0.017917 0.000000 0.000000 0.000000 0.009109 0.000000 0.000000 0.000000 0.011178 0.000000 0.000000 0.000000 Wild, K. Sinning, I. Cusack, S. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 55.813 109.782 89.461 C9 H12 Br N2 O9 P 403.077 n 5-BROMO-URIDINE-5'-MONOPHOSPHATE RNA linking C10 H14 N5 O7 P 347.221 y ADENOSINE-5'-MONOPHOSPHATE RNA linking C10 H13 N5 O9 P2 409.186 n ADENOSINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHATE RNA linking C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C9 H14 N3 O8 P 323.197 y CYTIDINE-5'-MONOPHOSPHATE RNA linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O8 P 363.221 y GUANOSINE-5'-MONOPHOSPHATE RNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mg 2 24.305 MAGNESIUM ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C9 H13 N2 O9 P 324.181 y URIDINE-5'-MONOPHOSPHATE RNA linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N P N 2 N O N 3 N O N 4 N O N 5 N O N 6 N C N 7 R C N 8 N O N 9 S C N 10 N O N 11 R C N 12 N O N 13 R C N 14 N N N 15 N C N 16 N O N 17 N N N 18 N C N 19 N O N 20 N C N 21 N C N 22 N BR N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N O N 36 N P N 37 N O N 38 N O N 39 N O N 40 N C N 41 R C N 42 N O N 43 S C N 44 N O N 45 R C N 46 N O N 47 R C Y 48 N N Y 49 N C Y 50 N N Y 51 N C Y 52 N C N 53 N N Y 54 N N Y 55 N C Y 56 N N Y 57 N C N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 S P N 73 N O N 74 N O N 75 N P N 76 N O N 77 N O N 78 N O N 79 N O N 80 N C N 81 R C N 82 N O N 83 R C N 84 N O N 85 R C N 86 N O N 87 R C Y 88 N N Y 89 N C Y 90 N N Y 91 N C Y 92 N C N 93 N N Y 94 N N Y 95 N C Y 96 N N Y 97 N C N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N N N 112 S C N 113 N C N 114 N O N 115 N C N 116 N O N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N N N 125 S C N 126 N C N 127 N O N 128 N C N 129 N C N 130 N C N 131 N N N 132 N C N 133 N N N 134 N N N 135 N O N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N N N 152 S C N 153 N C N 154 N O N 155 N C N 156 N C N 157 N O N 158 N N N 159 N O N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N N N 169 S C N 170 N C N 171 N O N 172 N C N 173 N C N 174 N O N 175 N O N 176 N O N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N O N 185 N P N 186 N O N 187 N O N 188 N O N 189 N C N 190 R C N 191 N O N 192 S C N 193 N O N 194 R C N 195 N O N 196 R C N 197 N N N 198 N C N 199 N O N 200 N N N 201 N C N 202 N N N 203 N C N 204 N C N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N N N 220 R C N 221 N C N 222 N O N 223 N C N 224 N S N 225 N O N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N O N 234 N P N 235 N O N 236 N O N 237 N O N 238 N C N 239 R C N 240 N O N 241 S C N 242 N O N 243 R C N 244 N O N 245 R C Y 246 N N Y 247 N C Y 248 N N Y 249 N C N 250 N C N 251 N O N 252 N N N 253 N C N 254 N N N 255 N N Y 256 N C N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N N N 272 S C N 273 N C N 274 N O N 275 N C N 276 N C N 277 N C N 278 N O N 279 N N N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N N N 292 S C N 293 N C N 294 N O N 295 N C N 296 N C N 297 N C N 298 N O N 299 N O N 300 N O N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N N N 311 N C N 312 N C N 313 N O N 314 N O N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N N N 321 S C N 322 N C N 323 N O N 324 N C Y 325 N C Y 326 N N Y 327 N C Y 328 N C Y 329 N N N 330 N O N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N O N 342 N H N 343 N H N 344 N N N 345 S C N 346 N C N 347 N O N 348 S C N 349 N C N 350 N C N 351 N C N 352 N O N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N N N 367 S C N 368 N C N 369 N O N 370 N C N 371 N C N 372 N C N 373 N C N 374 N O N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N N N 389 S C N 390 N C N 391 N O N 392 N C N 393 N C N 394 N C N 395 N C N 396 N N N 397 N O N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N N N 414 S C N 415 N C N 416 N O N 417 N C N 418 N C N 419 N S N 420 N C N 421 N O N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N MG N 434 N N N 435 S C N 436 N C N 437 N O N 438 N C Y 439 N C Y 440 N C Y 441 N C Y 442 N C Y 443 N C Y 444 N C N 445 N O N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N N N 458 S C N 459 N C N 460 N O N 461 N C N 462 N C N 463 N C N 464 N O N 465 N H N 466 N H N 467 N H N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 474 N N N 475 S C N 476 N C N 477 N O N 478 N C N 479 N O N 480 N O N 481 N H N 482 N H N 483 N H N 484 N H N 485 N H N 486 N H N 487 N H N 488 N N N 489 S C N 490 N C N 491 N O N 492 R C N 493 N O N 494 N C N 495 N O N 496 N H N 497 N H N 498 N H N 499 N H N 500 N H N 501 N H N 502 N H N 503 N H N 504 N H N 505 N N N 506 S C N 507 N C N 508 N O N 509 N C Y 510 N C Y 511 N C Y 512 N C Y 513 N N Y 514 N C Y 515 N C Y 516 N C Y 517 N C Y 518 N C N 519 N O N 520 N H N 521 N H N 522 N H N 523 N H N 524 N H N 525 N H N 526 N H N 527 N H N 528 N H N 529 N H N 530 N H N 531 N H N 532 N N N 533 S C N 534 N C N 535 N O N 536 N C Y 537 N C Y 538 N C Y 539 N C Y 540 N C Y 541 N C Y 542 N C N 543 N O N 544 N O N 545 N H N 546 N H N 547 N H N 548 N H N 549 N H N 550 N H N 551 N H N 552 N H N 553 N H N 554 N H N 555 N H N 556 N O N 557 N P N 558 N O N 559 N O N 560 N O N 561 N C N 562 R C N 563 N O N 564 S C N 565 N O N 566 R C N 567 N O N 568 R C N 569 N N N 570 N C N 571 N O N 572 N N N 573 N C N 574 N O N 575 N C N 576 N C N 577 N H N 578 N H N 579 N H N 580 N H N 581 N H N 582 N H N 583 N H N 584 N H N 585 N H N 586 N H N 587 N H N 588 N H N 589 N H N 590 N N N 591 S C N 592 N C N 593 N O N 594 N C N 595 N C N 596 N C N 597 N O N 598 N H N 599 N H N 600 N H N 601 N H N 602 N H N 603 N H N 604 N H N 605 N H N 606 N H N 607 N H N 608 N H N 1 N doub N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N doub N 28 N sing N 29 N sing N 30 N sing N 31 N doub N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N doub N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing Y 60 N sing Y 61 N sing Y 62 N doub N 63 N sing Y 64 N sing Y 65 N sing Y 66 N doub N 67 N sing Y 68 N doub N 69 N sing N 70 N sing Y 71 N sing Y 72 N doub N 73 N sing Y 74 N sing N 75 N doub N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N doub N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing Y 102 N sing Y 103 N sing Y 104 N doub N 105 N sing Y 106 N sing Y 107 N sing Y 108 N doub N 109 N sing Y 110 N doub N 111 N sing N 112 N sing Y 113 N sing Y 114 N doub N 115 N sing Y 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N doub N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N doub N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N doub N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N doub N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N doub N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N doub N 213 N sing N 214 N doub N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N doub N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N doub N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N doub N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing Y 259 N sing Y 260 N sing Y 261 N doub N 262 N sing Y 263 N sing N 264 N sing Y 265 N doub N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N doub N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N doub N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N doub N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N doub N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N doub N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N doub N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N doub N 328 N sing N 329 N sing N 330 N sing N 331 N sing Y 332 N sing Y 333 N doub Y 334 N doub N 335 N sing Y 336 N sing N 337 N sing Y 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N doub N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N doub N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N doub N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N doub N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N doub N 436 N sing N 437 N sing N 438 N sing N 439 N sing Y 440 N doub Y 441 N sing Y 442 N sing N 443 N sing Y 444 N doub N 445 N sing Y 446 N doub N 447 N sing Y 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N doub N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N sing N 474 N sing N 475 N doub N 476 N sing N 477 N sing N 478 N sing N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N doub N 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N sing N 495 N sing N 496 N sing N 497 N sing N 498 N sing N 499 N sing N 500 N sing N 501 N sing N 502 N sing N 503 N sing N 504 N doub N 505 N sing N 506 N sing N 507 N sing N 508 N sing Y 509 N doub Y 510 N sing Y 511 N sing N 512 N sing Y 513 N doub Y 514 N sing Y 515 N sing N 516 N sing Y 517 N sing Y 518 N doub N 519 N sing Y 520 N doub N 521 N sing Y 522 N sing N 523 N sing N 524 N sing N 525 N sing N 526 N sing N 527 N sing N 528 N sing N 529 N sing N 530 N sing N 531 N sing N 532 N doub N 533 N sing N 534 N sing N 535 N sing N 536 N sing Y 537 N doub Y 538 N sing Y 539 N sing N 540 N sing Y 541 N doub N 542 N sing Y 543 N doub N 544 N sing Y 545 N sing N 546 N sing N 547 N sing N 548 N sing N 549 N sing N 550 N sing N 551 N sing N 552 N doub N 553 N sing N 554 N sing N 555 N sing N 556 N sing N 557 N sing N 558 N sing N 559 N sing N 560 N sing N 561 N sing N 562 N sing N 563 N sing N 564 N sing N 565 N sing N 566 N sing N 567 N sing N 568 N sing N 569 N sing N 570 N sing N 571 N sing N 572 N sing N 573 N sing N 574 N sing N 575 N sing N 576 N doub N 577 N sing N 578 N sing N 579 N sing N 580 N doub N 581 N sing N 582 N doub N 583 N sing N 584 N sing N 585 N sing N 586 N sing N 587 N sing N 588 N sing N 589 N sing N 590 N sing N 591 N doub N 592 N sing N 593 N sing N 594 N sing N 595 N sing N 596 N sing N 597 N sing N 598 N sing N 599 N sing N 600 N sing N 601 N sing N 602 N sing US Science SCIEAS 0038 0036-8075 294 598 601 10.1126/science.1063839 11641499 Crystal structure of an early protein-RNA assembly complex of the signal recognition particle. 2001 UK Structure STRUE6 2005 0969-2126 7 1345 1352 10.1016/S0969-2126(00)80024-6 The 2 A structure of helix 6 of the human signal recognition particle RNA 1999 10.2210/pdb1jid/pdb pdb_00001jid 100 1 CCD 2001-05-01 ADSC QUANTUM 4 Silicium SINGLE WAVELENGTH M x-ray 1 0.91902 1.0 ID29 ESRF 0.91902 SYNCHROTRON ESRF BEAMLINE ID29 9628.433 HELIX 6 OF HUMAN SRP RNA C162U 1 syn polymer 14791.062 SIGNAL RECOGNITION PARTICLE 19 KDA PROTEIN 24 C-TERMINAL RESIDUES TRUNCATED 1 man polymer 24.305 MAGNESIUM ION 2 syn non-polymer 18.015 water 277 nat water no yes GG(5BU)GACC(5BU)CCCGGGAGCGGGGGACCACU(A23) GGUGACCUCCCGGGAGCGGGGGACCACUA B polyribonucleotide no no MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNVFLEKNKMYSREWNRDVQYRG RVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQLEHHHHHH MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNVFLEKNKMYSREWNRDVQYRG RVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQLEHHHHHH A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia sample 9606 Homo sapiens 562 Escherichia coli JM109 1 2.82 55 VAPOR DIFFUSION, HANGING DROP 5.6 potassium chloride, magnesium chloride, sodium chloride, PEG 3350, isopropanol, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 291K 291 KCl 1 MgCl2 1 NaCl 1 PEG 3350 1 isopropanol 1 -10.924 1 28 B 135 B 162 2.122 B_G135:U162_B 1 -0.765 -2.373 -0.218 -0.484 0.935 1 19 B 136 B 161 2.196 B_G136:C161_B 2 -5.759 -0.427 0.148 -0.125 4.598 1 20 B 137 B 160 4.489 B_5BU137:A160_B 3 -11.296 0.128 0.050 -0.160 -2.977 1 19 B 138 B 159 -0.647 B_G138:C159_B 4 -12.714 -0.283 -0.108 -0.183 0.413 1 B 139 B 158 3.664 B_A139:C158_B 5 -11.956 -2.678 0.041 -0.520 5.577 1 B 140 B 157 9.128 B_C140:A157_B 6 -12.993 2.446 0.069 -0.314 4.477 1 19 B 141 B 156 3.602 B_C141:G156_B 7 -12.966 0.577 -0.161 -0.200 1.009 1 28 B 142 B 155 -0.444 B_5BU142:G155_B 8 -10.162 2.030 0.093 -0.628 11.628 1 19 B 143 B 154 0.174 B_C143:G154_B 9 -12.019 0.314 0.017 -0.166 11.466 1 19 B 144 B 153 1.256 B_C144:G153_B 10 -7.109 0.212 -0.277 -0.156 8.750 1 19 B 145 B 152 1.915 B_C145:G152_B 11 -8.528 0.268 -0.299 -0.219 -5.838 1 19 B 146 B 151 0.660 B_G146:C151_B 12 -3.074 0.015 -0.189 -0.200 2.852 33.114 B B 135 136 8.969 B B 162 161 3.003 5.075 -1.266 -1.786 BB_G135G136:C161U162_BB 1 -4.847 8.566 32.382 -3.908 1.482 3.011 34.129 B B 136 137 8.504 B B 161 160 3.162 4.974 0.204 -0.868 BB_G1365BU137:A160C161_BB 2 0.834 -1.426 33.765 -2.228 -0.222 2.616 31.471 B B 137 138 21.408 B B 160 159 3.365 11.361 -0.263 -1.493 BB_5BU137G138:C159A160_BB 3 0.564 -1.062 29.392 -4.764 0.586 2.255 23.583 B B 138 139 17.988 B B 159 158 2.995 7.187 -0.091 -1.851 BB_G138A139:C158C159_BB 4 -4.723 11.822 21.979 -6.530 -1.093 3.149 54.766 B B 139 140 6.263 B B 158 157 3.216 5.752 0.536 -0.611 BB_A139C140:A157C158_BB 5 0.934 -1.017 54.479 -1.000 -0.529 2.297 21.622 B B 140 141 15.902 B B 157 156 3.089 5.875 -0.418 -2.232 BB_C140C141:G156A157_BB 6 2.777 -7.517 20.633 -7.923 2.048 2.890 36.591 B B 141 142 13.190 B B 156 155 3.317 8.214 -0.767 -1.705 BB_C1415BU142:G155G156_BB 7 -1.203 1.932 35.668 -3.803 1.062 2.128 25.517 B B 142 143 15.963 B B 155 154 2.787 6.956 0.255 -2.116 BB_5BU142C143:G154G155_BB 8 2.110 -4.842 24.476 -6.314 -0.116 2.780 24.866 B B 143 144 11.770 B B 154 153 3.262 5.031 -0.745 -2.273 BB_C143C144:G153G154_BB 9 -1.399 3.272 24.319 -6.692 1.336 2.624 31.642 B B 144 145 15.842 B B 153 152 3.291 8.533 -0.275 -2.127 BB_C144C145:G152G153_BB 10 -1.643 3.050 30.455 -5.356 0.225 2.856 30.496 B B 145 146 17.033 B B 152 151 3.677 8.837 0.438 -2.365 BB_C145G146:C151G152_BB 11 -0.021 0.041 29.217 -6.293 -0.836 database_2 pdbx_struct_conn_angle struct_conn struct_conn_type struct_ref_seq_dif struct_site chem_comp_atom chem_comp_bond pdbx_initial_refinement_model repository Initial release Version format compliance Version format compliance Database references Derived calculations Data collection Refinement description 1 0 2001-10-19 1 1 2008-04-27 1 2 2011-07-13 1 3 2021-10-27 1 4 2023-08-16 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.conn_type_id _struct_conn.id _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn_type.id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id 29-Mer Fragment Of Human Srp RNA Helix 6 RCSB Y RCSB 2001-07-02 REL REL MG MAGNESIUM ION HOH water This sequence occurs naturally in humans. The RNA has been in vitro transcribed using T7 RNA polymerase. sample 1D4R PDB ENTRY 1D4R PDB experimental model MO3 1 3 MG MG 301 B MO3 2 3 MG MG 302 B MO3 1 4 HOH HOH 303 B MO3 1 4 HOH HOH 304 B MO3 1 4 HOH HOH 305 B MO3 2 4 HOH HOH 306 B MO3 2 4 HOH HOH 307 B MO3 2 4 HOH HOH 308 B TIP 3 4 HOH HOH 309 B TIP 5 4 HOH HOH 310 B TIP 7 4 HOH HOH 311 B TIP 8 4 HOH HOH 312 B TIP 11 4 HOH HOH 313 B TIP 14 4 HOH HOH 314 B TIP 18 4 HOH HOH 315 B TIP 19 4 HOH HOH 316 B TIP 20 4 HOH HOH 317 B TIP 24 4 HOH HOH 318 B TIP 25 4 HOH HOH 319 B TIP 29 4 HOH HOH 320 B TIP 30 4 HOH HOH 321 B TIP 31 4 HOH HOH 322 B TIP 32 4 HOH HOH 323 B TIP 34 4 HOH HOH 324 B TIP 39 4 HOH HOH 325 B TIP 41 4 HOH HOH 326 B TIP 42 4 HOH HOH 327 B TIP 44 4 HOH HOH 328 B TIP 46 4 HOH HOH 329 B TIP 47 4 HOH HOH 330 B TIP 48 4 HOH HOH 331 B TIP 50 4 HOH HOH 332 B TIP 56 4 HOH HOH 333 B TIP 57 4 HOH HOH 334 B TIP 58 4 HOH HOH 335 B TIP 59 4 HOH HOH 336 B TIP 61 4 HOH HOH 337 B TIP 63 4 HOH HOH 338 B TIP 64 4 HOH HOH 339 B TIP 65 4 HOH HOH 340 B TIP 71 4 HOH HOH 341 B TIP 73 4 HOH HOH 342 B TIP 74 4 HOH HOH 343 B TIP 76 4 HOH HOH 344 B TIP 77 4 HOH HOH 345 B TIP 79 4 HOH HOH 346 B TIP 80 4 HOH HOH 347 B TIP 81 4 HOH HOH 348 B TIP 82 4 HOH HOH 349 B TIP 89 4 HOH HOH 350 B TIP 90 4 HOH HOH 351 B TIP 93 4 HOH HOH 352 B TIP 94 4 HOH HOH 353 B TIP 96 4 HOH HOH 354 B TIP 97 4 HOH HOH 355 B TIP 98 4 HOH HOH 356 B TIP 101 4 HOH HOH 357 B TIP 104 4 HOH HOH 358 B TIP 105 4 HOH HOH 359 B TIP 106 4 HOH HOH 360 B TIP 107 4 HOH HOH 361 B TIP 108 4 HOH HOH 362 B TIP 111 4 HOH HOH 363 B TIP 114 4 HOH HOH 364 B TIP 115 4 HOH HOH 365 B TIP 116 4 HOH HOH 366 B TIP 119 4 HOH HOH 367 B TIP 122 4 HOH HOH 368 B TIP 123 4 HOH HOH 369 B TIP 124 4 HOH HOH 370 B TIP 130 4 HOH HOH 371 B TIP 131 4 HOH HOH 372 B TIP 132 4 HOH HOH 373 B TIP 133 4 HOH HOH 374 B TIP 135 4 HOH HOH 375 B TIP 136 4 HOH HOH 376 B TIP 138 4 HOH HOH 377 B TIP 139 4 HOH HOH 378 B TIP 145 4 HOH HOH 379 B TIP 146 4 HOH HOH 380 B TIP 148 4 HOH HOH 381 B TIP 149 4 HOH HOH 382 B TIP 150 4 HOH HOH 383 B TIP 151 4 HOH HOH 384 B TIP 154 4 HOH HOH 385 B TIP 155 4 HOH HOH 386 B TIP 156 4 HOH HOH 387 B TIP 157 4 HOH HOH 388 B TIP 158 4 HOH HOH 389 B TIP 161 4 HOH HOH 390 B TIP 165 4 HOH HOH 391 B TIP 166 4 HOH HOH 392 B TIP 169 4 HOH HOH 393 B TIP 177 4 HOH HOH 394 B TIP 178 4 HOH HOH 395 B TIP 179 4 HOH HOH 396 B TIP 186 4 HOH HOH 397 B TIP 191 4 HOH HOH 398 B TIP 193 4 HOH HOH 399 B TIP 196 4 HOH HOH 400 B TIP 203 4 HOH HOH 401 B TIP 206 4 HOH HOH 402 B TIP 208 4 HOH HOH 403 B TIP 209 4 HOH HOH 404 B TIP 222 4 HOH HOH 405 B TIP 223 4 HOH HOH 406 B TIP 224 4 HOH HOH 407 B TIP 227 4 HOH HOH 408 B TIP 228 4 HOH HOH 409 B TIP 229 4 HOH HOH 410 B TIP 233 4 HOH HOH 411 B TIP 235 4 HOH HOH 412 B TIP 236 4 HOH HOH 413 B TIP 239 4 HOH HOH 414 B TIP 240 4 HOH HOH 415 B TIP 241 4 HOH HOH 416 B TIP 242 4 HOH HOH 417 B TIP 243 4 HOH HOH 418 B TIP 246 4 HOH HOH 419 B TIP 247 4 HOH HOH 420 B TIP 250 4 HOH HOH 421 B TIP 251 4 HOH HOH 422 B TIP 253 4 HOH HOH 423 B TIP 254 4 HOH HOH 424 B TIP 256 4 HOH HOH 425 B TIP 259 4 HOH HOH 426 B TIP 260 4 HOH HOH 427 B TIP 263 4 HOH HOH 428 B TIP 265 4 HOH HOH 429 B TIP 269 4 HOH HOH 430 B TIP 270 4 HOH HOH 431 B TIP 1 4 HOH HOH 129 A TIP 2 4 HOH HOH 130 A TIP 4 4 HOH HOH 131 A TIP 6 4 HOH HOH 132 A TIP 9 4 HOH HOH 133 A TIP 10 4 HOH HOH 134 A TIP 12 4 HOH HOH 135 A TIP 13 4 HOH HOH 136 A TIP 15 4 HOH HOH 137 A TIP 16 4 HOH HOH 138 A TIP 17 4 HOH HOH 139 A TIP 21 4 HOH HOH 140 A TIP 22 4 HOH HOH 141 A TIP 23 4 HOH HOH 142 A TIP 26 4 HOH HOH 143 A TIP 27 4 HOH HOH 144 A TIP 28 4 HOH HOH 145 A TIP 33 4 HOH HOH 146 A TIP 35 4 HOH HOH 147 A TIP 36 4 HOH HOH 148 A TIP 37 4 HOH HOH 149 A TIP 38 4 HOH HOH 150 A TIP 40 4 HOH HOH 151 A TIP 43 4 HOH HOH 152 A TIP 45 4 HOH HOH 153 A TIP 49 4 HOH HOH 154 A TIP 51 4 HOH HOH 155 A TIP 52 4 HOH HOH 156 A TIP 53 4 HOH HOH 157 A TIP 54 4 HOH HOH 158 A TIP 55 4 HOH HOH 159 A TIP 60 4 HOH HOH 160 A TIP 62 4 HOH HOH 161 A TIP 66 4 HOH HOH 162 A TIP 67 4 HOH HOH 163 A TIP 68 4 HOH HOH 164 A TIP 69 4 HOH HOH 165 A TIP 70 4 HOH HOH 166 A TIP 72 4 HOH HOH 167 A TIP 75 4 HOH HOH 168 A TIP 78 4 HOH HOH 169 A TIP 83 4 HOH HOH 170 A TIP 84 4 HOH HOH 171 A TIP 85 4 HOH HOH 172 A TIP 86 4 HOH HOH 173 A TIP 87 4 HOH HOH 174 A TIP 88 4 HOH HOH 175 A TIP 91 4 HOH HOH 176 A TIP 92 4 HOH HOH 177 A TIP 95 4 HOH HOH 178 A TIP 99 4 HOH HOH 179 A TIP 100 4 HOH HOH 180 A TIP 102 4 HOH HOH 181 A TIP 103 4 HOH HOH 182 A TIP 109 4 HOH HOH 183 A TIP 110 4 HOH HOH 184 A TIP 112 4 HOH HOH 185 A TIP 113 4 HOH HOH 186 A TIP 117 4 HOH HOH 187 A TIP 118 4 HOH HOH 188 A TIP 120 4 HOH HOH 189 A TIP 121 4 HOH HOH 190 A TIP 125 4 HOH HOH 191 A TIP 126 4 HOH HOH 192 A TIP 127 4 HOH HOH 193 A TIP 128 4 HOH HOH 194 A TIP 129 4 HOH HOH 195 A TIP 134 4 HOH HOH 196 A TIP 137 4 HOH HOH 197 A TIP 140 4 HOH HOH 198 A TIP 141 4 HOH HOH 199 A TIP 142 4 HOH HOH 200 A TIP 143 4 HOH HOH 201 A TIP 144 4 HOH HOH 202 A TIP 147 4 HOH HOH 203 A TIP 152 4 HOH HOH 204 A TIP 153 4 HOH HOH 205 A TIP 159 4 HOH HOH 206 A TIP 160 4 HOH HOH 207 A TIP 162 4 HOH HOH 208 A TIP 163 4 HOH HOH 209 A TIP 164 4 HOH HOH 210 A TIP 167 4 HOH HOH 211 A TIP 168 4 HOH HOH 212 A TIP 170 4 HOH HOH 213 A TIP 171 4 HOH HOH 214 A TIP 172 4 HOH HOH 215 A TIP 173 4 HOH HOH 216 A TIP 174 4 HOH HOH 217 A TIP 175 4 HOH HOH 218 A TIP 176 4 HOH HOH 219 A TIP 180 4 HOH HOH 220 A TIP 181 4 HOH HOH 221 A TIP 182 4 HOH HOH 222 A TIP 183 4 HOH HOH 223 A TIP 184 4 HOH HOH 224 A TIP 185 4 HOH HOH 225 A TIP 187 4 HOH HOH 226 A TIP 188 4 HOH HOH 227 A TIP 189 4 HOH HOH 228 A TIP 190 4 HOH HOH 229 A TIP 192 4 HOH HOH 230 A TIP 194 4 HOH HOH 231 A TIP 195 4 HOH HOH 232 A TIP 197 4 HOH HOH 233 A TIP 198 4 HOH HOH 234 A TIP 199 4 HOH HOH 235 A TIP 200 4 HOH HOH 236 A TIP 201 4 HOH HOH 237 A TIP 202 4 HOH HOH 238 A TIP 204 4 HOH HOH 239 A TIP 205 4 HOH HOH 240 A TIP 207 4 HOH HOH 241 A TIP 210 4 HOH HOH 242 A TIP 211 4 HOH HOH 243 A TIP 212 4 HOH HOH 244 A TIP 213 4 HOH HOH 245 A TIP 214 4 HOH HOH 246 A TIP 215 4 HOH HOH 247 A TIP 216 4 HOH HOH 248 A TIP 217 4 HOH HOH 249 A TIP 218 4 HOH HOH 250 A TIP 219 4 HOH HOH 251 A TIP 220 4 HOH HOH 252 A TIP 221 4 HOH HOH 253 A TIP 225 4 HOH HOH 254 A TIP 226 4 HOH HOH 255 A TIP 230 4 HOH HOH 256 A TIP 231 4 HOH HOH 257 A TIP 232 4 HOH HOH 258 A TIP 234 4 HOH HOH 259 A TIP 237 4 HOH HOH 260 A TIP 238 4 HOH HOH 261 A TIP 244 4 HOH HOH 262 A TIP 245 4 HOH HOH 263 A TIP 248 4 HOH HOH 264 A TIP 249 4 HOH HOH 265 A TIP 252 4 HOH HOH 266 A TIP 255 4 HOH HOH 267 A TIP 257 4 HOH HOH 268 A TIP 258 4 HOH HOH 269 A TIP 261 4 HOH HOH 270 A TIP 262 4 HOH HOH 271 A TIP 264 4 HOH HOH 272 A TIP 266 4 HOH HOH 273 A TIP 267 4 HOH HOH 274 A TIP 268 4 HOH HOH 275 A TIP 271 4 HOH HOH 276 A G 1 n 1 G 135 B G 2 n 2 G 136 B +U 3 n 3 5BU 137 B G 4 n 4 G 138 B A 5 n 5 A 139 B C 6 n 6 C 140 B C 7 n 7 C 141 B +U 8 n 8 5BU 142 B C 9 n 9 C 143 B C 10 n 10 C 144 B C 11 n 11 C 145 B G 12 n 12 G 146 B G 13 n 13 G 147 B G 14 n 14 G 148 B A 15 n 15 A 149 B G 16 n 16 G 150 B C 17 n 17 C 151 B G 18 n 18 G 152 B G 19 n 19 G 153 B G 20 n 20 G 154 B G 21 n 21 G 155 B G 22 n 22 G 156 B A 23 n 23 A 157 B C 24 n 24 C 158 B C 25 n 25 C 159 B A 26 n 26 A 160 B C 27 n 27 C 161 B U 28 n 28 U 162 B A23 29 n 29 A23 163 B n 1 1 A n 2 2 A n 3 3 A n 4 4 A ALA 1 n 5 ALA 5 A ALA 2 n 6 ALA 6 A ARG 3 n 7 ARG 7 A SER 4 n 8 SER 8 A PRO 5 n 9 PRO 9 A ALA 6 n 10 ALA 10 A ASP 7 n 11 ASP 11 A GLN 8 n 12 GLN 12 A ASP 9 n 13 ASP 13 A ARG 10 n 14 ARG 14 A PHE 11 n 15 PHE 15 A ILE 12 n 16 ILE 16 A CYS 13 n 17 CYS 17 A ILE 14 n 18 ILE 18 A TYR 15 n 19 TYR 19 A PRO 16 n 20 PRO 20 A ALA 17 n 21 ALA 21 A TYR 18 n 22 TYR 22 A LEU 19 n 23 LEU 23 A ASN 20 n 24 ASN 24 A ASN 21 n 25 ASN 25 A LYS 22 n 26 LYS 26 A LYS 23 n 27 LYS 27 A THR 24 n 28 THR 28 A ILE 25 n 29 ILE 29 A ALA 26 n 30 ALA 30 A GLU 27 n 31 GLU 31 A GLY 28 n 32 GLY 32 A ARG 29 n 33 ARG 33 A ARG 30 n 34 ARG 34 A ILE 31 n 35 ILE 35 A PRO 32 n 36 PRO 36 A ILE 33 n 37 ILE 37 A SER 34 n 38 SER 38 A LYS 35 n 39 LYS 39 A ALA 36 n 40 ALA 40 A VAL 37 n 41 VAL 41 A GLU 38 n 42 GLU 42 A ASN 39 n 43 ASN 43 A PRO 40 n 44 PRO 44 A THR 41 n 45 THR 45 A ALA 42 n 46 ALA 46 A THR 43 n 47 THR 47 A GLU 44 n 48 GLU 48 A ILE 45 n 49 ILE 49 A GLN 46 n 50 GLN 50 A ASP 47 n 51 ASP 51 A VAL 48 n 52 VAL 52 A CYS 49 n 53 CYS 53 A SER 50 n 54 SER 54 A ALA 51 n 55 ALA 55 A VAL 52 n 56 VAL 56 A GLY 53 n 57 GLY 57 A LEU 54 n 58 LEU 58 A ASN 55 n 59 ASN 59 A VAL 56 n 60 VAL 60 A PHE 57 n 61 PHE 61 A LEU 58 n 62 LEU 62 A GLU 59 n 63 GLU 63 A LYS 60 n 64 LYS 64 A ASN 61 n 65 ASN 65 A LYS 62 n 66 LYS 66 A MET 63 n 67 MET 67 A TYR 64 n 68 TYR 68 A SER 65 n 69 SER 69 A ARG 66 n 70 ARG 70 A GLU 67 n 71 GLU 71 A TRP 68 n 72 TRP 72 A ASN 69 n 73 ASN 73 A ARG 70 n 74 ARG 74 A ASP 71 n 75 ASP 75 A VAL 72 n 76 VAL 76 A GLN 73 n 77 GLN 77 A TYR 74 n 78 TYR 78 A ARG 75 n 79 ARG 79 A GLY 76 n 80 GLY 80 A ARG 77 n 81 ARG 81 A VAL 78 n 82 VAL 82 A ARG 79 n 83 ARG 83 A VAL 80 n 84 VAL 84 A GLN 81 n 85 GLN 85 A LEU 82 n 86 LEU 86 A LYS 83 n 87 LYS 87 A GLN 84 n 88 GLN 88 A GLU 85 n 89 GLU 89 A ASP 86 n 90 ASP 90 A GLY 87 n 91 GLY 91 A SER 88 n 92 SER 92 A LEU 89 n 93 LEU 93 A CYS 90 n 94 CYS 94 A LEU 91 n 95 LEU 95 A VAL 92 n 96 VAL 96 A GLN 93 n 97 GLN 97 A PHE 94 n 98 PHE 98 A PRO 95 n 99 PRO 99 A SER 96 n 100 SER 100 A ARG 97 n 101 ARG 101 A LYS 98 n 102 LYS 102 A SER 99 n 103 SER 103 A VAL 100 n 104 VAL 104 A MET 101 n 105 MET 105 A LEU 102 n 106 LEU 106 A TYR 103 n 107 TYR 107 A ALA 104 n 108 ALA 108 A ALA 105 n 109 ALA 109 A GLU 106 n 110 GLU 110 A MET 107 n 111 MET 111 A ILE 108 n 112 ILE 112 A PRO 109 n 113 PRO 113 A LYS 110 n 114 LYS 114 A LEU 111 n 115 LEU 115 A LYS 112 n 116 LYS 116 A THR 113 n 117 THR 117 A ARG 114 n 118 ARG 118 A n 119 119 A n 120 120 A n 121 121 A n 122 122 A n 123 123 A n 124 124 A n 125 125 A n 126 126 A n 127 127 A n 128 128 A author_defined_assembly 2 dimeric B 5BU 142 A O4 5BU 8 1_555 B MG 301 C MG MG 1_555 B G 154 A O6 G 20 1_555 103.5 B 5BU 142 A O4 5BU 8 1_555 B MG 301 C MG MG 1_555 B G 155 A O6 G 21 1_555 76.4 B G 154 A O6 G 20 1_555 B MG 301 C MG MG 1_555 B G 155 A O6 G 21 1_555 83.4 B 5BU 142 A O4 5BU 8 1_555 B MG 301 C MG MG 1_555 B HOH 303 E O HOH 1_555 109.7 B G 154 A O6 G 20 1_555 B MG 301 C MG MG 1_555 B HOH 303 E O HOH 1_555 139.9 B G 155 A O6 G 21 1_555 B MG 301 C MG MG 1_555 B HOH 303 E O HOH 1_555 125.6 B 5BU 142 A O4 5BU 8 1_555 B MG 301 C MG MG 1_555 B HOH 304 E O HOH 1_555 159.7 B G 154 A O6 G 20 1_555 B MG 301 C MG MG 1_555 B HOH 304 E O HOH 1_555 79.2 B G 155 A O6 G 21 1_555 B MG 301 C MG MG 1_555 B HOH 304 E O HOH 1_555 84.0 B HOH 303 E O HOH 1_555 B MG 301 C MG MG 1_555 B HOH 304 E O HOH 1_555 77.5 B 5BU 142 A O4 5BU 8 1_555 B MG 301 C MG MG 1_555 B HOH 305 E O HOH 1_555 98.2 B G 154 A O6 G 20 1_555 B MG 301 C MG MG 1_555 B HOH 305 E O HOH 1_555 68.2 B G 155 A O6 G 21 1_555 B MG 301 C MG MG 1_555 B HOH 305 E O HOH 1_555 149.2 B HOH 303 E O HOH 1_555 B MG 301 C MG MG 1_555 B HOH 305 E O HOH 1_555 85.0 B HOH 304 E O HOH 1_555 B MG 301 C MG MG 1_555 B HOH 305 E O HOH 1_555 101.4 B G 152 A O6 G 18 1_555 B MG 302 D MG MG 1_555 B G 153 A O6 G 19 1_555 74.4 B G 152 A O6 G 18 1_555 B MG 302 D MG MG 1_555 B HOH 306 E O HOH 1_555 141.8 B G 153 A O6 G 19 1_555 B MG 302 D MG MG 1_555 B HOH 306 E O HOH 1_555 67.4 B G 152 A O6 G 18 1_555 B MG 302 D MG MG 1_555 B HOH 307 E O HOH 1_555 77.0 B G 153 A O6 G 19 1_555 B MG 302 D MG MG 1_555 B HOH 307 E O HOH 1_555 107.4 B HOH 306 E O HOH 1_555 B MG 302 D MG MG 1_555 B HOH 307 E O HOH 1_555 113.3 B G 152 A O6 G 18 1_555 B MG 302 D MG MG 1_555 B HOH 308 E O HOH 1_555 99.1 B G 153 A O6 G 19 1_555 B MG 302 D MG MG 1_555 B HOH 308 E O HOH 1_555 88.6 B HOH 306 E O HOH 1_555 B MG 302 D MG MG 1_555 B HOH 308 E O HOH 1_555 81.2 B HOH 307 E O HOH 1_555 B MG 302 D MG MG 1_555 B HOH 308 E O HOH 1_555 161.4 B G 152 A O6 G 18 1_555 B MG 302 D MG MG 1_555 B HOH 320 E O HOH 1_555 81.3 B G 153 A O6 G 19 1_555 B MG 302 D MG MG 1_555 B HOH 320 E O HOH 1_555 150.3 B HOH 306 E O HOH 1_555 B MG 302 D MG MG 1_555 B HOH 320 E O HOH 1_555 135.0 B HOH 307 E O HOH 1_555 B MG 302 D MG MG 1_555 B HOH 320 E O HOH 1_555 82.9 B HOH 308 E O HOH 1_555 B MG 302 D MG MG 1_555 B HOH 320 E O HOH 1_555 78.6 B 5BU 137 5-BROMO-URIDINE-5'-MONOPHOSPHATE A 5BU 3 U B 5BU 142 5-BROMO-URIDINE-5'-MONOPHOSPHATE A 5BU 8 U B A23 163 A A23 29 A 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O ILE 18 B O ILE 18 A N VAL 82 B N VAL 82 A N ARG 83 B N ARG 83 A O PHE 61 B O PHE 61 1 A MET 1 B MET 1 1 Y 1 A ALA 2 B ALA 2 1 Y 1 A CYS 3 B CYS 3 1 Y 1 A ALA 4 B ALA 4 1 Y 1 A THR 119 B THR 119 1 Y 1 A GLN 120 B GLN 120 1 Y 1 A LEU 121 B LEU 121 1 Y 1 A GLU 122 B GLU 122 1 Y 1 A HIS 123 B HIS 123 1 Y 1 A HIS 124 B HIS 124 1 Y 1 A HIS 125 B HIS 125 1 Y 1 A HIS 126 B HIS 126 1 Y 1 A HIS 127 B HIS 127 1 Y 1 A HIS 128 B HIS 128 1 Y 1 A A O O ARG HOH 118 213 2.17 1 B G 136 0.058 SIDE CHAIN 1 B A 149 0.064 SIDE CHAIN 1 B G 154 0.050 SIDE CHAIN 1 B A 160 0.060 SIDE CHAIN 1 -8.69 1.40 115.20 106.51 B B B C5' C4' C3' A A A 157 157 157 N 1 B B O5' C5' A A 157 157 -0.056 0.009 1.420 1.364 N protein_rep.param protein.top dna-rna-allatom-mod.param dna-rna-allatom-mod.top water_rep.param water.top mg3.param mg3.top 27.63 14.07 0.00 0.00 -6.27 0.00 -7.79 0.222 0.007 0.186 1.80 49.75 1142 25876 23740 4.8 91.7 1.00 0.35 RANDOM 1 THROUGHOUT 0.0 0.0 SAD with molecular replacement PDB ENTRY 1D4R Engh & Huber CNS bulk solvent model used 65.4191 0.417491 isotropic isotropic 0.23 0.18 5.00 0.21 0.20 1.80 49.75 271 1828 10 630 917 0.017 3.4 23.6 3.18 1.94 1.50 2.70 2.00 2.43 2.00 3.41 2.50 0.262 0.026 0.26 1.88 100 1940 8 3.1 63.9 0.237 0.020 0.237 1.98 136 2427 8 4.3 80.2 0.205 0.018 0.206 2.11 133 2898 8 4.1 94.5 0.189 0.015 0.19 2.27 159 3045 8 5.0 99.8 0.172 0.014 0.172 2.50 155 3058 8 4.8 99.8 0.193 0.015 0.192 2.86 159 3076 8 4.9 99.9 0.179 0.014 0.18 3.60 158 3073 8 4.8 99.1 0.173 0.015 0.173 49.75 142 3081 8 4.2 95.0 19.5 1.80 49.75 1JID 24024 23784 0.0 0.0 0.088 1 11.4 7.8 91.5 0.197 1.80 1.86 2.7 3.8 61.2 refinement Axel T. Brunger axel.brunger@yale.edu 1998 Fortran CNS package 1.0 data reduction DENZO data scaling SCALEPACK phasing CNS phasing SHARP Human SRP19 in complex with helix 6 of Human SRP RNA 1 N N 2 N N 3 N N 3 N N 4 N N 4 N N The asymmetric unit contains one biological assembly A ASP 11 B ASP 11 HELX_P A PHE 15 B PHE 15 5 1 5 A TYR 19 B TYR 19 HELX_P A LEU 23 B LEU 23 5 2 5 A THR 45 B THR 45 HELX_P A VAL 56 B VAL 56 1 3 12 A ASP 75 B ASP 75 HELX_P A ARG 79 B ARG 79 5 4 5 A SER 100 B SER 100 HELX_P A ILE 112 B ILE 112 1 5 13 A PRO 113 B PRO 113 HELX_P A LEU 115 B LEU 115 5 6 3 covale 1.596 both B G 136 A O3' G 2 1_555 B 5BU 137 A P 5BU 3 1_555 covale 1.576 both B 5BU 137 A O3' 5BU 3 1_555 B G 138 A P G 4 1_555 covale 1.589 both B C 141 A O3' C 7 1_555 B 5BU 142 A P 5BU 8 1_555 covale 1.609 both B 5BU 142 A O3' 5BU 8 1_555 B C 143 A P C 9 1_555 covale 1.621 both B U 162 A O3' U 28 1_555 B A23 163 A P A23 29 1_555 metalc 2.968 B 5BU 142 A O4 5BU 8 1_555 B MG 301 C MG MG 1_555 metalc 2.799 B G 152 A O6 G 18 1_555 B MG 302 D MG MG 1_555 metalc 2.711 B G 153 A O6 G 19 1_555 B MG 302 D MG MG 1_555 metalc 2.942 B G 154 A O6 G 20 1_555 B MG 301 C MG MG 1_555 metalc 2.577 B G 155 A O6 G 21 1_555 B MG 301 C MG MG 1_555 metalc 2.252 B MG 301 C MG MG 1_555 B HOH 303 E O HOH 1_555 metalc 2.259 B MG 301 C MG MG 1_555 B HOH 304 E O HOH 1_555 metalc 2.241 B MG 301 C MG MG 1_555 B HOH 305 E O HOH 1_555 metalc 2.294 B MG 302 D MG MG 1_555 B HOH 306 E O HOH 1_555 metalc 2.262 B MG 302 D MG MG 1_555 B HOH 307 E O HOH 1_555 metalc 2.260 B MG 302 D MG MG 1_555 B HOH 308 E O HOH 1_555 metalc 2.978 B MG 302 D MG MG 1_555 B HOH 320 E O HOH 1_555 hydrog TYPE_28_PAIR B G 135 A N1 G 1 1_555 B U 162 A O2 U 28 1_555 hydrog TYPE_28_PAIR B G 135 A O6 G 1 1_555 B U 162 A N3 U 28 1_555 hydrog WATSON-CRICK B G 136 A N1 G 2 1_555 B C 161 A N3 C 27 1_555 hydrog WATSON-CRICK B G 136 A N2 G 2 1_555 B C 161 A O2 C 27 1_555 hydrog WATSON-CRICK B G 136 A O6 G 2 1_555 B C 161 A N4 C 27 1_555 hydrog WATSON-CRICK B 5BU 137 A N3 5BU 3 1_555 B A 160 A N1 A 26 1_555 hydrog WATSON-CRICK B 5BU 137 A O4 5BU 3 1_555 B A 160 A N6 A 26 1_555 hydrog WATSON-CRICK B G 138 A N1 G 4 1_555 B C 159 A N3 C 25 1_555 hydrog WATSON-CRICK B G 138 A N2 G 4 1_555 B C 159 A O2 C 25 1_555 hydrog WATSON-CRICK B G 138 A O6 G 4 1_555 B C 159 A N4 C 25 1_555 hydrog A-C MISPAIR B A 139 A N6 A 5 1_555 B C 158 A O2 C 24 1_555 hydrog C-A MISPAIR B C 140 A N3 C 6 1_555 B A 157 A N6 A 23 1_555 hydrog WATSON-CRICK B C 141 A N3 C 7 1_555 B G 156 A N1 G 22 1_555 hydrog WATSON-CRICK B C 141 A N4 C 7 1_555 B G 156 A O6 G 22 1_555 hydrog WATSON-CRICK B C 141 A O2 C 7 1_555 B G 156 A N2 G 22 1_555 hydrog TYPE_28_PAIR B 5BU 142 A N3 5BU 8 1_555 B G 155 A O6 G 21 1_555 hydrog TYPE_28_PAIR B 5BU 142 A O2 5BU 8 1_555 B G 155 A N1 G 21 1_555 hydrog WATSON-CRICK B C 143 A N3 C 9 1_555 B G 154 A N1 G 20 1_555 hydrog WATSON-CRICK B C 143 A N4 C 9 1_555 B G 154 A O6 G 20 1_555 hydrog WATSON-CRICK B C 143 A O2 C 9 1_555 B G 154 A N2 G 20 1_555 hydrog WATSON-CRICK B C 144 A N3 C 10 1_555 B G 153 A N1 G 19 1_555 hydrog WATSON-CRICK B C 144 A N4 C 10 1_555 B G 153 A O6 G 19 1_555 hydrog WATSON-CRICK B C 144 A O2 C 10 1_555 B G 153 A N2 G 19 1_555 hydrog WATSON-CRICK B C 145 A N3 C 11 1_555 B G 152 A N1 G 18 1_555 hydrog WATSON-CRICK B C 145 A N4 C 11 1_555 B G 152 A O6 G 18 1_555 hydrog WATSON-CRICK B C 145 A O2 C 11 1_555 B G 152 A N2 G 18 1_555 hydrog WATSON-CRICK B G 146 A N1 G 12 1_555 B C 151 A N3 C 17 1_555 hydrog WATSON-CRICK B G 146 A N2 G 12 1_555 B C 151 A O2 C 17 1_555 hydrog WATSON-CRICK B G 146 A O6 G 12 1_555 B C 151 A N4 C 17 1_555 SIGNALING PROTEIN/RNA SIGNAL RECOGNITION PARTICLE (SRP), PROTEIN-RNA COMPLEX, GGAG TETRALOOP, SIGNALING PROTEIN-RNA COMPLEX SR19_HUMAN UNP 2 1 P09132 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNVFLEKNKMYSREWNRDVQYRG RVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQ X01037 GB 1 139 36086 GGUGACCUCCCGGGAGCGGGGGACCACCA 1 120 1JID 1 120 P09132 A 1 1 120 139 167 1JID 135 163 36086 B 2 1 29 1 expression tag LEU 121 1JID A P09132 UNP 121 1 expression tag GLU 122 1JID A P09132 UNP 122 1 expression tag HIS 123 1JID A P09132 UNP 123 1 expression tag HIS 124 1JID A P09132 UNP 124 1 expression tag HIS 125 1JID A P09132 UNP 125 1 expression tag HIS 126 1JID A P09132 UNP 126 1 expression tag HIS 127 1JID A P09132 UNP 127 1 expression tag HIS 128 1JID A P09132 UNP 128 2 C engineered mutation U 162 1JID B 36086 GB 166 28 2 A modified residue A23 163 1JID B 36086 GB 167 29 3 anti-parallel anti-parallel A ILE 16 B ILE 16 A ILE 18 B ILE 18 A ARG 81 B ARG 81 A VAL 84 B VAL 84 A VAL 60 B VAL 60 A GLU 63 B GLU 63 BINDING SITE FOR RESIDUE MG B 301 B MG 301 Software 7 BINDING SITE FOR RESIDUE MG B 302 B MG 302 Software 6 B 5BU 142 A 5BU 8 7 1_555 B G 154 A G 20 7 1_555 B G 155 A G 21 7 1_555 B G 156 A G 22 7 1_555 B HOH 303 E HOH 7 1_555 B HOH 304 E HOH 7 1_555 B HOH 305 E HOH 7 1_555 B G 152 A G 18 6 1_555 B G 153 A G 19 6 1_555 B HOH 306 E HOH 6 1_555 B HOH 307 E HOH 6 1_555 B HOH 308 E HOH 6 1_555 B HOH 320 E HOH 6 1_555 20 C 2 2 21