0.012657
0.000000
0.000000
0.000000
0.012657
0.000000
0.000000
0.000000
0.026212
0.00000
0.00000
0.00000
Datta, S.
Biswal, B.K.
Vijayan, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
79.006
79.006
38.151
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C6 H12 O6
180.156
beta-D-fructofuranose
beta-D-fructose; D-fructose; fructose
D-saccharide, beta linking
C6 H12 O6
180.156
alpha-D-glucopyranose
alpha-D-glucose; D-glucose; glucose
D-saccharide, alpha linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
C
N
89
R
C
N
90
S
C
N
91
S
C
N
92
R
C
N
93
N
C
N
94
N
O
N
95
N
O
N
96
N
O
N
97
N
O
N
98
N
O
N
99
N
O
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
S
C
N
113
R
C
N
114
S
C
N
115
S
C
N
116
R
C
N
117
N
C
N
118
N
O
N
119
N
O
N
120
N
O
N
121
N
O
N
122
N
O
N
123
N
O
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
N
N
137
S
C
N
138
N
C
N
139
N
O
N
140
N
C
N
141
N
C
N
142
N
C
N
143
N
O
N
144
N
N
N
145
N
O
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
N
N
157
S
C
N
158
N
C
N
159
N
O
N
160
N
C
N
161
N
C
N
162
N
C
N
163
N
O
N
164
N
O
N
165
N
O
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
N
N
176
N
C
N
177
N
C
N
178
N
O
N
179
N
O
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
N
N
186
S
C
N
187
N
C
N
188
N
O
N
189
N
C
Y
190
N
C
Y
191
N
N
Y
192
N
C
Y
193
N
C
Y
194
N
N
N
195
N
O
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
O
N
207
N
H
N
208
N
H
N
209
N
N
N
210
S
C
N
211
N
C
N
212
N
O
N
213
S
C
N
214
N
C
N
215
N
C
N
216
N
C
N
217
N
O
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
N
N
232
S
C
N
233
N
C
N
234
N
O
N
235
N
C
N
236
N
C
N
237
N
C
N
238
N
C
N
239
N
O
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
N
N
254
S
C
N
255
N
C
N
256
N
O
N
257
N
C
N
258
N
C
N
259
N
C
N
260
N
C
N
261
N
N
N
262
N
O
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
N
N
279
S
C
N
280
N
C
N
281
N
O
N
282
N
C
N
283
N
C
N
284
N
S
N
285
N
C
N
286
N
O
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
N
N
299
S
C
N
300
N
C
N
301
N
O
N
302
N
C
Y
303
N
C
Y
304
N
C
Y
305
N
C
Y
306
N
C
Y
307
N
C
Y
308
N
C
N
309
N
O
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
N
326
N
C
N
327
N
C
N
328
N
O
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
N
N
339
S
C
N
340
N
C
N
341
N
O
N
342
N
C
N
343
N
O
N
344
N
O
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
N
N
353
S
C
N
354
N
C
N
355
N
O
N
356
R
C
N
357
N
O
N
358
N
C
N
359
N
O
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
N
N
370
S
C
N
371
N
C
N
372
N
O
N
373
N
C
Y
374
N
C
Y
375
N
C
Y
376
N
C
Y
377
N
N
Y
378
N
C
Y
379
N
C
Y
380
N
C
Y
381
N
C
Y
382
N
C
N
383
N
O
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
N
N
397
S
C
N
398
N
C
N
399
N
O
N
400
N
C
Y
401
N
C
Y
402
N
C
Y
403
N
C
Y
404
N
C
Y
405
N
C
Y
406
N
C
N
407
N
O
N
408
N
O
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
N
N
421
S
C
N
422
N
C
N
423
N
O
N
424
N
C
N
425
N
C
N
426
N
C
N
427
N
O
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
doub
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
doub
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
doub
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
doub
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
Y
188
N
sing
Y
189
N
doub
Y
190
N
doub
N
191
N
sing
Y
192
N
sing
N
193
N
sing
Y
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
doub
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
doub
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
doub
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
doub
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
doub
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
Y
296
N
doub
Y
297
N
sing
Y
298
N
sing
N
299
N
sing
Y
300
N
doub
N
301
N
sing
Y
302
N
doub
N
303
N
sing
Y
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
doub
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
doub
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
doub
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
doub
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
Y
365
N
doub
Y
366
N
sing
Y
367
N
sing
N
368
N
sing
Y
369
N
doub
Y
370
N
sing
Y
371
N
sing
N
372
N
sing
Y
373
N
sing
Y
374
N
doub
N
375
N
sing
Y
376
N
doub
N
377
N
sing
Y
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
doub
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
Y
393
N
doub
Y
394
N
sing
Y
395
N
sing
N
396
N
sing
Y
397
N
doub
N
398
N
sing
Y
399
N
doub
N
400
N
sing
Y
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
doub
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
57
1614
1620
10.1107/S090744490101280X
11679726
The effect of stabilizing additives on the structure and hydration of proteins: a study involving tetragonal lysozyme.
2001
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
56
1110
1119
10.1107/S0907444900008866
Hydration, Mobility and Accessibility of Lysozyme: Strucutres of a Ph 6.5 Orthorhombic Form and its Low-Humidity Variant and a Comparative Study Involving 20 Crystallographically Independent Molecules
2000
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
49
234
245
10.1107/S090744499200653X
Protein Hydration and Water Structure: X-Ray Analysis of a Closely Packed Protein Crystal with Very Low Solvent Content
1993
10.2210/pdb1jj0/pdb
pdb_00001jj0
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
293
1
IMAGE PLATE
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
14331.160
LYSOZYME
3.2.1.17
1
nat
polymer
342.297
beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
1
man
branched
18.015
water
145
nat
water
1,4-BETA-N-ACETYLMURAMIDASE C; ALLERGEN GAL D 4; GAL D IV
sucrose
E.C.3.2.1.17
no
no
KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC
SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC
SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
chicken
Gallus
sample
CYTOPLASM
9031
Gallus gallus
EGG WHITE
1
2.08
40.77
LIQUID DIFFUSION
4.6
Na-acetate buffer, pH 4.6, 10% NaCl, 30% sucrose, LIQUID DIFFUSION at 293K
293
software
atom_site
chem_comp
entity
entity_name_com
pdbx_branch_scheme
pdbx_chem_comp_identifier
pdbx_entity_branch
pdbx_entity_branch_descriptor
pdbx_entity_branch_link
pdbx_entity_branch_list
pdbx_entity_nonpoly
pdbx_molecule_features
pdbx_nonpoly_scheme
struct_conn
struct_conn_type
struct_site
struct_site_gen
chem_comp
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Carbohydrate remediation
repository
Remediation
Version format compliance
Version format compliance
Refinement description
Atomic model
Data collection
Derived calculations
Non-polymer description
Structure summary
Data collection
Database references
Refinement description
Structure summary
1
0
2001-11-02
1
1
2008-04-27
1
2
2011-07-13
1
3
2017-10-04
2
0
2020-07-29
2
1
2023-08-16
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.type_symbol
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.id
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.type
_entity.formula_weight
_entity.pdbx_description
_entity.type
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
SUC
2380
n
B
GLC
1
SUC
2380
n
B
FRU
2
DFrufb
b-D-fructofuranose
b-D-Fruf
Fru
DGlcpa
a-D-glucopyranose
a-D-Glcp
Glc
RCSB
Y
RCSB
2001-07-03
REL
REL
oligosaccharide
DFrufb2-1DGlcpa
2
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/2,2,1/[ha122h-2b_2-5][a2122h-1a_1-5]/1-2/a2-b1
2
PDB2Glycan
1.1.0
WURCS
[][b-D-Fruf]{[(2+1)][a-D-Glcp]{}}
2
PDB-CARE
LINUCS
C1
O2
GLC
FRU
1
2
2
O1
HO2
sing
n
n
HOH
water
193L
PDB ENTRY 193L
PDB
experimental model
Nutrient
oligosaccharide with reducing-end-to-reducing-end glycosidic bond
sucrose
Oligosaccharide
HOH
130
3
HOH
HOH
130
A
HOH
131
3
HOH
HOH
131
A
HOH
132
3
HOH
HOH
132
A
HOH
133
3
HOH
HOH
133
A
HOH
134
3
HOH
HOH
134
A
HOH
135
3
HOH
HOH
135
A
HOH
136
3
HOH
HOH
136
A
HOH
137
3
HOH
HOH
137
A
HOH
138
3
HOH
HOH
138
A
HOH
139
3
HOH
HOH
139
A
HOH
140
3
HOH
HOH
140
A
HOH
141
3
HOH
HOH
141
A
HOH
142
3
HOH
HOH
142
A
HOH
143
3
HOH
HOH
143
A
HOH
144
3
HOH
HOH
144
A
HOH
145
3
HOH
HOH
145
A
HOH
146
3
HOH
HOH
146
A
HOH
147
3
HOH
HOH
147
A
HOH
148
3
HOH
HOH
148
A
HOH
149
3
HOH
HOH
149
A
HOH
150
3
HOH
HOH
150
A
HOH
151
3
HOH
HOH
151
A
HOH
152
3
HOH
HOH
152
A
HOH
153
3
HOH
HOH
153
A
HOH
154
3
HOH
HOH
154
A
HOH
155
3
HOH
HOH
155
A
HOH
156
3
HOH
HOH
156
A
HOH
157
3
HOH
HOH
157
A
HOH
158
3
HOH
HOH
158
A
HOH
159
3
HOH
HOH
159
A
HOH
160
3
HOH
HOH
160
A
HOH
161
3
HOH
HOH
161
A
HOH
162
3
HOH
HOH
162
A
HOH
163
3
HOH
HOH
163
A
HOH
164
3
HOH
HOH
164
A
HOH
165
3
HOH
HOH
165
A
HOH
166
3
HOH
HOH
166
A
HOH
167
3
HOH
HOH
167
A
HOH
168
3
HOH
HOH
168
A
HOH
169
3
HOH
HOH
169
A
HOH
170
3
HOH
HOH
170
A
HOH
171
3
HOH
HOH
171
A
HOH
172
3
HOH
HOH
172
A
HOH
173
3
HOH
HOH
173
A
HOH
174
3
HOH
HOH
174
A
HOH
175
3
HOH
HOH
175
A
HOH
176
3
HOH
HOH
176
A
HOH
177
3
HOH
HOH
177
A
HOH
178
3
HOH
HOH
178
A
HOH
179
3
HOH
HOH
179
A
HOH
180
3
HOH
HOH
180
A
HOH
181
3
HOH
HOH
181
A
HOH
182
3
HOH
HOH
182
A
HOH
183
3
HOH
HOH
183
A
HOH
184
3
HOH
HOH
184
A
HOH
185
3
HOH
HOH
185
A
HOH
186
3
HOH
HOH
186
A
HOH
187
3
HOH
HOH
187
A
HOH
188
3
HOH
HOH
188
A
HOH
189
3
HOH
HOH
189
A
HOH
190
3
HOH
HOH
190
A
HOH
191
3
HOH
HOH
191
A
HOH
192
3
HOH
HOH
192
A
HOH
193
3
HOH
HOH
193
A
HOH
194
3
HOH
HOH
194
A
HOH
195
3
HOH
HOH
195
A
HOH
196
3
HOH
HOH
196
A
HOH
197
3
HOH
HOH
197
A
HOH
198
3
HOH
HOH
198
A
HOH
199
3
HOH
HOH
199
A
HOH
200
3
HOH
HOH
200
A
HOH
201
3
HOH
HOH
201
A
HOH
202
3
HOH
HOH
202
A
HOH
203
3
HOH
HOH
203
A
HOH
204
3
HOH
HOH
204
A
HOH
205
3
HOH
HOH
205
A
HOH
206
3
HOH
HOH
206
A
HOH
207
3
HOH
HOH
207
A
HOH
208
3
HOH
HOH
208
A
HOH
209
3
HOH
HOH
209
A
HOH
210
3
HOH
HOH
210
A
HOH
211
3
HOH
HOH
211
A
HOH
212
3
HOH
HOH
212
A
HOH
213
3
HOH
HOH
213
A
HOH
214
3
HOH
HOH
214
A
HOH
215
3
HOH
HOH
215
A
HOH
216
3
HOH
HOH
216
A
HOH
217
3
HOH
HOH
217
A
HOH
218
3
HOH
HOH
218
A
HOH
219
3
HOH
HOH
219
A
HOH
220
3
HOH
HOH
220
A
HOH
221
3
HOH
HOH
221
A
HOH
222
3
HOH
HOH
222
A
HOH
223
3
HOH
HOH
223
A
HOH
224
3
HOH
HOH
224
A
HOH
225
3
HOH
HOH
225
A
HOH
226
3
HOH
HOH
226
A
HOH
227
3
HOH
HOH
227
A
HOH
228
3
HOH
HOH
228
A
HOH
229
3
HOH
HOH
229
A
HOH
230
3
HOH
HOH
230
A
HOH
231
3
HOH
HOH
231
A
HOH
232
3
HOH
HOH
232
A
HOH
233
3
HOH
HOH
233
A
HOH
234
3
HOH
HOH
234
A
HOH
235
3
HOH
HOH
235
A
HOH
236
3
HOH
HOH
236
A
HOH
237
3
HOH
HOH
237
A
HOH
238
3
HOH
HOH
238
A
HOH
239
3
HOH
HOH
239
A
HOH
240
3
HOH
HOH
240
A
HOH
241
3
HOH
HOH
241
A
HOH
242
3
HOH
HOH
242
A
HOH
243
3
HOH
HOH
243
A
HOH
244
3
HOH
HOH
244
A
HOH
245
3
HOH
HOH
245
A
HOH
246
3
HOH
HOH
246
A
HOH
247
3
HOH
HOH
247
A
HOH
248
3
HOH
HOH
248
A
HOH
249
3
HOH
HOH
249
A
HOH
250
3
HOH
HOH
250
A
HOH
251
3
HOH
HOH
251
A
HOH
252
3
HOH
HOH
252
A
HOH
253
3
HOH
HOH
253
A
HOH
254
3
HOH
HOH
254
A
HOH
255
3
HOH
HOH
255
A
HOH
256
3
HOH
HOH
256
A
HOH
257
3
HOH
HOH
257
A
HOH
258
3
HOH
HOH
258
A
HOH
259
3
HOH
HOH
259
A
HOH
260
3
HOH
HOH
260
A
HOH
261
3
HOH
HOH
261
A
HOH
262
3
HOH
HOH
262
A
HOH
263
3
HOH
HOH
263
A
HOH
264
3
HOH
HOH
264
A
HOH
265
3
HOH
HOH
265
A
HOH
266
3
HOH
HOH
266
A
HOH
267
3
HOH
HOH
267
A
HOH
268
3
HOH
HOH
268
A
HOH
269
3
HOH
HOH
269
A
HOH
270
3
HOH
HOH
270
A
HOH
271
3
HOH
HOH
271
A
HOH
272
3
HOH
HOH
272
A
HOH
273
3
HOH
HOH
273
A
HOH
274
3
HOH
HOH
274
A
LYS
1
n
1
LYS
1
A
VAL
2
n
2
VAL
2
A
PHE
3
n
3
PHE
3
A
GLY
4
n
4
GLY
4
A
ARG
5
n
5
ARG
5
A
CYS
6
n
6
CYS
6
A
GLU
7
n
7
GLU
7
A
LEU
8
n
8
LEU
8
A
ALA
9
n
9
ALA
9
A
ALA
10
n
10
ALA
10
A
ALA
11
n
11
ALA
11
A
MET
12
n
12
MET
12
A
LYS
13
n
13
LYS
13
A
ARG
14
n
14
ARG
14
A
HIS
15
n
15
HIS
15
A
GLY
16
n
16
GLY
16
A
LEU
17
n
17
LEU
17
A
ASP
18
n
18
ASP
18
A
ASN
19
n
19
ASN
19
A
TYR
20
n
20
TYR
20
A
ARG
21
n
21
ARG
21
A
GLY
22
n
22
GLY
22
A
TYR
23
n
23
TYR
23
A
SER
24
n
24
SER
24
A
LEU
25
n
25
LEU
25
A
GLY
26
n
26
GLY
26
A
ASN
27
n
27
ASN
27
A
TRP
28
n
28
TRP
28
A
VAL
29
n
29
VAL
29
A
CYS
30
n
30
CYS
30
A
ALA
31
n
31
ALA
31
A
ALA
32
n
32
ALA
32
A
LYS
33
n
33
LYS
33
A
PHE
34
n
34
PHE
34
A
GLU
35
n
35
GLU
35
A
SER
36
n
36
SER
36
A
ASN
37
n
37
ASN
37
A
PHE
38
n
38
PHE
38
A
ASN
39
n
39
ASN
39
A
THR
40
n
40
THR
40
A
GLN
41
n
41
GLN
41
A
ALA
42
n
42
ALA
42
A
THR
43
n
43
THR
43
A
ASN
44
n
44
ASN
44
A
ARG
45
n
45
ARG
45
A
ASN
46
n
46
ASN
46
A
THR
47
n
47
THR
47
A
ASP
48
n
48
ASP
48
A
GLY
49
n
49
GLY
49
A
SER
50
n
50
SER
50
A
THR
51
n
51
THR
51
A
ASP
52
n
52
ASP
52
A
TYR
53
n
53
TYR
53
A
GLY
54
n
54
GLY
54
A
ILE
55
n
55
ILE
55
A
LEU
56
n
56
LEU
56
A
GLN
57
n
57
GLN
57
A
ILE
58
n
58
ILE
58
A
ASN
59
n
59
ASN
59
A
SER
60
n
60
SER
60
A
ARG
61
n
61
ARG
61
A
TRP
62
n
62
TRP
62
A
TRP
63
n
63
TRP
63
A
CYS
64
n
64
CYS
64
A
ASN
65
n
65
ASN
65
A
ASP
66
n
66
ASP
66
A
GLY
67
n
67
GLY
67
A
ARG
68
n
68
ARG
68
A
THR
69
n
69
THR
69
A
PRO
70
n
70
PRO
70
A
GLY
71
n
71
GLY
71
A
SER
72
n
72
SER
72
A
ARG
73
n
73
ARG
73
A
ASN
74
n
74
ASN
74
A
LEU
75
n
75
LEU
75
A
CYS
76
n
76
CYS
76
A
ASN
77
n
77
ASN
77
A
ILE
78
n
78
ILE
78
A
PRO
79
n
79
PRO
79
A
CYS
80
n
80
CYS
80
A
SER
81
n
81
SER
81
A
ALA
82
n
82
ALA
82
A
LEU
83
n
83
LEU
83
A
LEU
84
n
84
LEU
84
A
SER
85
n
85
SER
85
A
SER
86
n
86
SER
86
A
ASP
87
n
87
ASP
87
A
ILE
88
n
88
ILE
88
A
THR
89
n
89
THR
89
A
ALA
90
n
90
ALA
90
A
SER
91
n
91
SER
91
A
VAL
92
n
92
VAL
92
A
ASN
93
n
93
ASN
93
A
CYS
94
n
94
CYS
94
A
ALA
95
n
95
ALA
95
A
LYS
96
n
96
LYS
96
A
LYS
97
n
97
LYS
97
A
ILE
98
n
98
ILE
98
A
VAL
99
n
99
VAL
99
A
SER
100
n
100
SER
100
A
ASP
101
n
101
ASP
101
A
GLY
102
n
102
GLY
102
A
ASN
103
n
103
ASN
103
A
GLY
104
n
104
GLY
104
A
MET
105
n
105
MET
105
A
ASN
106
n
106
ASN
106
A
ALA
107
n
107
ALA
107
A
TRP
108
n
108
TRP
108
A
VAL
109
n
109
VAL
109
A
ALA
110
n
110
ALA
110
A
TRP
111
n
111
TRP
111
A
ARG
112
n
112
ARG
112
A
ASN
113
n
113
ASN
113
A
ARG
114
n
114
ARG
114
A
CYS
115
n
115
CYS
115
A
LYS
116
n
116
LYS
116
A
GLY
117
n
117
GLY
117
A
THR
118
n
118
THR
118
A
ASP
119
n
119
ASP
119
A
VAL
120
n
120
VAL
120
A
GLN
121
n
121
GLN
121
A
ALA
122
n
122
ALA
122
A
TRP
123
n
123
TRP
123
A
ILE
124
n
124
ILE
124
A
ARG
125
n
125
ARG
125
A
GLY
126
n
126
GLY
126
A
CYS
127
n
127
CYS
127
A
ARG
128
n
128
ARG
128
A
LEU
129
n
129
LEU
129
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
ASN
44
A
O
ASN
44
A
N
ASP
52
A
N
ASP
52
A
O
TYR
53
A
O
TYR
53
A
N
ILE
58
A
N
ILE
58
1
A
A
O
O
HOH
HOH
272
272
2.01
1_555
7_466
PROTEIN_REP.PARAM
PROTEIN.TOP
WATER_REP.PARAM
WATER.TOP
SUCROSE.PAR (HICCUP DATABASE)
SUCROSE.TOP (HICCUP DATABASE)
26.7
0.73
0.00
0.00
0.73
0.00
-1.45
0.233
0.007
0.194
0.194
1.90
30.00
1004
9972
9730
10.3
97.5
RANDOM
657242.45
0.000000
1
RESTRAINED
THROUGHOUT
0
MOLECULAR REPLACEMENT
PDB ENTRY 193L
FLAT MODEL
64.7273
0.435457
0.25
0.20
5.00
0.12
0.11
1.90
30.00
145
1169
23
0
1001
0.005
1.3
22.4
0.70
0.234
0.019
0.214
2.02
148
1413
6
9.5
96.6
18.3
1.90
30
1JJ0
9972
9892
0
0
0.062
1
14.1
98.3
1.90
1.97
973
0.213
99.9
data collection
MAR345
data scaling
SCALEPACK
phasing
AMoRE
refinement
CNS
CRYSTAL STRUCTURE OF TETRAGONAL LYSOZYME GROWN IN PRESENCE of 30% SUCROSE
1
N
N
2
N
N
3
N
N
A
GLY
4
A
GLY
4
HELX_P
A
HIS
15
A
HIS
15
1
1
12
A
SER
24
A
SER
24
HELX_P
A
ASN
37
A
ASN
37
1
2
14
A
CYS
80
A
CYS
80
HELX_P
A
SER
85
A
SER
85
5
3
6
A
ILE
88
A
ILE
88
HELX_P
A
SER
100
A
SER
100
1
4
13
A
ASN
103
A
ASN
103
HELX_P
A
ALA
107
A
ALA
107
5
5
5
A
TRP
108
A
TRP
108
HELX_P
A
CYS
115
A
CYS
115
1
6
8
A
ASP
119
A
ASP
119
HELX_P
A
ILE
124
A
ILE
124
5
7
6
disulf
2.028
A
CYS
6
A
SG
CYS
6
1_555
A
CYS
127
A
SG
CYS
127
1_555
disulf
2.036
A
CYS
30
A
SG
CYS
30
1_555
A
CYS
115
A
SG
CYS
115
1_555
disulf
2.038
A
CYS
64
A
SG
CYS
64
1_555
A
CYS
80
A
SG
CYS
80
1_555
disulf
2.035
A
CYS
76
A
SG
CYS
76
1_555
A
CYS
94
A
SG
CYS
94
1_555
covale
1.427
both
sing
B
GLC
1
B
C1
GLC
1_555
B
FRU
2
B
O2
FRU
1_555
HYDROLASE
GLYCOSIDASE, ENZYME-TETRAGONAL FORM, MUCOPEPTIDE N-ACETYLMURAMYL HYDROLASE, HEN EGG-WHITE LYSOZYME, HYDROLASE
LYSC_CHICK
UNP
1
19
P00698
KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC
SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
19
147
1JJ0
1
129
P00698
A
1
1
129
3
anti-parallel
anti-parallel
A
THR
43
A
THR
43
A
ARG
45
A
ARG
45
A
THR
51
A
THR
51
A
TYR
53
A
TYR
53
A
ILE
58
A
ILE
58
A
ASN
59
A
ASN
59
96
tetragonal
P 43 21 2