0.006015 0.003473 0.000000 0.000000 0.006946 0.000000 0.000000 0.000000 0.012425 0.00000 0.00000 0.00000 Olsen, J.G. Kadziola, A. Lauritzen, C. Pedersen, J. Larsen, S. Dahl, S.W. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 90.00 120.00 166.240 166.240 80.480 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Cl -1 35.453 CHLORIDE ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C8 H15 N O6 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose D-saccharide, beta linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking NE FEBS LETT. FEBLAL 0165 0014-5793 506 201 206 10.1016/S0014-5793(01)02911-8 11602245 Tetrameric dipeptidyl peptidase I directs substrate specificity by use of the residual pro-part domain 2001 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 IMAGE PLATE 1998-04-20 MARRESEARCH Si 111 CHANNEL SINGLE WAVELENGTH M x-ray 1 1.0 1.0 I711 MAX II 1.0 SYNCHROTRON MAX II BEAMLINE I711 49866.277 dipeptidyl peptidase I 3.4.14.1 1 man polymer 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose 2 syn non-polymer 35.453 CHLORIDE ION 1 syn non-polymer 96.063 SULFATE ION 1 syn non-polymer 18.015 water 83 nat water cathepsin C no no DTPANCTYPDLLGTWVFQVGPRHPRSHINCSVMEPTEEKVVIHLKKLDTAYDEVGNSGYFTLIYNQGFEIVLNDYKWFAF FKYEVKGSRAISYCHETMTGWVHDVLGRNWACFVGKKMANHSEKVYVNVAHLGGLQEKYSERLYSHHHNFVKAINSVQKS WTATTYRRYEKLSIRDLIRRSGHSGRILRPKPAPITDEIQQQILSLPESWDWRNVRGINFVSPVRNQESCGSCYSFASLG MLEARIRILTNNSQTPILSPQEVVSCSPYAQGCDGGFPYLIAGKYAQDFGVVEENCFPYTATDAPCKPKENCLRYYSSEY YYVGGFYGGCNEALMKLELVKHGPMAVAFEVHDDFLHYHSGIYHHTGLSDPFNPFELTNHAVLLVGYGKDPVTGLDYWIV KNSWGSQWGESGYFRIRRGTDECAIESIAMAAIPIPKL DTPANCTYPDLLGTWVFQVGPRHPRSHINCSVMEPTEEKVVIHLKKLDTAYDEVGNSGYFTLIYNQGFEIVLNDYKWFAF FKYEVKGSRAISYCHETMTGWVHDVLGRNWACFVGKKMANHSEKVYVNVAHLGGLQEKYSERLYSHHHNFVKAINSVQKS WTATTYRRYEKLSIRDLIRRSGHSGRILRPKPAPITDEIQQQILSLPESWDWRNVRGINFVSPVRNQESCGSCYSFASLG MLEARIRILTNNSQTPILSPQEVVSCSPYAQGCDGGFPYLIAGKYAQDFGVVEENCFPYTATDAPCKPKENCLRYYSSEY YYVGGFYGGCNEALMKLELVKHGPMAVAFEVHDDFLHYHSGIYHHTGLSDPFNPFELTNHAVLLVGYGKDPVTGLDYWIV KNSWGSQWGESGYFRIRRGTDECAIESIAMAAIPIPKL A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Norway rat Rattus fall armyworm Spodoptera sample 10116 Rattus norvegicus 7108 Spodoptera frugiperda bacculo virus 1 3.22 61.77 VAPOR DIFFUSION, HANGING DROP 7.5 bis-tris, NaCl, dithiothreitol, EDTA, bis-tris propane, ammonium sulfate, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K 298 diffrn_source exptl_crystal_grow chem_comp entity pdbx_chem_comp_identifier pdbx_entity_nonpoly struct_conn struct_ref_seq_dif struct_site struct_site_gen repository Initial release Carbohydrate remediation repository Remediation Version format compliance Derived calculations Version format compliance Data collection Experimental preparation Data collection Database references Derived calculations Structure summary 1 0 2002-10-18 1 1 2008-04-27 1 2 2011-07-13 1 3 2018-02-14 1 4 2020-07-29 _diffrn_source.pdbx_synchrotron_site _exptl_crystal_grow.pdbx_details _exptl_crystal_grow.temp _chem_comp.name _chem_comp.type _entity.pdbx_description _pdbx_entity_nonpoly.name _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_role _struct_ref_seq_dif.details DGlcpNAcb N-acetyl-b-D-glucopyranosamine b-D-GlcpNAc GlcNAc RCSB Y PDBJ 2001-08-08 REL REL NAG 2-acetamido-2-deoxy-beta-D-glucopyranose CL CHLORIDE ION SO4 SULFATE ION HOH water NAG 501 2 NAG NAG 501 A NAG 502 2 NAG NAG 502 A CL 503 3 CL CL 503 A SO4 504 4 SO4 SO4 504 A HOH 601 5 HOH HOH 601 A HOH 602 5 HOH HOH 602 A HOH 603 5 HOH HOH 603 A HOH 604 5 HOH HOH 604 A HOH 605 5 HOH HOH 605 A HOH 606 5 HOH HOH 606 A HOH 607 5 HOH HOH 607 A HOH 608 5 HOH HOH 608 A HOH 609 5 HOH HOH 609 A HOH 610 5 HOH HOH 610 A HOH 611 5 HOH HOH 611 A HOH 612 5 HOH HOH 612 A HOH 613 5 HOH HOH 613 A HOH 614 5 HOH HOH 614 A HOH 615 5 HOH HOH 615 A HOH 616 5 HOH HOH 616 A HOH 617 5 HOH HOH 617 A HOH 618 5 HOH HOH 618 A HOH 619 5 HOH HOH 619 A HOH 620 5 HOH HOH 620 A HOH 621 5 HOH HOH 621 A HOH 622 5 HOH HOH 622 A HOH 623 5 HOH HOH 623 A HOH 624 5 HOH HOH 624 A HOH 625 5 HOH HOH 625 A HOH 626 5 HOH HOH 626 A HOH 627 5 HOH HOH 627 A HOH 628 5 HOH HOH 628 A HOH 629 5 HOH HOH 629 A HOH 630 5 HOH HOH 630 A HOH 631 5 HOH HOH 631 A HOH 632 5 HOH HOH 632 A HOH 633 5 HOH HOH 633 A HOH 634 5 HOH HOH 634 A HOH 635 5 HOH HOH 635 A HOH 636 5 HOH HOH 636 A HOH 637 5 HOH HOH 637 A HOH 638 5 HOH HOH 638 A HOH 639 5 HOH HOH 639 A HOH 640 5 HOH HOH 640 A HOH 641 5 HOH HOH 641 A HOH 642 5 HOH HOH 642 A HOH 643 5 HOH HOH 643 A HOH 644 5 HOH HOH 644 A HOH 645 5 HOH HOH 645 A HOH 646 5 HOH HOH 646 A HOH 647 5 HOH HOH 647 A HOH 648 5 HOH HOH 648 A HOH 649 5 HOH HOH 649 A HOH 650 5 HOH HOH 650 A HOH 651 5 HOH HOH 651 A HOH 652 5 HOH HOH 652 A HOH 653 5 HOH HOH 653 A HOH 654 5 HOH HOH 654 A HOH 655 5 HOH HOH 655 A HOH 656 5 HOH HOH 656 A HOH 657 5 HOH HOH 657 A HOH 658 5 HOH HOH 658 A HOH 659 5 HOH HOH 659 A HOH 660 5 HOH HOH 660 A HOH 661 5 HOH HOH 661 A HOH 662 5 HOH HOH 662 A HOH 663 5 HOH HOH 663 A HOH 664 5 HOH HOH 664 A HOH 665 5 HOH HOH 665 A HOH 666 5 HOH HOH 666 A HOH 667 5 HOH HOH 667 A HOH 668 5 HOH HOH 668 A HOH 669 5 HOH HOH 669 A HOH 670 5 HOH HOH 670 A HOH 671 5 HOH HOH 671 A HOH 672 5 HOH HOH 672 A HOH 673 5 HOH HOH 673 A HOH 674 5 HOH HOH 674 A HOH 675 5 HOH HOH 675 A HOH 676 5 HOH HOH 676 A HOH 677 5 HOH HOH 677 A HOH 678 5 HOH HOH 678 A HOH 679 5 HOH HOH 679 A HOH 680 5 HOH HOH 680 A HOH 681 5 HOH HOH 681 A HOH 682 5 HOH HOH 682 A HOH 683 5 HOH HOH 683 A ASP 1 n 1 ASP 1 A THR 2 n 2 THR 2 A PRO 3 n 3 PRO 3 A ALA 4 n 4 ALA 4 A ASN 5 n 5 ASN 5 A CYS 6 n 6 CYS 6 A THR 7 n 7 THR 7 A TYR 8 n 8 TYR 8 A PRO 9 n 9 PRO 9 A ASP 10 n 10 ASP 10 A LEU 11 n 11 LEU 11 A LEU 12 n 12 LEU 12 A GLY 13 n 13 GLY 13 A THR 14 n 14 THR 14 A TRP 15 n 15 TRP 15 A VAL 16 n 16 VAL 16 A PHE 17 n 17 PHE 17 A GLN 18 n 18 GLN 18 A VAL 19 n 19 VAL 19 A GLY 20 n 20 GLY 20 A PRO 21 n 21 PRO 21 A ARG 22 n 22 ARG 22 A HIS 23 n 23 HIS 23 A PRO 24 n 24 PRO 24 A ARG 25 n 25 ARG 25 A SER 26 n 26 SER 26 A HIS 27 n 27 HIS 27 A ILE 28 n 28 ILE 28 A ASN 29 n 29 ASN 29 A CYS 30 n 30 CYS 30 A SER 31 n 31 SER 31 A VAL 32 n 32 VAL 32 A MET 33 n 33 MET 33 A GLU 34 n 34 GLU 34 A PRO 35 n 35 PRO 35 A THR 36 n 36 THR 36 A GLU 37 n 37 GLU 37 A GLU 38 n 38 GLU 38 A LYS 39 n 39 LYS 39 A VAL 40 n 40 VAL 40 A VAL 41 n 41 VAL 41 A ILE 42 n 42 ILE 42 A HIS 43 n 43 HIS 43 A LEU 44 n 44 LEU 44 A LYS 45 n 45 LYS 45 A LYS 46 n 46 LYS 46 A LEU 47 n 47 LEU 47 A ASP 48 n 48 ASP 48 A THR 49 n 49 THR 49 A ALA 50 n 50 ALA 50 A TYR 51 n 51 TYR 51 A ASP 52 n 52 ASP 52 A GLU 53 n 53 GLU 53 A VAL 54 n 54 VAL 54 A GLY 55 n 55 GLY 55 A ASN 56 n 56 ASN 56 A SER 57 n 57 SER 57 A GLY 58 n 58 GLY 58 A TYR 59 n 59 TYR 59 A PHE 60 n 60 PHE 60 A THR 61 n 61 THR 61 A LEU 62 n 62 LEU 62 A ILE 63 n 63 ILE 63 A TYR 64 n 64 TYR 64 A ASN 65 n 65 ASN 65 A GLN 66 n 66 GLN 66 A GLY 67 n 67 GLY 67 A PHE 68 n 68 PHE 68 A GLU 69 n 69 GLU 69 A ILE 70 n 70 ILE 70 A VAL 71 n 71 VAL 71 A LEU 72 n 72 LEU 72 A ASN 73 n 73 ASN 73 A ASP 74 n 74 ASP 74 A TYR 75 n 75 TYR 75 A LYS 76 n 76 LYS 76 A TRP 77 n 77 TRP 77 A PHE 78 n 78 PHE 78 A ALA 79 n 79 ALA 79 A PHE 80 n 80 PHE 80 A PHE 81 n 81 PHE 81 A LYS 82 n 82 LYS 82 A TYR 83 n 83 TYR 83 A GLU 84 n 84 GLU 84 A VAL 85 n 85 VAL 85 A LYS 86 n 86 LYS 86 A GLY 87 n 87 GLY 87 A SER 88 n 88 SER 88 A ARG 89 n 89 ARG 89 A ALA 90 n 90 ALA 90 A ILE 91 n 91 ILE 91 A SER 92 n 92 SER 92 A TYR 93 n 93 TYR 93 A CYS 94 n 94 CYS 94 A HIS 95 n 95 HIS 95 A GLU 96 n 96 GLU 96 A THR 97 n 97 THR 97 A MET 98 n 98 MET 98 A THR 99 n 99 THR 99 A GLY 100 n 100 GLY 100 A TRP 101 n 101 TRP 101 A VAL 102 n 102 VAL 102 A HIS 103 n 103 HIS 103 A ASP 104 n 104 ASP 104 A VAL 105 n 105 VAL 105 A LEU 106 n 106 LEU 106 A GLY 107 n 107 GLY 107 A ARG 108 n 108 ARG 108 A ASN 109 n 109 ASN 109 A TRP 110 n 110 TRP 110 A ALA 111 n 111 ALA 111 A CYS 112 n 112 CYS 112 A PHE 113 n 113 PHE 113 A VAL 114 n 114 VAL 114 A GLY 115 n 115 GLY 115 A LYS 116 n 116 LYS 116 A LYS 117 n 117 LYS 117 A MET 118 n 118 MET 118 A n 119 119 A n 120 120 A n 121 121 A n 122 122 A n 123 123 A n 124 124 A n 125 125 A n 126 126 A n 127 127 A n 128 128 A n 129 129 A n 130 130 A n 131 131 A n 132 132 A n 133 133 A n 134 134 A n 135 135 A n 136 136 A n 137 137 A n 138 138 A n 139 139 A n 140 140 A n 141 141 A n 142 142 A n 143 143 A n 144 144 A n 145 145 A n 146 146 A n 147 147 A n 148 148 A n 149 149 A n 150 150 A n 151 151 A n 152 152 A n 153 153 A n 154 154 A n 155 155 A n 156 156 A n 157 157 A n 158 158 A n 159 159 A n 160 160 A n 161 161 A n 162 162 A n 163 163 A n 164 164 A n 165 165 A n 166 166 A n 167 167 A n 168 168 A n 169 169 A n 170 170 A n 171 171 A n 172 172 A n 173 173 A n 174 174 A n 175 175 A n 176 176 A n 177 177 A n 178 178 A n 179 179 A n 180 180 A n 181 181 A n 182 182 A n 183 183 A n 184 184 A n 185 185 A n 186 186 A n 187 187 A n 188 188 A n 189 189 A n 190 190 A n 191 191 A n 192 192 A n 193 193 A n 194 194 A n 195 195 A n 196 196 A n 197 197 A n 198 198 A n 199 199 A n 200 200 A n 201 201 A n 202 202 A n 203 203 A LEU 204 n 204 LEU 204 A SER 205 n 205 SER 205 A LEU 206 n 206 LEU 206 A PRO 207 n 207 PRO 207 A GLU 208 n 208 GLU 208 A SER 209 n 209 SER 209 A TRP 210 n 210 TRP 210 A ASP 211 n 211 ASP 211 A TRP 212 n 212 TRP 212 A ARG 213 n 213 ARG 213 A ASN 214 n 214 ASN 214 A VAL 215 n 215 VAL 215 A ARG 216 n 216 ARG 216 A GLY 217 n 217 GLY 217 A ILE 218 n 218 ILE 218 A ASN 219 n 219 ASN 219 A PHE 220 n 220 PHE 220 A VAL 221 n 221 VAL 221 A SER 222 n 222 SER 222 A PRO 223 n 223 PRO 223 A VAL 224 n 224 VAL 224 A ARG 225 n 225 ARG 225 A ASN 226 n 226 ASN 226 A GLN 227 n 227 GLN 227 A GLU 228 n 228 GLU 228 A SER 229 n 229 SER 229 A CYS 230 n 230 CYS 230 A GLY 231 n 231 GLY 231 A SER 232 n 232 SER 232 A CYS 233 n 233 CYS 233 A TYR 234 n 234 TYR 234 A SER 235 n 235 SER 235 A PHE 236 n 236 PHE 236 A ALA 237 n 237 ALA 237 A SER 238 n 238 SER 238 A LEU 239 n 239 LEU 239 A GLY 240 n 240 GLY 240 A MET 241 n 241 MET 241 A LEU 242 n 242 LEU 242 A GLU 243 n 243 GLU 243 A ALA 244 n 244 ALA 244 A ARG 245 n 245 ARG 245 A ILE 246 n 246 ILE 246 A ARG 247 n 247 ARG 247 A ILE 248 n 248 ILE 248 A LEU 249 n 249 LEU 249 A THR 250 n 250 THR 250 A ASN 251 n 251 ASN 251 A ASN 252 n 252 ASN 252 A SER 253 n 253 SER 253 A GLN 254 n 254 GLN 254 A THR 255 n 255 THR 255 A PRO 256 n 256 PRO 256 A ILE 257 n 257 ILE 257 A LEU 258 n 258 LEU 258 A SER 259 n 259 SER 259 A PRO 260 n 260 PRO 260 A GLN 261 n 261 GLN 261 A GLU 262 n 262 GLU 262 A VAL 263 n 263 VAL 263 A VAL 264 n 264 VAL 264 A SER 265 n 265 SER 265 A CYS 266 n 266 CYS 266 A SER 267 n 267 SER 267 A PRO 268 n 268 PRO 268 A TYR 269 n 269 TYR 269 A ALA 270 n 270 ALA 270 A GLN 271 n 271 GLN 271 A GLY 272 n 272 GLY 272 A CYS 273 n 273 CYS 273 A ASP 274 n 274 ASP 274 A GLY 275 n 275 GLY 275 A GLY 276 n 276 GLY 276 A PHE 277 n 277 PHE 277 A PRO 278 n 278 PRO 278 A TYR 279 n 279 TYR 279 A LEU 280 n 280 LEU 280 A ILE 281 n 281 ILE 281 A ALA 282 n 282 ALA 282 A GLY 283 n 283 GLY 283 A LYS 284 n 284 LYS 284 A TYR 285 n 285 TYR 285 A ALA 286 n 286 ALA 286 A GLN 287 n 287 GLN 287 A ASP 288 n 288 ASP 288 A PHE 289 n 289 PHE 289 A GLY 290 n 290 GLY 290 A VAL 291 n 291 VAL 291 A VAL 292 n 292 VAL 292 A GLU 293 n 293 GLU 293 A GLU 294 n 294 GLU 294 A ASN 295 n 295 ASN 295 A CYS 296 n 296 CYS 296 A PHE 297 n 297 PHE 297 A PRO 298 n 298 PRO 298 A TYR 299 n 299 TYR 299 A THR 300 n 300 THR 300 A ALA 301 n 301 ALA 301 A THR 302 n 302 THR 302 A ASP 303 n 303 ASP 303 A ALA 304 n 304 ALA 304 A PRO 305 n 305 PRO 305 A CYS 306 n 306 CYS 306 A LYS 307 n 307 LYS 307 A PRO 308 n 308 PRO 308 A LYS 309 n 309 LYS 309 A GLU 310 n 310 GLU 310 A ASN 311 n 311 ASN 311 A CYS 312 n 312 CYS 312 A LEU 313 n 313 LEU 313 A ARG 314 n 314 ARG 314 A TYR 315 n 315 TYR 315 A TYR 316 n 316 TYR 316 A SER 317 n 317 SER 317 A SER 318 n 318 SER 318 A GLU 319 n 319 GLU 319 A TYR 320 n 320 TYR 320 A TYR 321 n 321 TYR 321 A TYR 322 n 322 TYR 322 A VAL 323 n 323 VAL 323 A GLY 324 n 324 GLY 324 A GLY 325 n 325 GLY 325 A PHE 326 n 326 PHE 326 A TYR 327 n 327 TYR 327 A GLY 328 n 328 GLY 328 A GLY 329 n 329 GLY 329 A CYS 330 n 330 CYS 330 A ASN 331 n 331 ASN 331 A GLU 332 n 332 GLU 332 A ALA 333 n 333 ALA 333 A LEU 334 n 334 LEU 334 A MET 335 n 335 MET 335 A LYS 336 n 336 LYS 336 A LEU 337 n 337 LEU 337 A GLU 338 n 338 GLU 338 A LEU 339 n 339 LEU 339 A VAL 340 n 340 VAL 340 A LYS 341 n 341 LYS 341 A HIS 342 n 342 HIS 342 A GLY 343 n 343 GLY 343 A PRO 344 n 344 PRO 344 A MET 345 n 345 MET 345 A ALA 346 n 346 ALA 346 A VAL 347 n 347 VAL 347 A ALA 348 n 348 ALA 348 A PHE 349 n 349 PHE 349 A GLU 350 n 350 GLU 350 A VAL 351 n 351 VAL 351 A HIS 352 n 352 HIS 352 A ASP 353 n 353 ASP 353 A ASP 354 n 354 ASP 354 A PHE 355 n 355 PHE 355 A LEU 356 n 356 LEU 356 A HIS 357 n 357 HIS 357 A TYR 358 n 358 TYR 358 A HIS 359 n 359 HIS 359 A SER 360 n 360 SER 360 A GLY 361 n 361 GLY 361 A ILE 362 n 362 ILE 362 A TYR 363 n 363 TYR 363 A HIS 364 n 364 HIS 364 A HIS 365 n 365 HIS 365 A n 366 366 A n 367 367 A n 368 368 A n 369 369 A n 370 370 A PRO 371 n 371 PRO 371 A PHE 372 n 372 PHE 372 A ASN 373 n 373 ASN 373 A PRO 374 n 374 PRO 374 A PHE 375 n 375 PHE 375 A GLU 376 n 376 GLU 376 A LEU 377 n 377 LEU 377 A THR 378 n 378 THR 378 A ASN 379 n 379 ASN 379 A HIS 380 n 380 HIS 380 A ALA 381 n 381 ALA 381 A VAL 382 n 382 VAL 382 A LEU 383 n 383 LEU 383 A LEU 384 n 384 LEU 384 A VAL 385 n 385 VAL 385 A GLY 386 n 386 GLY 386 A TYR 387 n 387 TYR 387 A GLY 388 n 388 GLY 388 A LYS 389 n 389 LYS 389 A ASP 390 n 390 ASP 390 A PRO 391 n 391 PRO 391 A VAL 392 n 392 VAL 392 A THR 393 n 393 THR 393 A GLY 394 n 394 GLY 394 A LEU 395 n 395 LEU 395 A ASP 396 n 396 ASP 396 A TYR 397 n 397 TYR 397 A TRP 398 n 398 TRP 398 A ILE 399 n 399 ILE 399 A VAL 400 n 400 VAL 400 A LYS 401 n 401 LYS 401 A ASN 402 n 402 ASN 402 A SER 403 n 403 SER 403 A TRP 404 n 404 TRP 404 A GLY 405 n 405 GLY 405 A SER 406 n 406 SER 406 A GLN 407 n 407 GLN 407 A TRP 408 n 408 TRP 408 A GLY 409 n 409 GLY 409 A GLU 410 n 410 GLU 410 A SER 411 n 411 SER 411 A GLY 412 n 412 GLY 412 A TYR 413 n 413 TYR 413 A PHE 414 n 414 PHE 414 A ARG 415 n 415 ARG 415 A ILE 416 n 416 ILE 416 A ARG 417 n 417 ARG 417 A ARG 418 n 418 ARG 418 A GLY 419 n 419 GLY 419 A THR 420 n 420 THR 420 A ASP 421 n 421 ASP 421 A GLU 422 n 422 GLU 422 A CYS 423 n 423 CYS 423 A ALA 424 n 424 ALA 424 A ILE 425 n 425 ILE 425 A GLU 426 n 426 GLU 426 A SER 427 n 427 SER 427 A ILE 428 n 428 ILE 428 A ALA 429 n 429 ALA 429 A MET 430 n 430 MET 430 A ALA 431 n 431 ALA 431 A ALA 432 n 432 ALA 432 A ILE 433 n 433 ILE 433 A PRO 434 n 434 PRO 434 A ILE 435 n 435 ILE 435 A PRO 436 n 436 PRO 436 A LYS 437 n 437 LYS 437 A LEU 438 n 438 LEU 438 A author_and_software_defined_assembly PQS 4 tetrameric software_defined_assembly PISA 2 dimeric software_defined_assembly PISA 2 dimeric 4030 -30 28380 2810 -25 29470 A ASN 5 GLYCOSYLATION SITE A ASN 5 ASN A ASN 251 GLYCOSYLATION SITE A ASN 251 ASN 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 4_665 -x+1,-y+1,z crystal symmetry operation 83.1200000000 143.9680631251 0.0000000000 -0.5000000000 0.8660254038 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 7_556 y,x,-z+4/3 crystal symmetry operation 0.0000000000 0.0000000000 107.3066666667 0.5000000000 -0.8660254038 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 10_666 -y+1,-x+1,-z+4/3 crystal symmetry operation 83.1200000000 143.9680631251 107.3066666667 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 11_556 -x+y,y,-z+1 crystal symmetry operation 0.0000000000 0.0000000000 80.4800000000 A N VAL 19 A N VAL 19 A O GLU 38 A O GLU 38 A N LYS 45 A N LYS 45 A O THR 49 A O THR 49 A O ALA 50 A O ALA 50 A N GLY 58 A N GLY 58 A N ILE 63 A N ILE 63 A O GLY 67 A O GLY 67 A N LEU 72 A N LEU 72 A O TYR 75 A O TYR 75 A N LYS 86 A N LYS 86 A O ARG 89 A O ARG 89 A N THR 97 A N THR 97 A O GLY 115 A O GLY 115 A O LYS 116 A O LYS 116 A N VAL 16 A N VAL 16 A N GLN 18 A N GLN 18 A O VAL 114 A O VAL 114 A O PHE 113 A O PHE 113 A N GLY 100 A N GLY 100 A O HIS 103 A O HIS 103 A N LYS 76 A N LYS 76 A O TRP 210 A O TRP 210 A N TYR 387 A N TYR 387 A N LEU 384 A N LEU 384 A O MET 345 A O MET 345 A N PHE 349 A N PHE 349 A O HIS 380 A O HIS 380 A O GLY 388 A O GLY 388 A N TYR 397 A N TYR 397 A N VAL 400 A N VAL 400 A O PHE 414 A O PHE 414 A O ARG 415 A O ARG 415 A N TYR 363 A N TYR 363 A O VAL 291 A O VAL 291 A N TYR 315 A N TYR 315 A O TYR 321 A O TYR 321 A N ALA 431 A N ALA 431 1 A CL 503 D CL 1 A ALA 119 A ALA 119 1 Y 1 A ASN 120 A ASN 120 1 Y 1 A HIS 121 A HIS 121 1 Y 1 A SER 122 A SER 122 1 Y 1 A GLU 123 A GLU 123 1 Y 1 A LYS 124 A LYS 124 1 Y 1 A VAL 125 A VAL 125 1 Y 1 A TYR 126 A TYR 126 1 Y 1 A VAL 127 A VAL 127 1 Y 1 A ASN 128 A ASN 128 1 Y 1 A VAL 129 A VAL 129 1 Y 1 A ALA 130 A ALA 130 1 Y 1 A HIS 131 A HIS 131 1 Y 1 A LEU 132 A LEU 132 1 Y 1 A GLY 133 A GLY 133 1 Y 1 A GLY 134 A GLY 134 1 Y 1 A LEU 135 A LEU 135 1 Y 1 A GLN 136 A GLN 136 1 Y 1 A GLU 137 A GLU 137 1 Y 1 A LYS 138 A LYS 138 1 Y 1 A TYR 139 A TYR 139 1 Y 1 A SER 140 A SER 140 1 Y 1 A GLU 141 A GLU 141 1 Y 1 A ARG 142 A ARG 142 1 Y 1 A LEU 143 A LEU 143 1 Y 1 A TYR 144 A TYR 144 1 Y 1 A SER 145 A SER 145 1 Y 1 A HIS 146 A HIS 146 1 Y 1 A HIS 147 A HIS 147 1 Y 1 A HIS 148 A HIS 148 1 Y 1 A ASN 149 A ASN 149 1 Y 1 A PHE 150 A PHE 150 1 Y 1 A VAL 151 A VAL 151 1 Y 1 A LYS 152 A LYS 152 1 Y 1 A ALA 153 A ALA 153 1 Y 1 A ILE 154 A ILE 154 1 Y 1 A ASN 155 A ASN 155 1 Y 1 A SER 156 A SER 156 1 Y 1 A VAL 157 A VAL 157 1 Y 1 A GLN 158 A GLN 158 1 Y 1 A LYS 159 A LYS 159 1 Y 1 A SER 160 A SER 160 1 Y 1 A TRP 161 A TRP 161 1 Y 1 A THR 162 A THR 162 1 Y 1 A ALA 163 A ALA 163 1 Y 1 A THR 164 A THR 164 1 Y 1 A THR 165 A THR 165 1 Y 1 A TYR 166 A TYR 166 1 Y 1 A ARG 167 A ARG 167 1 Y 1 A ARG 168 A ARG 168 1 Y 1 A TYR 169 A TYR 169 1 Y 1 A GLU 170 A GLU 170 1 Y 1 A LYS 171 A LYS 171 1 Y 1 A LEU 172 A LEU 172 1 Y 1 A SER 173 A SER 173 1 Y 1 A ILE 174 A ILE 174 1 Y 1 A ARG 175 A ARG 175 1 Y 1 A ASP 176 A ASP 176 1 Y 1 A LEU 177 A LEU 177 1 Y 1 A ILE 178 A ILE 178 1 Y 1 A ARG 179 A ARG 179 1 Y 1 A ARG 180 A ARG 180 1 Y 1 A SER 181 A SER 181 1 Y 1 A GLY 182 A GLY 182 1 Y 1 A HIS 183 A HIS 183 1 Y 1 A SER 184 A SER 184 1 Y 1 A GLY 185 A GLY 185 1 Y 1 A ARG 186 A ARG 186 1 Y 1 A ILE 187 A ILE 187 1 Y 1 A LEU 188 A LEU 188 1 Y 1 A ARG 189 A ARG 189 1 Y 1 A PRO 190 A PRO 190 1 Y 1 A LYS 191 A LYS 191 1 Y 1 A PRO 192 A PRO 192 1 Y 1 A ALA 193 A ALA 193 1 Y 1 A PRO 194 A PRO 194 1 Y 1 A ILE 195 A ILE 195 1 Y 1 A THR 196 A THR 196 1 Y 1 A ASP 197 A ASP 197 1 Y 1 A GLU 198 A GLU 198 1 Y 1 A ILE 199 A ILE 199 1 Y 1 A GLN 200 A GLN 200 1 Y 1 A GLN 201 A GLN 201 1 Y 1 A GLN 202 A GLN 202 1 Y 1 A ILE 203 A ILE 203 1 Y 1 A THR 366 A THR 366 1 Y 1 A GLY 367 A GLY 367 1 Y 1 A LEU 368 A LEU 368 1 Y 1 A SER 369 A SER 369 1 Y 1 A ASP 370 A ASP 370 1 Y 1 A ASP 48 -159.55 29.76 1 A VAL 54 -105.49 41.04 1 A TYR 64 53.54 -107.20 1 A ARG 89 -117.95 -169.40 1 A ASP 211 -160.85 107.89 1 A ASN 214 -155.87 82.20 1 A GLU 228 53.88 -130.60 1 A SER 229 -96.83 58.19 1 A ASN 251 49.17 29.82 1 A ILE 281 -105.92 -65.26 1 A PHE 297 -159.78 81.41 1 A ASN 379 -147.57 13.48 1 A VAL 392 -99.28 -67.87 1 A ILE 428 -144.67 44.19 0.274 0.245 2.4 30.0 1303 26061 4.9998 94.2 1 2.4 30.0 83 2898 34 0 2781 2.4 30.0 1JQP 26061 0.071 1 13 99.2 0.322 2.4 1 data reduction DENZO data scaling SCALEPACK refinement CNS phasing CNS dipeptidyl peptidase I(E.C.3.4.14.1) dipeptidyl peptidase I (cathepsin C), a tetrameric cysteine protease of the papain family 1 N N 2 N N 2 N N 3 N N 4 N N 5 N N A THR 7 A THR 7 HELX_P A LEU 12 A LEU 12 1 1 6 A SER 232 A SER 232 HELX_P A THR 250 A THR 250 1 2 19 A SER 259 A SER 259 HELX_P A SER 267 A SER 267 1 3 9 A GLN 271 A GLN 271 HELX_P A CYS 273 A CYS 273 5 4 3 A PHE 277 A PHE 277 HELX_P A ALA 282 A ALA 282 1 5 6 A GLY 283 A GLY 283 HELX_P A PHE 289 A PHE 289 1 6 7 A GLU 294 A GLU 294 HELX_P A PHE 297 A PHE 297 5 7 4 A ASN 331 A ASN 331 HELX_P A GLY 343 A GLY 343 1 8 13 A HIS 352 A HIS 352 HELX_P A HIS 357 A HIS 357 1 9 6 A ASP 421 A ASP 421 HELX_P A ILE 425 A ILE 425 5 10 5 disulf 2.031 A CYS 6 A SG CYS 6 1_555 A CYS 94 A SG CYS 94 1_555 disulf 2.042 A CYS 30 A SG CYS 30 1_555 A CYS 112 A SG CYS 112 1_555 disulf 2.028 A CYS 230 A SG CYS 230 1_555 A CYS 273 A SG CYS 273 1_555 disulf 2.041 A CYS 266 A SG CYS 266 1_555 A CYS 306 A SG CYS 306 1_555 disulf 2.031 A CYS 296 A SG CYS 296 1_555 A CYS 312 A SG CYS 312 1_555 covale 1.450 one N-Glycosylation A ASN 5 A ND2 ASN 5 1_555 A NAG 501 B C1 NAG 1_555 covale 1.455 one N-Glycosylation A ASN 251 A ND2 ASN 251 1_555 A NAG 502 C C1 NAG 1_555 HYDROLASE cathepsin c, DPP I, papain, tetramer, chloride, cysteine protease, HYDROLASE A LYS 46 A LYS 46 1 A LEU 47 A LEU 47 -0.27 CATC_RAT UNP 1 25 P80067 DTPANCTYPDLLGTWVFQVGPRHPRSHINCSVMEPTEEKVVIHLKKLDTAYDEVGNSGYFTLIYNQGFEIVLNDYKWFAF FKYEVKGSRAISYCHETMTGWVHDYLGRNWACFVGKKMANHSEKVYVNVAHLGGLQEKYSERLYSHHHNFVKAINSVQKS WTATTYRRYEKLSIRDLIRRSGHSGRILRPKPAPITDEIQQQILSLPESWDWRNVRGINFVSPVRNQESCGSCYSFASIG MLEARIRILTNNSQTPILSPQEVVSCSPYAQGCDGGFPYLIAGKYAQDFGVVEENCFPYTATDAPCKPKENCLRYYSSEY YYVGGFYGGCNEALMKLELVKHGPMAVAFEVHDDFLHYHSGIYHHTGLSDPFNPFELTNHAVLLVGYGKDPVTGLDYWIV KNSWGSQWGESGYFRIRRGTDECAIESIAMAAIPIPKL 25 462 1JQP 1 438 P80067 A 1 1 438 1 TYR conflict VAL 105 1JQP A P80067 UNP 129 105 1 ILE conflict LEU 239 1JQP A P80067 UNP 263 239 12 7 3 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel A GLY 13 A GLY 13 A VAL 19 A VAL 19 A GLU 38 A GLU 38 A LYS 45 A LYS 45 A THR 49 A THR 49 A TYR 51 A TYR 51 A SER 57 A SER 57 A ILE 63 A ILE 63 A GLY 67 A GLY 67 A LEU 72 A LEU 72 A TYR 75 A TYR 75 A LYS 86 A LYS 86 A ARG 89 A ARG 89 A THR 97 A THR 97 A TRP 110 A TRP 110 A LYS 117 A LYS 117 A GLY 13 A GLY 13 A VAL 19 A VAL 19 A TRP 110 A TRP 110 A LYS 117 A LYS 117 A GLY 100 A GLY 100 A ASP 104 A ASP 104 A TYR 75 A TYR 75 A LYS 86 A LYS 86 A TRP 210 A TRP 210 A ASP 211 A ASP 211 A HIS 380 A HIS 380 A LYS 389 A LYS 389 A MET 345 A MET 345 A PHE 349 A PHE 349 A HIS 380 A HIS 380 A LYS 389 A LYS 389 A ASP 396 A ASP 396 A LYS 401 A LYS 401 A TYR 413 A TYR 413 A ARG 417 A ARG 417 A ILE 362 A ILE 362 A TYR 363 A TYR 363 A VAL 291 A VAL 291 A VAL 292 A VAL 292 A ARG 314 A ARG 314 A TYR 322 A TYR 322 A MET 430 A MET 430 A ILE 435 A ILE 435 181 P 64 2 2