0.01397
0.00000
0.00000
0.00000
0.01016
0.00000
0.00000
0.00000
0.00704
0.00000
0.00000
0.00000
Qiu, X.
Janson, C.A.
Smith, W.W.
Jarvest, R.L.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
71.560
98.450
142.130
C17 H23 N3 O9
413.379
[2-AMINO-3-(4-HYDROXY-PHENYL)-PROPIONYLAMINO]- (2,4,5,8-TETRAHYDROXY-7-OXA-2-AZA-BICYCLO[3.2.1]OCT-3-YL)- ACETIC ACID
SB-219383
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Y
1
N
C
Y
2
N
C
Y
3
N
C
Y
4
N
C
Y
5
N
C
Y
6
N
C
N
7
N
C
N
8
S
C
N
9
N
C
N
10
N
N
N
11
S
C
N
12
N
C
N
13
N
O
N
14
N
O
N
15
N
N
N
16
N
O
N
17
S
C
N
18
N
N
N
19
S
C
N
20
R
C
N
21
R
C
N
22
S
C
N
23
N
O
N
24
N
O
N
25
N
C
N
26
N
O
N
27
N
O
N
28
N
O
N
29
N
O
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
N
N
54
S
C
N
55
N
C
N
56
N
O
N
57
N
C
N
58
N
O
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
N
N
67
S
C
N
68
N
C
N
69
N
O
N
70
N
C
N
71
N
C
N
72
N
C
N
73
N
N
N
74
N
C
N
75
N
N
N
76
N
N
N
77
N
O
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
N
N
94
S
C
N
95
N
C
N
96
N
O
N
97
N
C
N
98
N
C
N
99
N
O
N
100
N
N
N
101
N
O
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
N
N
111
S
C
N
112
N
C
N
113
N
O
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
O
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
N
N
127
R
C
N
128
N
C
N
129
N
O
N
130
N
C
N
131
N
S
N
132
N
O
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
N
N
141
S
C
N
142
N
C
N
143
N
O
N
144
N
C
N
145
N
C
N
146
N
C
N
147
N
O
N
148
N
N
N
149
N
O
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
N
N
161
S
C
N
162
N
C
N
163
N
O
N
164
N
C
N
165
N
C
N
166
N
C
N
167
N
O
N
168
N
O
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
N
N
180
N
C
N
181
N
C
N
182
N
O
N
183
N
O
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
N
N
190
S
C
N
191
N
C
N
192
N
O
N
193
N
C
Y
194
N
C
Y
195
N
N
Y
196
N
C
Y
197
N
C
Y
198
N
N
N
199
N
O
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
N
N
211
S
C
N
212
N
C
N
213
N
O
N
214
S
C
N
215
N
C
N
216
N
C
N
217
N
C
N
218
N
O
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
N
N
233
S
C
N
234
N
C
N
235
N
O
N
236
N
C
N
237
N
C
N
238
N
C
N
239
N
C
N
240
N
O
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
N
N
255
S
C
N
256
N
C
N
257
N
O
N
258
N
C
N
259
N
C
N
260
N
C
N
261
N
C
N
262
N
N
N
263
N
O
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
N
N
280
S
C
N
281
N
C
N
282
N
O
N
283
N
C
N
284
N
C
N
285
N
S
N
286
N
C
N
287
N
O
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
N
N
300
S
C
N
301
N
C
N
302
N
O
N
303
N
C
Y
304
N
C
Y
305
N
C
Y
306
N
C
Y
307
N
C
Y
308
N
C
Y
309
N
C
N
310
N
O
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
N
N
323
S
C
N
324
N
C
N
325
N
O
N
326
N
C
N
327
N
C
N
328
N
C
N
329
N
O
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
N
N
340
S
C
N
341
N
C
N
342
N
O
N
343
N
C
N
344
N
O
N
345
N
O
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
N
N
354
S
C
N
355
N
C
N
356
N
O
N
357
R
C
N
358
N
O
N
359
N
C
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
N
N
371
S
C
N
372
N
C
N
373
N
O
N
374
N
C
Y
375
N
C
Y
376
N
C
Y
377
N
C
Y
378
N
N
Y
379
N
C
Y
380
N
C
Y
381
N
C
Y
382
N
C
Y
383
N
C
N
384
N
O
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
N
N
398
S
C
N
399
N
C
N
400
N
O
N
401
N
C
Y
402
N
C
Y
403
N
C
Y
404
N
C
Y
405
N
C
Y
406
N
C
Y
407
N
C
N
408
N
O
N
409
N
O
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
N
N
422
S
C
N
423
N
C
N
424
N
O
N
425
N
C
N
426
N
C
N
427
N
C
N
428
N
O
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
Y
1
N
doub
Y
2
N
sing
N
3
N
sing
Y
4
N
sing
N
5
N
sing
Y
6
N
doub
N
7
N
sing
Y
8
N
sing
N
9
N
sing
Y
10
N
doub
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
doub
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
doub
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
doub
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
doub
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
doub
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
doub
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
doub
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
doub
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
doub
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
doub
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
doub
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
doub
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
doub
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
doub
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
doub
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
Y
194
N
sing
Y
195
N
doub
Y
196
N
doub
N
197
N
sing
Y
198
N
sing
N
199
N
sing
Y
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
doub
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
doub
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
doub
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
doub
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
doub
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
Y
300
N
doub
Y
301
N
sing
Y
302
N
sing
N
303
N
sing
Y
304
N
doub
N
305
N
sing
Y
306
N
doub
N
307
N
sing
Y
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
doub
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
doub
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
doub
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
Y
369
N
doub
Y
370
N
sing
Y
371
N
sing
N
372
N
sing
Y
373
N
doub
Y
374
N
sing
Y
375
N
sing
N
376
N
sing
Y
377
N
sing
Y
378
N
doub
N
379
N
sing
Y
380
N
doub
N
381
N
sing
Y
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
doub
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
Y
397
N
doub
Y
398
N
sing
Y
399
N
sing
N
400
N
sing
Y
401
N
doub
N
402
N
sing
Y
403
N
doub
N
404
N
sing
Y
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
doub
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
US
Protein Sci.
PRCIEI
0795
0961-8368
10
2008
2016
10.1110/ps.18001
11567092
Crystal structure of Staphylococcus aureus tyrosyl-tRNA synthetase in complex with a class of potent and specific inhibitors.
2001
10.2210/pdb1jii/pdb
pdb_00001jii
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
298
1
AREA DETECTOR
1996-06-06
SIEMENS
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
47655.449
tyrosyl-tRNA synthetase
6.1.1.1
1
man
polymer
413.379
[2-AMINO-3-(4-HYDROXY-PHENYL)-PROPIONYLAMINO]- (2,4,5,8-TETRAHYDROXY-7-OXA-2-AZA-BICYCLO[3.2.1]OCT-3-YL)- ACETIC ACID
1
syn
non-polymer
TYROSINE--TRNA LIGASE; TYRRS; Tyrosyl-Transfer RNA Synthetase
E.C.6.1.1.1
no
no
MTNVLIEDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHGHRPIVLIGGGTGMIGD
PSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDHGAVLVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRLE
HGISYTEFTYTILQAIDFGHLNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGKSESGAV
WLDAEKTSPYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLREAQKTLAEEVTKFIHGEDALNDAIRIS
QALFSGDLKSLSAKELKDGFKDVPQVTLSNDTTNIVEVLIETGISPSKRQAREDVNNGAIYINGERQQDVNYALAPEDKI
DGEFTIIRRGKKKYFMVNYQ
MTNVLIEDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHGHRPIVLIGGGTGMIGD
PSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDHGAVLVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRLE
HGISYTEFTYTILQAIDFGHLNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGKSESGAV
WLDAEKTSPYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLREAQKTLAEEVTKFIHGEDALNDAIRIS
QALFSGDLKSLSAKELKDGFKDVPQVTLSNDTTNIVEVLIETGISPSKRQAREDVNNGAIYINGERQQDVNYALAPEDKI
DGEFTIIRRGKKKYFMVNYQ
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Staphylococcus
Escherichia
sample
1280
Staphylococcus aureus
aureus N315
562
Escherichia coli
1
2.63
53.16
VAPOR DIFFUSION, SITTING DROP
7.25
PEG 1000, CaCl2, pH 7.25, VAPOR DIFFUSION, SITTING DROP at 298K
298
software
chem_comp_atom
chem_comp_bond
database_2
struct_site
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Derived calculations
Version format compliance
Refinement description
Data collection
Database references
Derived calculations
Refinement description
1
0
2001-10-26
1
1
2008-04-27
1
2
2011-07-13
1
3
2017-10-04
1
4
2024-02-07
1
5
2024-04-03
_software.name
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
same protein, different inhibitor
same protein, different inhibitor
same protein, different inhibitor
RCSB
Y
RCSB
2001-07-02
REL
383
[2-AMINO-3-(4-HYDROXY-PHENYL)-PROPIONYLAMINO]- (2,4,5,8-TETRAHYDROXY-7-OXA-2-AZA-BICYCLO[3.2.1]OCT-3-YL)- ACETIC ACID
B. stearothermophilus
Other
experimental model
383
321
2
383
383
421
A
n
1
1
A
THR
2
n
2
THR
2
A
ASN
3
n
3
ASN
3
A
VAL
4
n
4
VAL
4
A
LEU
5
n
5
LEU
5
A
ILE
6
n
6
ILE
6
A
GLU
7
n
7
GLU
7
A
ASP
8
n
8
ASP
8
A
LEU
9
n
9
LEU
9
A
LYS
10
n
10
LYS
10
A
TRP
11
n
11
TRP
11
A
ARG
12
n
12
ARG
12
A
GLY
13
n
13
GLY
13
A
LEU
14
n
14
LEU
14
A
ILE
15
n
15
ILE
15
A
TYR
16
n
16
TYR
16
A
GLN
17
n
17
GLN
17
A
GLN
18
n
18
GLN
18
A
THR
19
n
19
THR
19
A
ASP
20
n
20
ASP
20
A
GLU
21
n
21
GLU
21
A
GLN
22
n
22
GLN
22
A
GLY
23
n
23
GLY
23
A
ILE
24
n
24
ILE
24
A
GLU
25
n
25
GLU
25
A
ASP
26
n
26
ASP
26
A
LEU
27
n
27
LEU
27
A
LEU
28
n
28
LEU
28
A
ASN
29
n
29
ASN
29
A
LYS
30
n
30
LYS
30
A
GLU
31
n
31
GLU
31
A
GLN
32
n
32
GLN
32
A
VAL
33
n
33
VAL
33
A
THR
34
n
34
THR
34
A
LEU
35
n
35
LEU
35
A
TYR
36
n
36
TYR
36
A
CYS
37
n
37
CYS
37
A
GLY
38
n
38
GLY
38
A
ALA
39
n
39
ALA
39
A
ASP
40
n
40
ASP
40
A
PRO
41
n
41
PRO
41
A
THR
42
n
42
THR
42
A
ALA
43
n
43
ALA
43
A
ASP
44
n
44
ASP
44
A
SER
45
n
45
SER
45
A
LEU
46
n
46
LEU
46
A
HIS
47
n
47
HIS
47
A
ILE
48
n
48
ILE
48
A
GLY
49
n
49
GLY
49
A
HIS
50
n
50
HIS
50
A
LEU
51
n
51
LEU
51
A
LEU
52
n
52
LEU
52
A
PRO
53
n
53
PRO
53
A
PHE
54
n
54
PHE
54
A
LEU
55
n
55
LEU
55
A
THR
56
n
56
THR
56
A
LEU
57
n
57
LEU
57
A
ARG
58
n
58
ARG
58
A
ARG
59
n
59
ARG
59
A
PHE
60
n
60
PHE
60
A
GLN
61
n
61
GLN
61
A
GLU
62
n
62
GLU
62
A
HIS
63
n
63
HIS
63
A
GLY
64
n
64
GLY
64
A
HIS
65
n
65
HIS
65
A
ARG
66
n
66
ARG
66
A
PRO
67
n
67
PRO
67
A
ILE
68
n
68
ILE
68
A
VAL
69
n
69
VAL
69
A
LEU
70
n
70
LEU
70
A
ILE
71
n
71
ILE
71
A
GLY
72
n
72
GLY
72
A
GLY
73
n
73
GLY
73
A
GLY
74
n
74
GLY
74
A
THR
75
n
75
THR
75
A
GLY
76
n
76
GLY
76
A
MET
77
n
77
MET
77
A
ILE
78
n
78
ILE
78
A
GLY
79
n
79
GLY
79
A
ASP
80
n
80
ASP
80
A
PRO
81
n
81
PRO
81
A
SER
82
n
82
SER
82
A
GLY
83
n
83
GLY
83
A
LYS
84
n
84
LYS
84
A
SER
85
n
85
SER
85
A
GLU
86
n
86
GLU
86
A
GLU
87
n
87
GLU
87
A
ARG
88
n
88
ARG
88
A
VAL
89
n
89
VAL
89
A
LEU
90
n
90
LEU
90
A
GLN
91
n
91
GLN
91
A
THR
92
n
92
THR
92
A
GLU
93
n
93
GLU
93
A
GLU
94
n
94
GLU
94
A
GLN
95
n
95
GLN
95
A
VAL
96
n
96
VAL
96
A
ASP
97
n
97
ASP
97
A
LYS
98
n
98
LYS
98
A
ASN
99
n
99
ASN
99
A
ILE
100
n
100
ILE
100
A
GLU
101
n
101
GLU
101
A
GLY
102
n
102
GLY
102
A
ILE
103
n
103
ILE
103
A
SER
104
n
104
SER
104
A
LYS
105
n
105
LYS
105
A
GLN
106
n
106
GLN
106
A
MET
107
n
107
MET
107
A
HIS
108
n
108
HIS
108
A
ASN
109
n
109
ASN
109
A
ILE
110
n
110
ILE
110
A
PHE
111
n
111
PHE
111
A
GLU
112
n
112
GLU
112
A
PHE
113
n
113
PHE
113
A
GLY
114
n
114
GLY
114
A
THR
115
n
115
THR
115
A
ASP
116
n
116
ASP
116
A
HIS
117
n
117
HIS
117
A
GLY
118
n
118
GLY
118
A
ALA
119
n
119
ALA
119
A
VAL
120
n
120
VAL
120
A
LEU
121
n
121
LEU
121
A
VAL
122
n
122
VAL
122
A
ASN
123
n
123
ASN
123
A
ASN
124
n
124
ASN
124
A
ARG
125
n
125
ARG
125
A
ASP
126
n
126
ASP
126
A
TRP
127
n
127
TRP
127
A
LEU
128
n
128
LEU
128
A
GLY
129
n
129
GLY
129
A
GLN
130
n
130
GLN
130
A
ILE
131
n
131
ILE
131
A
SER
132
n
132
SER
132
A
LEU
133
n
133
LEU
133
A
ILE
134
n
134
ILE
134
A
SER
135
n
135
SER
135
A
PHE
136
n
136
PHE
136
A
LEU
137
n
137
LEU
137
A
ARG
138
n
138
ARG
138
A
ASP
139
n
139
ASP
139
A
TYR
140
n
140
TYR
140
A
GLY
141
n
141
GLY
141
A
LYS
142
n
142
LYS
142
A
HIS
143
n
143
HIS
143
A
VAL
144
n
144
VAL
144
A
GLY
145
n
145
GLY
145
A
VAL
146
n
146
VAL
146
A
ASN
147
n
147
ASN
147
A
TYR
148
n
148
TYR
148
A
MET
149
n
149
MET
149
A
LEU
150
n
150
LEU
150
A
GLY
151
n
151
GLY
151
A
LYS
152
n
152
LYS
152
A
ASP
153
n
153
ASP
153
A
SER
154
n
154
SER
154
A
ILE
155
n
155
ILE
155
A
GLN
156
n
156
GLN
156
A
SER
157
n
157
SER
157
A
ARG
158
n
158
ARG
158
A
LEU
159
n
159
LEU
159
A
GLU
160
n
160
GLU
160
A
HIS
161
n
161
HIS
161
A
GLY
162
n
162
GLY
162
A
ILE
163
n
163
ILE
163
A
SER
164
n
164
SER
164
A
TYR
165
n
165
TYR
165
A
THR
166
n
166
THR
166
A
GLU
167
n
167
GLU
167
A
PHE
168
n
168
PHE
168
A
THR
169
n
169
THR
169
A
TYR
170
n
170
TYR
170
A
THR
171
n
171
THR
171
A
ILE
172
n
172
ILE
172
A
LEU
173
n
173
LEU
173
A
GLN
174
n
174
GLN
174
A
ALA
175
n
175
ALA
175
A
ILE
176
n
176
ILE
176
A
ASP
177
n
177
ASP
177
A
PHE
178
n
178
PHE
178
A
GLY
179
n
179
GLY
179
A
HIS
180
n
180
HIS
180
A
LEU
181
n
181
LEU
181
A
ASN
182
n
182
ASN
182
A
ARG
183
n
183
ARG
183
A
GLU
184
n
184
GLU
184
A
LEU
185
n
185
LEU
185
A
ASN
186
n
186
ASN
186
A
CYS
187
n
187
CYS
187
A
LYS
188
n
188
LYS
188
A
ILE
189
n
189
ILE
189
A
GLN
190
n
190
GLN
190
A
VAL
191
n
191
VAL
191
A
GLY
192
n
192
GLY
192
A
GLY
193
n
193
GLY
193
A
SER
194
n
194
SER
194
A
ASP
195
n
195
ASP
195
A
GLN
196
n
196
GLN
196
A
TRP
197
n
197
TRP
197
A
GLY
198
n
198
GLY
198
A
ASN
199
n
199
ASN
199
A
ILE
200
n
200
ILE
200
A
THR
201
n
201
THR
201
A
SER
202
n
202
SER
202
A
GLY
203
n
203
GLY
203
A
ILE
204
n
204
ILE
204
A
GLU
205
n
205
GLU
205
A
LEU
206
n
206
LEU
206
A
MET
207
n
207
MET
207
A
ARG
208
n
208
ARG
208
A
ARG
209
n
209
ARG
209
A
MET
210
n
210
MET
210
A
TYR
211
n
211
TYR
211
A
GLY
212
n
212
GLY
212
A
GLN
213
n
213
GLN
213
A
THR
214
n
214
THR
214
A
ASP
215
n
215
ASP
215
A
ALA
216
n
216
ALA
216
A
TYR
217
n
217
TYR
217
A
GLY
218
n
218
GLY
218
A
LEU
219
n
219
LEU
219
A
THR
220
n
220
THR
220
A
ILE
221
n
221
ILE
221
A
PRO
222
n
222
PRO
222
A
LEU
223
n
223
LEU
223
A
VAL
224
n
224
VAL
224
A
THR
225
n
225
THR
225
A
LYS
226
n
226
LYS
226
A
SER
227
n
227
SER
227
A
ASP
228
n
228
ASP
228
A
GLY
229
n
229
GLY
229
A
LYS
230
n
230
LYS
230
A
LYS
231
n
231
LYS
231
A
PHE
232
n
232
PHE
232
A
GLY
233
n
233
GLY
233
A
LYS
234
n
234
LYS
234
A
SER
235
n
235
SER
235
A
GLU
236
n
236
GLU
236
A
SER
237
n
237
SER
237
A
GLY
238
n
238
GLY
238
A
ALA
239
n
239
ALA
239
A
VAL
240
n
240
VAL
240
A
TRP
241
n
241
TRP
241
A
LEU
242
n
242
LEU
242
A
ASP
243
n
243
ASP
243
A
ALA
244
n
244
ALA
244
A
GLU
245
n
245
GLU
245
A
LYS
246
n
246
LYS
246
A
THR
247
n
247
THR
247
A
SER
248
n
248
SER
248
A
PRO
249
n
249
PRO
249
A
TYR
250
n
250
TYR
250
A
GLU
251
n
251
GLU
251
A
PHE
252
n
252
PHE
252
A
TYR
253
n
253
TYR
253
A
GLN
254
n
254
GLN
254
A
PHE
255
n
255
PHE
255
A
TRP
256
n
256
TRP
256
A
ILE
257
n
257
ILE
257
A
ASN
258
n
258
ASN
258
A
GLN
259
n
259
GLN
259
A
SER
260
n
260
SER
260
A
ASP
261
n
261
ASP
261
A
GLU
262
n
262
GLU
262
A
ASP
263
n
263
ASP
263
A
VAL
264
n
264
VAL
264
A
ILE
265
n
265
ILE
265
A
LYS
266
n
266
LYS
266
A
PHE
267
n
267
PHE
267
A
LEU
268
n
268
LEU
268
A
LYS
269
n
269
LYS
269
A
TYR
270
n
270
TYR
270
A
PHE
271
n
271
PHE
271
A
THR
272
n
272
THR
272
A
PHE
273
n
273
PHE
273
A
LEU
274
n
274
LEU
274
A
GLY
275
n
275
GLY
275
A
LYS
276
n
276
LYS
276
A
GLU
277
n
277
GLU
277
A
GLU
278
n
278
GLU
278
A
ILE
279
n
279
ILE
279
A
ASP
280
n
280
ASP
280
A
ARG
281
n
281
ARG
281
A
LEU
282
n
282
LEU
282
A
GLU
283
n
283
GLU
283
A
GLN
284
n
284
GLN
284
A
SER
285
n
285
SER
285
A
LYS
286
n
286
LYS
286
A
ASN
287
n
287
ASN
287
A
GLU
288
n
288
GLU
288
A
ALA
289
n
289
ALA
289
A
PRO
290
n
290
PRO
290
A
HIS
291
n
291
HIS
291
A
LEU
292
n
292
LEU
292
A
ARG
293
n
293
ARG
293
A
GLU
294
n
294
GLU
294
A
ALA
295
n
295
ALA
295
A
GLN
296
n
296
GLN
296
A
LYS
297
n
297
LYS
297
A
THR
298
n
298
THR
298
A
LEU
299
n
299
LEU
299
A
ALA
300
n
300
ALA
300
A
GLU
301
n
301
GLU
301
A
GLU
302
n
302
GLU
302
A
VAL
303
n
303
VAL
303
A
THR
304
n
304
THR
304
A
LYS
305
n
305
LYS
305
A
PHE
306
n
306
PHE
306
A
ILE
307
n
307
ILE
307
A
HIS
308
n
308
HIS
308
A
GLY
309
n
309
GLY
309
A
GLU
310
n
310
GLU
310
A
ASP
311
n
311
ASP
311
A
ALA
312
n
312
ALA
312
A
LEU
313
n
313
LEU
313
A
ASN
314
n
314
ASN
314
A
ASP
315
n
315
ASP
315
A
ALA
316
n
316
ALA
316
A
ILE
317
n
317
ILE
317
A
ARG
318
n
318
ARG
318
A
ILE
319
n
319
ILE
319
A
SER
320
n
320
SER
320
A
n
321
321
A
n
322
322
A
n
323
323
A
n
324
324
A
n
325
325
A
n
326
326
A
n
327
327
A
n
328
328
A
n
329
329
A
n
330
330
A
n
331
331
A
n
332
332
A
n
333
333
A
n
334
334
A
n
335
335
A
n
336
336
A
n
337
337
A
n
338
338
A
n
339
339
A
n
340
340
A
n
341
341
A
n
342
342
A
n
343
343
A
n
344
344
A
n
345
345
A
n
346
346
A
n
347
347
A
n
348
348
A
n
349
349
A
n
350
350
A
n
351
351
A
n
352
352
A
n
353
353
A
n
354
354
A
n
355
355
A
n
356
356
A
n
357
357
A
n
358
358
A
n
359
359
A
n
360
360
A
n
361
361
A
n
362
362
A
n
363
363
A
n
364
364
A
n
365
365
A
n
366
366
A
n
367
367
A
n
368
368
A
n
369
369
A
n
370
370
A
n
371
371
A
n
372
372
A
n
373
373
A
n
374
374
A
n
375
375
A
n
376
376
A
n
377
377
A
n
378
378
A
n
379
379
A
n
380
380
A
n
381
381
A
n
382
382
A
n
383
383
A
n
384
384
A
n
385
385
A
n
386
386
A
n
387
387
A
n
388
388
A
n
389
389
A
n
390
390
A
n
391
391
A
n
392
392
A
n
393
393
A
n
394
394
A
n
395
395
A
n
396
396
A
n
397
397
A
n
398
398
A
n
399
399
A
n
400
400
A
n
401
401
A
n
402
402
A
n
403
403
A
n
404
404
A
n
405
405
A
n
406
406
A
n
407
407
A
n
408
408
A
n
409
409
A
n
410
410
A
n
411
411
A
n
412
412
A
n
413
413
A
n
414
414
A
n
415
415
A
n
416
416
A
n
417
417
A
n
418
418
A
n
419
419
A
n
420
420
A
author_defined_assembly
2
dimeric
software_defined_assembly
PISA,PQS
2
dimeric
4580
-38
27850
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
3_556
-x,y,-z+3/2
crystal symmetry operation
0.0000000000
0.0000000000
213.1950000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
4_556
x,-y,-z+1
crystal symmetry operation
0.0000000000
0.0000000000
142.1300000000
A
O
GLN
17
A
O
GLN
17
A
N
THR
220
A
N
THR
220
A
N
LEU
219
A
N
LEU
219
A
O
GLN
190
A
O
GLN
190
A
N
ILE
189
A
N
ILE
189
A
O
THR
34
A
O
THR
34
A
N
LEU
35
A
N
LEU
35
A
O
ARG
66
A
O
ARG
66
A
N
VAL
69
A
N
VAL
69
A
O
VAL
120
A
O
VAL
120
1
A
MET
1
A
MET
1
1
Y
1
A
GLN
321
A
GLN
321
1
Y
1
A
ALA
322
A
ALA
322
1
Y
1
A
LEU
323
A
LEU
323
1
Y
1
A
PHE
324
A
PHE
324
1
Y
1
A
SER
325
A
SER
325
1
Y
1
A
GLY
326
A
GLY
326
1
Y
1
A
ASP
327
A
ASP
327
1
Y
1
A
LEU
328
A
LEU
328
1
Y
1
A
LYS
329
A
LYS
329
1
Y
1
A
SER
330
A
SER
330
1
Y
1
A
LEU
331
A
LEU
331
1
Y
1
A
SER
332
A
SER
332
1
Y
1
A
ALA
333
A
ALA
333
1
Y
1
A
LYS
334
A
LYS
334
1
Y
1
A
GLU
335
A
GLU
335
1
Y
1
A
LEU
336
A
LEU
336
1
Y
1
A
LYS
337
A
LYS
337
1
Y
1
A
ASP
338
A
ASP
338
1
Y
1
A
GLY
339
A
GLY
339
1
Y
1
A
PHE
340
A
PHE
340
1
Y
1
A
LYS
341
A
LYS
341
1
Y
1
A
ASP
342
A
ASP
342
1
Y
1
A
VAL
343
A
VAL
343
1
Y
1
A
PRO
344
A
PRO
344
1
Y
1
A
GLN
345
A
GLN
345
1
Y
1
A
VAL
346
A
VAL
346
1
Y
1
A
THR
347
A
THR
347
1
Y
1
A
LEU
348
A
LEU
348
1
Y
1
A
SER
349
A
SER
349
1
Y
1
A
ASN
350
A
ASN
350
1
Y
1
A
ASP
351
A
ASP
351
1
Y
1
A
THR
352
A
THR
352
1
Y
1
A
THR
353
A
THR
353
1
Y
1
A
ASN
354
A
ASN
354
1
Y
1
A
ILE
355
A
ILE
355
1
Y
1
A
VAL
356
A
VAL
356
1
Y
1
A
GLU
357
A
GLU
357
1
Y
1
A
VAL
358
A
VAL
358
1
Y
1
A
LEU
359
A
LEU
359
1
Y
1
A
ILE
360
A
ILE
360
1
Y
1
A
GLU
361
A
GLU
361
1
Y
1
A
THR
362
A
THR
362
1
Y
1
A
GLY
363
A
GLY
363
1
Y
1
A
ILE
364
A
ILE
364
1
Y
1
A
SER
365
A
SER
365
1
Y
1
A
PRO
366
A
PRO
366
1
Y
1
A
SER
367
A
SER
367
1
Y
1
A
LYS
368
A
LYS
368
1
Y
1
A
ARG
369
A
ARG
369
1
Y
1
A
GLN
370
A
GLN
370
1
Y
1
A
ALA
371
A
ALA
371
1
Y
1
A
ARG
372
A
ARG
372
1
Y
1
A
GLU
373
A
GLU
373
1
Y
1
A
ASP
374
A
ASP
374
1
Y
1
A
VAL
375
A
VAL
375
1
Y
1
A
ASN
376
A
ASN
376
1
Y
1
A
ASN
377
A
ASN
377
1
Y
1
A
GLY
378
A
GLY
378
1
Y
1
A
ALA
379
A
ALA
379
1
Y
1
A
ILE
380
A
ILE
380
1
Y
1
A
TYR
381
A
TYR
381
1
Y
1
A
ILE
382
A
ILE
382
1
Y
1
A
ASN
383
A
ASN
383
1
Y
1
A
GLY
384
A
GLY
384
1
Y
1
A
GLU
385
A
GLU
385
1
Y
1
A
ARG
386
A
ARG
386
1
Y
1
A
GLN
387
A
GLN
387
1
Y
1
A
GLN
388
A
GLN
388
1
Y
1
A
ASP
389
A
ASP
389
1
Y
1
A
VAL
390
A
VAL
390
1
Y
1
A
ASN
391
A
ASN
391
1
Y
1
A
TYR
392
A
TYR
392
1
Y
1
A
ALA
393
A
ALA
393
1
Y
1
A
LEU
394
A
LEU
394
1
Y
1
A
ALA
395
A
ALA
395
1
Y
1
A
PRO
396
A
PRO
396
1
Y
1
A
GLU
397
A
GLU
397
1
Y
1
A
ASP
398
A
ASP
398
1
Y
1
A
LYS
399
A
LYS
399
1
Y
1
A
ILE
400
A
ILE
400
1
Y
1
A
ASP
401
A
ASP
401
1
Y
1
A
GLY
402
A
GLY
402
1
Y
1
A
GLU
403
A
GLU
403
1
Y
1
A
PHE
404
A
PHE
404
1
Y
1
A
THR
405
A
THR
405
1
Y
1
A
ILE
406
A
ILE
406
1
Y
1
A
ILE
407
A
ILE
407
1
Y
1
A
ARG
408
A
ARG
408
1
Y
1
A
ARG
409
A
ARG
409
1
Y
1
A
GLY
410
A
GLY
410
1
Y
1
A
LYS
411
A
LYS
411
1
Y
1
A
LYS
412
A
LYS
412
1
Y
1
A
LYS
413
A
LYS
413
1
Y
1
A
TYR
414
A
TYR
414
1
Y
1
A
PHE
415
A
PHE
415
1
Y
1
A
MET
416
A
MET
416
1
Y
1
A
VAL
417
A
VAL
417
1
Y
1
A
ASN
418
A
ASN
418
1
Y
1
A
TYR
419
A
TYR
419
1
Y
1
A
GLN
420
A
GLN
420
1
Y
1
A
TYR
250
0.089
SIDE CHAIN
1
A
ASN
3
169.06
25.85
1
A
GLN
17
-171.39
143.58
1
A
ALA
43
-171.12
-177.29
1
A
ILE
48
-30.54
-39.22
1
A
LEU
52
-53.96
-71.19
1
A
MET
77
-43.06
-18.93
1
A
LYS
84
-47.53
159.97
1
A
SER
85
-143.54
43.27
1
A
ARG
88
-69.02
-148.86
1
A
VAL
89
-168.54
100.37
1
A
HIS
108
-50.83
-0.51
1
A
HIS
117
-151.72
78.55
1
A
ALA
119
51.00
113.06
1
A
ASN
124
-63.02
6.73
1
A
ILE
131
-37.20
125.55
1
A
ARG
138
-57.77
-82.41
1
A
SER
154
-67.92
-84.85
1
A
LEU
159
-38.12
-39.67
1
A
ASN
186
99.06
19.84
1
A
TYR
211
-157.75
-9.00
1
A
GLN
213
18.83
82.35
1
A
THR
214
-61.41
51.44
1
A
ASP
215
79.83
51.38
1
A
PRO
222
-73.53
-167.12
1
A
LYS
231
-18.32
73.27
1
A
PHE
232
-37.91
144.11
1
A
VAL
240
-63.50
82.41
1
A
LEU
242
-71.08
21.55
1
A
LYS
246
-165.25
-35.55
1
A
THR
247
-160.71
104.78
1
A
PHE
252
-63.15
-74.43
1
A
TYR
253
-21.88
-78.89
1
A
SER
260
-27.08
84.42
1
A
ASP
261
2.22
-50.56
1
A
GLU
262
-55.08
-75.54
1
A
VAL
264
-102.88
-67.64
1
A
ALA
295
-54.82
-73.44
1
A
GLN
296
-46.68
-9.02
1
A
LEU
299
-61.34
-79.95
1
A
ILE
319
178.40
22.76
0.3350000
0.2690000
3.2
8.0
350
7179
5.0
random
1
THROUGHOUT
2.0
MOLECULAR REPLACEMENT
B. stearothermophilus
3.2
8.0
0
2585
29
0
2556
0.010
1.9
3.2
27.0
1JII
8608
8530
2.0
1.0
0.1220000
1
7.9
4
99
0.2960000
3.20
3.24
1.9
1
4
99
model building
X-PLOR
refinement
X-PLOR
3.1
data reduction
X-GEN
data scaling
X-GEN
phasing
X-PLOR
Crystal structure of S. aureus TyrRS in complex with SB-219383
1
N
N
2
N
N
the biological assembly is a dimer generated from the monomer in ASU
and the operation -x,y,-z+1/2 ---- operation 3
A
ASN
3
A
ASN
3
HELX_P
A
GLY
13
A
GLY
13
1
1
11
A
ASP
20
A
ASP
20
HELX_P
A
GLU
31
A
GLU
31
1
2
12
A
HIS
47
A
HIS
47
HELX_P
A
GLN
61
A
GLN
61
1
3
15
A
THR
75
A
THR
75
HELX_P
A
GLY
79
A
GLY
79
5
4
5
A
THR
92
A
THR
92
HELX_P
A
PHE
111
A
PHE
111
1
5
20
A
ASN
124
A
ASN
124
HELX_P
A
GLY
129
A
GLY
129
1
6
6
A
SER
132
A
SER
132
HELX_P
A
TYR
140
A
TYR
140
1
7
9
A
GLY
141
A
GLY
141
HELX_P
A
VAL
144
A
VAL
144
5
8
4
A
GLY
145
A
GLY
145
HELX_P
A
LEU
150
A
LEU
150
1
9
6
A
SER
154
A
SER
154
HELX_P
A
GLY
162
A
GLY
162
1
10
9
A
SER
164
A
SER
164
HELX_P
A
LEU
185
A
LEU
185
1
11
22
A
GLN
196
A
GLN
196
HELX_P
A
TYR
211
A
TYR
211
1
12
16
A
SER
248
A
SER
248
HELX_P
A
ASN
258
A
ASN
258
1
13
11
A
SER
260
A
SER
260
HELX_P
A
ASP
263
A
ASP
263
5
14
4
A
VAL
264
A
VAL
264
HELX_P
A
THR
272
A
THR
272
1
15
9
A
GLY
275
A
GLY
275
HELX_P
A
ALA
289
A
ALA
289
1
16
15
A
PRO
290
A
PRO
290
HELX_P
A
ARG
293
A
ARG
293
5
17
4
A
GLU
294
A
GLU
294
HELX_P
A
GLY
309
A
GLY
309
1
18
16
A
GLU
310
A
GLU
310
HELX_P
A
ARG
318
A
ARG
318
1
19
9
LIGASE
tyrosyl-trna synthetase, staphylococcus aureus, truncation, structure based inhibitor design, LIGASE
BAB42818
GB
1
1
13701524
MTNVLIEDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHGHRPIVLIGGGTGMIGD
PSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDHGAVLVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRLE
HGISYTEFTYTILQAIDFGHLNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGKSESGAV
WLDAEKTSPYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLREAQKTLAEEVTKFIHGEDALNDAIRIS
QALFSGDLKSLSAKELKDGFKDVPQVTLSNDTTNIVEVLIETGISPSKRQAREDVNNGAIYINGERQQDVNYALAPEDKI
DGEFTIIRRGKKKYFMVNYQ
1
420
1JII
1
420
13701524
A
1
1
420
6
anti-parallel
parallel
parallel
parallel
parallel
A
GLN
17
A
GLN
17
A
GLN
18
A
GLN
18
A
TYR
217
A
TYR
217
A
ILE
221
A
ILE
221
A
ILE
189
A
ILE
189
A
GLY
193
A
GLY
193
A
THR
34
A
THR
34
A
ALA
39
A
ALA
39
A
ARG
66
A
ARG
66
A
ILE
71
A
ILE
71
A
VAL
120
A
VAL
120
A
ASN
123
A
ASN
123
BINDING SITE FOR RESIDUE 383 A 421
A
383
421
Software
15
A
TYR
36
A
TYR
36
15
1_555
A
GLY
38
A
GLY
38
15
1_555
A
ALA
39
A
ALA
39
15
1_555
A
ASP
40
A
ASP
40
15
1_555
A
GLY
49
A
GLY
49
15
1_555
A
HIS
50
A
HIS
50
15
1_555
A
PRO
53
A
PRO
53
15
1_555
A
LEU
70
A
LEU
70
15
1_555
A
ASP
80
A
ASP
80
15
1_555
A
ASN
124
A
ASN
124
15
1_555
A
TYR
170
A
TYR
170
15
1_555
A
GLN
174
A
GLN
174
15
1_555
A
ASP
177
A
ASP
177
15
1_555
A
ASP
195
A
ASP
195
15
1_555
A
GLN
196
A
GLN
196
15
1_555
20
orthorhombic
C 2 2 21