1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Agrawal, R.K.
Linde, J.
Segupta, J.
Nierhaus, K.H.
Frank, J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
N
N
159
S
C
N
160
N
C
N
161
N
O
N
162
S
C
N
163
N
C
N
164
N
C
N
165
N
C
N
166
N
O
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
N
N
181
S
C
N
182
N
C
N
183
N
O
N
184
N
C
N
185
N
C
N
186
N
C
N
187
N
C
N
188
N
O
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
N
N
203
S
C
N
204
N
C
N
205
N
O
N
206
N
C
N
207
N
C
N
208
N
C
N
209
N
C
N
210
N
N
N
211
N
O
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
N
N
228
S
C
N
229
N
C
N
230
N
O
N
231
N
C
N
232
N
C
N
233
N
S
N
234
N
C
N
235
N
O
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
N
N
248
S
C
N
249
N
C
N
250
N
O
N
251
N
C
Y
252
N
C
Y
253
N
C
Y
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
N
258
N
O
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
N
N
271
S
C
N
272
N
C
N
273
N
O
N
274
N
C
N
275
N
C
N
276
N
C
N
277
N
O
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
N
C
N
292
N
O
N
293
N
O
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
N
N
302
S
C
N
303
N
C
N
304
N
O
N
305
R
C
N
306
N
O
N
307
N
C
N
308
N
O
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
N
C
Y
323
N
C
Y
324
N
C
Y
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
N
329
N
O
N
330
N
O
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
N
N
343
S
C
N
344
N
C
N
345
N
O
N
346
N
C
N
347
N
C
N
348
N
C
N
349
N
O
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
doub
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
doub
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
doub
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
doub
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
Y
246
N
doub
Y
247
N
sing
Y
248
N
sing
N
249
N
sing
Y
250
N
doub
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
doub
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
doub
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
doub
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
doub
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
Y
315
N
doub
Y
316
N
sing
Y
317
N
sing
N
318
N
sing
Y
319
N
doub
N
320
N
sing
Y
321
N
doub
N
322
N
sing
Y
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
doub
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
311
777
787
10.1006/jmbi.2001.4907
11518530
Localization of L11 protein on the ribosome and elucidation of its involvement in EF-G-dependent translocation.
2001
US
Cell(Cambridge,Mass.)
CELLB5
0998
0092-8674
97
491
502
10.1016/S0092-8674(00)80759-X
A Detailed View of a Ribosomal Active Site: The Structure of the L11-RNA Complex
1999
US
Cell(Cambridge,Mass.)
CELLB5
0998
0092-8674
100
537
549
10.1016/S0092-8674(00)80690-X
EF-G-dependent GTP hydrolysis induces solution structure of the E. coli 70S ribosome at 11.5A resolution
2000
US
Nat.Struct.Biol.
NSBIEW
2024
1072-8368
6
643
647
10.1038/10695
EF-G-dependent GTP hydrolysis induces translocation accompanied by large conformational changes in the 70S ribosome
1999
10.2210/pdb1jqt/pdb
pdb_00001jqt
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
REFINEMENT PROTOCOL--MANUAL DETAILS--This structure was generated by fitting
the X-ray crystal structure of L11 into the 70S E. coli ribosome map. L11
(linker region between N and C terminal) was modeled to accommodate the
observed densities. Conformational changes occur in protein L11 and EF-G due to
the binding of EF-G to the 70S ribosome. These changed conformations were
modeled based on the fitting of the crystal coordinates to the low resolution
ribosome map (factor-bound) and energy minimizing the fitted structures.
OTHER
REAL
VISUAL AGREEMENT
1JQT
36113
18
FSC 0.5 CUT-OFF
POINT
70S ribosome
0
RIBOSOME
PARTICLE
1
1
SINGLE PARTICLE
10
GENERIC FILM
OTHER
FLOOD BEAM
FEI/PHILIPS EM420
BRIGHT FIELD
52000
GATAN LIQUID NITROGEN
1
1JQT
C1
NO
NO
NO
YES
L11 from E. coli 70S ribosome modeled by crystal structure of L11 from Thermatogoma maritima
14865.637
50S Ribosomal protein L11
1
nat
polymer
no
no
AKKVAAQIKLQLPAGKATPAPPVGPALGQHGVNIMEFCKRFNAETADKAGMILPVVITVYEDKSFTFIIKTPPASFLLKK
AAGIEKGSSEPKRKIVGKVTRKQIEEIAKTKMPDLNANSLEAAMKIIEGTAKSMGIEVV
AKKVAAQIKLQLPAGKATPAPPVGPALGQHGVNIMEFCKRFNAETADKAGMILPVVITVYEDKSFTFIIKTPPASFLLKK
AAGIEKGSSEPKRKIVGKVTRKQIEEIAKTKMPDLNANSLEAAMKIIEGTAKSMGIEVV
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Escherichia
sample
562
Escherichia coli
chem_comp_atom
chem_comp_bond
database_2
em_image_scans
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
1
0
2001-09-07
1
1
2008-04-27
1
2
2011-07-13
1
3
2024-02-07
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
CA ATOMS ONLY
Fitting of Components with Known Structure Into An 11.5A Cryo-EM Map Of the
E.coli 70s Ribosome
RCSB
Y
RCSB
2001-08-07
REL
This structure was generated by fitting the X-ray crystal structure of
L11 into the 70S E. coli ribosome map. L11 (linker region between N and
C terminal) was modeled to accommodate the observed densities.
Conformational changes occur in protein L11 when it is bound to 70S
ribosome. This changed conformation was modeled based on the fitting
of the crystal coordinates to the low resolution ribosome map and
energy minimizing the fitted structures.
Molecular Modeling based on crystal structures
Numerical Algorithms Group, Inc
data analysis
IRIS Explorer
3.5
Jones, Zou, Cowan, Kjeldgaard
data analysis
O
5.10
Frank
processing
SPIDER
4.48
Biosym/MSI Inc.
data analysis
Insight II
1998
n
1
-5
A
n
2
-4
A
n
3
-3
A
n
4
-2
A
n
5
-1
A
n
6
0
A
GLN
1
n
7
GLN
1
A
ILE
2
n
8
ILE
2
A
LYS
3
n
9
LYS
3
A
LEU
4
n
10
LEU
4
A
GLN
5
n
11
GLN
5
A
LEU
6
n
12
LEU
6
A
PRO
7
n
13
PRO
7
A
ALA
8
n
14
ALA
8
A
GLY
9
n
15
GLY
9
A
LYS
10
n
16
LYS
10
A
ALA
11
n
17
ALA
11
A
THR
12
n
18
THR
12
A
PRO
13
n
19
PRO
13
A
ALA
14
n
20
ALA
14
A
PRO
15
n
21
PRO
15
A
PRO
16
n
22
PRO
16
A
VAL
17
n
23
VAL
17
A
GLY
18
n
24
GLY
18
A
PRO
19
n
25
PRO
19
A
ALA
20
n
26
ALA
20
A
LEU
21
n
27
LEU
21
A
GLY
22
n
28
GLY
22
A
GLN
23
n
29
GLN
23
A
HIS
24
n
30
HIS
24
A
GLY
25
n
31
GLY
25
A
VAL
26
n
32
VAL
26
A
ASN
27
n
33
ASN
27
A
ILE
28
n
34
ILE
28
A
MET
29
n
35
MET
29
A
GLU
30
n
36
GLU
30
A
PHE
31
n
37
PHE
31
A
CYS
32
n
38
CYS
32
A
LYS
33
n
39
LYS
33
A
ARG
34
n
40
ARG
34
A
PHE
35
n
41
PHE
35
A
ASN
36
n
42
ASN
36
A
ALA
37
n
43
ALA
37
A
GLU
38
n
44
GLU
38
A
THR
39
n
45
THR
39
A
ALA
40
n
46
ALA
40
A
ASP
41
n
47
ASP
41
A
LYS
42
n
48
LYS
42
A
ALA
43
n
49
ALA
43
A
GLY
44
n
50
GLY
44
A
MET
45
n
51
MET
45
A
ILE
46
n
52
ILE
46
A
LEU
47
n
53
LEU
47
A
PRO
48
n
54
PRO
48
A
VAL
49
n
55
VAL
49
A
VAL
50
n
56
VAL
50
A
ILE
51
n
57
ILE
51
A
THR
52
n
58
THR
52
A
VAL
53
n
59
VAL
53
A
TYR
54
n
60
TYR
54
A
GLU
55
n
61
GLU
55
A
ASP
56
n
62
ASP
56
A
LYS
57
n
63
LYS
57
A
SER
58
n
64
SER
58
A
PHE
59
n
65
PHE
59
A
THR
60
n
66
THR
60
A
PHE
61
n
67
PHE
61
A
ILE
62
n
68
ILE
62
A
ILE
63
n
69
ILE
63
A
LYS
64
n
70
LYS
64
A
THR
65
n
71
THR
65
A
PRO
66
n
72
PRO
66
A
PRO
67
n
73
PRO
67
A
ALA
68
n
74
ALA
68
A
SER
69
n
75
SER
69
A
PHE
70
n
76
PHE
70
A
LEU
71
n
77
LEU
71
A
LEU
72
n
78
LEU
72
A
LYS
73
n
79
LYS
73
A
LYS
74
n
80
LYS
74
A
ALA
75
n
81
ALA
75
A
ALA
76
n
82
ALA
76
A
GLY
77
n
83
GLY
77
A
ILE
78
n
84
ILE
78
A
GLU
79
n
85
GLU
79
A
LYS
80
n
86
LYS
80
A
GLY
81
n
87
GLY
81
A
SER
82
n
88
SER
82
A
SER
83
n
89
SER
83
A
GLU
84
n
90
GLU
84
A
PRO
85
n
91
PRO
85
A
LYS
86
n
92
LYS
86
A
ARG
87
n
93
ARG
87
A
LYS
88
n
94
LYS
88
A
ILE
89
n
95
ILE
89
A
VAL
90
n
96
VAL
90
A
GLY
91
n
97
GLY
91
A
LYS
92
n
98
LYS
92
A
VAL
93
n
99
VAL
93
A
THR
94
n
100
THR
94
A
ARG
95
n
101
ARG
95
A
LYS
96
n
102
LYS
96
A
GLN
97
n
103
GLN
97
A
ILE
98
n
104
ILE
98
A
GLU
99
n
105
GLU
99
A
GLU
100
n
106
GLU
100
A
ILE
101
n
107
ILE
101
A
ALA
102
n
108
ALA
102
A
LYS
103
n
109
LYS
103
A
THR
104
n
110
THR
104
A
LYS
105
n
111
LYS
105
A
MET
106
n
112
MET
106
A
PRO
107
n
113
PRO
107
A
ASP
108
n
114
ASP
108
A
LEU
109
n
115
LEU
109
A
ASN
110
n
116
ASN
110
A
ALA
111
n
117
ALA
111
A
ASN
112
n
118
ASN
112
A
SER
113
n
119
SER
113
A
LEU
114
n
120
LEU
114
A
GLU
115
n
121
GLU
115
A
ALA
116
n
122
ALA
116
A
ALA
117
n
123
ALA
117
A
MET
118
n
124
MET
118
A
LYS
119
n
125
LYS
119
A
ILE
120
n
126
ILE
120
A
ILE
121
n
127
ILE
121
A
GLU
122
n
128
GLU
122
A
GLY
123
n
129
GLY
123
A
THR
124
n
130
THR
124
A
ALA
125
n
131
ALA
125
A
LYS
126
n
132
LYS
126
A
SER
127
n
133
SER
127
A
MET
128
n
134
MET
128
A
GLY
129
n
135
GLY
129
A
ILE
130
n
136
ILE
130
A
GLU
131
n
137
GLU
131
A
VAL
132
n
138
VAL
132
A
VAL
133
n
139
VAL
133
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
ALA
-5
A
ALA
1
1
Y
1
A
LYS
-4
A
LYS
2
1
Y
1
A
LYS
-3
A
LYS
3
1
Y
1
A
VAL
-2
A
VAL
4
1
Y
1
A
ALA
-1
A
ALA
5
1
Y
1
A
ALA
0
A
ALA
6
1
Y
0
133
0
0
133
Fitting of L11 protein in the low resolution cryo-EM map of E.coli 70S ribosome
1
N
N
RIBOSOME
L11, cryo-EM, 70S E.coli ribosome, RIBOSOME
RL11_THEMA
UNP
1
1
P29395
AKKVAAQIKLQLPAGKATPAPPVGPALGQHGVNIMEFCKRFNAETADKAGMILPVVITVYEDKSFTFIIKTPPASFLLKK
AAGIEKGSSEPKRKIVGKVTRKQIEEIAKTKMPDLNANSLEAAMKIIEGTAKSMGIEVV
1
139
1JQT
-5
133
P29395
A
1
1
139