
A
O
PHE
71
L
O
THR
74
A
O
THR
74
L
N
SER
63
A
N
SER
63
L
O
THR
53
A
O
THR
53
L
N
TYR
49
A
N
TYR
49
L
O
ILE
48
A
O
ILE
48
L
N
TRP
35
A
N
TRP
35
L
N
GLU
38
A
N
GLU
38
L
O
MET
85
A
O
MET
85
L
N
GLN
90
A
N
GLN
90
L
O
THR
97
A
O
THR
97
L
O
THR
53
A
O
THR
53
L
N
TYR
49
A
N
TYR
49
L
O
ILE
48
A
O
ILE
48
L
N
TRP
35
A
N
TRP
35
L
N
GLU
38
A
N
GLU
38
L
O
MET
85
A
O
MET
85
L
N
TYR
86
A
N
TYR
86
L
O
THR
102
A
O
THR
102
L
N
GLU
105
A
N
GLU
105
L
O
LEU
11
A
O
LEU
11
H
N
GLN
5
B
N
GLN
5
H
O
LYS
23
B
O
LYS
23
H
N
CYS
22
B
N
CYS
22
H
O
ALA
79
B
O
ALA
79
H
N
GLN
82
B
N
GLN
82
H
O
THR
69
B
O
THR
69
H
O
ASN
59
B
O
ASN
59
H
N
ASN
50
B
N
ASN
50
H
O
ILE
51
B
O
ILE
51
H
N
ILE
34
B
N
ILE
34
H
O
GLN
39
B
O
GLN
39
H
N
VAL
93
B
N
VAL
93
H
O
ARG
98
B
O
ARG
98
H
N
ASP
106
B
N
ASP
106
H
O
ASN
59
B
O
ASN
59
H
N
ASN
50
B
N
ASN
50
H
O
ILE
51
B
O
ILE
51
H
N
ILE
34
B
N
ILE
34
H
O
GLN
39
B
O
GLN
39
H
N
VAL
93
B
N
VAL
93
H
N
TYR
94
B
N
TYR
94
H
O
THR
112
B
O
THR
112
H
N
THR
115
B
N
THR
115
H
O
GLU
10
B
O
GLU
10
A
O
ASN
44
C
O
ASN
44
A
N
ASP
52
C
N
ASP
52
A
N
TYR
53
C
N
TYR
53
A
O
ILE
58
C
O
ILE
58
1
A
ASN
65
10.58
1
14.09
2.30
115.30
129.39
L
L
L
CA
CB
CG
LEU
LEU
LEU
4
4
4
N
1
-5.39
0.80
107.30
101.91
L
L
L
CE2
CD2
CG
TRP
TRP
TRP
35
35
35
N
1
-5.77
0.60
121.00
115.23
L
L
L
CB
CG
CD1
TYR
TYR
TYR
36
36
36
N
1
-9.80
1.50
110.50
100.70
L
L
L
N
CA
CB
SER
SER
SER
67
67
67
N
1
-14.87
2.20
117.20
102.33
L
L
L
CA
C
N
SER
SER
LEU
77
77
78
Y
1
5.40
0.80
106.30
111.70
L
L
L
CD1
CG
CD2
TRP
TRP
TRP
96
96
96
N
1
-5.74
0.80
107.30
101.56
L
L
L
CE2
CD2
CG
TRP
TRP
TRP
96
96
96
N
1
5.65
0.90
133.90
139.55
L
L
L
CG
CD2
CE3
TRP
TRP
TRP
96
96
96
N
1
-5.36
0.60
121.00
115.64
H
H
H
CB
CG
CD2
TYR
TYR
TYR
27
27
27
N
1
6.14
0.80
106.30
112.44
H
H
H
CD1
CG
CD2
TRP
TRP
TRP
33
33
33
N
1
-5.50
0.80
107.30
101.80
H
H
H
CE2
CD2
CG
TRP
TRP
TRP
33
33
33
N
1
8.64
0.80
106.30
114.94
H
H
H
CD1
CG
CD2
TRP
TRP
TRP
36
36
36
N
1
-8.71
1.00
110.10
101.39
H
H
H
CG
CD1
NE1
TRP
TRP
TRP
36
36
36
N
1
5.96
0.90
109.00
114.96
H
H
H
CD1
NE1
CE2
TRP
TRP
TRP
36
36
36
N
1
-6.28
0.80
107.30
101.02
H
H
H
CE2
CD2
CG
TRP
TRP
TRP
36
36
36
N
1
-11.12
1.60
110.90
99.78
H
H
H
CG1
CB
CG2
VAL
VAL
VAL
37
37
37
N
1
14.15
2.30
115.30
129.45
H
H
H
CA
CB
CG
LEU
LEU
LEU
45
45
45
N
1
6.34
0.80
106.30
112.64
H
H
H
CD1
CG
CD2
TRP
TRP
TRP
47
47
47
N
1
-7.10
1.00
110.10
103.00
H
H
H
CG
CD1
NE1
TRP
TRP
TRP
47
47
47
N
1
5.79
0.90
109.00
114.79
H
H
H
CD1
NE1
CE2
TRP
TRP
TRP
47
47
47
N
1
-5.26
0.80
107.30
102.04
H
H
H
CE2
CD2
CG
TRP
TRP
TRP
47
47
47
N
1
7.04
1.10
117.90
124.94
H
H
H
CD1
CG
CD2
TYR
TYR
TYR
57
57
57
N
1
-6.69
0.60
121.00
114.31
H
H
H
CB
CG
CD1
TYR
TYR
TYR
57
57
57
N
1
3.67
0.50
120.30
123.97
H
H
H
NE
CZ
NH1
ARG
ARG
ARG
98
98
98
N
1
-4.48
0.60
121.00
116.52
H
H
H
CB
CG
CD2
TYR
TYR
TYR
107
107
107
N
1
6.89
0.80
106.30
113.19
H
H
H
CD1
CG
CD2
TRP
TRP
TRP
108
108
108
N
1
-6.18
0.80
107.30
101.12
H
H
H
CE2
CD2
CG
TRP
TRP
TRP
108
108
108
N
1
-3.18
0.50
120.30
117.12
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
5
5
5
N
1
-4.42
0.50
120.30
115.88
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
14
14
14
N
1
4.28
0.50
120.30
124.58
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
21
21
21
N
1
8.36
0.80
106.30
114.66
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
28
28
28
N
1
-6.04
1.00
110.10
104.06
A
A
A
CG
CD1
NE1
TRP
TRP
TRP
28
28
28
N
1
-8.66
1.20
122.30
113.64
A
A
A
CD2
CE2
CZ2
TRP
TRP
TRP
28
28
28
N
1
-5.83
0.80
107.30
101.47
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
28
28
28
N
1
13.33
2.20
117.20
130.53
A
A
A
CA
C
N
GLU
GLU
SER
35
35
36
Y
1
-4.30
0.70
120.80
116.50
A
A
A
CB
CG
CD2
PHE
PHE
PHE
38
38
38
N
1
6.76
0.80
106.30
113.06
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
62
62
62
N
1
-9.29
1.30
127.00
117.71
A
A
A
CB
CG
CD1
TRP
TRP
TRP
62
62
62
N
1
-6.78
0.80
107.30
100.52
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
62
62
62
N
1
6.23
0.90
133.90
140.13
A
A
A
CG
CD2
CE3
TRP
TRP
TRP
62
62
62
N
1
8.26
0.80
106.30
114.56
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
63
63
63
N
1
-8.23
1.30
127.00
118.77
A
A
A
CB
CG
CD1
TRP
TRP
TRP
63
63
63
N
1
-7.48
1.00
110.10
102.62
A
A
A
CG
CD1
NE1
TRP
TRP
TRP
63
63
63
N
1
-7.22
0.80
107.30
100.08
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
63
63
63
N
1
6.47
0.90
133.90
140.37
A
A
A
CG
CD2
CE3
TRP
TRP
TRP
63
63
63
N
1
6.68
1.10
114.20
120.88
A
A
A
CA
CB
SG
CYS
CYS
CYS
64
64
64
N
1
-15.11
2.20
117.20
102.09
A
A
A
CA
C
N
ASN
ASN
ASP
65
65
66
Y
1
3.31
0.50
120.30
123.61
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
68
68
68
N
1
-3.54
0.50
120.30
116.76
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
68
68
68
N
1
17.30
2.30
115.30
132.60
A
A
A
CA
CB
CG
LEU
LEU
LEU
84
84
84
N
1
-10.85
1.70
113.30
102.45
A
A
A
CA
CB
CG
MET
MET
MET
105
105
105
N
1
7.85
0.80
106.30
114.15
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
108
108
108
N
1
-6.54
0.80
107.30
100.76
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
108
108
108
N
1
6.51
0.80
106.30
112.81
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
111
111
111
N
1
-5.88
0.80
107.30
101.42
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
111
111
111
N
1
4.43
0.50
120.30
124.73
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
112
112
112
N
1
-3.04
0.50
120.30
117.26
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
112
112
112
N
1
8.46
0.80
106.30
114.76
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
123
123
123
N
1
-6.02
1.00
110.10
104.08
A
A
A
CG
CD1
NE1
TRP
TRP
TRP
123
123
123
N
1
-7.62
0.80
107.30
99.68
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
123
123
123
N
1
-3.18
0.50
120.30
117.12
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
125
125
125
N
1
A
A
NE2
CD2
HIS
HIS
77
77
-0.071
0.011
1.373
1.302
N
1
L
SER
30
29.58
31.44
1
L
LYS
31
82.81
1.40
1
L
SER
50
55.21
79.60
1
L
SER
60
-38.18
-24.56
1
L
SER
67
-138.75
-52.34
1
L
SER
77
9.49
79.37
1
L
ASP
82
-95.78
56.50
1
H
ASP
55
-151.39
6.90
1
H
SER
56
47.33
25.09
1
H
SER
85
37.37
80.37
1
H
ALA
92
-165.84
-163.87
1
H
ASN
101
101.32
-12.86
1
A
LEU
56
-109.30
48.66
1
A
GLN
57
-0.96
68.39
1
A
TRP
62
-121.60
-53.94
1
A
HIS
77
57.55
75.29
1
A
CYS
80
-39.83
-31.73
1
A
ILE
88
-60.10
1.53
1
A
VAL
99
-59.83
-9.63
1
A
ASP
103
-177.64
-38.74
1
A
ALA
107
-69.18
0.74
0.214
0.214
2.4
7.0
16483
1
3.0
2.4
7.0
0
2745
0
0
2745
0.02
4.0
model building
X-PLOR
refinement
X-PLOR
phasing
X-PLOR
FV FRAGMENT (IGG1, KAPPA) (LIGHT AND HEAVY VARIABLE DOMAINS NON-COVALENTLY ASSOCIATED) OF MONOCLONAL ANTI-HEN EGG LYSOZYME ANTIBODY D11.15 COMPLEX WITH PHEASANT EGG LYSOZYME
THREE-DIMENSIONAL STRUCTURE OF A HETEROCLITIC ANTIGEN-ANTIBODY CROSS-REACTION COMPLEX
1
N
N
2
N
N
3
N
N
H
THR
28
B
THR
28
HELX_P
H
TYR
32
B
TYR
32
5
1
5
H
THR
87
B
THR
87
HELX_P
H
SER
91
B
SER
91
5
2
5
A
GLY
4
C
GLY
4
HELX_P
A
MET
15
C
MET
15
1
3
12
A
SER
24
C
SER
24
HELX_P
A
SER
36
C
SER
36
1
4
13
A
CYS
80
C
CYS
80
HELX_P
A
SER
85
C
SER
85
5
5
6
A
ILE
88
C
ILE
88
HELX_P
A
SER
100
C
SER
100
1
6
13
A
ASP
103
C
ASP
103
HELX_P
A
ALA
107
C
ALA
107
5
7
5
A
TRP
108
C
TRP
108
HELX_P
A
CYS
115
C
CYS
115
1
8
8
A
ASP
119
C
ASP
119
HELX_P
A
ILE
124
C
ILE
124
5
9
6
disulf
1.993
L
CYS
23
A
SG
CYS
23
1_555
L
CYS
88
A
SG
CYS
88
1_555
disulf
2.022
H
CYS
22
B
SG
CYS
22
1_555
H
CYS
96
B
SG
CYS
96
1_555
disulf
2.036
A
CYS
6
C
SG
CYS
6
1_555
A
CYS
127
C
SG
CYS
127
1_555
disulf
2.005
A
CYS
30
C
SG
CYS
30
1_555
A
CYS
115
C
SG
CYS
115
1_555
disulf
2.017
A
CYS
64
C
SG
CYS
64
1_555
A
CYS
80
C
SG
CYS
80
1_555
disulf
2.005
A
CYS
76
C
SG
CYS
76
1_555
A
CYS
94
C
SG
CYS
94
1_555
COMPLEX(ANTIBODY-ANTIGEN)
COMPLEX(ANTIBODY-ANTIGEN)
L
SER
7
A
SER
7
1
L
PRO
8
A
PRO
8
-0.63
L
TYR
94
A
TYR
94
1
L
PRO
95
A
PRO
95
-14.00
AAA38772
GB
1
21
196740
LYSC_PHACO
UNP
3
19
P00702
1JHL
PDB
2
1JHL
21
128
1JHL
1
108
196740
L
1
1
108
19
147
1JHL
1
129
P00702
A
2
1
129
1
116
1JHL
1
116
1JHL
H
3
1
116
1
VAL
CONFLICT
ILE
2
1JHL
L
196740
GB
22
2
1
GLN
CONFLICT
GLU
3
1JHL
L
196740
GB
23
3
1
ILE
CONFLICT
LEU
4
1JHL
L
196740
GB
24
4
1
PRO
CONFLICT
VAL
12
1JHL
L
196740
GB
32
12
1
ALA
CONFLICT
SER
14
1JHL
L
196740
GB
34
14
1
TYR
CONFLICT
SER
32
1JHL
L
196740
GB
52
32
1
LYS
CONFLICT
ASN
45
1JHL
L
196740
GB
65
45
1
ASN
CONFLICT
SER
65
1JHL
L
196740
GB
85
65
1
TYR
CONFLICT
ILE
87
1JHL
L
196740
GB
107
87
2
ASN
CONFLICT
ASP
103
1JHL
A
P00702
UNP
121
103
4
5
6
4
5
6
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
L
LEU
4
A
LEU
4
L
SER
7
A
SER
7
L
ILE
19
A
ILE
19
L
ALA
25
A
ALA
25
L
ASP
70
A
ASP
70
L
ILE
75
A
ILE
75
L
PHE
62
A
PHE
62
L
GLY
66
A
GLY
66
L
THR
53
A
THR
53
L
LEU
54
A
LEU
54
L
ASN
45
A
ASN
45
L
TYR
49
A
TYR
49
L
LEU
33
A
LEU
33
L
GLU
38
A
GLU
38
L
MET
85
A
MET
85
L
GLN
90
A
GLN
90
L
THR
97
A
THR
97
L
PHE
98
A
PHE
98
L
THR
53
A
THR
53
L
LEU
54
A
LEU
54
L
ASN
45
A
ASN
45
L
TYR
49
A
TYR
49
L
LEU
33
A
LEU
33
L
GLU
38
A
GLU
38
L
MET
85
A
MET
85
L
GLN
90
A
GLN
90
L
THR
102
A
THR
102
L
ILE
106
A
ILE
106
L
TYR
10
A
TYR
10
L
ALA
13
A
ALA
13
H
GLN
3
B
GLN
3
H
GLN
6
B
GLN
6
H
VAL
18
B
VAL
18
H
SER
25
B
SER
25
H
THR
78
B
THR
78
H
LEU
83
B
LEU
83
H
ALA
68
B
ALA
68
H
ASP
73
B
ASP
73
H
THR
58
B
THR
58
H
TYR
60
B
TYR
60
H
LEU
45
B
LEU
45
H
ILE
51
B
ILE
51
H
ILE
34
B
ILE
34
H
GLN
39
B
GLN
39
H
ALA
92
B
ALA
92
H
ASP
99
B
ASP
99
H
MET
105
B
MET
105
H
TRP
108
B
TRP
108
H
THR
58
B
THR
58
H
TYR
60
B
TYR
60
H
LEU
45
B
LEU
45
H
ILE
51
B
ILE
51
H
ILE
34
B
ILE
34
H
GLN
39
B
GLN
39
H
ALA
92
B
ALA
92
H
ASP
99
B
ASP
99
H
THR
112
B
THR
112
H
THR
115
B
THR
115
H
GLU
10
B
GLU
10
H
LEU
11
B
LEU
11
A
THR
43
C
THR
43
A
ARG
45
C
ARG
45
A
THR
51
C
THR
51
A
TYR
53
C
TYR
53
A
ILE
58
C
ILE
58
A
ASN
59
C
ASN
59
170
P 65