0.006566 0.003791 -0.000000 0.000000 0.007581 -0.000000 0.000000 0.000000 0.007886 0.00000 0.00000 0.00000 Baglin, T.P. Carrell, R.W. Esmon, C.T. Huntington, J.A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 152.310 152.310 126.800 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C6 H14 O2 118.174 (4S)-2-METHYL-2,4-PENTANEDIOL non-polymer Na 1 22.990 SODIUM ION non-polymer C8 H15 N O6 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE D-saccharide, beta linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C9 H11 N O6 S 261.252 n O-SULFO-L-TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N C N 251 N C N 252 N O N 253 N C N 254 N C N 255 S C N 256 N O N 257 N C N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N NA N 273 R C N 274 R C N 275 R C N 276 S C N 277 R C N 278 N C N 279 N C N 280 N C N 281 N N N 282 N O N 283 N O N 284 N O N 285 N O N 286 N O N 287 N O N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N N N 304 S C N 305 N C N 306 N O N 307 N C Y 308 N C Y 309 N C Y 310 N C Y 311 N C Y 312 N C Y 313 N C N 314 N O N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N N N 327 S C N 328 N C N 329 N O N 330 N C N 331 N C N 332 N C N 333 N O N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N N N 344 S C N 345 N C N 346 N O N 347 N C N 348 N O N 349 N O N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N N N 358 S C N 359 N C N 360 N O N 361 R C N 362 N O N 363 N C N 364 N O N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N N N 375 S C N 376 N C N 377 N O N 378 N C Y 379 N C Y 380 N C Y 381 N C Y 382 N N Y 383 N C Y 384 N C Y 385 N C Y 386 N C Y 387 N C N 388 N O N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N N N 402 S C N 403 N C N 404 N O N 405 N C Y 406 N C Y 407 N C Y 408 N C Y 409 N C Y 410 N C Y 411 N C N 412 N O N 413 N O N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N N N 426 S C N 427 N C Y 428 N C Y 429 N C Y 430 N C Y 431 N C Y 432 N C Y 433 N C N 434 N O N 435 N S N 436 N O N 437 N O N 438 N O N 439 N C N 440 N O N 441 N O N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N N N 454 S C N 455 N C N 456 N O N 457 N C N 458 N C N 459 N C N 460 N O N 461 N H N 462 N H N 463 N H N 464 N H N 465 N H N 466 N H N 467 N H N 468 N H N 469 N H N 470 N H N 471 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N doub N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N doub N 295 N sing N 296 N sing N 297 N sing N 298 N sing Y 299 N doub Y 300 N sing Y 301 N sing N 302 N sing Y 303 N doub N 304 N sing Y 305 N doub N 306 N sing Y 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N doub N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N doub N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N doub N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N doub N 364 N sing N 365 N sing N 366 N sing N 367 N sing Y 368 N doub Y 369 N sing Y 370 N sing N 371 N sing Y 372 N doub Y 373 N sing Y 374 N sing N 375 N sing Y 376 N sing Y 377 N doub N 378 N sing Y 379 N doub N 380 N sing Y 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N doub N 392 N sing N 393 N sing N 394 N sing N 395 N sing Y 396 N doub Y 397 N sing Y 398 N sing N 399 N sing Y 400 N doub N 401 N sing Y 402 N doub N 403 N sing Y 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing Y 418 N doub Y 419 N sing Y 420 N sing N 421 N sing Y 422 N doub N 423 N sing Y 424 N doub N 425 N sing Y 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N doub N 431 N doub N 432 N sing N 433 N sing N 434 N doub N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N doub N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing US Proc.Natl.Acad.Sci.USA PNASA6 0040 0027-8424 99 11079 11084 10.1073/pnas.162232399 12169660 Crystal structures of native and thrombin-complexed heparin cofactor II reveal a multistep allosteric mechanism. 2002 10.2210/pdb1jmo/pdb pdb_00001jmo NAG B 1 HAS WRONG CHIRALITY AT ATOM C1 NAG A 482 HAS WRONG CHIRALITY AT ATOM C1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 mirrors CCD 2001-01-30 ADSC QUANTUM 4 liquid gallium SINGLE WAVELENGTH M x-ray 1 1.4880 1.0 PX14.1 SRS 1.4880 SYNCHROTRON SRS BEAMLINE PX14.1 contains extra 13 amino acids at the N-terminus 5483.981 Thrombin, light chain light chain 1 man polymer 29921.414 Thrombin, heavy chain 3.4.21.5 heavy chain S195A 1 man polymer 55186.961 HEPARIN COFACTOR II 1 nat polymer 424.401 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 1 man branched 22.990 SODIUM ION 1 syn non-polymer 118.174 (4S)-2-METHYL-2,4-PENTANEDIOL 5 syn non-polymer 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose 2 man non-polymer 18.015 water 208 nat water COAGULATION FACTOR II COAGULATION FACTOR II HC-II; PROTEASE INHIBITOR LEUSERPIN 2; HLS2; serine (or cysteine) proteinase inhibitor, clade D (heparin cofactor), member 1 E.C.3.4.21.5 no no TATSEYQTFFNPRTFGSGEADCGLRPLFEKKSLEDKTERELLESYIDG TATSEYQTFFNPRTFGSGEADCGLRPLFEKKSLEDKTERELLESYIDG L polypeptide(L) no no RIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKIS MLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSV LQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDAGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGF YTHVFRLKKWIQKVIDQFGE RIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKIS MLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSV LQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDAGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGF YTHVFRLKKWIQKVIDQFGE H polypeptide(L) no yes GSKGPLDQLEKGGETAQSADPQWEQLNNKNLSMPLLPADFHKENTVTNDWIPEGEEDDD(TYS)LDLEKIFSEDDD (TYS)IDIVDSLSVSPTDSDVSAGNILQLFHGKSRIQRLNILNAKFAFNLYRVLKDQVNTFDNIFIAPVGISTAMGMISL GLKGETHEQVHSILHFKDFVNASSKYEITTIHNLFRKLTHRLFRRNFGYTLRSVNDLYIQKQFPILLDFKTKVREYYFAE AQIADFSDPAFISKTNNHIMKLTKGLIKDALENIDPATQMMILNCIYFKGSWVNKFPVEMTHNHNFRLNEREVVKVSMMQ TKGNFLAANDQELDCDILQLEYVGGISMLIVVPHKMSGMKTLEAQLTPRVVERWQKSMTNRTREVLLPKFKLEKNYNLVE SLKLMGIRMLFDKNGNMAGISDQRIAIDLFKHQGTITVNEEGTQATTVTTVGFMPLSTQVRFTVDRPFLFLIYEHRTSCL LFMGRVANPSRS GSKGPLDQLEKGGETAQSADPQWEQLNNKNLSMPLLPADFHKENTVTNDWIPEGEEDDDYLDLEKIFSEDDDYIDIVDSL SVSPTDSDVSAGNILQLFHGKSRIQRLNILNAKFAFNLYRVLKDQVNTFDNIFIAPVGISTAMGMISLGLKGETHEQVHS ILHFKDFVNASSKYEITTIHNLFRKLTHRLFRRNFGYTLRSVNDLYIQKQFPILLDFKTKVREYYFAEAQIADFSDPAFI SKTNNHIMKLTKGLIKDALENIDPATQMMILNCIYFKGSWVNKFPVEMTHNHNFRLNEREVVKVSMMQTKGNFLAANDQE LDCDILQLEYVGGISMLIVVPHKMSGMKTLEAQLTPRVVERWQKSMTNRTREVLLPKFKLEKNYNLVESLKLMGIRMLFD KNGNMAGISDQRIAIDLFKHQGTITVNEEGTQATTVTTVGFMPLSTQVRFTVDRPFLFLIYEHRTSCLLFMGRVANPSRS A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Chinese hamster Cricetulus sample 9606 Homo sapiens BHK culture 10029 kidney Cricetulus griseus human Homo Chinese hamster Cricetulus sample 9606 Homo sapiens BHK culture 10029 kidney Cricetulus griseus human Plasma purified Human Heparin Cofactor II Homo sample 9606 Homo sapiens blood plasma 1 4.68 73.75 VAPOR DIFFUSION, HANGING DROP 7.4 NH4Cl, PEG 3350, pH 7.4, VAPOR DIFFUSION, HANGING DROP at 298K 298 atom_site chem_comp database_PDB_caveat entity pdbx_branch_scheme pdbx_chem_comp_identifier pdbx_entity_branch pdbx_entity_branch_descriptor pdbx_entity_branch_link pdbx_entity_branch_list pdbx_entity_nonpoly pdbx_nonpoly_scheme pdbx_struct_assembly_gen pdbx_struct_conn_angle pdbx_unobs_or_zero_occ_atoms pdbx_unobs_or_zero_occ_residues pdbx_validate_chiral struct_asym struct_conn struct_ref_seq_dif struct_site struct_site_gen chem_comp database_2 pdbx_unobs_or_zero_occ_atoms pdbx_unobs_or_zero_occ_residues struct_ref_seq_dif chem_comp_atom chem_comp_bond pdbx_initial_refinement_model repository Initial release Carbohydrate remediation repository Remediation Version format compliance Non-polymer description Version format compliance Advisory Atomic model Data collection Database references Derived calculations Non-polymer description Structure summary Advisory Database references Structure summary Data collection Refinement description 1 0 2002-08-30 1 1 2008-04-27 1 2 2011-07-13 2 0 2020-07-29 2 1 2021-10-27 2 2 2024-04-03 _atom_site.B_iso_or_equiv _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.label_asym_id _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_entity_id _atom_site.type_symbol _chem_comp.formula _chem_comp.formula_weight _chem_comp.id _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.type _entity.formula_weight _entity.pdbx_description _entity.pdbx_number_of_molecules _entity.src_method _entity.type _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_role _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_ref_seq_dif.details _chem_comp.pdbx_synonyms _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details X NAG 1 n B NAG 1 X NAG 2 n B NAG 2 DGlcpNAcb N-acetyl-b-D-glucopyranosamine b-D-GlcpNAc GlcNAc RCSB Y RCSB 2001-07-19 REL REL oligosaccharide DGlcpNAcb1-4DGlcpNAcb1- 4 GMML 1.0 Glycam Condensed Sequence WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1 4 PDB2Glycan 1.1.0 WURCS []{[(4+1)][a-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}} 4 PDB-CARE LINUCS C1 O4 NAG NAG 2 1 4 O1 HO4 sing n n NA SODIUM ION MPD (4S)-2-METHYL-2,4-PENTANEDIOL NAG 2-acetamido-2-deoxy-beta-D-glucopyranose HOH water N-terminal half of native heparin cofactor II and native S195A thrombin Other experimental model NA 501 5 NA NA 501 H MPD 2003 6 MPD MPD 2003 H MPD 2004 6 MPD MPD 2004 H NAG 1 7 NAG NAG 481 A NAG 1 7 NAG NAG 482 A MPD 2001 6 MPD MPD 2001 A MPD 2002 6 MPD MPD 2002 A MPD 2005 6 MPD MPD 2005 A HOH 5 8 HOH HOH 15 L HOH 6 8 HOH HOH 16 L HOH 25 8 HOH HOH 17 L HOH 34 8 HOH HOH 18 L HOH 37 8 HOH HOH 19 L HOH 39 8 HOH HOH 20 L HOH 40 8 HOH HOH 21 L HOH 45 8 HOH HOH 22 L HOH 48 8 HOH HOH 23 L HOH 61 8 HOH HOH 24 L HOH 62 8 HOH HOH 25 L HOH 77 8 HOH HOH 26 L HOH 79 8 HOH HOH 27 L HOH 81 8 HOH HOH 28 L HOH 90 8 HOH HOH 29 L HOH 94 8 HOH HOH 30 L HOH 97 8 HOH HOH 31 L HOH 101 8 HOH HOH 32 L HOH 103 8 HOH HOH 33 L HOH 104 8 HOH HOH 34 L HOH 108 8 HOH HOH 35 L HOH 110 8 HOH HOH 36 L HOH 111 8 HOH HOH 37 L HOH 112 8 HOH HOH 38 L HOH 113 8 HOH HOH 39 L HOH 122 8 HOH HOH 40 L HOH 123 8 HOH HOH 41 L HOH 124 8 HOH HOH 42 L HOH 125 8 HOH HOH 43 L HOH 126 8 HOH HOH 44 L HOH 143 8 HOH HOH 45 L HOH 144 8 HOH HOH 46 L HOH 167 8 HOH HOH 47 L HOH 168 8 HOH HOH 48 L HOH 169 8 HOH HOH 49 L HOH 170 8 HOH HOH 50 L HOH 171 8 HOH HOH 51 L HOH 172 8 HOH HOH 52 L HOH 175 8 HOH HOH 53 L HOH 1 8 HOH HOH 2005 H HOH 2 8 HOH HOH 2006 H HOH 3 8 HOH HOH 2007 H HOH 4 8 HOH HOH 2008 H HOH 7 8 HOH HOH 2009 H HOH 8 8 HOH HOH 2010 H HOH 9 8 HOH HOH 2011 H HOH 10 8 HOH HOH 2012 H HOH 11 8 HOH HOH 2013 H HOH 12 8 HOH HOH 2014 H HOH 13 8 HOH HOH 2015 H HOH 14 8 HOH HOH 2016 H HOH 15 8 HOH HOH 2017 H HOH 16 8 HOH HOH 2018 H HOH 17 8 HOH HOH 2019 H HOH 18 8 HOH HOH 2020 H HOH 19 8 HOH HOH 2021 H HOH 20 8 HOH HOH 2022 H HOH 27 8 HOH HOH 2023 H HOH 28 8 HOH HOH 2024 H HOH 30 8 HOH HOH 2025 H HOH 32 8 HOH HOH 2026 H HOH 41 8 HOH HOH 2027 H HOH 42 8 HOH HOH 2028 H HOH 43 8 HOH HOH 2029 H HOH 49 8 HOH HOH 2030 H HOH 50 8 HOH HOH 2031 H HOH 52 8 HOH HOH 2032 H HOH 53 8 HOH HOH 2033 H HOH 54 8 HOH HOH 2034 H HOH 55 8 HOH HOH 2035 H HOH 56 8 HOH HOH 2036 H HOH 57 8 HOH HOH 2037 H HOH 58 8 HOH HOH 2038 H HOH 65 8 HOH HOH 2039 H HOH 66 8 HOH HOH 2040 H HOH 71 8 HOH HOH 2041 H HOH 74 8 HOH HOH 2042 H HOH 84 8 HOH HOH 2043 H HOH 85 8 HOH HOH 2044 H HOH 88 8 HOH HOH 2045 H HOH 91 8 HOH HOH 2046 H HOH 93 8 HOH HOH 2047 H HOH 98 8 HOH HOH 2048 H HOH 99 8 HOH HOH 2049 H HOH 102 8 HOH HOH 2050 H HOH 105 8 HOH HOH 2051 H HOH 107 8 HOH HOH 2052 H HOH 114 8 HOH HOH 2053 H HOH 127 8 HOH HOH 2054 H HOH 128 8 HOH HOH 2055 H HOH 129 8 HOH HOH 2056 H HOH 130 8 HOH HOH 2057 H HOH 131 8 HOH HOH 2058 H HOH 132 8 HOH HOH 2059 H HOH 133 8 HOH HOH 2060 H HOH 134 8 HOH HOH 2061 H HOH 135 8 HOH HOH 2062 H HOH 136 8 HOH HOH 2063 H HOH 141 8 HOH HOH 2064 H HOH 142 8 HOH HOH 2065 H HOH 145 8 HOH HOH 2066 H HOH 146 8 HOH HOH 2067 H HOH 147 8 HOH HOH 2068 H HOH 148 8 HOH HOH 2069 H HOH 150 8 HOH HOH 2070 H HOH 151 8 HOH HOH 2071 H HOH 152 8 HOH HOH 2072 H HOH 153 8 HOH HOH 2073 H HOH 173 8 HOH HOH 2074 H HOH 174 8 HOH HOH 2075 H HOH 176 8 HOH HOH 2076 H HOH 179 8 HOH HOH 2077 H HOH 180 8 HOH HOH 2078 H HOH 181 8 HOH HOH 2079 H HOH 182 8 HOH HOH 2080 H HOH 183 8 HOH HOH 2081 H HOH 184 8 HOH HOH 2082 H HOH 185 8 HOH HOH 2083 H HOH 186 8 HOH HOH 2084 H HOH 187 8 HOH HOH 2085 H HOH 188 8 HOH HOH 2086 H HOH 189 8 HOH HOH 2087 H HOH 21 8 HOH HOH 2006 A HOH 22 8 HOH HOH 2007 A HOH 23 8 HOH HOH 2008 A HOH 24 8 HOH HOH 2009 A HOH 26 8 HOH HOH 2010 A HOH 29 8 HOH HOH 2011 A HOH 31 8 HOH HOH 2012 A HOH 33 8 HOH HOH 2013 A HOH 35 8 HOH HOH 2014 A HOH 36 8 HOH HOH 2015 A HOH 38 8 HOH HOH 2016 A HOH 44 8 HOH HOH 2017 A HOH 46 8 HOH HOH 2018 A HOH 47 8 HOH HOH 2019 A HOH 51 8 HOH HOH 2020 A HOH 59 8 HOH HOH 2021 A HOH 60 8 HOH HOH 2022 A HOH 63 8 HOH HOH 2023 A HOH 64 8 HOH HOH 2024 A HOH 67 8 HOH HOH 2025 A HOH 68 8 HOH HOH 2026 A HOH 69 8 HOH HOH 2027 A HOH 70 8 HOH HOH 2028 A HOH 72 8 HOH HOH 2029 A HOH 73 8 HOH HOH 2030 A HOH 75 8 HOH HOH 2031 A HOH 76 8 HOH HOH 2032 A HOH 78 8 HOH HOH 2033 A HOH 80 8 HOH HOH 2034 A HOH 82 8 HOH HOH 2035 A HOH 83 8 HOH HOH 2036 A HOH 86 8 HOH HOH 2037 A HOH 87 8 HOH HOH 2038 A HOH 89 8 HOH HOH 2039 A HOH 92 8 HOH HOH 2040 A HOH 95 8 HOH HOH 2041 A HOH 96 8 HOH HOH 2042 A HOH 100 8 HOH HOH 2043 A HOH 106 8 HOH HOH 2044 A HOH 109 8 HOH HOH 2045 A HOH 115 8 HOH HOH 2046 A HOH 116 8 HOH HOH 2047 A HOH 117 8 HOH HOH 2048 A HOH 118 8 HOH HOH 2049 A HOH 119 8 HOH HOH 2050 A HOH 120 8 HOH HOH 2051 A HOH 121 8 HOH HOH 2052 A HOH 137 8 HOH HOH 2053 A HOH 138 8 HOH HOH 2054 A HOH 139 8 HOH HOH 2055 A HOH 140 8 HOH HOH 2056 A HOH 149 8 HOH HOH 2057 A HOH 154 8 HOH HOH 2058 A HOH 155 8 HOH HOH 2059 A HOH 156 8 HOH HOH 2060 A HOH 157 8 HOH HOH 2061 A HOH 158 8 HOH HOH 2062 A HOH 159 8 HOH HOH 2063 A HOH 160 8 HOH HOH 2064 A HOH 161 8 HOH HOH 2065 A HOH 162 8 HOH HOH 2066 A HOH 163 8 HOH HOH 2067 A HOH 164 8 HOH HOH 2068 A HOH 165 8 HOH HOH 2069 A HOH 166 8 HOH HOH 2070 A HOH 177 8 HOH HOH 2071 A HOH 178 8 HOH HOH 2072 A HOH 190 8 HOH HOH 2073 A HOH 191 8 HOH HOH 2074 A HOH 192 8 HOH HOH 2075 A HOH 193 8 HOH HOH 2076 A HOH 194 8 HOH HOH 2077 A HOH 195 8 HOH HOH 2078 A HOH 196 8 HOH HOH 2079 A HOH 197 8 HOH HOH 2080 A HOH 198 8 HOH HOH 2081 A HOH 199 8 HOH HOH 2082 A HOH 200 8 HOH HOH 2083 A HOH 201 8 HOH HOH 2084 A HOH 202 8 HOH HOH 2085 A HOH 203 8 HOH HOH 2086 A HOH 204 8 HOH HOH 2087 A HOH 205 8 HOH HOH 2088 A HOH 206 8 HOH HOH 2089 A HOH 207 8 HOH HOH 2090 A HOH 208 8 HOH HOH 2091 A n 1 U 1 L ALA 1 n 2 T ALA 1 L THR 1 n 3 S THR 1 L SER 1 n 4 R SER 1 L GLU 1 n 5 Q GLU 1 L TYR 1 n 6 P TYR 1 L GLN 1 n 7 O GLN 1 L THR 1 n 8 N THR 1 L PHE 1 n 9 M PHE 1 L PHE 1 n 10 L PHE 1 L ASN 1 n 11 K ASN 1 L PRO 1 n 12 J PRO 1 L ARG 1 n 13 I ARG 1 L THR 1 n 14 H THR 1 L PHE 1 n 15 G PHE 1 L GLY 1 n 16 F GLY 1 L SER 1 n 17 E SER 1 L GLY 1 n 18 D GLY 1 L GLU 1 n 19 C GLU 1 L ALA 1 n 20 B ALA 1 L ASP 1 n 21 A ASP 1 L CYS 1 n 22 CYS 1 L GLY 2 n 23 GLY 2 L LEU 3 n 24 LEU 3 L ARG 4 n 25 ARG 4 L PRO 5 n 26 PRO 5 L LEU 6 n 27 LEU 6 L PHE 7 n 28 PHE 7 L GLU 8 n 29 GLU 8 L LYS 9 n 30 LYS 9 L LYS 10 n 31 LYS 10 L SER 11 n 32 SER 11 L LEU 12 n 33 LEU 12 L GLU 13 n 34 GLU 13 L ASP 14 n 35 ASP 14 L LYS 14 n 36 A LYS 14 L THR 14 n 37 B THR 14 L GLU 14 n 38 C GLU 14 L ARG 14 n 39 D ARG 14 L GLU 14 n 40 E GLU 14 L LEU 14 n 41 F LEU 14 L LEU 14 n 42 G LEU 14 L GLU 14 n 43 H GLU 14 L SER 14 n 44 I SER 14 L TYR 14 n 45 J TYR 14 L ILE 14 n 46 K ILE 14 L ASP 14 n 47 L ASP 14 L GLY 14 n 48 M GLY 14 L n 1 15 H ILE 16 n 2 ILE 16 H VAL 17 n 3 VAL 17 H GLU 18 n 4 GLU 18 H GLY 19 n 5 GLY 19 H SER 20 n 6 SER 20 H ASP 21 n 7 ASP 21 H ALA 22 n 8 ALA 22 H GLU 23 n 9 GLU 23 H ILE 24 n 10 ILE 24 H GLY 25 n 11 GLY 25 H MET 26 n 12 MET 26 H SER 27 n 13 SER 27 H PRO 28 n 14 PRO 28 H TRP 29 n 15 TRP 29 H GLN 30 n 16 GLN 30 H VAL 31 n 17 VAL 31 H MET 32 n 18 MET 32 H LEU 33 n 19 LEU 33 H PHE 34 n 20 PHE 34 H ARG 35 n 21 ARG 35 H LYS 36 n 22 LYS 36 H SER 36 n 23 A SER 36 H PRO 37 n 24 PRO 37 H GLN 38 n 25 GLN 38 H GLU 39 n 26 GLU 39 H LEU 40 n 27 LEU 40 H LEU 41 n 28 LEU 41 H CYS 42 n 29 CYS 42 H GLY 43 n 30 GLY 43 H ALA 44 n 31 ALA 44 H SER 45 n 32 SER 45 H LEU 46 n 33 LEU 46 H ILE 47 n 34 ILE 47 H SER 48 n 35 SER 48 H ASP 49 n 36 ASP 49 H ARG 50 n 37 ARG 50 H TRP 51 n 38 TRP 51 H VAL 52 n 39 VAL 52 H LEU 53 n 40 LEU 53 H THR 54 n 41 THR 54 H ALA 55 n 42 ALA 55 H ALA 56 n 43 ALA 56 H HIS 57 n 44 HIS 57 H CYS 58 n 45 CYS 58 H LEU 59 n 46 LEU 59 H LEU 60 n 47 LEU 60 H TYR 60 n 48 A TYR 60 H PRO 60 n 49 B PRO 60 H PRO 60 n 50 C PRO 60 H TRP 60 n 51 D TRP 60 H ASP 60 n 52 E ASP 60 H LYS 60 n 53 F LYS 60 H ASN 60 n 54 G ASN 60 H PHE 60 n 55 H PHE 60 H THR 60 n 56 I THR 60 H GLU 61 n 57 GLU 61 H ASN 62 n 58 ASN 62 H ASP 63 n 59 ASP 63 H LEU 64 n 60 LEU 64 H LEU 65 n 61 LEU 65 H VAL 66 n 62 VAL 66 H ARG 67 n 63 ARG 67 H ILE 68 n 64 ILE 68 H GLY 69 n 65 GLY 69 H LYS 70 n 66 LYS 70 H HIS 71 n 67 HIS 71 H SER 72 n 68 SER 72 H ARG 73 n 69 ARG 73 H THR 74 n 70 THR 74 H ARG 75 n 71 ARG 75 H TYR 76 n 72 TYR 76 H GLU 77 n 73 GLU 77 H ARG 77 n 74 A ARG 77 H ASN 78 n 75 ASN 78 H ILE 79 n 76 ILE 79 H GLU 80 n 77 GLU 80 H LYS 81 n 78 LYS 81 H ILE 82 n 79 ILE 82 H SER 83 n 80 SER 83 H MET 84 n 81 MET 84 H LEU 85 n 82 LEU 85 H GLU 86 n 83 GLU 86 H LYS 87 n 84 LYS 87 H ILE 88 n 85 ILE 88 H TYR 89 n 86 TYR 89 H ILE 90 n 87 ILE 90 H HIS 91 n 88 HIS 91 H PRO 92 n 89 PRO 92 H ARG 93 n 90 ARG 93 H TYR 94 n 91 TYR 94 H ASN 95 n 92 ASN 95 H TRP 96 n 93 TRP 96 H ARG 97 n 94 ARG 97 H GLU 97 n 95 A GLU 97 H ASN 98 n 96 ASN 98 H LEU 99 n 97 LEU 99 H ASP 100 n 98 ASP 100 H ARG 101 n 99 ARG 101 H ASP 102 n 100 ASP 102 H ILE 103 n 101 ILE 103 H ALA 104 n 102 ALA 104 H LEU 105 n 103 LEU 105 H MET 106 n 104 MET 106 H LYS 107 n 105 LYS 107 H LEU 108 n 106 LEU 108 H LYS 109 n 107 LYS 109 H LYS 110 n 108 LYS 110 H PRO 111 n 109 PRO 111 H VAL 112 n 110 VAL 112 H ALA 113 n 111 ALA 113 H PHE 114 n 112 PHE 114 H SER 115 n 113 SER 115 H ASP 116 n 114 ASP 116 H TYR 117 n 115 TYR 117 H ILE 118 n 116 ILE 118 H HIS 119 n 117 HIS 119 H PRO 120 n 118 PRO 120 H VAL 121 n 119 VAL 121 H CYS 122 n 120 CYS 122 H LEU 123 n 121 LEU 123 H PRO 124 n 122 PRO 124 H ASP 125 n 123 ASP 125 H ARG 126 n 124 ARG 126 H GLU 127 n 125 GLU 127 H THR 128 n 126 THR 128 H ALA 129 n 127 ALA 129 H ALA 129 n 128 A ALA 129 H SER 129 n 129 B SER 129 H LEU 129 n 130 C LEU 129 H LEU 130 n 131 LEU 130 H GLN 131 n 132 GLN 131 H ALA 132 n 133 ALA 132 H GLY 133 n 134 GLY 133 H TYR 134 n 135 TYR 134 H LYS 135 n 136 LYS 135 H GLY 136 n 137 GLY 136 H ARG 137 n 138 ARG 137 H VAL 138 n 139 VAL 138 H THR 139 n 140 THR 139 H GLY 140 n 141 GLY 140 H TRP 141 n 142 TRP 141 H GLY 142 n 143 GLY 142 H ASN 143 n 144 ASN 143 H LEU 144 n 145 LEU 144 H LYS 145 n 146 LYS 145 H GLU 146 n 147 GLU 146 H THR 147 n 148 THR 147 H TRP 147 n 149 A TRP 147 H THR 147 n 150 B THR 147 H ALA 147 n 151 C ALA 147 H ASN 147 n 152 D ASN 147 H VAL 147 n 153 E VAL 147 H GLY 148 n 154 GLY 148 H LYS 149 n 155 LYS 149 H GLY 150 n 156 GLY 150 H GLN 151 n 157 GLN 151 H PRO 152 n 158 PRO 152 H SER 153 n 159 SER 153 H VAL 154 n 160 VAL 154 H LEU 155 n 161 LEU 155 H GLN 156 n 162 GLN 156 H VAL 157 n 163 VAL 157 H VAL 158 n 164 VAL 158 H ASN 159 n 165 ASN 159 H LEU 160 n 166 LEU 160 H PRO 161 n 167 PRO 161 H ILE 162 n 168 ILE 162 H VAL 163 n 169 VAL 163 H GLU 164 n 170 GLU 164 H ARG 165 n 171 ARG 165 H PRO 166 n 172 PRO 166 H VAL 167 n 173 VAL 167 H CYS 168 n 174 CYS 168 H LYS 169 n 175 LYS 169 H ASP 170 n 176 ASP 170 H SER 171 n 177 SER 171 H THR 172 n 178 THR 172 H ARG 173 n 179 ARG 173 H ILE 174 n 180 ILE 174 H ARG 175 n 181 ARG 175 H ILE 176 n 182 ILE 176 H THR 177 n 183 THR 177 H ASP 178 n 184 ASP 178 H ASN 179 n 185 ASN 179 H MET 180 n 186 MET 180 H PHE 181 n 187 PHE 181 H CYS 182 n 188 CYS 182 H ALA 183 n 189 ALA 183 H GLY 184 n 190 GLY 184 H TYR 184 n 191 A TYR 184 H LYS 185 n 192 LYS 185 H PRO 186 n 193 PRO 186 H ASP 186 n 194 A ASP 186 H GLU 186 n 195 B GLU 186 H GLY 186 n 196 C GLY 186 H LYS 186 n 197 D LYS 186 H ARG 187 n 198 ARG 187 H GLY 188 n 199 GLY 188 H ASP 189 n 200 ASP 189 H ALA 190 n 201 ALA 190 H CYS 191 n 202 CYS 191 H GLU 192 n 203 GLU 192 H GLY 193 n 204 GLY 193 H ASP 194 n 205 ASP 194 H ALA 195 n 206 ALA 195 H GLY 196 n 207 GLY 196 H GLY 197 n 208 GLY 197 H PRO 198 n 209 PRO 198 H PHE 199 n 210 PHE 199 H VAL 200 n 211 VAL 200 H MET 201 n 212 MET 201 H LYS 202 n 213 LYS 202 H SER 203 n 214 SER 203 H PRO 204 n 215 PRO 204 H PHE 204 n 216 A PHE 204 H ASN 204 n 217 B ASN 204 H ASN 205 n 218 ASN 205 H ARG 206 n 219 ARG 206 H TRP 207 n 220 TRP 207 H TYR 208 n 221 TYR 208 H GLN 209 n 222 GLN 209 H MET 210 n 223 MET 210 H GLY 211 n 224 GLY 211 H ILE 212 n 225 ILE 212 H VAL 213 n 226 VAL 213 H SER 214 n 227 SER 214 H TRP 215 n 228 TRP 215 H GLY 216 n 229 GLY 216 H GLU 217 n 230 GLU 217 H GLY 219 n 231 GLY 219 H CYS 220 n 232 CYS 220 H ASP 221 n 233 ASP 221 H ARG 221 n 234 A ARG 221 H ASP 222 n 235 ASP 222 H GLY 223 n 236 GLY 223 H LYS 224 n 237 LYS 224 H TYR 225 n 238 TYR 225 H GLY 226 n 239 GLY 226 H PHE 227 n 240 PHE 227 H TYR 228 n 241 TYR 228 H THR 229 n 242 THR 229 H HIS 230 n 243 HIS 230 H VAL 231 n 244 VAL 231 H PHE 232 n 245 PHE 232 H ARG 233 n 246 ARG 233 H LEU 234 n 247 LEU 234 H LYS 235 n 248 LYS 235 H LYS 236 n 249 LYS 236 H TRP 237 n 250 TRP 237 H ILE 238 n 251 ILE 238 H GLN 239 n 252 GLN 239 H LYS 240 n 253 LYS 240 H VAL 241 n 254 VAL 241 H ILE 242 n 255 ILE 242 H ASP 243 n 256 ASP 243 H GLN 244 n 257 GLN 244 H PHE 245 n 258 PHE 245 H GLY 246 n 259 GLY 246 H GLU 247 n 260 GLU 247 H n 1 1 A n 2 2 A n 3 3 A n 4 4 A n 5 5 A n 6 6 A n 7 7 A n 8 8 A n 9 9 A n 10 10 A n 11 11 A n 12 12 A n 13 13 A n 14 14 A n 15 15 A n 16 16 A n 17 17 A n 18 18 A n 19 19 A n 20 20 A n 21 21 A n 22 22 A n 23 23 A n 24 24 A n 25 25 A n 26 26 A n 27 27 A n 28 28 A n 29 29 A n 30 30 A n 31 31 A n 32 32 A n 33 33 A n 34 34 A n 35 35 A n 36 36 A n 37 37 A n 38 38 A n 39 39 A n 40 40 A n 41 41 A n 42 42 A n 43 43 A n 44 44 A n 45 45 A n 46 46 A n 47 47 A n 48 48 A n 49 49 A n 50 50 A n 51 51 A n 52 52 A n 53 53 A GLY 54 n 54 GLY 54 A GLU 55 n 55 GLU 55 A GLU 56 n 56 GLU 56 A ASP 57 n 57 ASP 57 A ASP 58 n 58 ASP 58 A ASP 59 n 59 ASP 59 A STY 60 n 60 TYS 60 A LEU 61 n 61 LEU 61 A ASP 62 n 62 ASP 62 A LEU 63 n 63 LEU 63 A GLU 64 n 64 GLU 64 A LYS 65 n 65 LYS 65 A ILE 66 n 66 ILE 66 A PHE 67 n 67 PHE 67 A SER 68 n 68 SER 68 A GLU 69 n 69 GLU 69 A ASP 70 n 70 ASP 70 A ASP 71 n 71 ASP 71 A ASP 72 n 72 ASP 72 A STY 73 n 73 TYS 73 A ILE 74 n 74 ILE 74 A ASP 75 n 75 ASP 75 A ILE 76 n 76 ILE 76 A VAL 77 n 77 VAL 77 A ASP 78 n 78 ASP 78 A SER 79 n 79 SER 79 A LEU 80 n 80 LEU 80 A SER 81 n 81 SER 81 A VAL 82 n 82 VAL 82 A SER 83 n 83 SER 83 A PRO 84 n 84 PRO 84 A THR 85 n 85 THR 85 A ASP 86 n 86 ASP 86 A SER 87 n 87 SER 87 A ASP 88 n 88 ASP 88 A VAL 89 n 89 VAL 89 A SER 90 n 90 SER 90 A ALA 91 n 91 ALA 91 A GLY 92 n 92 GLY 92 A ASN 93 n 93 ASN 93 A ILE 94 n 94 ILE 94 A LEU 95 n 95 LEU 95 A GLN 96 n 96 GLN 96 A LEU 97 n 97 LEU 97 A PHE 98 n 98 PHE 98 A HIS 99 n 99 HIS 99 A GLY 100 n 100 GLY 100 A LYS 101 n 101 LYS 101 A SER 102 n 102 SER 102 A ARG 103 n 103 ARG 103 A ILE 104 n 104 ILE 104 A GLN 105 n 105 GLN 105 A ARG 106 n 106 ARG 106 A LEU 107 n 107 LEU 107 A ASN 108 n 108 ASN 108 A ILE 109 n 109 ILE 109 A LEU 110 n 110 LEU 110 A ASN 111 n 111 ASN 111 A ALA 112 n 112 ALA 112 A LYS 113 n 113 LYS 113 A PHE 114 n 114 PHE 114 A ALA 115 n 115 ALA 115 A PHE 116 n 116 PHE 116 A ASN 117 n 117 ASN 117 A LEU 118 n 118 LEU 118 A TYR 119 n 119 TYR 119 A ARG 120 n 120 ARG 120 A VAL 121 n 121 VAL 121 A LEU 122 n 122 LEU 122 A LYS 123 n 123 LYS 123 A ASP 124 n 124 ASP 124 A GLN 125 n 125 GLN 125 A VAL 126 n 126 VAL 126 A ASN 127 n 127 ASN 127 A THR 128 n 128 THR 128 A PHE 129 n 129 PHE 129 A ASP 130 n 130 ASP 130 A ASN 131 n 131 ASN 131 A ILE 132 n 132 ILE 132 A PHE 133 n 133 PHE 133 A ILE 134 n 134 ILE 134 A ALA 135 n 135 ALA 135 A PRO 136 n 136 PRO 136 A VAL 137 n 137 VAL 137 A GLY 138 n 138 GLY 138 A ILE 139 n 139 ILE 139 A SER 140 n 140 SER 140 A THR 141 n 141 THR 141 A ALA 142 n 142 ALA 142 A MET 143 n 143 MET 143 A GLY 144 n 144 GLY 144 A MET 145 n 145 MET 145 A ILE 146 n 146 ILE 146 A SER 147 n 147 SER 147 A LEU 148 n 148 LEU 148 A GLY 149 n 149 GLY 149 A LEU 150 n 150 LEU 150 A LYS 151 n 151 LYS 151 A GLY 152 n 152 GLY 152 A GLU 153 n 153 GLU 153 A THR 154 n 154 THR 154 A HIS 155 n 155 HIS 155 A GLU 156 n 156 GLU 156 A GLN 157 n 157 GLN 157 A VAL 158 n 158 VAL 158 A HIS 159 n 159 HIS 159 A SER 160 n 160 SER 160 A ILE 161 n 161 ILE 161 A LEU 162 n 162 LEU 162 A HIS 163 n 163 HIS 163 A PHE 164 n 164 PHE 164 A LYS 165 n 165 LYS 165 A ASP 166 n 166 ASP 166 A PHE 167 n 167 PHE 167 A VAL 168 n 168 VAL 168 A ASN 169 n 169 ASN 169 A ALA 170 n 170 ALA 170 A SER 171 n 171 SER 171 A SER 172 n 172 SER 172 A LYS 173 n 173 LYS 173 A TYR 174 n 174 TYR 174 A GLU 175 n 175 GLU 175 A ILE 176 n 176 ILE 176 A THR 177 n 177 THR 177 A THR 178 n 178 THR 178 A ILE 179 n 179 ILE 179 A HIS 180 n 180 HIS 180 A ASN 181 n 181 ASN 181 A LEU 182 n 182 LEU 182 A PHE 183 n 183 PHE 183 A ARG 184 n 184 ARG 184 A LYS 185 n 185 LYS 185 A LEU 186 n 186 LEU 186 A THR 187 n 187 THR 187 A HIS 188 n 188 HIS 188 A ARG 189 n 189 ARG 189 A LEU 190 n 190 LEU 190 A PHE 191 n 191 PHE 191 A ARG 192 n 192 ARG 192 A ARG 193 n 193 ARG 193 A ASN 194 n 194 ASN 194 A PHE 195 n 195 PHE 195 A GLY 196 n 196 GLY 196 A TYR 197 n 197 TYR 197 A THR 198 n 198 THR 198 A LEU 199 n 199 LEU 199 A ARG 200 n 200 ARG 200 A SER 201 n 201 SER 201 A VAL 202 n 202 VAL 202 A ASN 203 n 203 ASN 203 A ASP 204 n 204 ASP 204 A LEU 205 n 205 LEU 205 A TYR 206 n 206 TYR 206 A ILE 207 n 207 ILE 207 A GLN 208 n 208 GLN 208 A LYS 209 n 209 LYS 209 A GLN 210 n 210 GLN 210 A PHE 211 n 211 PHE 211 A PRO 212 n 212 PRO 212 A ILE 213 n 213 ILE 213 A LEU 214 n 214 LEU 214 A LEU 215 n 215 LEU 215 A ASP 216 n 216 ASP 216 A PHE 217 n 217 PHE 217 A LYS 218 n 218 LYS 218 A THR 219 n 219 THR 219 A LYS 220 n 220 LYS 220 A VAL 221 n 221 VAL 221 A ARG 222 n 222 ARG 222 A GLU 223 n 223 GLU 223 A TYR 224 n 224 TYR 224 A TYR 225 n 225 TYR 225 A PHE 226 n 226 PHE 226 A ALA 227 n 227 ALA 227 A GLU 228 n 228 GLU 228 A ALA 229 n 229 ALA 229 A GLN 230 n 230 GLN 230 A ILE 231 n 231 ILE 231 A ALA 232 n 232 ALA 232 A ASP 233 n 233 ASP 233 A PHE 234 n 234 PHE 234 A SER 235 n 235 SER 235 A ASP 236 n 236 ASP 236 A PRO 237 n 237 PRO 237 A ALA 238 n 238 ALA 238 A PHE 239 n 239 PHE 239 A ILE 240 n 240 ILE 240 A SER 241 n 241 SER 241 A LYS 242 n 242 LYS 242 A THR 243 n 243 THR 243 A ASN 244 n 244 ASN 244 A ASN 245 n 245 ASN 245 A HIS 246 n 246 HIS 246 A ILE 247 n 247 ILE 247 A MET 248 n 248 MET 248 A LYS 249 n 249 LYS 249 A LEU 250 n 250 LEU 250 A THR 251 n 251 THR 251 A LYS 252 n 252 LYS 252 A GLY 253 n 253 GLY 253 A LEU 254 n 254 LEU 254 A ILE 255 n 255 ILE 255 A LYS 256 n 256 LYS 256 A ASP 257 n 257 ASP 257 A ALA 258 n 258 ALA 258 A LEU 259 n 259 LEU 259 A GLU 260 n 260 GLU 260 A ASN 261 n 261 ASN 261 A ILE 262 n 262 ILE 262 A ASP 263 n 263 ASP 263 A PRO 264 n 264 PRO 264 A ALA 265 n 265 ALA 265 A THR 266 n 266 THR 266 A GLN 267 n 267 GLN 267 A MET 268 n 268 MET 268 A MET 269 n 269 MET 269 A ILE 270 n 270 ILE 270 A LEU 271 n 271 LEU 271 A ASN 272 n 272 ASN 272 A CYS 273 n 273 CYS 273 A ILE 274 n 274 ILE 274 A TYR 275 n 275 TYR 275 A PHE 276 n 276 PHE 276 A LYS 277 n 277 LYS 277 A GLY 278 n 278 GLY 278 A SER 279 n 279 SER 279 A TRP 280 n 280 TRP 280 A VAL 281 n 281 VAL 281 A ASN 282 n 282 ASN 282 A LYS 283 n 283 LYS 283 A PHE 284 n 284 PHE 284 A PRO 285 n 285 PRO 285 A VAL 286 n 286 VAL 286 A GLU 287 n 287 GLU 287 A MET 288 n 288 MET 288 A THR 289 n 289 THR 289 A HIS 290 n 290 HIS 290 A ASN 291 n 291 ASN 291 A HIS 292 n 292 HIS 292 A ASN 293 n 293 ASN 293 A PHE 294 n 294 PHE 294 A ARG 295 n 295 ARG 295 A LEU 296 n 296 LEU 296 A ASN 297 n 297 ASN 297 A GLU 298 n 298 GLU 298 A ARG 299 n 299 ARG 299 A GLU 300 n 300 GLU 300 A VAL 301 n 301 VAL 301 A VAL 302 n 302 VAL 302 A LYS 303 n 303 LYS 303 A VAL 304 n 304 VAL 304 A SER 305 n 305 SER 305 A MET 306 n 306 MET 306 A MET 307 n 307 MET 307 A GLN 308 n 308 GLN 308 A THR 309 n 309 THR 309 A LYS 310 n 310 LYS 310 A GLY 311 n 311 GLY 311 A ASN 312 n 312 ASN 312 A PHE 313 n 313 PHE 313 A LEU 314 n 314 LEU 314 A ALA 315 n 315 ALA 315 A ALA 316 n 316 ALA 316 A ASN 317 n 317 ASN 317 A ASP 318 n 318 ASP 318 A GLN 319 n 319 GLN 319 A GLU 320 n 320 GLU 320 A LEU 321 n 321 LEU 321 A ASP 322 n 322 ASP 322 A CYS 323 n 323 CYS 323 A ASP 324 n 324 ASP 324 A ILE 325 n 325 ILE 325 A LEU 326 n 326 LEU 326 A GLN 327 n 327 GLN 327 A LEU 328 n 328 LEU 328 A GLU 329 n 329 GLU 329 A TYR 330 n 330 TYR 330 A VAL 331 n 331 VAL 331 A GLY 332 n 332 GLY 332 A GLY 333 n 333 GLY 333 A ILE 334 n 334 ILE 334 A SER 335 n 335 SER 335 A MET 336 n 336 MET 336 A LEU 337 n 337 LEU 337 A ILE 338 n 338 ILE 338 A VAL 339 n 339 VAL 339 A VAL 340 n 340 VAL 340 A PRO 341 n 341 PRO 341 A HIS 342 n 342 HIS 342 A LYS 343 n 343 LYS 343 A MET 344 n 344 MET 344 A SER 345 n 345 SER 345 A GLY 346 n 346 GLY 346 A MET 347 n 347 MET 347 A LYS 348 n 348 LYS 348 A THR 349 n 349 THR 349 A LEU 350 n 350 LEU 350 A GLU 351 n 351 GLU 351 A ALA 352 n 352 ALA 352 A GLN 353 n 353 GLN 353 A LEU 354 n 354 LEU 354 A THR 355 n 355 THR 355 A PRO 356 n 356 PRO 356 A ARG 357 n 357 ARG 357 A VAL 358 n 358 VAL 358 A VAL 359 n 359 VAL 359 A GLU 360 n 360 GLU 360 A ARG 361 n 361 ARG 361 A TRP 362 n 362 TRP 362 A GLN 363 n 363 GLN 363 A LYS 364 n 364 LYS 364 A SER 365 n 365 SER 365 A MET 366 n 366 MET 366 A THR 367 n 367 THR 367 A ASN 368 n 368 ASN 368 A ARG 369 n 369 ARG 369 A THR 370 n 370 THR 370 A ARG 371 n 371 ARG 371 A GLU 372 n 372 GLU 372 A VAL 373 n 373 VAL 373 A LEU 374 n 374 LEU 374 A LEU 375 n 375 LEU 375 A PRO 376 n 376 PRO 376 A LYS 377 n 377 LYS 377 A PHE 378 n 378 PHE 378 A LYS 379 n 379 LYS 379 A LEU 380 n 380 LEU 380 A GLU 381 n 381 GLU 381 A LYS 382 n 382 LYS 382 A ASN 383 n 383 ASN 383 A TYR 384 n 384 TYR 384 A ASN 385 n 385 ASN 385 A LEU 386 n 386 LEU 386 A VAL 387 n 387 VAL 387 A GLU 388 n 388 GLU 388 A SER 389 n 389 SER 389 A LEU 390 n 390 LEU 390 A LYS 391 n 391 LYS 391 A LEU 392 n 392 LEU 392 A MET 393 n 393 MET 393 A GLY 394 n 394 GLY 394 A ILE 395 n 395 ILE 395 A ARG 396 n 396 ARG 396 A MET 397 n 397 MET 397 A LEU 398 n 398 LEU 398 A PHE 399 n 399 PHE 399 A ASP 400 n 400 ASP 400 A LYS 401 n 401 LYS 401 A ASN 402 n 402 ASN 402 A GLY 403 n 403 GLY 403 A ASN 404 n 404 ASN 404 A MET 405 n 405 MET 405 A ALA 406 n 406 ALA 406 A GLY 407 n 407 GLY 407 A ILE 408 n 408 ILE 408 A SER 409 n 409 SER 409 A ASP 410 n 410 ASP 410 A GLN 411 n 411 GLN 411 A ARG 412 n 412 ARG 412 A ILE 413 n 413 ILE 413 A ALA 414 n 414 ALA 414 A ILE 415 n 415 ILE 415 A ASP 416 n 416 ASP 416 A LEU 417 n 417 LEU 417 A PHE 418 n 418 PHE 418 A LYS 419 n 419 LYS 419 A HIS 420 n 420 HIS 420 A GLN 421 n 421 GLN 421 A GLY 422 n 422 GLY 422 A THR 423 n 423 THR 423 A ILE 424 n 424 ILE 424 A THR 425 n 425 THR 425 A VAL 426 n 426 VAL 426 A ASN 427 n 427 ASN 427 A GLU 428 n 428 GLU 428 A GLU 429 n 429 GLU 429 A GLY 430 n 430 GLY 430 A THR 431 n 431 THR 431 A GLN 432 n 432 GLN 432 A ALA 433 n 433 ALA 433 A THR 434 n 434 THR 434 A THR 435 n 435 THR 435 A VAL 436 n 436 VAL 436 A THR 437 n 437 THR 437 A THR 438 n 438 THR 438 A VAL 439 n 439 VAL 439 A GLY 440 n 440 GLY 440 A PHE 441 n 441 PHE 441 A MET 442 n 442 MET 442 A PRO 443 n 443 PRO 443 A LEU 444 n 444 LEU 444 A SER 445 n 445 SER 445 A THR 446 n 446 THR 446 A GLN 447 n 447 GLN 447 A VAL 448 n 448 VAL 448 A ARG 449 n 449 ARG 449 A PHE 450 n 450 PHE 450 A THR 451 n 451 THR 451 A VAL 452 n 452 VAL 452 A ASP 453 n 453 ASP 453 A ARG 454 n 454 ARG 454 A PRO 455 n 455 PRO 455 A PHE 456 n 456 PHE 456 A LEU 457 n 457 LEU 457 A PHE 458 n 458 PHE 458 A LEU 459 n 459 LEU 459 A ILE 460 n 460 ILE 460 A TYR 461 n 461 TYR 461 A GLU 462 n 462 GLU 462 A HIS 463 n 463 HIS 463 A ARG 464 n 464 ARG 464 A THR 465 n 465 THR 465 A SER 466 n 466 SER 466 A CYS 467 n 467 CYS 467 A LEU 468 n 468 LEU 468 A LEU 469 n 469 LEU 469 A PHE 470 n 470 PHE 470 A MET 471 n 471 MET 471 A GLY 472 n 472 GLY 472 A ARG 473 n 473 ARG 473 A VAL 474 n 474 VAL 474 A ALA 475 n 475 ALA 475 A ASN 476 n 476 ASN 476 A PRO 477 n 477 PRO 477 A SER 478 n 478 SER 478 A ARG 479 n 479 ARG 479 A SER 480 n 480 SER 480 A author_and_software_defined_assembly PISA 3 trimeric 9230 -72 33000 H LYS 224 B O LYS 237 1_555 H NA 501 E NA NA 1_555 H HOH 2048 N O HOH 1_555 122.8 G H ASN 60 GLYCOSYLATION SITE B ASN 54 ASN A ASN 169 GLYCOSYLATION SITE C ASN 169 ASN A ASN 368 GLYCOSYLATION SITE C ASN 368 ASN A TYS 60 O-SULFO-L-TYROSINE C TYS 60 TYR A TYS 73 O-SULFO-L-TYROSINE C TYS 73 TYR 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 H N ALA 183 B N ALA 189 H O GLY 226 B O GLY 239 H N THR 229 B N THR 242 H O ILE 212 B O ILE 225 H O GLY 211 B O GLY 224 H N PHE 199 B N PHE 210 H O VAL 200 B O VAL 211 H N ARG 137 B N ARG 138 H O GLY 140 B O GLY 141 H N GLN 156 B N GLN 162 H N VAL 157 B N VAL 163 H O SER 20 B O SER 6 H N ALA 183 B N ALA 189 H O GLY 226 B O GLY 239 H N THR 229 B N THR 242 H O ILE 212 B O ILE 225 H O GLY 216 B O GLY 229 A N MET 442 C N MET 442 H N ARG 35 B N ARG 21 H O GLU 39 B O GLU 26 H O SER 45 B O SER 32 H N LEU 53 B N LEU 40 H O THR 54 B O THR 41 H N ALA 104 B N ALA 102 H O LYS 107 B O LYS 105 H N GLU 86 B N GLU 83 H N LEU 85 B N LEU 82 H O LEU 64 B O LEU 60 H O ARG 67 B O ARG 63 H N MET 32 B N MET 18 A N PHE 450 C N PHE 450 A O GLU 372 C O GLU 372 A O LEU 375 C O LEU 375 A N MET 307 C N MET 307 A N MET 306 C N MET 306 A O HIS 290 C O HIS 290 A N PHE 450 C N PHE 450 A O GLU 372 C O GLU 372 A O LEU 375 C O LEU 375 A N MET 307 C N MET 307 A N ASP 318 C N ASP 318 A O CYS 323 C O CYS 323 A N TYR 330 C N TYR 330 A O ILE 334 C O ILE 334 A N VAL 339 C N VAL 339 A O LEU 457 C O LEU 457 A N GLU 462 C N GLU 462 A O CYS 467 C O CYS 467 A O ARG 473 C O ARG 473 A N ILE 132 C N ILE 132 A N GLN 230 C N GLN 230 A O LEU 205 C O LEU 205 A N TYR 206 C N TYR 206 A O MET 269 C O MET 269 A O MET 268 C O MET 268 A N ASP 416 C N ASP 416 A N VAL 426 C N VAL 426 A O PHE 378 C O PHE 378 A N GLN 230 C N GLN 230 A O LEU 205 C O LEU 205 A N TYR 206 C N TYR 206 A O MET 269 C O MET 269 A O MET 268 C O MET 268 A N ASP 416 C N ASP 416 A O HIS 420 C O HIS 420 A N TYR 384 C N TYR 384 1 H CE LYS 240 B CE LYS 253 0 Y 1 H NZ LYS 240 B NZ LYS 253 0 Y 1 A NZ LYS 185 C NZ LYS 185 0 Y 1 A OD2 ASP 216 C OD2 ASP 216 0 Y 1 A CD LYS 249 C CD LYS 249 0 Y 1 A CE LYS 249 C CE LYS 249 0 Y 1 A NZ LYS 249 C NZ LYS 249 0 Y 1 A OE1 GLU 300 C OE1 GLU 300 0 Y 1 A CE LYS 348 C CE LYS 348 0 Y 1 A NZ LYS 348 C NZ LYS 348 0 Y 1 A CD1 ILE 413 C CD1 ILE 413 0 Y U 1 L THR 1 A THR 1 1 Y 1 H ARG 15 B ARG 1 1 Y 1 A GLY 1 C GLY 1 1 Y 1 A SER 2 C SER 2 1 Y 1 A LYS 3 C LYS 3 1 Y 1 A GLY 4 C GLY 4 1 Y 1 A PRO 5 C PRO 5 1 Y 1 A LEU 6 C LEU 6 1 Y 1 A ASP 7 C ASP 7 1 Y 1 A GLN 8 C GLN 8 1 Y 1 A LEU 9 C LEU 9 1 Y 1 A GLU 10 C GLU 10 1 Y 1 A LYS 11 C LYS 11 1 Y 1 A GLY 12 C GLY 12 1 Y 1 A GLY 13 C GLY 13 1 Y 1 A GLU 14 C GLU 14 1 Y 1 A THR 15 C THR 15 1 Y 1 A ALA 16 C ALA 16 1 Y 1 A GLN 17 C GLN 17 1 Y 1 A SER 18 C SER 18 1 Y 1 A ALA 19 C ALA 19 1 Y 1 A ASP 20 C ASP 20 1 Y 1 A PRO 21 C PRO 21 1 Y 1 A GLN 22 C GLN 22 1 Y 1 A TRP 23 C TRP 23 1 Y 1 A GLU 24 C GLU 24 1 Y 1 A GLN 25 C GLN 25 1 Y 1 A LEU 26 C LEU 26 1 Y 1 A ASN 27 C ASN 27 1 Y 1 A ASN 28 C ASN 28 1 Y 1 A LYS 29 C LYS 29 1 Y 1 A ASN 30 C ASN 30 1 Y 1 A LEU 31 C LEU 31 1 Y 1 A SER 32 C SER 32 1 Y 1 A MET 33 C MET 33 1 Y 1 A PRO 34 C PRO 34 1 Y 1 A LEU 35 C LEU 35 1 Y 1 A LEU 36 C LEU 36 1 Y 1 A PRO 37 C PRO 37 1 Y 1 A ALA 38 C ALA 38 1 Y 1 A ASP 39 C ASP 39 1 Y 1 A PHE 40 C PHE 40 1 Y 1 A HIS 41 C HIS 41 1 Y 1 A LYS 42 C LYS 42 1 Y 1 A GLU 43 C GLU 43 1 Y 1 A ASN 44 C ASN 44 1 Y 1 A THR 45 C THR 45 1 Y 1 A VAL 46 C VAL 46 1 Y 1 A THR 47 C THR 47 1 Y 1 A ASN 48 C ASN 48 1 Y 1 A ASP 49 C ASP 49 1 Y 1 A TRP 50 C TRP 50 1 Y 1 A ILE 51 C ILE 51 1 Y 1 A PRO 52 C PRO 52 1 Y 1 A GLU 53 C GLU 53 1 Y 1 A SER 83 C SER 83 0 Y 1 A PRO 84 C PRO 84 0 Y 1 A THR 85 C THR 85 0 Y 1 A ASP 86 C ASP 86 0 Y 1 A SER 87 C SER 87 0 Y 1 A ASP 88 C ASP 88 0 Y 1 A VAL 89 C VAL 89 0 Y 1 A SER 90 C SER 90 0 Y 1 A ALA 91 C ALA 91 0 Y 1 A GLY 92 C GLY 92 0 Y 1 A ASN 93 C ASN 93 0 Y 1 B C1 NAG 1 WRONG HAND 1 A C1 NAG 482 WRONG HAND L L L 1 19.36 2.70 111.00 130.36 L L L N CA C ASP ASP ASP 14 14 14 N 1 L PHE 7 -132.03 -86.71 K 1 L ILE 14 -60.15 79.24 L 1 L ASP 14 42.85 161.96 1 H ARG 50 -140.57 -3.85 A 1 H TYR 60 -157.45 85.85 G 1 H ASN 60 -163.08 59.21 1 H HIS 71 -130.84 -61.06 1 H ASN 78 56.35 17.30 1 H ILE 79 -128.67 -54.89 A 1 H GLU 97 -109.71 -61.37 E 1 H VAL 147 -134.28 -52.70 1 H PHE 245 -142.86 -12.38 1 A VAL 82 -45.88 -177.49 1 A SER 83 -66.37 -88.05 1 A THR 85 -123.81 -80.74 1 A ASP 86 93.69 100.64 1 A ASP 88 176.99 -177.41 1 A VAL 89 -162.24 106.20 1 A SER 90 -51.18 175.64 1 A ALA 91 -110.48 -130.88 1 A ASN 93 -93.01 47.32 1 A ILE 94 -37.90 155.20 1 A LEU 95 -109.64 77.98 1 A ASN 261 39.92 61.21 1 A THR 431 -49.67 -90.13 1 A ALA 433 44.17 -126.14 1 A THR 434 90.49 67.55 1 A THR 435 15.89 130.60 1 A VAL 436 -94.71 55.70 1 A THR 437 -57.88 179.34 1 A THR 438 158.16 118.71 1 A VAL 439 -131.39 -135.61 1 A PHE 441 -30.91 119.75 55.0 4.20 6.15 0.00 3.02 0.00 -7.22 maximum likelihood target of CNS 0.211 0.205 2.20 29.44 983 84555 77077 1.3 91.2 random 1 anisotropic THROUGHOUT 0 0 MOLECULAR REPLACEMENT N-terminal half of native heparin cofactor II and native S195A thrombin Engh & Huber 0.32 0.29 5.00 0.37 0.33 2.20 29.44 208 6235 97 0 5930 1.406 0.0063 1.450 1.5 2.428 2.0 2.452 2.0 3.794 2.5 0.34 0.033 0.302 2.34 105 8541 60.8 51.20 2.2 30 1JMO 84555 77077 2 1.0 0.086 0.081 1 6.5 6.2 91.2 0.539 2.21 2.35 1.5 16159 0.434 1 2.2 62.5 data reduction MOSFLM data scaling SCALA phasing MOLREP refinement CNS 1.0 data scaling CCP4 (SCALA) Crystal Structure of the Heparin Cofactor II-S195A Thrombin Complex 1 N N 2 N N 3 N N 4 N N 5 N N 6 N N 6 N N 7 N N 7 N N 6 N N 6 N N 6 N N 8 N N 8 N N 8 N N L ASN 1 A ASN 11 HELX_P L GLY 1 A GLY 16 1 1 6 K F L PHE 7 A PHE 28 HELX_P L SER 11 A SER 32 5 2 5 L THR 14 A THR 37 HELX_P L TYR 14 A TYR 45 1 3 9 B J H ALA 55 B ALA 42 HELX_P H CYS 58 B CYS 45 5 4 4 H PRO 60 B PRO 49 HELX_P H ASP 60 B ASP 52 5 5 4 B E H THR 60 B THR 56 HELX_P H ASN 62 B ASN 58 5 6 3 I H ASP 125 B ASP 123 HELX_P H LEU 130 B LEU 131 1 7 9 H GLU 164 B GLU 170 HELX_P H THR 172 B THR 178 1 8 9 H LYS 185 B LYS 192 HELX_P H GLY 186 B GLY 196 5 9 5 C H LEU 234 B LEU 247 HELX_P H GLY 246 B GLY 259 1 10 13 A ASP 62 C ASP 62 HELX_P A GLU 69 C GLU 69 1 11 8 A SER 102 C SER 102 HELX_P A ASP 124 C ASP 124 1 12 23 A ALA 135 C ALA 135 HELX_P A SER 147 C SER 147 1 13 13 A LEU 148 C LEU 148 HELX_P A LEU 150 C LEU 150 5 14 3 A LYS 151 C LYS 151 HELX_P A LEU 162 C LEU 162 1 15 12 A HIS 163 C HIS 163 HELX_P A SER 171 C SER 171 1 16 9 A GLU 175 C GLU 175 HELX_P A ARG 192 C ARG 192 1 17 18 A LEU 214 C LEU 214 HELX_P A PHE 226 C PHE 226 1 18 13 A ASP 236 C ASP 236 HELX_P A THR 251 C THR 251 1 19 16 A PRO 285 C PRO 285 HELX_P A THR 289 C THR 289 5 20 5 A LYS 343 C LYS 343 HELX_P A SER 345 C SER 345 5 21 3 A GLY 346 C GLY 346 HELX_P A LEU 354 C LEU 354 1 22 9 A THR 355 C THR 355 HELX_P A MET 366 C MET 366 1 23 12 A LEU 386 C LEU 386 HELX_P A GLY 394 C GLY 394 1 24 9 A ARG 396 C ARG 396 HELX_P A ASP 400 C ASP 400 5 25 5 disulf 2.042 L CYS 1 A SG CYS 22 1_555 H CYS 122 B SG CYS 120 1_555 disulf 2.057 H CYS 42 B SG CYS 29 1_555 H CYS 58 B SG CYS 45 1_555 disulf 2.034 H CYS 168 B SG CYS 174 1_555 H CYS 182 B SG CYS 188 1_555 disulf 2.058 H CYS 191 B SG CYS 202 1_555 H CYS 220 B SG CYS 232 1_555 covale 1.454 one G N-Glycosylation H ASN 60 B ND2 ASN 54 1_555 B NAG 1 D C1 NAG 1_555 covale 1.330 both A ASP 59 C C ASP 59 1_555 A TYS 60 C N TYS 60 1_555 covale 1.323 both A TYS 60 C C TYS 60 1_555 A LEU 61 C N LEU 61 1_555 covale 1.328 both A ASP 72 C C ASP 72 1_555 A TYS 73 C N TYS 73 1_555 covale 1.327 both A TYS 73 C C TYS 73 1_555 A ILE 74 C N ILE 74 1_555 covale 1.448 one N-Glycosylation A ASN 169 C ND2 ASN 169 1_555 A NAG 481 H C1 NAG 1_555 covale 1.461 one N-Glycosylation A ASN 368 C ND2 ASN 368 1_555 A NAG 482 I C1 NAG 1_555 covale 1.398 both B NAG 1 D O4 NAG 1_555 B NAG 2 D C1 NAG 1_555 metalc 2.641 H LYS 224 B O LYS 237 1_555 H NA 501 E NA NA 1_555 metalc 2.863 H NA 501 E NA NA 1_555 H HOH 2048 N O HOH 1_555 BLOOD CLOTTING serpin, thrombin, protease, inhibition, inhibitor, BLOOD CLOTTING H SER 36 B SER 23 A 1 H PRO 37 B PRO 24 0.21 THRB_HUMAN UNP 1 315 P00734 TATSEYQTFFNPRTFGSGEADCGLRPLFEKKSLEDKTERELLESYIDG THRB_HUMAN UNP 2 363 P00734 RIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKIS MLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSV LQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGF YTHVFRLKKWIQKVIDQFGE HEP2_HUMAN UNP 3 20 P05546 GSKGPLDQLEKGGETAQSADPQWEQLNNKNLSMPLLPADFHKENTVTNDWIPEGEEDDDYLDLEKIFSEDDDYIDIVDSL SVSPTDSDVSAGNILQLFHGKSRIQRLNILNAKFAFNLYRVLKDQVNTFDNIFIAPVGISTAMGMISLGLKGETHEQVHS ILHFKDFVNASSKYEITTIHNLFRKLTHRLFRRNFGYTLRSVNDLYIQKQFPILLDFKTKVREYYFAEAQIADFSDPAFI SKTNNHIMKLTKGLIKDALENIDPATQMMILNCIYFKGSWVNKFPVEMTHNHNFRLNEREVVKVSMMQTKGNFLAANDQE LDCDILQLEYVGGISMLIVVPHKMSGMKTLEAQLTPRVVERWQKSMTNRTREVLLPKFKLEKNYNLVESLKLMGIRMLFD KNGNMAGISDQRIAIDLFKHQGTITVNEEGTQATTVTTVGFMPLSTQVRFTVDRPFLFLIYEHRTSCLLFMGRVANPSRS 315 362 1JMO 1 14 P00734 U M L 1 1 48 363 622 1JMO 15 247 P00734 H 2 1 260 20 499 1JMO 1 480 P05546 A 3 1 480 2 SER engineered mutation ALA 195 1JMO H P00734 UNP 568 206 3 TYR modified residue TYS 60 1JMO A P05546 UNP 79 60 3 TYR modified residue TYS 73 1JMO A P05546 UNP 92 73 7 4 7 4 8 5 5 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel parallel anti-parallel parallel anti-parallel parallel anti-parallel H MET 180 B MET 186 H ALA 183 B ALA 189 H GLY 226 B GLY 239 H HIS 230 B HIS 243 H TRP 207 B TRP 220 H GLU 217 B GLU 230 H PRO 198 B PRO 209 H LYS 202 B LYS 213 H LYS 135 B LYS 136 H GLY 140 B GLY 141 H GLN 156 B GLN 162 H PRO 161 B PRO 167 H SER 20 B SER 6 H ASP 21 B ASP 7 H MET 180 B MET 186 H ALA 183 B ALA 189 H GLY 226 B GLY 239 H HIS 230 B HIS 243 H TRP 207 B TRP 220 H GLU 217 B GLU 230 A PHE 441 C PHE 441 A PRO 443 C PRO 443 H GLN 30 B GLN 16 H ARG 35 B ARG 21 H GLU 39 B GLU 26 H LEU 46 B LEU 33 H TRP 51 B TRP 38 H THR 54 B THR 41 H ALA 104 B ALA 102 H LEU 108 B LEU 106 H LYS 81 B LYS 78 H ILE 90 B ILE 87 H LEU 64 B LEU 60 H ILE 68 B ILE 64 H GLN 30 B GLN 16 H ARG 35 B ARG 21 A ARG 449 C ARG 449 A THR 451 C THR 451 A THR 367 C THR 367 A PRO 376 C PRO 376 A VAL 301 C VAL 301 A ASP 318 C ASP 318 A HIS 290 C HIS 290 A ARG 295 C ARG 295 A ARG 449 C ARG 449 A THR 451 C THR 451 A THR 367 C THR 367 A PRO 376 C PRO 376 A VAL 301 C VAL 301 A ASP 318 C ASP 318 A CYS 323 C CYS 323 A TYR 330 C TYR 330 A ILE 334 C ILE 334 A PRO 341 C PRO 341 A PHE 456 C PHE 456 A GLU 462 C GLU 462 A CYS 467 C CYS 467 A VAL 474 C VAL 474 A ILE 132 C ILE 132 A ILE 134 C ILE 134 A ALA 229 C ALA 229 A ALA 232 C ALA 232 A THR 198 C THR 198 A GLN 208 C GLN 208 A MET 268 C MET 268 A LYS 277 C LYS 277 A ILE 415 C ILE 415 A VAL 426 C VAL 426 A PHE 378 C PHE 378 A GLU 381 C GLU 381 A ALA 229 C ALA 229 A ALA 232 C ALA 232 A THR 198 C THR 198 A GLN 208 C GLN 208 A MET 268 C MET 268 A LYS 277 C LYS 277 A ILE 415 C ILE 415 A VAL 426 C VAL 426 A TYR 384 C TYR 384 A ASN 385 C ASN 385 169 hexagonal P 61