0.015314
0.000000
0.000000
0.000000
0.012195
0.000000
0.000000
0.000000
0.010050
0.00000
0.00000
0.00000
Nelson, C.A.
Fremont, D.H.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
90.00
65.300
82.000
99.500
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
US
J.Clin.Invest.
JCINAO
0797
0021-9738
108
971
979
10.1172/JCI200113890
11581298
Crystal structure of the TRANCE/RANKL cytokine reveals determinants of receptor-ligand specificity
2001
10.2210/pdb1jtz/pdb
pdb_00001jtz
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
110
1
YALE MIRRORS
IMAGE PLATE
2000-12-04
RIGAKU RAXIS IV
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
19056.359
TUMOR NECROSIS FACTOR LIGAND SUPERFAMILY MEMBER 11
C-TERMINAL RECEPTOR-BINDING ECTODOMAIN, Residues 156-316
3
man
polymer
18.015
water
147
nat
water
TNF-RELATED ACTIVATION-INDUCED CYTOKINE, TRANCE, RECEPTOR ACTIVATOR OF NF-KAPPA-B LIGAND, RANKL, OSTEOCLAST DIFFERENTIATION FACTOR, ODF, OSTEOPROTEGERIN LIGAND, OPGL, TNFSF11
no
no
GPLGSPEFPRRGKPEAQPFAHLTINAASIPSGSHKVTLSSWYHDRGWAKISNMTLSNGKLRVNQDGFYYLYANICFRHHE
TSGSVPTDYLQLMVYVVKTSIKIPSSHNLMKGGSTKNWSGNSEFHFYSINVGGFFKLRAGEEISIQVSNPSLLDPDQDAT
YFGAFKVQDID
GPLGSPEFPRRGKPEAQPFAHLTINAASIPSGSHKVTLSSWYHDRGWAKISNMTLSNGKLRVNQDGFYYLYANICFRHHE
TSGSVPTDYLQLMVYVVKTSIKIPSSHNLMKGGSTKNWSGNSEFHFYSINVGGFFKLRAGEEISIQVSNPSLLDPDQDAT
YFGAFKVQDID
X,Y,Z
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
house mouse
Mus
Escherichia
Escherichia coli
sample
RANKL
10090
Mus musculus
469008
Escherichia coli BL21(DE3)
BL21 (DE3)
PLASMID
pGEX-6P-1
1
2.33
46
VAPOR DIFFUSION, HANGING DROP
7.5
11-14% PEG 4000, 16 mM calcium chloride, 80 mM Hepes, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Refinement description
1
0
2001-09-12
1
1
2008-04-27
1
2
2011-07-13
1
3
2023-08-16
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
RCSB
Y
RCSB
2001-08-23
REL
HOH
water
1TNR
CHIMERA OF PDB ENTRIES 1TNR (CHAIN A) AND 1D4V (CHAIN B)
PDB
experimental model
1D4V
CHIMERA OF PDB ENTRIES 1TNR (CHAIN A) AND 1D4V (CHAIN B)
PDB
experimental model
WAT
1
2
HOH
HOH
317
X
WAT
4
2
HOH
HOH
318
X
WAT
7
2
HOH
HOH
319
X
WAT
8
2
HOH
HOH
320
X
WAT
9
2
HOH
HOH
321
X
WAT
10
2
HOH
HOH
322
X
WAT
11
2
HOH
HOH
323
X
WAT
12
2
HOH
HOH
324
X
WAT
13
2
HOH
HOH
325
X
WAT
14
2
HOH
HOH
326
X
WAT
15
2
HOH
HOH
327
X
WAT
17
2
HOH
HOH
328
X
WAT
19
2
HOH
HOH
329
X
WAT
20
2
HOH
HOH
330
X
WAT
22
2
HOH
HOH
331
X
WAT
24
2
HOH
HOH
332
X
WAT
26
2
HOH
HOH
333
X
WAT
27
2
HOH
HOH
334
X
WAT
28
2
HOH
HOH
335
X
WAT
31
2
HOH
HOH
336
X
WAT
33
2
HOH
HOH
337
X
WAT
34
2
HOH
HOH
338
X
WAT
36
2
HOH
HOH
339
X
WAT
38
2
HOH
HOH
340
X
WAT
39
2
HOH
HOH
341
X
WAT
40
2
HOH
HOH
342
X
WAT
41
2
HOH
HOH
343
X
WAT
42
2
HOH
HOH
344
X
WAT
43
2
HOH
HOH
345
X
WAT
45
2
HOH
HOH
346
X
WAT
47
2
HOH
HOH
347
X
WAT
48
2
HOH
HOH
348
X
WAT
50
2
HOH
HOH
349
X
WAT
54
2
HOH
HOH
350
X
WAT
56
2
HOH
HOH
351
X
WAT
59
2
HOH
HOH
352
X
WAT
65
2
HOH
HOH
353
X
WAT
69
2
HOH
HOH
354
X
WAT
73
2
HOH
HOH
355
X
WAT
74
2
HOH
HOH
356
X
WAT
79
2
HOH
HOH
357
X
WAT
80
2
HOH
HOH
358
X
WAT
85
2
HOH
HOH
359
X
WAT
88
2
HOH
HOH
360
X
WAT
89
2
HOH
HOH
361
X
WAT
90
2
HOH
HOH
362
X
WAT
93
2
HOH
HOH
363
X
WAT
94
2
HOH
HOH
364
X
WAT
95
2
HOH
HOH
365
X
WAT
97
2
HOH
HOH
366
X
WAT
98
2
HOH
HOH
367
X
WAT
100
2
HOH
HOH
368
X
WAT
102
2
HOH
HOH
369
X
WAT
106
2
HOH
HOH
370
X
WAT
108
2
HOH
HOH
371
X
WAT
110
2
HOH
HOH
372
X
WAT
111
2
HOH
HOH
373
X
WAT
112
2
HOH
HOH
374
X
WAT
114
2
HOH
HOH
375
X
WAT
117
2
HOH
HOH
376
X
WAT
118
2
HOH
HOH
377
X
WAT
124
2
HOH
HOH
378
X
WAT
127
2
HOH
HOH
379
X
WAT
128
2
HOH
HOH
380
X
WAT
135
2
HOH
HOH
381
X
WAT
138
2
HOH
HOH
382
X
WAT
141
2
HOH
HOH
383
X
WAT
147
2
HOH
HOH
384
X
WAT
2
2
HOH
HOH
2
Y
WAT
3
2
HOH
HOH
3
Y
WAT
6
2
HOH
HOH
6
Y
WAT
16
2
HOH
HOH
16
Y
WAT
25
2
HOH
HOH
25
Y
WAT
29
2
HOH
HOH
29
Y
WAT
30
2
HOH
HOH
30
Y
WAT
35
2
HOH
HOH
35
Y
WAT
49
2
HOH
HOH
49
Y
WAT
51
2
HOH
HOH
51
Y
WAT
58
2
HOH
HOH
58
Y
WAT
60
2
HOH
HOH
60
Y
WAT
61
2
HOH
HOH
61
Y
WAT
66
2
HOH
HOH
66
Y
WAT
71
2
HOH
HOH
71
Y
WAT
72
2
HOH
HOH
72
Y
WAT
78
2
HOH
HOH
78
Y
WAT
83
2
HOH
HOH
83
Y
WAT
84
2
HOH
HOH
84
Y
WAT
87
2
HOH
HOH
87
Y
WAT
91
2
HOH
HOH
91
Y
WAT
99
2
HOH
HOH
99
Y
WAT
104
2
HOH
HOH
104
Y
WAT
119
2
HOH
HOH
119
Y
WAT
120
2
HOH
HOH
120
Y
WAT
125
2
HOH
HOH
125
Y
WAT
130
2
HOH
HOH
130
Y
WAT
131
2
HOH
HOH
131
Y
WAT
132
2
HOH
HOH
132
Y
WAT
134
2
HOH
HOH
134
Y
WAT
136
2
HOH
HOH
136
Y
WAT
137
2
HOH
HOH
137
Y
WAT
139
2
HOH
HOH
139
Y
WAT
140
2
HOH
HOH
140
Y
WAT
143
2
HOH
HOH
143
Y
WAT
5
2
HOH
HOH
317
Z
WAT
18
2
HOH
HOH
318
Z
WAT
21
2
HOH
HOH
319
Z
WAT
23
2
HOH
HOH
320
Z
WAT
32
2
HOH
HOH
321
Z
WAT
37
2
HOH
HOH
322
Z
WAT
44
2
HOH
HOH
323
Z
WAT
46
2
HOH
HOH
324
Z
WAT
52
2
HOH
HOH
325
Z
WAT
53
2
HOH
HOH
326
Z
WAT
55
2
HOH
HOH
327
Z
WAT
57
2
HOH
HOH
328
Z
WAT
62
2
HOH
HOH
329
Z
WAT
63
2
HOH
HOH
330
Z
WAT
64
2
HOH
HOH
331
Z
WAT
67
2
HOH
HOH
332
Z
WAT
68
2
HOH
HOH
333
Z
WAT
70
2
HOH
HOH
334
Z
WAT
75
2
HOH
HOH
335
Z
WAT
76
2
HOH
HOH
336
Z
WAT
77
2
HOH
HOH
337
Z
WAT
81
2
HOH
HOH
338
Z
WAT
82
2
HOH
HOH
339
Z
WAT
86
2
HOH
HOH
340
Z
WAT
92
2
HOH
HOH
341
Z
WAT
96
2
HOH
HOH
342
Z
WAT
101
2
HOH
HOH
343
Z
WAT
103
2
HOH
HOH
344
Z
WAT
105
2
HOH
HOH
345
Z
WAT
107
2
HOH
HOH
346
Z
WAT
109
2
HOH
HOH
347
Z
WAT
113
2
HOH
HOH
348
Z
WAT
115
2
HOH
HOH
349
Z
WAT
116
2
HOH
HOH
350
Z
WAT
121
2
HOH
HOH
351
Z
WAT
122
2
HOH
HOH
352
Z
WAT
123
2
HOH
HOH
353
Z
WAT
126
2
HOH
HOH
354
Z
WAT
129
2
HOH
HOH
355
Z
WAT
133
2
HOH
HOH
356
Z
WAT
142
2
HOH
HOH
357
Z
WAT
144
2
HOH
HOH
358
Z
WAT
145
2
HOH
HOH
359
Z
WAT
146
2
HOH
HOH
360
Z
n
1
146
X
n
2
147
X
n
3
148
X
n
4
149
X
n
5
150
X
n
6
151
X
n
7
152
X
n
8
153
X
n
9
154
X
n
10
155
X
n
11
156
X
n
12
157
X
n
13
158
X
n
14
159
X
n
15
160
X
n
16
161
X
GLN
162
n
17
GLN
162
X
PRO
163
n
18
PRO
163
X
PHE
164
n
19
PHE
164
X
ALA
165
n
20
ALA
165
X
HIS
166
n
21
HIS
166
X
LEU
167
n
22
LEU
167
X
THR
168
n
23
THR
168
X
ILE
169
n
24
ILE
169
X
ASN
170
n
25
ASN
170
X
ALA
171
n
26
ALA
171
X
ALA
172
n
27
ALA
172
X
SER
173
n
28
SER
173
X
ILE
174
n
29
ILE
174
X
PRO
175
n
30
PRO
175
X
SER
176
n
31
SER
176
X
GLY
177
n
32
GLY
177
X
SER
178
n
33
SER
178
X
HIS
179
n
34
HIS
179
X
LYS
180
n
35
LYS
180
X
VAL
181
n
36
VAL
181
X
THR
182
n
37
THR
182
X
LEU
183
n
38
LEU
183
X
SER
184
n
39
SER
184
X
SER
185
n
40
SER
185
X
TRP
186
n
41
TRP
186
X
TYR
187
n
42
TYR
187
X
HIS
188
n
43
HIS
188
X
ASP
189
n
44
ASP
189
X
ARG
190
n
45
ARG
190
X
GLY
191
n
46
GLY
191
X
TRP
192
n
47
TRP
192
X
ALA
193
n
48
ALA
193
X
LYS
194
n
49
LYS
194
X
ILE
195
n
50
ILE
195
X
SER
196
n
51
SER
196
X
ASN
197
n
52
ASN
197
X
MET
198
n
53
MET
198
X
THR
199
n
54
THR
199
X
LEU
200
n
55
LEU
200
X
SER
201
n
56
SER
201
X
ASN
202
n
57
ASN
202
X
GLY
203
n
58
GLY
203
X
LYS
204
n
59
LYS
204
X
LEU
205
n
60
LEU
205
X
ARG
206
n
61
ARG
206
X
VAL
207
n
62
VAL
207
X
ASN
208
n
63
ASN
208
X
GLN
209
n
64
GLN
209
X
ASP
210
n
65
ASP
210
X
GLY
211
n
66
GLY
211
X
PHE
212
n
67
PHE
212
X
TYR
213
n
68
TYR
213
X
TYR
214
n
69
TYR
214
X
LEU
215
n
70
LEU
215
X
TYR
216
n
71
TYR
216
X
ALA
217
n
72
ALA
217
X
ASN
218
n
73
ASN
218
X
ILE
219
n
74
ILE
219
X
CYS
220
n
75
CYS
220
X
PHE
221
n
76
PHE
221
X
ARG
222
n
77
ARG
222
X
HIS
223
n
78
HIS
223
X
HIS
224
n
79
HIS
224
X
GLU
225
n
80
GLU
225
X
THR
226
n
81
THR
226
X
SER
227
n
82
SER
227
X
GLY
228
n
83
GLY
228
X
SER
229
n
84
SER
229
X
VAL
230
n
85
VAL
230
X
PRO
231
n
86
PRO
231
X
THR
232
n
87
THR
232
X
ASP
233
n
88
ASP
233
X
TYR
234
n
89
TYR
234
X
LEU
235
n
90
LEU
235
X
GLN
236
n
91
GLN
236
X
LEU
237
n
92
LEU
237
X
MET
238
n
93
MET
238
X
VAL
239
n
94
VAL
239
X
TYR
240
n
95
TYR
240
X
VAL
241
n
96
VAL
241
X
VAL
242
n
97
VAL
242
X
LYS
243
n
98
LYS
243
X
THR
244
n
99
THR
244
X
SER
245
n
100
SER
245
X
ILE
246
n
101
ILE
246
X
LYS
247
n
102
LYS
247
X
ILE
248
n
103
ILE
248
X
PRO
249
n
104
PRO
249
X
SER
250
n
105
SER
250
X
SER
251
n
106
SER
251
X
HIS
252
n
107
HIS
252
X
ASN
253
n
108
ASN
253
X
LEU
254
n
109
LEU
254
X
MET
255
n
110
MET
255
X
LYS
256
n
111
LYS
256
X
GLY
257
n
112
GLY
257
X
GLY
258
n
113
GLY
258
X
SER
259
n
114
SER
259
X
THR
260
n
115
THR
260
X
LYS
261
n
116
LYS
261
X
ASN
262
n
117
ASN
262
X
TRP
263
n
118
TRP
263
X
SER
264
n
119
SER
264
X
GLY
265
n
120
GLY
265
X
ASN
266
n
121
ASN
266
X
SER
267
n
122
SER
267
X
GLU
268
n
123
GLU
268
X
PHE
269
n
124
PHE
269
X
HIS
270
n
125
HIS
270
X
PHE
271
n
126
PHE
271
X
TYR
272
n
127
TYR
272
X
SER
273
n
128
SER
273
X
ILE
274
n
129
ILE
274
X
ASN
275
n
130
ASN
275
X
VAL
276
n
131
VAL
276
X
GLY
277
n
132
GLY
277
X
GLY
278
n
133
GLY
278
X
PHE
279
n
134
PHE
279
X
PHE
280
n
135
PHE
280
X
LYS
281
n
136
LYS
281
X
LEU
282
n
137
LEU
282
X
ARG
283
n
138
ARG
283
X
ALA
284
n
139
ALA
284
X
GLY
285
n
140
GLY
285
X
GLU
286
n
141
GLU
286
X
GLU
287
n
142
GLU
287
X
ILE
288
n
143
ILE
288
X
SER
289
n
144
SER
289
X
ILE
290
n
145
ILE
290
X
GLN
291
n
146
GLN
291
X
VAL
292
n
147
VAL
292
X
SER
293
n
148
SER
293
X
ASN
294
n
149
ASN
294
X
PRO
295
n
150
PRO
295
X
SER
296
n
151
SER
296
X
LEU
297
n
152
LEU
297
X
LEU
298
n
153
LEU
298
X
ASP
299
n
154
ASP
299
X
PRO
300
n
155
PRO
300
X
ASP
301
n
156
ASP
301
X
GLN
302
n
157
GLN
302
X
ASP
303
n
158
ASP
303
X
ALA
304
n
159
ALA
304
X
THR
305
n
160
THR
305
X
TYR
306
n
161
TYR
306
X
PHE
307
n
162
PHE
307
X
GLY
308
n
163
GLY
308
X
ALA
309
n
164
ALA
309
X
PHE
310
n
165
PHE
310
X
LYS
311
n
166
LYS
311
X
VAL
312
n
167
VAL
312
X
GLN
313
n
168
GLN
313
X
ASP
314
n
169
ASP
314
X
ILE
315
n
170
ILE
315
X
ASP
316
n
171
ASP
316
X
n
1
146
Y
n
2
147
Y
n
3
148
Y
n
4
149
Y
n
5
150
Y
n
6
151
Y
n
7
152
Y
n
8
153
Y
n
9
154
Y
n
10
155
Y
n
11
156
Y
n
12
157
Y
n
13
158
Y
n
14
159
Y
n
15
160
Y
n
16
161
Y
GLN
162
n
17
GLN
162
Y
PRO
163
n
18
PRO
163
Y
PHE
164
n
19
PHE
164
Y
ALA
165
n
20
ALA
165
Y
HIS
166
n
21
HIS
166
Y
LEU
167
n
22
LEU
167
Y
THR
168
n
23
THR
168
Y
ILE
169
n
24
ILE
169
Y
ASN
170
n
25
ASN
170
Y
ALA
171
n
26
ALA
171
Y
ALA
172
n
27
ALA
172
Y
SER
173
n
28
SER
173
Y
ILE
174
n
29
ILE
174
Y
PRO
175
n
30
PRO
175
Y
SER
176
n
31
SER
176
Y
GLY
177
n
32
GLY
177
Y
SER
178
n
33
SER
178
Y
HIS
179
n
34
HIS
179
Y
LYS
180
n
35
LYS
180
Y
VAL
181
n
36
VAL
181
Y
THR
182
n
37
THR
182
Y
LEU
183
n
38
LEU
183
Y
SER
184
n
39
SER
184
Y
SER
185
n
40
SER
185
Y
TRP
186
n
41
TRP
186
Y
TYR
187
n
42
TYR
187
Y
HIS
188
n
43
HIS
188
Y
ASP
189
n
44
ASP
189
Y
ARG
190
n
45
ARG
190
Y
GLY
191
n
46
GLY
191
Y
TRP
192
n
47
TRP
192
Y
ALA
193
n
48
ALA
193
Y
LYS
194
n
49
LYS
194
Y
ILE
195
n
50
ILE
195
Y
SER
196
n
51
SER
196
Y
ASN
197
n
52
ASN
197
Y
MET
198
n
53
MET
198
Y
THR
199
n
54
THR
199
Y
LEU
200
n
55
LEU
200
Y
SER
201
n
56
SER
201
Y
ASN
202
n
57
ASN
202
Y
GLY
203
n
58
GLY
203
Y
LYS
204
n
59
LYS
204
Y
LEU
205
n
60
LEU
205
Y
ARG
206
n
61
ARG
206
Y
VAL
207
n
62
VAL
207
Y
ASN
208
n
63
ASN
208
Y
GLN
209
n
64
GLN
209
Y
ASP
210
n
65
ASP
210
Y
GLY
211
n
66
GLY
211
Y
PHE
212
n
67
PHE
212
Y
TYR
213
n
68
TYR
213
Y
TYR
214
n
69
TYR
214
Y
LEU
215
n
70
LEU
215
Y
TYR
216
n
71
TYR
216
Y
ALA
217
n
72
ALA
217
Y
ASN
218
n
73
ASN
218
Y
ILE
219
n
74
ILE
219
Y
CYS
220
n
75
CYS
220
Y
PHE
221
n
76
PHE
221
Y
ARG
222
n
77
ARG
222
Y
HIS
223
n
78
HIS
223
Y
HIS
224
n
79
HIS
224
Y
GLU
225
n
80
GLU
225
Y
THR
226
n
81
THR
226
Y
SER
227
n
82
SER
227
Y
GLY
228
n
83
GLY
228
Y
SER
229
n
84
SER
229
Y
VAL
230
n
85
VAL
230
Y
PRO
231
n
86
PRO
231
Y
THR
232
n
87
THR
232
Y
ASP
233
n
88
ASP
233
Y
TYR
234
n
89
TYR
234
Y
LEU
235
n
90
LEU
235
Y
GLN
236
n
91
GLN
236
Y
LEU
237
n
92
LEU
237
Y
MET
238
n
93
MET
238
Y
VAL
239
n
94
VAL
239
Y
TYR
240
n
95
TYR
240
Y
VAL
241
n
96
VAL
241
Y
VAL
242
n
97
VAL
242
Y
LYS
243
n
98
LYS
243
Y
THR
244
n
99
THR
244
Y
SER
245
n
100
SER
245
Y
ILE
246
n
101
ILE
246
Y
LYS
247
n
102
LYS
247
Y
ILE
248
n
103
ILE
248
Y
PRO
249
n
104
PRO
249
Y
SER
250
n
105
SER
250
Y
SER
251
n
106
SER
251
Y
HIS
252
n
107
HIS
252
Y
ASN
253
n
108
ASN
253
Y
LEU
254
n
109
LEU
254
Y
MET
255
n
110
MET
255
Y
LYS
256
n
111
LYS
256
Y
GLY
257
n
112
GLY
257
Y
GLY
258
n
113
GLY
258
Y
SER
259
n
114
SER
259
Y
THR
260
n
115
THR
260
Y
LYS
261
n
116
LYS
261
Y
ASN
262
n
117
ASN
262
Y
TRP
263
n
118
TRP
263
Y
SER
264
n
119
SER
264
Y
GLY
265
n
120
GLY
265
Y
ASN
266
n
121
ASN
266
Y
SER
267
n
122
SER
267
Y
GLU
268
n
123
GLU
268
Y
PHE
269
n
124
PHE
269
Y
HIS
270
n
125
HIS
270
Y
PHE
271
n
126
PHE
271
Y
TYR
272
n
127
TYR
272
Y
SER
273
n
128
SER
273
Y
ILE
274
n
129
ILE
274
Y
ASN
275
n
130
ASN
275
Y
VAL
276
n
131
VAL
276
Y
GLY
277
n
132
GLY
277
Y
GLY
278
n
133
GLY
278
Y
PHE
279
n
134
PHE
279
Y
PHE
280
n
135
PHE
280
Y
LYS
281
n
136
LYS
281
Y
LEU
282
n
137
LEU
282
Y
ARG
283
n
138
ARG
283
Y
ALA
284
n
139
ALA
284
Y
GLY
285
n
140
GLY
285
Y
GLU
286
n
141
GLU
286
Y
GLU
287
n
142
GLU
287
Y
ILE
288
n
143
ILE
288
Y
SER
289
n
144
SER
289
Y
ILE
290
n
145
ILE
290
Y
GLN
291
n
146
GLN
291
Y
VAL
292
n
147
VAL
292
Y
SER
293
n
148
SER
293
Y
ASN
294
n
149
ASN
294
Y
PRO
295
n
150
PRO
295
Y
SER
296
n
151
SER
296
Y
LEU
297
n
152
LEU
297
Y
LEU
298
n
153
LEU
298
Y
ASP
299
n
154
ASP
299
Y
PRO
300
n
155
PRO
300
Y
ASP
301
n
156
ASP
301
Y
GLN
302
n
157
GLN
302
Y
ASP
303
n
158
ASP
303
Y
ALA
304
n
159
ALA
304
Y
THR
305
n
160
THR
305
Y
TYR
306
n
161
TYR
306
Y
PHE
307
n
162
PHE
307
Y
GLY
308
n
163
GLY
308
Y
ALA
309
n
164
ALA
309
Y
PHE
310
n
165
PHE
310
Y
LYS
311
n
166
LYS
311
Y
VAL
312
n
167
VAL
312
Y
GLN
313
n
168
GLN
313
Y
ASP
314
n
169
ASP
314
Y
ILE
315
n
170
ILE
315
Y
ASP
316
n
171
ASP
316
Y
n
1
146
Z
n
2
147
Z
n
3
148
Z
n
4
149
Z
n
5
150
Z
n
6
151
Z
n
7
152
Z
n
8
153
Z
n
9
154
Z
n
10
155
Z
n
11
156
Z
n
12
157
Z
n
13
158
Z
n
14
159
Z
n
15
160
Z
n
16
161
Z
GLN
162
n
17
GLN
162
Z
PRO
163
n
18
PRO
163
Z
PHE
164
n
19
PHE
164
Z
ALA
165
n
20
ALA
165
Z
HIS
166
n
21
HIS
166
Z
LEU
167
n
22
LEU
167
Z
THR
168
n
23
THR
168
Z
ILE
169
n
24
ILE
169
Z
ASN
170
n
25
ASN
170
Z
ALA
171
n
26
ALA
171
Z
ALA
172
n
27
ALA
172
Z
SER
173
n
28
SER
173
Z
ILE
174
n
29
ILE
174
Z
PRO
175
n
30
PRO
175
Z
SER
176
n
31
SER
176
Z
GLY
177
n
32
GLY
177
Z
SER
178
n
33
SER
178
Z
HIS
179
n
34
HIS
179
Z
LYS
180
n
35
LYS
180
Z
VAL
181
n
36
VAL
181
Z
THR
182
n
37
THR
182
Z
LEU
183
n
38
LEU
183
Z
SER
184
n
39
SER
184
Z
SER
185
n
40
SER
185
Z
TRP
186
n
41
TRP
186
Z
TYR
187
n
42
TYR
187
Z
HIS
188
n
43
HIS
188
Z
ASP
189
n
44
ASP
189
Z
ARG
190
n
45
ARG
190
Z
GLY
191
n
46
GLY
191
Z
TRP
192
n
47
TRP
192
Z
ALA
193
n
48
ALA
193
Z
LYS
194
n
49
LYS
194
Z
ILE
195
n
50
ILE
195
Z
SER
196
n
51
SER
196
Z
ASN
197
n
52
ASN
197
Z
MET
198
n
53
MET
198
Z
THR
199
n
54
THR
199
Z
LEU
200
n
55
LEU
200
Z
SER
201
n
56
SER
201
Z
ASN
202
n
57
ASN
202
Z
GLY
203
n
58
GLY
203
Z
LYS
204
n
59
LYS
204
Z
LEU
205
n
60
LEU
205
Z
ARG
206
n
61
ARG
206
Z
VAL
207
n
62
VAL
207
Z
ASN
208
n
63
ASN
208
Z
GLN
209
n
64
GLN
209
Z
ASP
210
n
65
ASP
210
Z
GLY
211
n
66
GLY
211
Z
PHE
212
n
67
PHE
212
Z
TYR
213
n
68
TYR
213
Z
TYR
214
n
69
TYR
214
Z
LEU
215
n
70
LEU
215
Z
TYR
216
n
71
TYR
216
Z
ALA
217
n
72
ALA
217
Z
ASN
218
n
73
ASN
218
Z
ILE
219
n
74
ILE
219
Z
CYS
220
n
75
CYS
220
Z
PHE
221
n
76
PHE
221
Z
ARG
222
n
77
ARG
222
Z
HIS
223
n
78
HIS
223
Z
HIS
224
n
79
HIS
224
Z
GLU
225
n
80
GLU
225
Z
THR
226
n
81
THR
226
Z
SER
227
n
82
SER
227
Z
GLY
228
n
83
GLY
228
Z
SER
229
n
84
SER
229
Z
VAL
230
n
85
VAL
230
Z
PRO
231
n
86
PRO
231
Z
THR
232
n
87
THR
232
Z
ASP
233
n
88
ASP
233
Z
TYR
234
n
89
TYR
234
Z
LEU
235
n
90
LEU
235
Z
GLN
236
n
91
GLN
236
Z
LEU
237
n
92
LEU
237
Z
MET
238
n
93
MET
238
Z
VAL
239
n
94
VAL
239
Z
TYR
240
n
95
TYR
240
Z
VAL
241
n
96
VAL
241
Z
VAL
242
n
97
VAL
242
Z
LYS
243
n
98
LYS
243
Z
THR
244
n
99
THR
244
Z
SER
245
n
100
SER
245
Z
ILE
246
n
101
ILE
246
Z
LYS
247
n
102
LYS
247
Z
ILE
248
n
103
ILE
248
Z
PRO
249
n
104
PRO
249
Z
SER
250
n
105
SER
250
Z
SER
251
n
106
SER
251
Z
HIS
252
n
107
HIS
252
Z
ASN
253
n
108
ASN
253
Z
LEU
254
n
109
LEU
254
Z
MET
255
n
110
MET
255
Z
LYS
256
n
111
LYS
256
Z
GLY
257
n
112
GLY
257
Z
GLY
258
n
113
GLY
258
Z
SER
259
n
114
SER
259
Z
THR
260
n
115
THR
260
Z
LYS
261
n
116
LYS
261
Z
ASN
262
n
117
ASN
262
Z
TRP
263
n
118
TRP
263
Z
SER
264
n
119
SER
264
Z
GLY
265
n
120
GLY
265
Z
ASN
266
n
121
ASN
266
Z
SER
267
n
122
SER
267
Z
GLU
268
n
123
GLU
268
Z
PHE
269
n
124
PHE
269
Z
HIS
270
n
125
HIS
270
Z
PHE
271
n
126
PHE
271
Z
TYR
272
n
127
TYR
272
Z
SER
273
n
128
SER
273
Z
ILE
274
n
129
ILE
274
Z
ASN
275
n
130
ASN
275
Z
VAL
276
n
131
VAL
276
Z
GLY
277
n
132
GLY
277
Z
GLY
278
n
133
GLY
278
Z
PHE
279
n
134
PHE
279
Z
PHE
280
n
135
PHE
280
Z
LYS
281
n
136
LYS
281
Z
LEU
282
n
137
LEU
282
Z
ARG
283
n
138
ARG
283
Z
ALA
284
n
139
ALA
284
Z
GLY
285
n
140
GLY
285
Z
GLU
286
n
141
GLU
286
Z
GLU
287
n
142
GLU
287
Z
ILE
288
n
143
ILE
288
Z
SER
289
n
144
SER
289
Z
ILE
290
n
145
ILE
290
Z
GLN
291
n
146
GLN
291
Z
VAL
292
n
147
VAL
292
Z
SER
293
n
148
SER
293
Z
ASN
294
n
149
ASN
294
Z
PRO
295
n
150
PRO
295
Z
SER
296
n
151
SER
296
Z
LEU
297
n
152
LEU
297
Z
LEU
298
n
153
LEU
298
Z
ASP
299
n
154
ASP
299
Z
PRO
300
n
155
PRO
300
Z
ASP
301
n
156
ASP
301
Z
GLN
302
n
157
GLN
302
Z
ASP
303
n
158
ASP
303
Z
ALA
304
n
159
ALA
304
Z
THR
305
n
160
THR
305
Z
TYR
306
n
161
TYR
306
Z
PHE
307
n
162
PHE
307
Z
GLY
308
n
163
GLY
308
Z
ALA
309
n
164
ALA
309
Z
PHE
310
n
165
PHE
310
Z
LYS
311
n
166
LYS
311
Z
VAL
312
n
167
VAL
312
Z
GLN
313
n
168
GLN
313
Z
ASP
314
n
169
ASP
314
Z
ILE
315
n
170
ILE
315
Z
ASP
316
n
171
ASP
316
Z
author_and_software_defined_assembly
PISA
3
trimeric
6160
-21
17490
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
X
O
PHE
280
A
O
PHE
135
X
N
TYR
213
A
N
TYR
68
X
N
ASN
218
A
N
ASN
73
X
O
TYR
306
A
O
TYR
161
X
O
ALA
309
A
O
ALA
164
X
N
ALA
165
A
N
ALA
20
X
O
PHE
280
A
O
PHE
135
X
N
TYR
213
A
N
TYR
68
X
N
ASN
218
A
N
ASN
73
X
O
TYR
306
A
O
TYR
161
X
O
ALA
309
A
O
ALA
164
X
N
ALA
165
A
N
ALA
20
X
O
HIS
252
A
O
HIS
107
X
N
LYS
243
A
N
LYS
98
X
N
TYR
240
A
N
TYR
95
X
O
GLN
291
A
O
GLN
146
X
O
HIS
252
A
O
HIS
107
X
N
LYS
243
A
N
LYS
98
X
N
TYR
240
A
N
TYR
95
X
O
GLN
291
A
O
GLN
146
X
O
ARG
206
A
O
ARG
61
X
N
THR
199
A
N
THR
54
Y
O
SER
196
B
O
SER
51
Y
N
PHE
164
B
N
PHE
19
Y
N
LEU
167
B
N
LEU
22
Y
O
PHE
307
B
O
PHE
162
Y
O
VAL
312
B
O
VAL
167
Y
N
PHE
212
B
N
PHE
67
Y
N
HIS
223
B
N
HIS
78
Y
O
HIS
270
B
O
HIS
125
Y
O
LEU
254
B
O
LEU
109
Y
N
VAL
241
B
N
VAL
96
Y
N
VAL
242
B
N
VAL
97
Y
O
SER
289
B
O
SER
144
Y
O
LEU
254
B
O
LEU
109
Y
N
VAL
241
B
N
VAL
96
Y
N
VAL
242
B
N
VAL
97
Y
O
SER
289
B
O
SER
144
Y
O
ARG
206
B
O
ARG
61
Y
N
THR
199
B
N
THR
54
Z
O
PHE
280
C
O
PHE
135
Z
N
TYR
213
C
N
TYR
68
Z
N
ASN
218
C
N
ASN
73
Z
O
TYR
306
C
O
TYR
161
Z
O
ALA
309
C
O
ALA
164
Z
N
ALA
165
C
N
ALA
20
Z
O
PHE
280
C
O
PHE
135
Z
N
TYR
213
C
N
TYR
68
Z
N
ASN
218
C
N
ASN
73
Z
O
TYR
306
C
O
TYR
161
Z
O
ALA
309
C
O
ALA
164
Z
N
ALA
165
C
N
ALA
20
Z
O
HIS
252
C
O
HIS
107
Z
N
LYS
243
C
N
LYS
98
Z
N
TYR
240
C
N
TYR
95
Z
O
GLN
291
C
O
GLN
146
Z
O
HIS
252
C
O
HIS
107
Z
N
LYS
243
C
N
LYS
98
Z
N
TYR
240
C
N
TYR
95
Z
O
GLN
291
C
O
GLN
146
Z
O
ARG
206
C
O
ARG
61
Z
N
THR
199
C
N
THR
54
1
X
GLY
146
A
GLY
1
1
Y
1
X
PRO
147
A
PRO
2
1
Y
1
X
LEU
148
A
LEU
3
1
Y
1
X
GLY
149
A
GLY
4
1
Y
1
X
SER
150
A
SER
5
1
Y
1
X
PRO
151
A
PRO
6
1
Y
1
X
GLU
152
A
GLU
7
1
Y
1
X
PHE
153
A
PHE
8
1
Y
1
X
PRO
154
A
PRO
9
1
Y
1
X
ARG
155
A
ARG
10
1
Y
1
X
ARG
156
A
ARG
11
1
Y
1
X
GLY
157
A
GLY
12
1
Y
1
X
LYS
158
A
LYS
13
1
Y
1
X
PRO
159
A
PRO
14
1
Y
1
X
GLU
160
A
GLU
15
1
Y
1
X
ALA
161
A
ALA
16
1
Y
1
Y
GLY
146
B
GLY
1
1
Y
1
Y
PRO
147
B
PRO
2
1
Y
1
Y
LEU
148
B
LEU
3
1
Y
1
Y
GLY
149
B
GLY
4
1
Y
1
Y
SER
150
B
SER
5
1
Y
1
Y
PRO
151
B
PRO
6
1
Y
1
Y
GLU
152
B
GLU
7
1
Y
1
Y
PHE
153
B
PHE
8
1
Y
1
Y
PRO
154
B
PRO
9
1
Y
1
Y
ARG
155
B
ARG
10
1
Y
1
Y
ARG
156
B
ARG
11
1
Y
1
Y
GLY
157
B
GLY
12
1
Y
1
Y
LYS
158
B
LYS
13
1
Y
1
Y
PRO
159
B
PRO
14
1
Y
1
Y
GLU
160
B
GLU
15
1
Y
1
Y
ALA
161
B
ALA
16
1
Y
1
Z
GLY
146
C
GLY
1
1
Y
1
Z
PRO
147
C
PRO
2
1
Y
1
Z
LEU
148
C
LEU
3
1
Y
1
Z
GLY
149
C
GLY
4
1
Y
1
Z
SER
150
C
SER
5
1
Y
1
Z
PRO
151
C
PRO
6
1
Y
1
Z
GLU
152
C
GLU
7
1
Y
1
Z
PHE
153
C
PHE
8
1
Y
1
Z
PRO
154
C
PRO
9
1
Y
1
Z
ARG
155
C
ARG
10
1
Y
1
Z
ARG
156
C
ARG
11
1
Y
1
Z
GLY
157
C
GLY
12
1
Y
1
Z
LYS
158
C
LYS
13
1
Y
1
Z
PRO
159
C
PRO
14
1
Y
1
Z
GLU
160
C
GLU
15
1
Y
1
Z
ALA
161
C
ALA
16
1
Y
1
15.64
1.50
119.30
134.94
Y
Y
Y
C
N
CA
ILE
PRO
PRO
248
249
249
Y
1
-13.48
2.10
128.40
114.92
Y
Y
Y
C
N
CD
ILE
PRO
PRO
248
249
249
Y
1
X
ALA
172
-38.14
-35.53
1
X
ASP
189
-133.96
-35.50
1
X
ASN
197
87.94
-64.02
1
X
THR
232
174.57
131.25
1
X
PRO
249
-62.03
2.59
1
Y
ALA
165
-174.44
136.60
1
Y
SER
173
-113.66
75.11
1
Y
PRO
175
-69.63
-145.10
1
Y
HIS
179
-44.74
150.45
1
Y
HIS
188
-153.54
13.43
1
Y
ASP
189
-141.70
-26.45
1
Y
ASN
197
90.78
-70.46
1
Y
GLU
225
-47.38
-17.61
1
Y
SER
227
-91.76
40.77
1
Y
ASP
233
-10.88
-70.41
1
Y
LYS
247
-61.98
12.58
1
Y
ILE
248
153.04
83.77
1
Y
PRO
249
-42.81
47.01
1
Y
ASN
266
-53.23
96.42
1
Z
PHE
164
174.37
159.48
1
Z
PRO
175
-73.95
-140.53
1
Z
SER
176
-170.34
134.26
1
Z
HIS
188
-150.36
27.65
1
Z
ASP
189
-146.69
-55.37
1
Z
ASN
197
72.48
-67.97
1
Z
THR
232
-163.46
-130.22
1
Z
ILE
248
-160.15
102.65
1
Z
PRO
249
-57.76
-2.71
1
Z
SER
264
-86.37
-151.59
1
Z
SER
267
123.38
138.63
1
Z
TYR
272
-172.00
125.44
1
Z
GLN
313
-170.60
146.34
PROTEIN_REP.PARAM
PROTEIN.TOP
WATER_REP.PARAM
WATER.TOP
69.0
-6.16
0.00
0.00
19.96
0.00
-13.80
The following residues were included in 5 groups
NCS GROUP 1:162-171,180-223,235-244,252-263,269-316
NCS GROUP 2:172-179
NCS GROUP 3:224-233
NCS GROUP 4:245-251
NCS GROUP 5:264-268
NOTES: Residues included in groups 1-5
(RMS for monomer X versus monomer Y) is
identical to groups 6-10 (RMS for monomer
X versus monomer Z)
0.286
0.010
0.235
0.235
2.60
20.0
781
16018
4.9
94.4
RANDOM
53633.89
0.000000
1
RESTRAINED
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
CHIMERA OF PDB ENTRIES 1TNR (CHAIN A) AND 1D4V (CHAIN B)
MLF
FLAT MODEL
36.7347
0.260869
0.48
0.37
6.00
0.62
0.43
2.60
20.0
147
3831
0
0
3684
0.008
1.3
25.5
0.86
1.82
1.50
3.27
2.00
1.56
2.00
2.58
2.50
1
NCS CONSTRAINED USING FIVE GROUPS
1
X-RAY DIFFRACTION
0.3500
10
2
GROUPS 1-5 RMS FOR X COMPARED TO Y
2
X-RAY DIFFRACTION
0.8491
2
3
GROUPS 6-10 RMS FOR X COMPARED TO Z
3
X-RAY DIFFRACTION
1.1252
2
4
4
X-RAY DIFFRACTION
1.1133
2
5
5
X-RAY DIFFRACTION
1.6253
2
6
6
X-RAY DIFFRACTION
0.3269
10
7
7
X-RAY DIFFRACTION
0.8817
2
8
8
X-RAY DIFFRACTION
0.7802
2
9
9
X-RAY DIFFRACTION
0.7380
2
10
10
X-RAY DIFFRACTION
1.4771
2
0.44
0.046
0.39
2.72
93
1765
8
5.0
89.2
70.2
2.6
20.0
1JTZ
191355
16705
0
-3.0
0.059
1
32.3
11.5
98.2
2.60
2.72
4.7
0.449
11.5
100
data reduction
DENZO
data scaling
SCALEPACK
phasing
AMoRE
refinement
CNS
1.0
CRYSTAL STRUCTURE OF TRANCE/RANKL CYTOKINE.
1
N
N
1
N
N
1
N
N
2
N
N
2
N
N
2
N
N
THE BIOLOGICAL ASSEMBLY IS A TRIMER WHICH COMPRISES THE
ASYMETRIC UNIT.
X
THR
226
A
THR
81
HELX_P
X
GLY
228
A
GLY
83
5
1
3
X
ASN
294
A
ASN
149
HELX_P
X
LEU
298
A
LEU
153
5
2
5
Y
THR
226
B
THR
81
HELX_P
Y
GLY
228
B
GLY
83
5
3
3
Y
ASN
294
B
ASN
149
HELX_P
Y
LEU
298
B
LEU
153
5
4
5
Z
THR
226
C
THR
81
HELX_P
Z
GLY
228
C
GLY
83
5
5
3
Z
ASN
294
C
ASN
149
HELX_P
Z
LEU
298
C
LEU
153
5
6
5
CYTOKINE
TUMOR NECROSIS FACTOR SUPERFAMILY MEMBER, JELLYROLL, BETA-SANDWICH, CYTOKINE
TNF11_MOUSE
UNP
1
156
O35235
RGKPEAQPFAHLTINAASIPSGSHKVTLSSWYHDRGWAKISNMTLSNGKLRVNQDGFYYLYANICFRHHETSGSVPTDYL
QLMVYVVKTSIKIPSSHNLMKGGSTKNWSGNSEFHFYSINVGGFFKLRAGEEISIQVSNPSLLDPDQDATYFGAFKVQDI
D
156
316
1JTZ
156
316
O35235
X
1
11
171
156
316
1JTZ
156
316
O35235
Y
1
11
171
156
316
1JTZ
156
316
O35235
Z
1
11
171
1
cloning artifact
GLY
146
1JTZ
X
O35235
UNP
1
1
cloning artifact
PRO
147
1JTZ
X
O35235
UNP
2
1
cloning artifact
LEU
148
1JTZ
X
O35235
UNP
3
1
cloning artifact
GLY
149
1JTZ
X
O35235
UNP
4
1
cloning artifact
SER
150
1JTZ
X
O35235
UNP
5
1
cloning artifact
PRO
151
1JTZ
X
O35235
UNP
6
1
cloning artifact
GLU
152
1JTZ
X
O35235
UNP
7
1
cloning artifact
PHE
153
1JTZ
X
O35235
UNP
8
1
cloning artifact
PRO
154
1JTZ
X
O35235
UNP
9
1
cloning artifact
ARG
155
1JTZ
X
O35235
UNP
10
2
cloning artifact
GLY
146
1JTZ
Y
O35235
UNP
1
2
cloning artifact
PRO
147
1JTZ
Y
O35235
UNP
2
2
cloning artifact
LEU
148
1JTZ
Y
O35235
UNP
3
2
cloning artifact
GLY
149
1JTZ
Y
O35235
UNP
4
2
cloning artifact
SER
150
1JTZ
Y
O35235
UNP
5
2
cloning artifact
PRO
151
1JTZ
Y
O35235
UNP
6
2
cloning artifact
GLU
152
1JTZ
Y
O35235
UNP
7
2
cloning artifact
PHE
153
1JTZ
Y
O35235
UNP
8
2
cloning artifact
PRO
154
1JTZ
Y
O35235
UNP
9
2
cloning artifact
ARG
155
1JTZ
Y
O35235
UNP
10
3
cloning artifact
GLY
146
1JTZ
Z
O35235
UNP
1
3
cloning artifact
PRO
147
1JTZ
Z
O35235
UNP
2
3
cloning artifact
LEU
148
1JTZ
Z
O35235
UNP
3
3
cloning artifact
GLY
149
1JTZ
Z
O35235
UNP
4
3
cloning artifact
SER
150
1JTZ
Z
O35235
UNP
5
3
cloning artifact
PRO
151
1JTZ
Z
O35235
UNP
6
3
cloning artifact
GLU
152
1JTZ
Z
O35235
UNP
7
3
cloning artifact
PHE
153
1JTZ
Z
O35235
UNP
8
3
cloning artifact
PRO
154
1JTZ
Z
O35235
UNP
9
3
cloning artifact
ARG
155
1JTZ
Z
O35235
UNP
10
5
5
4
5
5
4
5
5
5
4
5
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
X
PHE
269
A
PHE
124
X
LEU
282
A
LEU
137
X
GLY
211
A
GLY
66
X
HIS
224
A
HIS
79
X
TYR
306
A
TYR
161
X
GLN
313
A
GLN
168
X
PHE
164
A
PHE
19
X
ILE
169
A
ILE
24
X
TRP
186
A
TRP
41
X
TYR
187
A
TYR
42
X
PHE
269
A
PHE
124
X
LEU
282
A
LEU
137
X
GLY
211
A
GLY
66
X
HIS
224
A
HIS
79
X
TYR
306
A
TYR
161
X
GLN
313
A
GLN
168
X
PHE
164
A
PHE
19
X
ILE
169
A
ILE
24
X
LYS
194
A
LYS
49
X
SER
196
A
SER
51
X
SER
251
A
SER
106
X
ASN
262
A
ASN
117
X
TYR
234
A
TYR
89
X
SER
245
A
SER
100
X
GLU
286
A
GLU
141
X
VAL
292
A
VAL
147
X
VAL
181
A
VAL
36
X
LEU
183
A
LEU
38
X
SER
251
A
SER
106
X
ASN
262
A
ASN
117
X
TYR
234
A
TYR
89
X
SER
245
A
SER
100
X
GLU
286
A
GLU
141
X
VAL
292
A
VAL
147
X
LEU
205
A
LEU
60
X
ARG
206
A
ARG
61
X
THR
199
A
THR
54
X
LEU
200
A
LEU
55
Y
LYS
194
B
LYS
49
Y
SER
196
B
SER
51
Y
PHE
164
B
PHE
19
Y
THR
168
B
THR
23
Y
TYR
306
B
TYR
161
Y
ASP
314
B
ASP
169
Y
GLY
211
B
GLY
66
Y
HIS
224
B
HIS
79
Y
PHE
269
B
PHE
124
Y
LEU
282
B
LEU
137
Y
SER
251
B
SER
106
Y
ASN
262
B
ASN
117
Y
TYR
234
B
TYR
89
Y
THR
244
B
THR
99
Y
GLU
287
B
GLU
142
Y
VAL
292
B
VAL
147
Y
VAL
181
B
VAL
36
Y
LEU
183
B
LEU
38
Y
SER
251
B
SER
106
Y
ASN
262
B
ASN
117
Y
TYR
234
B
TYR
89
Y
THR
244
B
THR
99
Y
GLU
287
B
GLU
142
Y
VAL
292
B
VAL
147
Y
LYS
204
B
LYS
59
Y
ARG
206
B
ARG
61
Y
THR
199
B
THR
54
Y
LEU
200
B
LEU
55
Z
PHE
269
C
PHE
124
Z
LEU
282
C
LEU
137
Z
GLY
211
C
GLY
66
Z
HIS
224
C
HIS
79
Z
TYR
306
C
TYR
161
Z
GLN
313
C
GLN
168
Z
PHE
164
C
PHE
19
Z
ILE
169
C
ILE
24
Z
TRP
186
C
TRP
41
Z
TYR
187
C
TYR
42
Z
PHE
269
C
PHE
124
Z
LEU
282
C
LEU
137
Z
GLY
211
C
GLY
66
Z
HIS
224
C
HIS
79
Z
TYR
306
C
TYR
161
Z
GLN
313
C
GLN
168
Z
PHE
164
C
PHE
19
Z
ILE
169
C
ILE
24
Z
LYS
194
C
LYS
49
Z
SER
196
C
SER
51
Z
SER
251
C
SER
106
Z
ASN
262
C
ASN
117
Z
TYR
234
C
TYR
89
Z
THR
244
C
THR
99
Z
GLU
287
C
GLU
142
Z
VAL
292
C
VAL
147
Z
VAL
181
C
VAL
36
Z
LEU
183
C
LEU
38
Z
SER
251
C
SER
106
Z
ASN
262
C
ASN
117
Z
TYR
234
C
TYR
89
Z
THR
244
C
THR
99
Z
GLU
287
C
GLU
142
Z
VAL
292
C
VAL
147
Z
LEU
205
C
LEU
60
Z
ARG
206
C
ARG
61
Z
THR
199
C
THR
54
Z
LEU
200
C
LEU
55
19
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