0.016388
0.000000
0.000000
0.000000
0.014445
0.000000
0.000000
0.000000
0.011303
0.00000
0.00000
0.00000
Brandstetter, H.
Grams, F.
Glitz, D.
Lang, A.
Huber, R.
Bode, W.
Krell, H.-W.
Engh, R.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.0
90.0
90.0
61.02
69.23
88.47
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C17 H21 N3 O4
331.366
2-HYDROXY-5-[4-(2-HYDROXY-ETHYL)-PIPERIDIN-1-YL]-5-PHENYL-1H-PYRIMIDINE-4,6-DIONE
non-polymer
Ca 2
40.078
CALCIUM ION
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
N
C
N
76
N
O
N
77
N
N
N
78
N
C
N
79
N
O
N
80
R
C
N
81
N
C
N
82
N
O
N
83
N
N
N
84
N
C
N
85
N
C
N
86
N
C
N
87
N
C
N
88
N
C
N
89
N
C
N
90
N
C
N
91
N
O
Y
92
N
C
Y
93
N
C
Y
94
N
C
Y
95
N
C
Y
96
N
C
Y
97
N
C
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
CA
N
120
N
N
N
121
S
C
N
122
N
C
N
123
N
O
N
124
N
C
N
125
N
C
N
126
N
C
N
127
N
O
N
128
N
N
N
129
N
O
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
N
N
141
S
C
N
142
N
C
N
143
N
O
N
144
N
C
N
145
N
C
N
146
N
C
N
147
N
O
N
148
N
O
N
149
N
O
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
N
N
160
N
C
N
161
N
C
N
162
N
O
N
163
N
O
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
S
C
N
171
N
C
N
172
N
O
N
173
N
C
Y
174
N
C
Y
175
N
N
Y
176
N
C
Y
177
N
C
Y
178
N
N
N
179
N
O
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
O
N
191
N
H
N
192
N
H
N
193
N
N
N
194
S
C
N
195
N
C
N
196
N
O
N
197
S
C
N
198
N
C
N
199
N
C
N
200
N
C
N
201
N
O
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
N
N
216
S
C
N
217
N
C
N
218
N
O
N
219
N
C
N
220
N
C
N
221
N
C
N
222
N
C
N
223
N
O
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
N
N
238
S
C
N
239
N
C
N
240
N
O
N
241
N
C
N
242
N
C
N
243
N
C
N
244
N
C
N
245
N
N
N
246
N
O
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
N
N
263
S
C
N
264
N
C
N
265
N
O
N
266
N
C
N
267
N
C
N
268
N
S
N
269
N
C
N
270
N
O
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
N
N
283
S
C
N
284
N
C
N
285
N
O
N
286
N
C
Y
287
N
C
Y
288
N
C
Y
289
N
C
Y
290
N
C
Y
291
N
C
Y
292
N
C
N
293
N
O
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
N
N
306
S
C
N
307
N
C
N
308
N
O
N
309
N
C
N
310
N
C
N
311
N
C
N
312
N
O
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
N
N
323
S
C
N
324
N
C
N
325
N
O
N
326
N
C
N
327
N
O
N
328
N
O
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
N
N
337
S
C
N
338
N
C
N
339
N
O
N
340
R
C
N
341
N
O
N
342
N
C
N
343
N
O
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
N
N
354
S
C
N
355
N
C
N
356
N
O
N
357
N
C
Y
358
N
C
Y
359
N
C
Y
360
N
C
Y
361
N
N
Y
362
N
C
Y
363
N
C
Y
364
N
C
Y
365
N
C
Y
366
N
C
N
367
N
O
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
N
N
381
S
C
N
382
N
C
N
383
N
O
N
384
N
C
Y
385
N
C
Y
386
N
C
Y
387
N
C
Y
388
N
C
Y
389
N
C
Y
390
N
C
N
391
N
O
N
392
N
O
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
N
N
405
S
C
N
406
N
C
N
407
N
O
N
408
N
C
N
409
N
C
N
410
N
C
N
411
N
O
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
ZN
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
doub
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
doub
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
doub
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
Y
106
N
doub
Y
107
N
sing
Y
108
N
sing
N
109
N
sing
Y
110
N
doub
N
111
N
sing
Y
112
N
doub
N
113
N
sing
Y
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
doub
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
doub
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
doub
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
doub
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
doub
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
doub
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
Y
174
N
sing
Y
175
N
doub
Y
176
N
doub
N
177
N
sing
Y
178
N
sing
N
179
N
sing
Y
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
doub
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
doub
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
doub
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
doub
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
doub
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
Y
282
N
doub
Y
283
N
sing
Y
284
N
sing
N
285
N
sing
Y
286
N
doub
N
287
N
sing
Y
288
N
doub
N
289
N
sing
Y
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
doub
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
doub
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
doub
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
doub
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
Y
351
N
doub
Y
352
N
sing
Y
353
N
sing
N
354
N
sing
Y
355
N
doub
Y
356
N
sing
Y
357
N
sing
N
358
N
sing
Y
359
N
sing
Y
360
N
doub
N
361
N
sing
Y
362
N
doub
N
363
N
sing
Y
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
doub
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
Y
379
N
doub
Y
380
N
sing
Y
381
N
sing
N
382
N
sing
Y
383
N
doub
N
384
N
sing
Y
385
N
doub
N
386
N
sing
Y
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
doub
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
276
17405
17412
10.1074/jbc.M007475200
11278347
The 1.8-A crystal structure of a matrix metalloproteinase 8-barbiturate inhibitor complex reveals a previously unobserved mechanism for collagenase substrate recognition.
2001
10.2210/pdb1jj9/pdb
pdb_00001jj9
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
275
1
monochromator
AREA DETECTOR
1996-06-27
XENTRONICS
graphite
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU300
18111.744
Matrix Metalloproteinase 8
3.4.24.34
catalytic domain
1
man
polymer
40.078
CALCIUM ION
2
syn
non-polymer
65.409
ZINC ION
2
syn
non-polymer
331.366
2-HYDROXY-5-[4-(2-HYDROXY-ETHYL)-PIPERIDIN-1-YL]-5-PHENYL-1H-PYRIMIDINE-4,6-DIONE
1
syn
non-polymer
18.015
water
185
nat
water
NEUTROPHIL COLLAGENASE
no
no
MLTPGNPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQGEADINIAFYQRDHGDNSPFDGPNGI
LAHAFQPGQGIGGDAHFDAEETWTNTSANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQA
IYG
MLTPGNPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQGEADINIAFYQRDHGDNSPFDGPNGI
LAHAFQPGQGIGGDAHFDAEETWTNTSANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQA
IYG
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
Escherichia coli
sample
9606
Homo sapiens
511693
Escherichia coli BL21
BL21
PLASMID
pET
1
2.58
52.29
VAPOR DIFFUSION
6.0
PEG6000, 10mM CaCl2, 100mM NaCl, Cacodylate pH6.0, VAPOR DIFFUSION, temperature 291K
291
pdbx_unobs_or_zero_occ_atoms
pdbx_unobs_or_zero_occ_residues
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_struct_conn_angle
pdbx_unobs_or_zero_occ_atoms
pdbx_unobs_or_zero_occ_residues
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Advisory
Refinement description
Advisory
Data collection
Database references
Derived calculations
1
0
2001-08-01
1
1
2008-04-27
1
2
2011-07-13
1
3
2017-10-04
1
4
2024-03-13
_software.name
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
PDBJ
2001-07-04
REL
REL
CA
CALCIUM ION
ZN
ZINC ION
BBT
2-HYDROXY-5-[4-(2-HYDROXY-ETHYL)-PIPERIDIN-1-YL]-5-PHENYL-1H-PYRIMIDINE-4,6-DIONE
HOH
water
KAL
996
2
CA
CA
996
A
KAL
997
2
CA
CA
997
A
ZNC
998
3
ZN
ZN
998
A
ZNC
999
3
ZN
ZN
999
A
BAR
1
4
BBT
BBT
1000
A
H2O
500
5
HOH
HOH
500
A
H2O
501
5
HOH
HOH
501
A
H2O
502
5
HOH
HOH
502
A
H2O
503
5
HOH
HOH
503
A
H2O
504
5
HOH
HOH
504
A
H2O
505
5
HOH
HOH
505
A
H2O
506
5
HOH
HOH
506
A
H2O
507
5
HOH
HOH
507
A
H2O
508
5
HOH
HOH
508
A
H2O
509
5
HOH
HOH
509
A
H2O
510
5
HOH
HOH
510
A
H2O
511
5
HOH
HOH
511
A
H2O
512
5
HOH
HOH
512
A
H2O
513
5
HOH
HOH
513
A
H2O
514
5
HOH
HOH
514
A
H2O
515
5
HOH
HOH
515
A
H2O
516
5
HOH
HOH
516
A
H2O
517
5
HOH
HOH
517
A
H2O
518
5
HOH
HOH
518
A
H2O
519
5
HOH
HOH
519
A
H2O
520
5
HOH
HOH
520
A
H2O
521
5
HOH
HOH
521
A
H2O
522
5
HOH
HOH
522
A
H2O
523
5
HOH
HOH
523
A
H2O
524
5
HOH
HOH
524
A
H2O
525
5
HOH
HOH
525
A
H2O
526
5
HOH
HOH
526
A
H2O
527
5
HOH
HOH
527
A
H2O
528
5
HOH
HOH
528
A
H2O
529
5
HOH
HOH
529
A
H2O
530
5
HOH
HOH
530
A
H2O
531
5
HOH
HOH
531
A
H2O
532
5
HOH
HOH
532
A
H2O
533
5
HOH
HOH
533
A
H2O
534
5
HOH
HOH
534
A
H2O
535
5
HOH
HOH
535
A
H2O
536
5
HOH
HOH
536
A
H2O
537
5
HOH
HOH
537
A
H2O
538
5
HOH
HOH
538
A
H2O
539
5
HOH
HOH
539
A
H2O
540
5
HOH
HOH
540
A
H2O
541
5
HOH
HOH
541
A
H2O
542
5
HOH
HOH
542
A
H2O
543
5
HOH
HOH
543
A
H2O
544
5
HOH
HOH
544
A
H2O
545
5
HOH
HOH
545
A
H2O
546
5
HOH
HOH
546
A
H2O
547
5
HOH
HOH
547
A
H2O
548
5
HOH
HOH
548
A
H2O
549
5
HOH
HOH
549
A
H2O
550
5
HOH
HOH
550
A
H2O
551
5
HOH
HOH
551
A
H2O
552
5
HOH
HOH
552
A
H2O
553
5
HOH
HOH
553
A
H2O
554
5
HOH
HOH
554
A
H2O
555
5
HOH
HOH
555
A
H2O
556
5
HOH
HOH
556
A
H2O
557
5
HOH
HOH
557
A
H2O
558
5
HOH
HOH
558
A
H2O
559
5
HOH
HOH
559
A
H2O
560
5
HOH
HOH
560
A
H2O
561
5
HOH
HOH
561
A
H2O
562
5
HOH
HOH
562
A
H2O
563
5
HOH
HOH
563
A
H2O
564
5
HOH
HOH
564
A
H2O
565
5
HOH
HOH
565
A
H2O
566
5
HOH
HOH
566
A
H2O
567
5
HOH
HOH
567
A
H2O
568
5
HOH
HOH
568
A
H2O
569
5
HOH
HOH
569
A
H2O
570
5
HOH
HOH
570
A
H2O
571
5
HOH
HOH
571
A
H2O
572
5
HOH
HOH
572
A
H2O
573
5
HOH
HOH
573
A
H2O
574
5
HOH
HOH
574
A
H2O
575
5
HOH
HOH
575
A
H2O
576
5
HOH
HOH
576
A
H2O
577
5
HOH
HOH
577
A
H2O
578
5
HOH
HOH
578
A
H2O
579
5
HOH
HOH
579
A
H2O
580
5
HOH
HOH
580
A
H2O
581
5
HOH
HOH
581
A
H2O
582
5
HOH
HOH
582
A
H2O
583
5
HOH
HOH
583
A
H2O
584
5
HOH
HOH
584
A
H2O
585
5
HOH
HOH
585
A
H2O
586
5
HOH
HOH
586
A
H2O
587
5
HOH
HOH
587
A
H2O
588
5
HOH
HOH
588
A
H2O
589
5
HOH
HOH
589
A
H2O
590
5
HOH
HOH
590
A
H2O
591
5
HOH
HOH
591
A
H2O
592
5
HOH
HOH
592
A
H2O
593
5
HOH
HOH
593
A
H2O
594
5
HOH
HOH
594
A
H2O
595
5
HOH
HOH
595
A
H2O
596
5
HOH
HOH
596
A
H2O
597
5
HOH
HOH
597
A
H2O
598
5
HOH
HOH
598
A
H2O
599
5
HOH
HOH
599
A
H2O
600
5
HOH
HOH
600
A
H2O
601
5
HOH
HOH
601
A
H2O
602
5
HOH
HOH
602
A
H2O
603
5
HOH
HOH
603
A
H2O
604
5
HOH
HOH
604
A
H2O
605
5
HOH
HOH
605
A
H2O
606
5
HOH
HOH
606
A
H2O
607
5
HOH
HOH
607
A
H2O
608
5
HOH
HOH
608
A
H2O
609
5
HOH
HOH
609
A
H2O
610
5
HOH
HOH
610
A
H2O
611
5
HOH
HOH
611
A
H2O
612
5
HOH
HOH
612
A
H2O
613
5
HOH
HOH
613
A
H2O
614
5
HOH
HOH
614
A
H2O
615
5
HOH
HOH
615
A
H2O
616
5
HOH
HOH
616
A
H2O
617
5
HOH
HOH
617
A
H2O
618
5
HOH
HOH
618
A
H2O
619
5
HOH
HOH
619
A
H2O
620
5
HOH
HOH
620
A
H2O
621
5
HOH
HOH
621
A
H2O
622
5
HOH
HOH
622
A
H2O
623
5
HOH
HOH
623
A
H2O
624
5
HOH
HOH
624
A
H2O
625
5
HOH
HOH
625
A
H2O
626
5
HOH
HOH
626
A
H2O
627
5
HOH
HOH
627
A
H2O
628
5
HOH
HOH
628
A
H2O
629
5
HOH
HOH
629
A
H2O
630
5
HOH
HOH
630
A
H2O
631
5
HOH
HOH
631
A
H2O
632
5
HOH
HOH
632
A
H2O
633
5
HOH
HOH
633
A
H2O
634
5
HOH
HOH
634
A
H2O
635
5
HOH
HOH
635
A
H2O
636
5
HOH
HOH
636
A
H2O
637
5
HOH
HOH
637
A
H2O
638
5
HOH
HOH
638
A
H2O
639
5
HOH
HOH
639
A
H2O
640
5
HOH
HOH
640
A
H2O
641
5
HOH
HOH
641
A
H2O
642
5
HOH
HOH
642
A
H2O
643
5
HOH
HOH
643
A
H2O
644
5
HOH
HOH
644
A
H2O
645
5
HOH
HOH
645
A
H2O
646
5
HOH
HOH
646
A
H2O
647
5
HOH
HOH
647
A
H2O
648
5
HOH
HOH
648
A
H2O
649
5
HOH
HOH
649
A
H2O
650
5
HOH
HOH
650
A
H2O
651
5
HOH
HOH
651
A
H2O
652
5
HOH
HOH
652
A
H2O
653
5
HOH
HOH
653
A
H2O
654
5
HOH
HOH
654
A
H2O
655
5
HOH
HOH
655
A
H2O
656
5
HOH
HOH
656
A
H2O
657
5
HOH
HOH
657
A
H2O
658
5
HOH
HOH
658
A
H2O
659
5
HOH
HOH
659
A
H2O
660
5
HOH
HOH
660
A
H2O
661
5
HOH
HOH
661
A
H2O
662
5
HOH
HOH
662
A
H2O
663
5
HOH
HOH
663
A
H2O
664
5
HOH
HOH
664
A
H2O
665
5
HOH
HOH
665
A
H2O
666
5
HOH
HOH
666
A
H2O
667
5
HOH
HOH
667
A
H2O
668
5
HOH
HOH
668
A
H2O
669
5
HOH
HOH
669
A
H2O
670
5
HOH
HOH
670
A
H2O
671
5
HOH
HOH
671
A
H2O
672
5
HOH
HOH
672
A
H2O
673
5
HOH
HOH
673
A
H2O
674
5
HOH
HOH
674
A
H2O
675
5
HOH
HOH
675
A
H2O
676
5
HOH
HOH
676
A
H2O
677
5
HOH
HOH
677
A
H2O
678
5
HOH
HOH
678
A
H2O
679
5
HOH
HOH
679
A
H2O
680
5
HOH
HOH
680
A
H2O
681
5
HOH
HOH
681
A
H2O
682
5
HOH
HOH
682
A
H2O
683
5
HOH
HOH
683
A
H2O
684
5
HOH
HOH
684
A
n
1
80
A
n
2
81
A
n
3
82
A
n
4
83
A
n
5
84
A
ASN
85
n
6
ASN
85
A
PRO
86
n
7
PRO
86
A
LYS
87
n
8
LYS
87
A
TRP
88
n
9
TRP
88
A
GLU
89
n
10
GLU
89
A
ARG
90
n
11
ARG
90
A
THR
91
n
12
THR
91
A
ASN
92
n
13
ASN
92
A
LEU
93
n
14
LEU
93
A
THR
94
n
15
THR
94
A
TYR
95
n
16
TYR
95
A
ARG
96
n
17
ARG
96
A
ILE
97
n
18
ILE
97
A
ARG
98
n
19
ARG
98
A
ASN
99
n
20
ASN
99
A
TYR
100
n
21
TYR
100
A
THR
101
n
22
THR
101
A
PRO
102
n
23
PRO
102
A
GLN
103
n
24
GLN
103
A
LEU
104
n
25
LEU
104
A
SER
105
n
26
SER
105
A
GLU
106
n
27
GLU
106
A
ALA
107
n
28
ALA
107
A
GLU
108
n
29
GLU
108
A
VAL
109
n
30
VAL
109
A
GLU
110
n
31
GLU
110
A
ARG
111
n
32
ARG
111
A
ALA
112
n
33
ALA
112
A
ILE
113
n
34
ILE
113
A
LYS
114
n
35
LYS
114
A
ASP
115
n
36
ASP
115
A
ALA
116
n
37
ALA
116
A
PHE
117
n
38
PHE
117
A
GLU
118
n
39
GLU
118
A
LEU
119
n
40
LEU
119
A
TRP
120
n
41
TRP
120
A
SER
121
n
42
SER
121
A
VAL
122
n
43
VAL
122
A
ALA
123
n
44
ALA
123
A
SER
124
n
45
SER
124
A
PRO
125
n
46
PRO
125
A
LEU
126
n
47
LEU
126
A
ILE
127
n
48
ILE
127
A
PHE
128
n
49
PHE
128
A
THR
129
n
50
THR
129
A
ARG
130
n
51
ARG
130
A
ILE
131
n
52
ILE
131
A
SER
132
n
53
SER
132
A
GLN
133
n
54
GLN
133
A
GLY
134
n
55
GLY
134
A
GLU
135
n
56
GLU
135
A
ALA
136
n
57
ALA
136
A
ASP
137
n
58
ASP
137
A
ILE
138
n
59
ILE
138
A
ASN
139
n
60
ASN
139
A
ILE
140
n
61
ILE
140
A
ALA
141
n
62
ALA
141
A
PHE
142
n
63
PHE
142
A
TYR
143
n
64
TYR
143
A
GLN
144
n
65
GLN
144
A
ARG
145
n
66
ARG
145
A
ASP
146
n
67
ASP
146
A
HIS
147
n
68
HIS
147
A
GLY
148
n
69
GLY
148
A
ASP
149
n
70
ASP
149
A
ASN
150
n
71
ASN
150
A
SER
151
n
72
SER
151
A
PRO
152
n
73
PRO
152
A
PHE
153
n
74
PHE
153
A
ASP
154
n
75
ASP
154
A
GLY
155
n
76
GLY
155
A
PRO
156
n
77
PRO
156
A
ASN
157
n
78
ASN
157
A
GLY
158
n
79
GLY
158
A
ILE
159
n
80
ILE
159
A
LEU
160
n
81
LEU
160
A
ALA
161
n
82
ALA
161
A
HIS
162
n
83
HIS
162
A
ALA
163
n
84
ALA
163
A
PHE
164
n
85
PHE
164
A
GLN
165
n
86
GLN
165
A
PRO
166
n
87
PRO
166
A
GLY
167
n
88
GLY
167
A
GLN
168
n
89
GLN
168
A
GLY
169
n
90
GLY
169
A
ILE
170
n
91
ILE
170
A
GLY
171
n
92
GLY
171
A
GLY
172
n
93
GLY
172
A
ASP
173
n
94
ASP
173
A
ALA
174
n
95
ALA
174
A
HIS
175
n
96
HIS
175
A
PHE
176
n
97
PHE
176
A
ASP
177
n
98
ASP
177
A
ALA
178
n
99
ALA
178
A
GLU
179
n
100
GLU
179
A
GLU
180
n
101
GLU
180
A
THR
181
n
102
THR
181
A
TRP
182
n
103
TRP
182
A
THR
183
n
104
THR
183
A
ASN
184
n
105
ASN
184
A
THR
185
n
106
THR
185
A
SER
186
n
107
SER
186
A
ALA
187
n
108
ALA
187
A
ASN
188
n
109
ASN
188
A
TYR
189
n
110
TYR
189
A
ASN
190
n
111
ASN
190
A
LEU
191
n
112
LEU
191
A
PHE
192
n
113
PHE
192
A
LEU
193
n
114
LEU
193
A
VAL
194
n
115
VAL
194
A
ALA
195
n
116
ALA
195
A
ALA
196
n
117
ALA
196
A
HIS
197
n
118
HIS
197
A
GLU
198
n
119
GLU
198
A
PHE
199
n
120
PHE
199
A
GLY
200
n
121
GLY
200
A
HIS
201
n
122
HIS
201
A
SER
202
n
123
SER
202
A
LEU
203
n
124
LEU
203
A
GLY
204
n
125
GLY
204
A
LEU
205
n
126
LEU
205
A
ALA
206
n
127
ALA
206
A
HIS
207
n
128
HIS
207
A
SER
208
n
129
SER
208
A
SER
209
n
130
SER
209
A
ASP
210
n
131
ASP
210
A
PRO
211
n
132
PRO
211
A
GLY
212
n
133
GLY
212
A
ALA
213
n
134
ALA
213
A
LEU
214
n
135
LEU
214
A
MET
215
n
136
MET
215
A
TYR
216
n
137
TYR
216
A
PRO
217
n
138
PRO
217
A
ASN
218
n
139
ASN
218
A
TYR
219
n
140
TYR
219
A
ALA
220
n
141
ALA
220
A
PHE
221
n
142
PHE
221
A
ARG
222
n
143
ARG
222
A
GLU
223
n
144
GLU
223
A
THR
224
n
145
THR
224
A
SER
225
n
146
SER
225
A
ASN
226
n
147
ASN
226
A
TYR
227
n
148
TYR
227
A
SER
228
n
149
SER
228
A
LEU
229
n
150
LEU
229
A
PRO
230
n
151
PRO
230
A
GLN
231
n
152
GLN
231
A
ASP
232
n
153
ASP
232
A
ASP
233
n
154
ASP
233
A
ILE
234
n
155
ILE
234
A
ASP
235
n
156
ASP
235
A
GLY
236
n
157
GLY
236
A
ILE
237
n
158
ILE
237
A
GLN
238
n
159
GLN
238
A
ALA
239
n
160
ALA
239
A
ILE
240
n
161
ILE
240
A
TYR
241
n
162
TYR
241
A
GLY
242
n
163
GLY
242
A
author_defined_assembly
1
monomeric
A
ASP
137
A
O
ASP
58
1_555
A
CA
996
B
CA
CA
1_555
A
GLY
169
A
O
GLY
90
1_555
166.1
A
ASP
137
A
O
ASP
58
1_555
A
CA
996
B
CA
CA
1_555
A
GLY
171
A
O
GLY
92
1_555
99.1
A
GLY
169
A
O
GLY
90
1_555
A
CA
996
B
CA
CA
1_555
A
GLY
171
A
O
GLY
92
1_555
92.9
A
ASP
137
A
O
ASP
58
1_555
A
CA
996
B
CA
CA
1_555
A
ASP
173
A
OD2
ASP
94
1_555
89.0
A
GLY
169
A
O
GLY
90
1_555
A
CA
996
B
CA
CA
1_555
A
ASP
173
A
OD2
ASP
94
1_555
99.0
A
GLY
171
A
O
GLY
92
1_555
A
CA
996
B
CA
CA
1_555
A
ASP
173
A
OD2
ASP
94
1_555
85.5
A
ASP
137
A
O
ASP
58
1_555
A
CA
996
B
CA
CA
1_555
A
HOH
511
G
O
HOH
1_555
79.0
A
GLY
169
A
O
GLY
90
1_555
A
CA
996
B
CA
CA
1_555
A
HOH
511
G
O
HOH
1_555
87.3
A
GLY
171
A
O
GLY
92
1_555
A
CA
996
B
CA
CA
1_555
A
HOH
511
G
O
HOH
1_555
159.2
A
ASP
173
A
OD2
ASP
94
1_555
A
CA
996
B
CA
CA
1_555
A
HOH
511
G
O
HOH
1_555
115.1
A
HIS
147
A
NE2
HIS
68
1_555
A
ZN
998
D
ZN
ZN
1_555
A
ASP
149
A
OD2
ASP
70
1_555
109.5
A
HIS
147
A
NE2
HIS
68
1_555
A
ZN
998
D
ZN
ZN
1_555
A
HIS
162
A
NE2
HIS
83
1_555
108.6
A
ASP
149
A
OD2
ASP
70
1_555
A
ZN
998
D
ZN
ZN
1_555
A
HIS
162
A
NE2
HIS
83
1_555
111.2
A
HIS
147
A
NE2
HIS
68
1_555
A
ZN
998
D
ZN
ZN
1_555
A
HIS
175
A
ND1
HIS
96
1_555
110.9
A
ASP
149
A
OD2
ASP
70
1_555
A
ZN
998
D
ZN
ZN
1_555
A
HIS
175
A
ND1
HIS
96
1_555
99.6
A
HIS
162
A
NE2
HIS
83
1_555
A
ZN
998
D
ZN
ZN
1_555
A
HIS
175
A
ND1
HIS
96
1_555
116.6
A
ASP
154
A
OD2
ASP
75
1_555
A
CA
997
C
CA
CA
1_555
A
GLY
155
A
O
GLY
76
1_555
88.9
A
ASP
154
A
OD2
ASP
75
1_555
A
CA
997
C
CA
CA
1_555
A
ASN
157
A
O
ASN
78
1_555
90.0
A
GLY
155
A
O
GLY
76
1_555
A
CA
997
C
CA
CA
1_555
A
ASN
157
A
O
ASN
78
1_555
92.8
A
ASP
154
A
OD2
ASP
75
1_555
A
CA
997
C
CA
CA
1_555
A
ILE
159
A
O
ILE
80
1_555
88.2
A
GLY
155
A
O
GLY
76
1_555
A
CA
997
C
CA
CA
1_555
A
ILE
159
A
O
ILE
80
1_555
176.0
A
ASN
157
A
O
ASN
78
1_555
A
CA
997
C
CA
CA
1_555
A
ILE
159
A
O
ILE
80
1_555
89.9
A
ASP
154
A
OD2
ASP
75
1_555
A
CA
997
C
CA
CA
1_555
A
ASP
177
A
OD1
ASP
98
1_555
90.5
A
GLY
155
A
O
GLY
76
1_555
A
CA
997
C
CA
CA
1_555
A
ASP
177
A
OD1
ASP
98
1_555
79.4
A
ASN
157
A
O
ASN
78
1_555
A
CA
997
C
CA
CA
1_555
A
ASP
177
A
OD1
ASP
98
1_555
172.2
A
ILE
159
A
O
ILE
80
1_555
A
CA
997
C
CA
CA
1_555
A
ASP
177
A
OD1
ASP
98
1_555
98.0
A
ASP
154
A
OD2
ASP
75
1_555
A
CA
997
C
CA
CA
1_555
A
GLU
180
A
OE1
GLU
101
1_555
176.7
A
GLY
155
A
O
GLY
76
1_555
A
CA
997
C
CA
CA
1_555
A
GLU
180
A
OE1
GLU
101
1_555
94.4
A
ASN
157
A
O
ASN
78
1_555
A
CA
997
C
CA
CA
1_555
A
GLU
180
A
OE1
GLU
101
1_555
89.3
A
ILE
159
A
O
ILE
80
1_555
A
CA
997
C
CA
CA
1_555
A
GLU
180
A
OE1
GLU
101
1_555
88.6
A
ASP
177
A
OD1
ASP
98
1_555
A
CA
997
C
CA
CA
1_555
A
GLU
180
A
OE1
GLU
101
1_555
90.6
A
HIS
197
A
NE2
HIS
118
1_555
A
ZN
999
E
ZN
ZN
1_555
A
HIS
201
A
NE2
HIS
122
1_555
100.3
A
HIS
197
A
NE2
HIS
118
1_555
A
ZN
999
E
ZN
ZN
1_555
A
HIS
207
A
NE2
HIS
128
1_555
119.7
A
HIS
201
A
NE2
HIS
122
1_555
A
ZN
999
E
ZN
ZN
1_555
A
HIS
207
A
NE2
HIS
128
1_555
102.4
A
HIS
197
A
NE2
HIS
118
1_555
A
ZN
999
E
ZN
ZN
1_555
A
BBT
1000
F
N1
BBT
1_555
95.5
A
HIS
201
A
NE2
HIS
122
1_555
A
ZN
999
E
ZN
ZN
1_555
A
BBT
1000
F
N1
BBT
1_555
125.6
A
HIS
207
A
NE2
HIS
128
1_555
A
ZN
999
E
ZN
ZN
1_555
A
BBT
1000
F
N1
BBT
1_555
113.8
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
ILE
127
A
O
ILE
48
A
N
LEU
93
A
N
LEU
14
A
O
THR
94
A
O
THR
15
A
N
ILE
138
A
N
ILE
59
A
O
ASN
139
A
O
ASN
60
A
N
ALA
174
A
N
ALA
95
A
N
HIS
175
A
N
HIS
96
A
O
HIS
162
A
O
HIS
83
1
A
CG
GLN
168
A
CG
GLN
89
0
Y
1
A
CD
GLN
168
A
CD
GLN
89
0
Y
1
A
OE1
GLN
168
A
OE1
GLN
89
0
Y
1
A
NE2
GLN
168
A
NE2
GLN
89
0
Y
1
A
MET
80
A
MET
1
1
Y
1
A
LEU
81
A
LEU
2
1
Y
1
A
THR
82
A
THR
3
1
Y
1
A
PRO
83
A
PRO
4
1
Y
1
A
GLY
84
A
GLY
5
1
Y
1
A
ASN
85
A
ASN
6
0
Y
1
A
ASN
226
A
ASN
147
0
Y
1
A
ARG
145
27.57
-123.84
1
A
HIS
147
-141.15
33.58
1
A
ASN
150
73.68
-4.78
1
A
ASN
157
63.83
-159.34
1
A
PRO
217
-66.65
51.49
0.2960000
0.2110000
2.0
8.0
521
11862
10862
4.8
random
1
2
MOLECULAR REPLACEMENT
Engh & Huber
2.0
8.0
185
1462
28
0
1249
0.011
1.6
0.2960000
0.2110000
8.0
521
11713
1.8
20.0
1JJ9
16907
14371
2
3
1
85
1.8
20.0
1
85.0
phasing
AMoRE
refinement
X-PLOR
3.1
data reduction
X-GEN
data scaling
CCP4
(TRUNCATE)
Crystal Structure of MMP8-Barbiturate Complex Reveals Mechanism for Collagen Substrate Recognition
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
4
N
N
5
N
N
A
SER
105
A
SER
26
HELX_P
A
VAL
122
A
VAL
43
1
1
18
A
ASN
190
A
ASN
111
HELX_P
A
GLY
204
A
GLY
125
1
2
15
A
PRO
230
A
PRO
151
HELX_P
A
GLY
242
A
GLY
163
1
3
13
metalc
2.341
A
ASP
137
A
O
ASP
58
1_555
A
CA
996
B
CA
CA
1_555
metalc
2.056
A
HIS
147
A
NE2
HIS
68
1_555
A
ZN
998
D
ZN
ZN
1_555
metalc
1.967
A
ASP
149
A
OD2
ASP
70
1_555
A
ZN
998
D
ZN
ZN
1_555
metalc
2.285
A
ASP
154
A
OD2
ASP
75
1_555
A
CA
997
C
CA
CA
1_555
metalc
2.167
A
GLY
155
A
O
GLY
76
1_555
A
CA
997
C
CA
CA
1_555
metalc
2.118
A
ASN
157
A
O
ASN
78
1_555
A
CA
997
C
CA
CA
1_555
metalc
2.309
A
ILE
159
A
O
ILE
80
1_555
A
CA
997
C
CA
CA
1_555
metalc
2.032
A
HIS
162
A
NE2
HIS
83
1_555
A
ZN
998
D
ZN
ZN
1_555
metalc
2.206
A
GLY
169
A
O
GLY
90
1_555
A
CA
996
B
CA
CA
1_555
metalc
2.233
A
GLY
171
A
O
GLY
92
1_555
A
CA
996
B
CA
CA
1_555
metalc
2.370
A
ASP
173
A
OD2
ASP
94
1_555
A
CA
996
B
CA
CA
1_555
metalc
1.952
A
HIS
175
A
ND1
HIS
96
1_555
A
ZN
998
D
ZN
ZN
1_555
metalc
2.476
A
ASP
177
A
OD1
ASP
98
1_555
A
CA
997
C
CA
CA
1_555
metalc
2.103
A
GLU
180
A
OE1
GLU
101
1_555
A
CA
997
C
CA
CA
1_555
metalc
2.026
A
HIS
197
A
NE2
HIS
118
1_555
A
ZN
999
E
ZN
ZN
1_555
metalc
1.953
A
HIS
201
A
NE2
HIS
122
1_555
A
ZN
999
E
ZN
ZN
1_555
metalc
1.996
A
HIS
207
A
NE2
HIS
128
1_555
A
ZN
999
E
ZN
ZN
1_555
metalc
1.624
A
HOH
511
G
O
HOH
1_555
A
CA
996
B
CA
CA
1_555
metalc
2.090
A
ZN
999
E
ZN
ZN
1_555
A
BBT
1000
F
N1
BBT
1_555
HYDROLASE
MMP-8, substrate recognition, cis-peptide bond, conformational transition, HYDROLASE
A
ASN
188
A
ASN
109
1
A
TYR
189
A
TYR
110
0.02
MMP8_HUMAN
UNP
1
100
P22894
MLTPGNPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQGEADINIAFYQRDHGDNSPFDGPNGI
LAHAFQPGQGIGGDAHFDAEETWTNTSANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQA
IYG
100
262
1JJ9
80
242
P22894
A
1
1
163
5
parallel
parallel
parallel
anti-parallel
A
ILE
127
A
ILE
48
A
ARG
130
A
ARG
51
A
ASN
92
A
ASN
13
A
ILE
97
A
ILE
18
A
ILE
138
A
ILE
59
A
TYR
143
A
TYR
64
A
ALA
174
A
ALA
95
A
ASP
177
A
ASP
98
A
ALA
161
A
ALA
82
A
ALA
163
A
ALA
84
BINDING SITE FOR RESIDUE CA A 996
A
CA
996
Software
5
BINDING SITE FOR RESIDUE CA A 997
A
CA
997
Software
6
BINDING SITE FOR RESIDUE ZN A 998
A
ZN
998
Software
4
BINDING SITE FOR RESIDUE ZN A 999
A
ZN
999
Software
4
BINDING SITE FOR RESIDUE BBT A 1000
A
BBT
1000
Software
10
A
ASP
137
A
ASP
58
5
1_555
A
GLY
169
A
GLY
90
5
1_555
A
GLY
171
A
GLY
92
5
1_555
A
ASP
173
A
ASP
94
5
1_555
A
HOH
511
G
HOH
5
1_555
A
ASP
154
A
ASP
75
6
1_555
A
GLY
155
A
GLY
76
6
1_555
A
ASN
157
A
ASN
78
6
1_555
A
ILE
159
A
ILE
80
6
1_555
A
ASP
177
A
ASP
98
6
1_555
A
GLU
180
A
GLU
101
6
1_555
A
HIS
147
A
HIS
68
4
1_555
A
ASP
149
A
ASP
70
4
1_555
A
HIS
162
A
HIS
83
4
1_555
A
HIS
175
A
HIS
96
4
1_555
A
HIS
197
A
HIS
118
4
1_555
A
HIS
201
A
HIS
122
4
1_555
A
HIS
207
A
HIS
128
4
1_555
A
BBT
1000
F
BBT
4
1_555
A
LEU
160
A
LEU
81
10
1_555
A
ALA
161
A
ALA
82
10
1_555
A
HIS
197
A
HIS
118
10
1_555
A
GLU
198
A
GLU
119
10
1_555
A
HIS
201
A
HIS
122
10
1_555
A
HIS
207
A
HIS
128
10
1_555
A
PRO
217
A
PRO
138
10
1_555
A
ASN
218
A
ASN
139
10
1_555
A
HOH
558
G
HOH
10
1_555
A
ZN
999
E
ZN
10
1_555
23
I 2 2 2