0.027376 -0.000001 -0.000001 0.000000 0.011751 0.000000 0.000000 0.000000 0.011359 0.00000 0.00000 0.00000 Dumas, J.J. Merithew, E. Rajamani, D. Hayes, S. Lawe, D. Corvera, S. Lambright, D.G. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 36.528 85.096 88.036 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H14 O12 P2 340.116 PHOSPHORIC ACID MONO-(2,3,4,6-TETRAHYDROXY-5-PHOSPHONOOXY-CYCLOHEXYL) ESTER INOSITOL 1,3-BISPHOSPHATE non-polymer C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 S C N 184 N O N 185 N C N 186 N O N 187 R C N 188 N O N 189 S C N 190 N O N 191 N C N 192 N O N 193 R C N 194 N O N 195 N P N 196 N O N 197 N O N 198 N O N 199 N P N 200 N O N 201 N O N 202 N O N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N N N 218 S C N 219 N C N 220 N O N 221 N C N 222 N C N 223 N C N 224 N C N 225 N O N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N N N 240 S C N 241 N C N 242 N O N 243 N C N 244 N C N 245 N C N 246 N C N 247 N N N 248 N O N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N N N 265 S C N 266 N C N 267 N O N 268 N C N 269 N C N 270 N S N 271 N C N 272 N O N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N N N 285 S C N 286 N C N 287 N O N 288 N C Y 289 N C Y 290 N C Y 291 N C Y 292 N C Y 293 N C Y 294 N C N 295 N O N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N N N 308 S C N 309 N C N 310 N O N 311 N C N 312 N C N 313 N C N 314 N O N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N N N 325 S C N 326 N C N 327 N O N 328 N C N 329 N O N 330 N O N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N N N 339 S C N 340 N C N 341 N O N 342 R C N 343 N O N 344 N C N 345 N O N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N N N 356 S C N 357 N C N 358 N O N 359 N C Y 360 N C Y 361 N C Y 362 N C Y 363 N N Y 364 N C Y 365 N C Y 366 N C Y 367 N C Y 368 N C N 369 N O N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N N N 383 S C N 384 N C N 385 N O N 386 N C N 387 N C N 388 N C N 389 N O N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N ZN N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N doub N 200 N sing N 201 N sing N 202 N sing N 203 N doub N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N doub N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N doub N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N doub N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N doub N 278 N sing N 279 N sing N 280 N sing N 281 N sing Y 282 N doub Y 283 N sing Y 284 N sing N 285 N sing Y 286 N doub N 287 N sing Y 288 N doub N 289 N sing Y 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N doub N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N doub N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N doub N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N doub N 347 N sing N 348 N sing N 349 N sing N 350 N sing Y 351 N doub Y 352 N sing Y 353 N sing N 354 N sing Y 355 N doub Y 356 N sing Y 357 N sing N 358 N sing Y 359 N sing Y 360 N doub N 361 N sing Y 362 N doub N 363 N sing Y 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N doub N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing US Mol.Cell MOCEFL 2168 1097-2765 8 947 958 10.1016/S1097-2765(01)00385-9 11741531 Multivalent endosome targeting by homodimeric EEA1. 2001 10.2210/pdb1joc/pdb pdb_00001joc 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2001-03-20 BRANDEIS - B1 MAD M x-ray 1 1.28322 1.0 1.28356 1.0 1.23985 1.0 X12C NSLS 1.28322, 1.28356, 1.23985 SYNCHROTRON NSLS BEAMLINE X12C 14139.077 Early Endosomal Autoantigen 1 C-terminal domain, FYVE domain 2 man polymer 65.409 ZINC ION 4 syn non-polymer 340.116 PHOSPHORIC ACID MONO-(2,3,4,6-TETRAHYDROXY-5-PHOSPHONOOXY-CYCLOHEXYL) ESTER 2 syn non-polymer 18.015 water 56 nat water EEA1 no no NNQDERRALLERCLKGEGEIEKLQTKVLELQRKLDNTTAAVQELGRENQSLQIKHTQALNRKWAEDNEVQNCMACGKGFS VTVRRHHCRQCGNIFCAECSAKNALTPSSKKPVRVCDACFNDLQG NNQDERRALLERCLKGEGEIEKLQTKVLELQRKLDNTTAAVQELGRENQSLQIKHTQALNRKWAEDNEVQNCMACGKGFS VTVRRHHCRQCGNIFCAECSAKNALTPSSKKPVRVCDACFNDLQG A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia Escherichia coli sample 9606 Homo sapiens 469008 Escherichia coli BL21(DE3) BL21(DE3) plasmid pET15b 1 2.42 49.15 VAPOR DIFFUSION, HANGING DROP 7.0 11% PEG 4000, 50 mM HEPES, 60 mM ammonium acetate, 10% glycerol, and 1.5 mM Ins(1,3)P2, pH 7.0, VAPOR DIFFUSION, HANGING DROP chem_comp_atom chem_comp_bond database_2 pdbx_struct_conn_angle struct_conn struct_ref_seq_dif struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 2001-12-28 1 1 2008-04-27 1 2 2011-07-13 1 3 2024-02-07 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_seq_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2001-07-27 REL ZN ZINC ION ITP PHOSPHORIC ACID MONO-(2,3,4,6-TETRAHYDROXY-5-PHOSPHONOOXY-CYCLOHEXYL) ESTER HOH water ZN 300 2 ZN ZN 300 A ZN 301 2 ZN ZN 301 A IP2 101 3 ITP ITP 101 A ZN 302 2 ZN ZN 302 B ZN 303 2 ZN ZN 303 B IP2 101 3 ITP ITP 102 B TIP 402 4 HOH HOH 402 A TIP 403 4 HOH HOH 403 A TIP 404 4 HOH HOH 404 A TIP 405 4 HOH HOH 405 A TIP 406 4 HOH HOH 406 A TIP 407 4 HOH HOH 407 A TIP 409 4 HOH HOH 409 A TIP 410 4 HOH HOH 410 A TIP 411 4 HOH HOH 411 A TIP 412 4 HOH HOH 412 A TIP 415 4 HOH HOH 415 A TIP 416 4 HOH HOH 416 A TIP 417 4 HOH HOH 417 A TIP 420 4 HOH HOH 420 A TIP 421 4 HOH HOH 421 A TIP 425 4 HOH HOH 425 A TIP 426 4 HOH HOH 426 A TIP 427 4 HOH HOH 427 A TIP 428 4 HOH HOH 428 A TIP 429 4 HOH HOH 429 A TIP 430 4 HOH HOH 430 A TIP 431 4 HOH HOH 431 A TIP 432 4 HOH HOH 432 A TIP 433 4 HOH HOH 433 A TIP 440 4 HOH HOH 440 A TIP 441 4 HOH HOH 441 A TIP 442 4 HOH HOH 442 A TIP 443 4 HOH HOH 443 A TIP 445 4 HOH HOH 445 A TIP 447 4 HOH HOH 447 A TIP 448 4 HOH HOH 448 A TIP 449 4 HOH HOH 449 A TIP 450 4 HOH HOH 450 A TIP 451 4 HOH HOH 451 A TIP 452 4 HOH HOH 452 A TIP 453 4 HOH HOH 453 A TIP 456 4 HOH HOH 456 A TIP 401 4 HOH HOH 401 B TIP 408 4 HOH HOH 408 B TIP 413 4 HOH HOH 413 B TIP 414 4 HOH HOH 414 B TIP 418 4 HOH HOH 418 B TIP 419 4 HOH HOH 419 B TIP 422 4 HOH HOH 422 B TIP 423 4 HOH HOH 423 B TIP 424 4 HOH HOH 424 B TIP 434 4 HOH HOH 434 B TIP 435 4 HOH HOH 435 B TIP 436 4 HOH HOH 436 B TIP 437 4 HOH HOH 437 B TIP 438 4 HOH HOH 438 B TIP 439 4 HOH HOH 439 B TIP 444 4 HOH HOH 444 B TIP 446 4 HOH HOH 446 B TIP 454 4 HOH HOH 454 B TIP 455 4 HOH HOH 455 B n 1 1287 A n 2 1288 A GLN 1289 n 3 GLN 1289 A ASP 1290 n 4 ASP 1290 A GLU 1291 n 5 GLU 1291 A ARG 1292 n 6 ARG 1292 A ARG 1293 n 7 ARG 1293 A ALA 1294 n 8 ALA 1294 A LEU 1295 n 9 LEU 1295 A LEU 1296 n 10 LEU 1296 A GLU 1297 n 11 GLU 1297 A ARG 1298 n 12 ARG 1298 A CYS 1299 n 13 CYS 1299 A LEU 1300 n 14 LEU 1300 A LYS 1301 n 15 LYS 1301 A GLY 1302 n 16 GLY 1302 A GLU 1303 n 17 GLU 1303 A GLY 1304 n 18 GLY 1304 A GLU 1305 n 19 GLU 1305 A ILE 1306 n 20 ILE 1306 A ALA 1307 n 21 GLU 1307 A LYS 1308 n 22 LYS 1308 A LEU 1309 n 23 LEU 1309 A GLN 1310 n 24 GLN 1310 A THR 1311 n 25 THR 1311 A LYS 1312 n 26 LYS 1312 A VAL 1313 n 27 VAL 1313 A ALA 1314 n 28 LEU 1314 A GLU 1315 n 29 GLU 1315 A LEU 1316 n 30 LEU 1316 A GLN 1317 n 31 GLN 1317 A ARG 1318 n 32 ARG 1318 A LYS 1319 n 33 LYS 1319 A LEU 1320 n 34 LEU 1320 A ASP 1321 n 35 ASP 1321 A ASN 1322 n 36 ASN 1322 A THR 1323 n 37 THR 1323 A THR 1324 n 38 THR 1324 A ALA 1325 n 39 ALA 1325 A ALA 1326 n 40 ALA 1326 A VAL 1327 n 41 VAL 1327 A GLN 1328 n 42 GLN 1328 A GLU 1329 n 43 GLU 1329 A LEU 1330 n 44 LEU 1330 A GLY 1331 n 45 GLY 1331 A ARG 1332 n 46 ARG 1332 A GLU 1333 n 47 GLU 1333 A ASN 1334 n 48 ASN 1334 A GLN 1335 n 49 GLN 1335 A SER 1336 n 50 SER 1336 A LEU 1337 n 51 LEU 1337 A GLN 1338 n 52 GLN 1338 A ILE 1339 n 53 ILE 1339 A LYS 1340 n 54 LYS 1340 A HIS 1341 n 55 HIS 1341 A THR 1342 n 56 THR 1342 A GLN 1343 n 57 GLN 1343 A ALA 1344 n 58 ALA 1344 A LEU 1345 n 59 LEU 1345 A ASN 1346 n 60 ASN 1346 A ARG 1347 n 61 ARG 1347 A LYS 1348 n 62 LYS 1348 A TRP 1349 n 63 TRP 1349 A ALA 1350 n 64 ALA 1350 A GLU 1351 n 65 GLU 1351 A ASP 1352 n 66 ASP 1352 A ASN 1353 n 67 ASN 1353 A GLU 1354 n 68 GLU 1354 A VAL 1355 n 69 VAL 1355 A GLN 1356 n 70 GLN 1356 A ASN 1357 n 71 ASN 1357 A CYS 1358 n 72 CYS 1358 A MET 1359 n 73 MET 1359 A ALA 1360 n 74 ALA 1360 A CYS 1361 n 75 CYS 1361 A GLY 1362 n 76 GLY 1362 A LYS 1363 n 77 LYS 1363 A GLY 1364 n 78 GLY 1364 A PHE 1365 n 79 PHE 1365 A SER 1366 n 80 SER 1366 A VAL 1367 n 81 VAL 1367 A THR 1368 n 82 THR 1368 A VAL 1369 n 83 VAL 1369 A ARG 1370 n 84 ARG 1370 A ARG 1371 n 85 ARG 1371 A HIS 1372 n 86 HIS 1372 A HIS 1373 n 87 HIS 1373 A CYS 1374 n 88 CYS 1374 A ARG 1375 n 89 ARG 1375 A GLN 1376 n 90 GLN 1376 A CYS 1377 n 91 CYS 1377 A GLY 1378 n 92 GLY 1378 A ASN 1379 n 93 ASN 1379 A ILE 1380 n 94 ILE 1380 A PHE 1381 n 95 PHE 1381 A CYS 1382 n 96 CYS 1382 A ALA 1383 n 97 ALA 1383 A GLU 1384 n 98 GLU 1384 A CYS 1385 n 99 CYS 1385 A SER 1386 n 100 SER 1386 A ALA 1387 n 101 ALA 1387 A LYS 1388 n 102 LYS 1388 A ASN 1389 n 103 ASN 1389 A ALA 1390 n 104 ALA 1390 A LEU 1391 n 105 LEU 1391 A THR 1392 n 106 THR 1392 A PRO 1393 n 107 PRO 1393 A SER 1394 n 108 SER 1394 A SER 1395 n 109 SER 1395 A LYS 1396 n 110 LYS 1396 A LYS 1397 n 111 LYS 1397 A PRO 1398 n 112 PRO 1398 A VAL 1399 n 113 VAL 1399 A ARG 1400 n 114 ARG 1400 A VAL 1401 n 115 VAL 1401 A CYS 1402 n 116 CYS 1402 A ASP 1403 n 117 ASP 1403 A ALA 1404 n 118 ALA 1404 A CYS 1405 n 119 CYS 1405 A PHE 1406 n 120 PHE 1406 A ASN 1407 n 121 ASN 1407 A ASP 1408 n 122 ASP 1408 A LEU 1409 n 123 LEU 1409 A GLN 1410 n 124 GLN 1410 A GLY 1411 n 125 GLY 1411 A n 1 1287 B n 2 1288 B GLN 1289 n 3 GLN 1289 B ASP 1290 n 4 ASP 1290 B GLU 1291 n 5 GLU 1291 B ARG 1292 n 6 ARG 1292 B ARG 1293 n 7 ARG 1293 B ALA 1294 n 8 ALA 1294 B LEU 1295 n 9 LEU 1295 B LEU 1296 n 10 LEU 1296 B GLU 1297 n 11 GLU 1297 B ARG 1298 n 12 ARG 1298 B CYS 1299 n 13 CYS 1299 B LEU 1300 n 14 LEU 1300 B LYS 1301 n 15 LYS 1301 B GLY 1302 n 16 GLY 1302 B GLU 1303 n 17 GLU 1303 B GLY 1304 n 18 GLY 1304 B GLU 1305 n 19 GLU 1305 B ILE 1306 n 20 ILE 1306 B GLU 1307 n 21 GLU 1307 B LYS 1308 n 22 LYS 1308 B LEU 1309 n 23 LEU 1309 B GLN 1310 n 24 GLN 1310 B THR 1311 n 25 THR 1311 B LYS 1312 n 26 LYS 1312 B VAL 1313 n 27 VAL 1313 B LEU 1314 n 28 LEU 1314 B GLU 1315 n 29 GLU 1315 B LEU 1316 n 30 LEU 1316 B GLN 1317 n 31 GLN 1317 B ARG 1318 n 32 ARG 1318 B LYS 1319 n 33 LYS 1319 B LEU 1320 n 34 LEU 1320 B ASP 1321 n 35 ASP 1321 B ASN 1322 n 36 ASN 1322 B THR 1323 n 37 THR 1323 B THR 1324 n 38 THR 1324 B ALA 1325 n 39 ALA 1325 B ALA 1326 n 40 ALA 1326 B VAL 1327 n 41 VAL 1327 B GLN 1328 n 42 GLN 1328 B GLU 1329 n 43 GLU 1329 B LEU 1330 n 44 LEU 1330 B GLY 1331 n 45 GLY 1331 B ARG 1332 n 46 ARG 1332 B GLU 1333 n 47 GLU 1333 B ASN 1334 n 48 ASN 1334 B GLN 1335 n 49 GLN 1335 B SER 1336 n 50 SER 1336 B LEU 1337 n 51 LEU 1337 B GLN 1338 n 52 GLN 1338 B ILE 1339 n 53 ILE 1339 B LYS 1340 n 54 LYS 1340 B HIS 1341 n 55 HIS 1341 B THR 1342 n 56 THR 1342 B GLN 1343 n 57 GLN 1343 B ALA 1344 n 58 ALA 1344 B LEU 1345 n 59 LEU 1345 B ASN 1346 n 60 ASN 1346 B ARG 1347 n 61 ARG 1347 B LYS 1348 n 62 LYS 1348 B TRP 1349 n 63 TRP 1349 B ALA 1350 n 64 ALA 1350 B GLU 1351 n 65 GLU 1351 B ASP 1352 n 66 ASP 1352 B ASN 1353 n 67 ASN 1353 B GLU 1354 n 68 GLU 1354 B VAL 1355 n 69 VAL 1355 B GLN 1356 n 70 GLN 1356 B ASN 1357 n 71 ASN 1357 B CYS 1358 n 72 CYS 1358 B MET 1359 n 73 MET 1359 B ALA 1360 n 74 ALA 1360 B CYS 1361 n 75 CYS 1361 B GLY 1362 n 76 GLY 1362 B LYS 1363 n 77 LYS 1363 B GLY 1364 n 78 GLY 1364 B PHE 1365 n 79 PHE 1365 B SER 1366 n 80 SER 1366 B VAL 1367 n 81 VAL 1367 B THR 1368 n 82 THR 1368 B VAL 1369 n 83 VAL 1369 B ARG 1370 n 84 ARG 1370 B ARG 1371 n 85 ARG 1371 B HIS 1372 n 86 HIS 1372 B HIS 1373 n 87 HIS 1373 B CYS 1374 n 88 CYS 1374 B ARG 1375 n 89 ARG 1375 B GLN 1376 n 90 GLN 1376 B CYS 1377 n 91 CYS 1377 B GLY 1378 n 92 GLY 1378 B ASN 1379 n 93 ASN 1379 B ILE 1380 n 94 ILE 1380 B PHE 1381 n 95 PHE 1381 B CYS 1382 n 96 CYS 1382 B ALA 1383 n 97 ALA 1383 B GLU 1384 n 98 GLU 1384 B CYS 1385 n 99 CYS 1385 B SER 1386 n 100 SER 1386 B ALA 1387 n 101 ALA 1387 B LYS 1388 n 102 LYS 1388 B ASN 1389 n 103 ASN 1389 B ALA 1390 n 104 ALA 1390 B LEU 1391 n 105 LEU 1391 B THR 1392 n 106 THR 1392 B PRO 1393 n 107 PRO 1393 B SER 1394 n 108 SER 1394 B SER 1395 n 109 SER 1395 B LYS 1396 n 110 LYS 1396 B LYS 1397 n 111 LYS 1397 B PRO 1398 n 112 PRO 1398 B VAL 1399 n 113 VAL 1399 B ARG 1400 n 114 ARG 1400 B VAL 1401 n 115 VAL 1401 B CYS 1402 n 116 CYS 1402 B ASP 1403 n 117 ASP 1403 B ALA 1404 n 118 ALA 1404 B CYS 1405 n 119 CYS 1405 B PHE 1406 n 120 PHE 1406 B ASN 1407 n 121 ASN 1407 B ASP 1408 n 122 ASP 1408 B LEU 1409 n 123 LEU 1409 B GLN 1410 n 124 GLN 1410 B GLY 1411 n 125 GLY 1411 B author_and_software_defined_assembly PISA 2 dimeric 4960 -31 15820 A CYS 1374 A SG CYS 88 1_555 A ZN 300 C ZN ZN 1_555 A CYS 1377 A SG CYS 91 1_555 104.0 A CYS 1374 A SG CYS 88 1_555 A ZN 300 C ZN ZN 1_555 A CYS 1402 A SG CYS 116 1_555 114.7 A CYS 1377 A SG CYS 91 1_555 A ZN 300 C ZN ZN 1_555 A CYS 1402 A SG CYS 116 1_555 120.2 A CYS 1374 A SG CYS 88 1_555 A ZN 300 C ZN ZN 1_555 A CYS 1405 A SG CYS 119 1_555 105.3 A CYS 1377 A SG CYS 91 1_555 A ZN 300 C ZN ZN 1_555 A CYS 1405 A SG CYS 119 1_555 106.1 A CYS 1402 A SG CYS 116 1_555 A ZN 300 C ZN ZN 1_555 A CYS 1405 A SG CYS 119 1_555 105.4 A CYS 1358 A SG CYS 72 1_555 A ZN 301 D ZN ZN 1_555 A CYS 1361 A SG CYS 75 1_555 109.8 A CYS 1358 A SG CYS 72 1_555 A ZN 301 D ZN ZN 1_555 A CYS 1382 A SG CYS 96 1_555 112.0 A CYS 1361 A SG CYS 75 1_555 A ZN 301 D ZN ZN 1_555 A CYS 1382 A SG CYS 96 1_555 116.7 A CYS 1358 A SG CYS 72 1_555 A ZN 301 D ZN ZN 1_555 A CYS 1385 A SG CYS 99 1_555 102.2 A CYS 1361 A SG CYS 75 1_555 A ZN 301 D ZN ZN 1_555 A CYS 1385 A SG CYS 99 1_555 108.9 A CYS 1382 A SG CYS 96 1_555 A ZN 301 D ZN ZN 1_555 A CYS 1385 A SG CYS 99 1_555 106.0 B CYS 1374 B SG CYS 88 1_555 B ZN 302 F ZN ZN 1_555 B CYS 1377 B SG CYS 91 1_555 101.5 B CYS 1374 B SG CYS 88 1_555 B ZN 302 F ZN ZN 1_555 B CYS 1402 B SG CYS 116 1_555 108.1 B CYS 1377 B SG CYS 91 1_555 B ZN 302 F ZN ZN 1_555 B CYS 1402 B SG CYS 116 1_555 125.9 B CYS 1374 B SG CYS 88 1_555 B ZN 302 F ZN ZN 1_555 B CYS 1405 B SG CYS 119 1_555 111.8 B CYS 1377 B SG CYS 91 1_555 B ZN 302 F ZN ZN 1_555 B CYS 1405 B SG CYS 119 1_555 109.0 B CYS 1402 B SG CYS 116 1_555 B ZN 302 F ZN ZN 1_555 B CYS 1405 B SG CYS 119 1_555 100.7 B CYS 1358 B SG CYS 72 1_555 B ZN 303 G ZN ZN 1_555 B CYS 1361 B SG CYS 75 1_555 111.4 B CYS 1358 B SG CYS 72 1_555 B ZN 303 G ZN ZN 1_555 B CYS 1382 B SG CYS 96 1_555 112.8 B CYS 1361 B SG CYS 75 1_555 B ZN 303 G ZN ZN 1_555 B CYS 1382 B SG CYS 96 1_555 114.2 B CYS 1358 B SG CYS 72 1_555 B ZN 303 G ZN ZN 1_555 B CYS 1385 B SG CYS 99 1_555 109.4 B CYS 1361 B SG CYS 75 1_555 B ZN 303 G ZN ZN 1_555 B CYS 1385 B SG CYS 99 1_555 102.2 B CYS 1382 B SG CYS 96 1_555 B ZN 303 G ZN ZN 1_555 B CYS 1385 B SG CYS 99 1_555 106.1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O HIS 1372 A O HIS 86 A N PHE 1381 A N PHE 95 A N ALA 1390 A N ALA 104 A O VAL 1399 A O VAL 113 B O HIS 1372 B O HIS 86 B N PHE 1381 B N PHE 95 B O ALA 1390 B O ALA 104 B N VAL 1399 B N VAL 113 1 A CG GLU 1307 A CG GLU 21 1 Y 1 A CD GLU 1307 A CD GLU 21 1 Y 1 A OE1 GLU 1307 A OE1 GLU 21 1 Y 1 A OE2 GLU 1307 A OE2 GLU 21 1 Y 1 A CG LEU 1314 A CG LEU 28 1 Y 1 A CD1 LEU 1314 A CD1 LEU 28 1 Y 1 A CD2 LEU 1314 A CD2 LEU 28 1 Y 1 A ASN 1287 A ASN 1 1 Y 1 A ASN 1288 A ASN 2 1 Y 1 B ASN 1287 B ASN 1 1 Y 1 B ASN 1288 B ASN 2 1 Y 1 B B OE2 CE GLU LYS 1297 1301 1.97 1 3.70 0.50 120.30 124.00 A A A NE CZ NH2 ARG ARG ARG 1293 1293 1293 N 1 3.65 0.50 120.30 123.95 B B B NE CZ NH2 ARG ARG ARG 1292 1292 1292 N 1 3.62 0.50 120.30 123.92 B B B NE CZ NH2 ARG ARG ARG 1293 1293 1293 N 1 A ARG 1347 -28.54 127.33 1 A MET 1359 -63.69 0.32 1 A SER 1366 -164.07 -156.67 1 A SER 1386 -155.66 46.19 1 A LEU 1409 -60.27 0.48 1 A GLN 1410 73.06 -0.73 1 B LEU 1345 -79.58 22.59 1 B MET 1359 -55.32 0.14 1 B SER 1386 -151.44 38.75 1 B LEU 1409 -86.66 41.76 Residues 1287 and 1288 were missing from the electron density. 0.2810000 0.2210000 2.2 20 1 MAD Engh & Huber 2.2 20 56 2038 44 0 1938 0.006 1.1 phasing SHARP refinement X-PLOR 3.1 data reduction DENZO data scaling SCALEPACK EEA1 homodimer of C-terminal FYVE domain bound to inositol 1,3-diphosphate 1 N N 1 N N 2 N N 2 N N 3 N N 2 N N 2 N N 3 N N 4 N N 4 N N A GLN 1289 A GLN 3 HELX_P A ARG 1347 A ARG 61 1 1 59 A GLU 1351 A GLU 65 HELX_P A VAL 1355 A VAL 69 5 2 5 A CYS 1382 A CYS 96 HELX_P A SER 1386 A SER 100 5 3 5 A CYS 1402 A CYS 116 HELX_P A LEU 1409 A LEU 123 1 4 8 B GLU 1351 B GLU 65 HELX_P B VAL 1355 B VAL 69 5 6 5 B CYS 1382 B CYS 96 HELX_P B SER 1386 B SER 100 5 7 5 B CYS 1402 B CYS 116 HELX_P B LEU 1409 B LEU 123 1 8 8 metalc 2.411 A ZN 300 C ZN ZN 1_555 A CYS 1374 A SG CYS 88 1_555 metalc 2.244 A ZN 300 C ZN ZN 1_555 A CYS 1377 A SG CYS 91 1_555 metalc 2.247 A ZN 300 C ZN ZN 1_555 A CYS 1402 A SG CYS 116 1_555 metalc 2.249 A ZN 300 C ZN ZN 1_555 A CYS 1405 A SG CYS 119 1_555 metalc 2.338 A ZN 301 D ZN ZN 1_555 A CYS 1358 A SG CYS 72 1_555 metalc 2.422 A ZN 301 D ZN ZN 1_555 A CYS 1361 A SG CYS 75 1_555 metalc 2.286 A ZN 301 D ZN ZN 1_555 A CYS 1382 A SG CYS 96 1_555 metalc 2.345 A ZN 301 D ZN ZN 1_555 A CYS 1385 A SG CYS 99 1_555 metalc 2.331 B ZN 302 F ZN ZN 1_555 B CYS 1374 B SG CYS 88 1_555 metalc 2.138 B ZN 302 F ZN ZN 1_555 B CYS 1377 B SG CYS 91 1_555 metalc 2.283 B ZN 302 F ZN ZN 1_555 B CYS 1402 B SG CYS 116 1_555 metalc 2.362 B ZN 302 F ZN ZN 1_555 B CYS 1405 B SG CYS 119 1_555 metalc 2.257 B ZN 303 G ZN ZN 1_555 B CYS 1358 B SG CYS 72 1_555 metalc 2.223 B ZN 303 G ZN ZN 1_555 B CYS 1361 B SG CYS 75 1_555 metalc 2.378 B ZN 303 G ZN ZN 1_555 B CYS 1382 B SG CYS 96 1_555 metalc 2.407 B ZN 303 G ZN ZN 1_555 B CYS 1385 B SG CYS 99 1_555 MEMBRANE PROTEIN FYVE domain, inositol 3-phosphate binding, MEMBRANE PROTEIN EEA1_HUMAN UNP 1 1287 Q15075 NNQDERRALLERCLKGEGEIEKLQTKVLELQRKLDNTTAVQELGRENQSLQIKHTQALNRKWAEDNEVQNCMACGKGFSV TVRRHHCRQCGNIFCAECSAKNALTPSSKKPVRVCDACFNDLQG 1287 1410 1JOC 1287 1411 Q15075 A 1 1 125 1287 1410 1JOC 1287 1411 Q15075 B 1 1 125 1 insertion ALA 1325 1JOC A Q15075 UNP 39 2 insertion ALA 1325 1JOC B Q15075 UNP 39 2 2 2 2 anti-parallel anti-parallel anti-parallel anti-parallel A HIS 1372 A HIS 86 A HIS 1373 A HIS 87 A ILE 1380 A ILE 94 A PHE 1381 A PHE 95 A LYS 1388 A LYS 102 A ALA 1390 A ALA 104 A VAL 1399 A VAL 113 A VAL 1401 A VAL 115 B HIS 1372 B HIS 86 B HIS 1373 B HIS 87 B ILE 1380 B ILE 94 B PHE 1381 B PHE 95 B LYS 1388 B LYS 102 B ALA 1390 B ALA 104 B VAL 1399 B VAL 113 B VAL 1401 B VAL 115 BINDING SITE FOR RESIDUE ZN A 300 A ZN 300 Software 4 BINDING SITE FOR RESIDUE ZN A 301 A ZN 301 Software 4 BINDING SITE FOR RESIDUE ZN B 302 B ZN 302 Software 4 BINDING SITE FOR RESIDUE ZN B 303 B ZN 303 Software 4 BINDING SITE FOR RESIDUE ITP A 101 A ITP 101 Software 10 BINDING SITE FOR RESIDUE ITP B 102 B ITP 102 Software 7 A CYS 1374 A CYS 88 4 1_555 A CYS 1377 A CYS 91 4 1_555 A CYS 1402 A CYS 116 4 1_555 A CYS 1405 A CYS 119 4 1_555 A CYS 1358 A CYS 72 4 1_555 A CYS 1361 A CYS 75 4 1_555 A CYS 1382 A CYS 96 4 1_555 A CYS 1385 A CYS 99 4 1_555 B CYS 1374 B CYS 88 4 1_555 B CYS 1377 B CYS 91 4 1_555 B CYS 1402 B CYS 116 4 1_555 B CYS 1405 B CYS 119 4 1_555 B CYS 1358 B CYS 72 4 1_555 B CYS 1361 B CYS 75 4 1_555 B CYS 1382 B CYS 96 4 1_555 B CYS 1385 B CYS 99 4 1_555 A HOH 427 I HOH 10 1_555 A HOH 450 I HOH 10 1_555 A HOH 451 I HOH 10 1_555 A HOH 452 I HOH 10 1_555 A ASP 1352 A ASP 66 10 1_555 A ARG 1370 A ARG 84 10 1_555 A ARG 1371 A ARG 85 10 1_555 A HIS 1372 A HIS 86 10 1_555 A HIS 1373 A HIS 87 10 1_555 A ARG 1375 A ARG 89 10 1_555 B HOH 423 J HOH 7 1_555 B ASP 1352 B ASP 66 7 1_555 B ARG 1370 B ARG 84 7 1_555 B ARG 1371 B ARG 85 7 1_555 B HIS 1372 B HIS 86 7 1_555 B HIS 1373 B HIS 87 7 1_555 B ARG 1375 B ARG 89 7 1_555 19 P 21 21 21