1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Mosbah, A.
Coulon, A.
Bernard, C.
Urech, K.
Rouge, P.
Darbon, H.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
TO BE PUBLISHED
0353
Solution Structure of the Viscotoxin A2
10.2210/pdb1jmn/pdb
pdb_00001jmn
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
1
1.0
4839.519
viscotoxin A2
1
man
polymer
no
no
KSCCPNTTGRNIYNTCRFGGGSRQVCASLSGCKIISASTCPSDYPK
KSCCPNTTGRNIYNTCRFGGGSRQVCASLSGCKIISASTCPSDYPK
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
European mistletoe
Viscum
Escherichia
sample
3972
Viscum album
562
Escherichia coli
database_2
pdbx_struct_assembly
pdbx_struct_oper_list
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
1
0
2003-06-24
1
1
2008-04-27
1
2
2011-07-13
1
3
2022-02-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
RCSB
Y
RCSB
2001-07-19
REL
REL
back calculated data agree with experimental NOESY spectrum, structures with acceptable covalent geometry, structures with favorable non-bond energy
40
20
2D NOESY
2D TOCSY
5
300
K
1
fewest violations,lowest energy
BRUNGER
refinement
CNS
1.0
500
Bruker
DRX
LYS
1
n
1
LYS
1
A
SER
2
n
2
SER
2
A
CYS
3
n
3
CYS
3
A
CYS
4
n
4
CYS
4
A
PRO
5
n
5
PRO
5
A
ASN
6
n
6
ASN
6
A
THR
7
n
7
THR
7
A
THR
8
n
8
THR
8
A
GLY
9
n
9
GLY
9
A
ARG
10
n
10
ARG
10
A
ASN
11
n
11
ASN
11
A
ILE
12
n
12
ILE
12
A
TYR
13
n
13
TYR
13
A
ASN
14
n
14
ASN
14
A
THR
15
n
15
THR
15
A
CYS
16
n
16
CYS
16
A
ARG
17
n
17
ARG
17
A
PHE
18
n
18
PHE
18
A
GLY
19
n
19
GLY
19
A
GLY
20
n
20
GLY
20
A
GLY
21
n
21
GLY
21
A
SER
22
n
22
SER
22
A
ARG
23
n
23
ARG
23
A
GLN
24
n
24
GLN
24
A
VAL
25
n
25
VAL
25
A
CYS
26
n
26
CYS
26
A
ALA
27
n
27
ALA
27
A
SER
28
n
28
SER
28
A
LEU
29
n
29
LEU
29
A
SER
30
n
30
SER
30
A
GLY
31
n
31
GLY
31
A
CYS
32
n
32
CYS
32
A
LYS
33
n
33
LYS
33
A
ILE
34
n
34
ILE
34
A
ILE
35
n
35
ILE
35
A
SER
36
n
36
SER
36
A
ALA
37
n
37
ALA
37
A
SER
38
n
38
SER
38
A
THR
39
n
39
THR
39
A
CYS
40
n
40
CYS
40
A
PRO
41
n
41
PRO
41
A
SER
42
n
42
SER
42
A
ASP
43
n
43
ASP
43
A
TYR
44
n
44
TYR
44
A
PRO
45
n
45
PRO
45
A
LYS
46
n
46
LYS
46
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
CYS
3
A
N
CYS
3
A
O
LYS
33
A
O
LYS
33
3
A
A
CE2
CD2
TYR
TYR
13
13
-0.097
0.015
1.389
1.292
N
4
A
A
CE2
CD2
TYR
TYR
13
13
-0.093
0.015
1.389
1.296
N
5
A
A
CE2
CD2
TYR
TYR
13
13
-0.120
0.015
1.389
1.269
N
8
A
A
CG
CD1
TYR
TYR
13
13
-0.081
0.013
1.387
1.306
N
14
A
A
CG
CD1
TYR
TYR
13
13
-0.081
0.013
1.387
1.306
N
14
A
A
CE1
CZ
TYR
TYR
13
13
-0.086
0.013
1.381
1.295
N
18
A
A
CE2
CD2
TYR
TYR
13
13
-0.099
0.015
1.389
1.290
N
1
A
SER
22
-138.37
-148.74
1
A
SER
36
-97.07
32.96
1
A
ALA
37
-166.93
-167.69
1
A
PRO
41
-72.47
-165.65
1
A
SER
42
-83.15
45.91
1
A
TYR
44
48.03
87.56
2
A
SER
22
-62.95
-148.83
2
A
ALA
37
-178.87
-156.09
2
A
CYS
40
51.40
108.30
2
A
PRO
41
-56.59
-157.95
2
A
SER
42
-80.12
42.36
2
A
ASP
43
-106.32
44.59
2
A
TYR
44
47.60
88.98
3
A
SER
22
-139.68
-149.31
3
A
SER
36
-97.20
33.85
3
A
PRO
41
-73.88
-164.80
3
A
SER
42
-79.56
42.23
3
A
TYR
44
48.57
88.00
4
A
SER
22
-62.62
-149.02
4
A
ALA
37
179.46
-171.27
4
A
PRO
41
-62.25
-162.06
4
A
SER
42
-79.52
42.61
4
A
TYR
44
46.00
88.18
5
A
PRO
5
-41.39
-72.99
5
A
SER
22
-176.13
-128.90
5
A
SER
36
-96.44
33.33
5
A
PRO
41
-68.97
-161.54
5
A
SER
42
-81.97
44.13
5
A
ASP
43
-109.92
47.48
5
A
TYR
44
46.41
77.26
6
A
SER
22
-132.87
-146.80
6
A
SER
36
-97.78
33.45
6
A
ALA
37
-178.49
-170.46
6
A
SER
42
39.14
15.64
6
A
ASP
43
-97.51
37.35
6
A
TYR
44
46.98
82.87
7
A
ASN
6
-177.43
-175.87
7
A
SER
22
-63.24
-148.36
7
A
SER
36
-97.73
33.22
7
A
PRO
41
-68.06
-163.47
7
A
SER
42
-81.98
45.11
7
A
TYR
44
47.70
82.85
8
A
SER
22
-62.98
-148.97
8
A
ALA
37
-177.75
-164.59
8
A
PRO
41
-71.19
-167.02
8
A
SER
42
-83.04
45.41
8
A
TYR
44
49.25
94.44
9
A
SER
2
-175.54
121.08
9
A
CYS
3
-62.59
86.71
9
A
SER
22
-63.27
-148.36
9
A
SER
36
-98.69
34.56
9
A
CYS
40
-170.82
136.10
9
A
PRO
41
-56.90
-160.77
9
A
SER
42
-82.10
45.03
9
A
ASP
43
-106.00
43.24
9
A
TYR
44
48.19
74.74
10
A
SER
22
-136.98
-148.90
10
A
ALA
37
-177.47
-164.55
10
A
PRO
41
-74.05
-163.20
10
A
SER
42
-80.42
43.50
10
A
TYR
44
49.49
90.04
11
A
SER
22
-139.00
-147.64
11
A
ALA
37
-176.49
-163.91
11
A
THR
39
-138.50
-123.40
11
A
CYS
40
-175.96
116.82
11
A
PRO
41
-49.64
-177.11
11
A
SER
42
-82.83
46.65
11
A
TYR
44
52.30
91.67
12
A
SER
22
-63.09
-149.27
12
A
PRO
41
-65.01
-162.00
12
A
SER
42
-81.30
44.26
12
A
TYR
44
46.92
83.76
13
A
SER
22
-136.94
-146.20
13
A
ALA
37
-172.40
-173.68
13
A
PRO
41
-73.89
-162.87
13
A
SER
42
-82.27
45.14
13
A
ASP
43
-119.03
51.94
13
A
TYR
44
48.57
86.57
14
A
SER
22
-176.99
-129.71
14
A
ARG
23
-107.79
-60.79
14
A
ALA
37
-176.61
-163.10
14
A
PRO
41
-66.52
-171.71
14
A
SER
42
-82.98
45.05
14
A
TYR
44
51.21
98.75
15
A
PRO
5
-42.12
-71.60
15
A
SER
22
-62.38
-148.72
15
A
ALA
37
178.83
-169.21
15
A
PRO
41
-72.86
-162.07
15
A
SER
42
-81.41
44.21
15
A
TYR
44
43.61
84.34
16
A
SER
22
-140.24
-145.57
16
A
SER
36
-97.60
33.52
16
A
PRO
41
-62.10
-161.94
16
A
SER
42
-82.06
45.78
16
A
TYR
44
46.11
84.46
17
A
SER
22
-133.87
-146.09
17
A
ALA
37
-177.60
-164.24
17
A
PRO
41
-72.56
-164.67
17
A
SER
42
-82.49
44.65
17
A
ASP
43
-117.28
50.13
17
A
TYR
44
45.37
88.52
18
A
SER
22
-62.66
-148.61
18
A
ALA
37
-178.11
-163.96
18
A
PRO
41
-67.00
-164.99
18
A
SER
42
-82.40
44.48
18
A
ASP
43
-114.98
50.19
18
A
TYR
44
44.75
85.27
18
A
PRO
45
-69.47
75.32
19
A
SER
22
-63.09
-149.46
19
A
ALA
37
-177.23
-163.95
19
A
PRO
41
-72.96
-163.71
19
A
SER
42
-80.41
43.83
19
A
TYR
44
49.14
94.24
20
A
SER
22
-138.33
-148.81
20
A
ALA
37
-176.92
-167.16
20
A
PRO
41
-68.78
-162.73
20
A
SER
42
-81.51
43.51
20
A
TYR
44
46.47
83.68
Solution Structure of the Viscotoxin A2
1
N
N
A
ASN
6
A
ASN
6
HELX_P
A
PHE
18
A
PHE
18
1
1
13
A
ARG
23
A
ARG
23
HELX_P
A
GLY
31
A
GLY
31
1
2
9
disulf
2.032
A
CYS
3
A
SG
CYS
3
1_555
A
CYS
40
A
SG
CYS
40
1_555
disulf
1.954
A
CYS
4
A
SG
CYS
4
1_555
A
CYS
32
A
SG
CYS
32
1_555
disulf
2.023
A
CYS
16
A
SG
CYS
16
1_555
A
CYS
26
A
SG
CYS
26
1_555
TOXIN
thionin, viscotoxin, Viscum album, TOXIN
THN2_VISAL
UNP
1
1
P32880
KSCCPNTTGRNIYNTCRFGGGSREVCASLSGCKIISASTCPSYPDK
1
46
1JMN
1
46
P32880
A
1
1
46
1
GLU
SEE REMARK 999
GLN
24
1JMN
A
P32880
UNP
24
24
1
TYR
SEE REMARK 999
ASP
43
1JMN
A
P32880
UNP
43
43
1
PRO
SEE REMARK 999
TYR
44
1JMN
A
P32880
UNP
44
44
1
ASP
SEE REMARK 999
PRO
45
1JMN
A
P32880
UNP
45
45
2
anti-parallel
A
SER
2
A
SER
2
A
CYS
3
A
CYS
3
A
LYS
33
A
LYS
33
A
ILE
34
A
ILE
34