1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Zhang, N.
Gorin, A.
Majumdar, A.
Kettani, A.
Chernichenko, N.
Skripkin, E.
Patel, D.J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
312
1073
1088
10.1006/jmbi.2001.5002
11580251
Dimeric DNA quadruplex containing major groove-aligned A-T-A-T and G-C-G-C tetrads stabilized by inter-subunit Watson-Crick A-T and G-C pairs.
2001
10.2210/pdb1jvc/pdb
pdb_00001jvc
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
1
1.0
2491.654
5'-D(*GP*AP*GP*CP*AP*GP*GP*T)-3'
2
syn
polymer
no
no
(DG)(DA)(DG)(DC)(DA)(DG)(DG)(DT)
GAGCAGGT
A,B
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
-5.424
1
20
A
2
B
8
-3.119
A_DA2:DT8_B
1
-11.853
-1.017
0.634
-0.769
1.245
3
6
A
3
B
7
95.763
A_DG3:DG7_B
2
-8.097
-0.301
0.004
-3.941
-1.244
3
6
A
7
B
3
-95.583
A_DG7:DG3_B
3
8.105
0.302
-0.057
3.936
-6.742
1
19
A
6
B
4
-12.865
A_DG6:DC4_B
4
5.930
0.191
-0.460
-0.165
-6.794
1
19
B
6
A
4
-12.982
B_DG6:DC4_A
5
5.893
0.188
-0.407
-0.156
-5.449
1
20
A
8
B
2
2.983
A_DT8:DA2_B
6
-11.875
-1.008
-0.580
-0.767
-0.014
-175.179
A
A
2
3
-2.718
B
B
8
7
1.343
5.387
-1.987
-3.064
AA_DA2DG3:DG7DT8_BB
1
-171.674
-86.614
-108.349
1.527
-1.209
0.001
179.990
A
A
3
7
0.278
B
B
7
3
0.001
0.555
-0.749
-3.853
AA_DG3DG7:DG3DG7_BB
2
-5.414
2.707
179.990
-1.926
0.374
-2.868
-66.249
A
A
7
6
3.370
B
B
3
4
-2.985
-3.681
-0.826
2.087
AA_DG7DG6:DC4DG3_BB
3
0.953
0.873
-66.152
-2.041
-0.790
0.002
179.980
A
B
6
6
0.452
B
A
4
4
0.002
0.904
0.729
-5.910
AB_DG6DG6:DC4DC4_AB
4
2.450
-1.225
179.980
-2.955
-0.365
database_2
pdbx_struct_assembly
pdbx_struct_oper_list
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
1
0
2001-10-24
1
1
2008-04-27
1
2
2011-07-13
1
3
2022-02-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
RCSB
Y
RCSB
2001-08-29
REL
back calculated data agree with experimental NOESY spectrum
60
10
2D NOESY, COSY, TOCSY
1M NaCl, 2mM phosphate
6.6
1
atm
273
K
described in the primary citation
molecular dynamics with
simulated annealing method
in torsional space
1
lowest energy
1M NaCl, 2mM phosphate
H2O, D2O
A. Brunger
refinement
X-PLOR
3.81
600
Varian
UNITY
G
1
n
1
DG
1
A
A
2
n
2
DA
2
A
G
3
n
3
DG
3
A
C
4
n
4
DC
4
A
A
5
n
5
DA
5
A
G
6
n
6
DG
6
A
G
7
n
7
DG
7
A
T
8
n
8
DT
8
A
G
1
n
1
DG
1
B
A
2
n
2
DA
2
B
G
3
n
3
DG
3
B
C
4
n
4
DC
4
B
A
5
n
5
DA
5
B
G
6
n
6
DG
6
B
G
7
n
7
DG
7
B
T
8
n
8
DT
8
B
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
-6.22
0.70
102.20
95.98
A
A
A
C4'
C3'
C2'
DG
DG
DG
1
1
1
N
1
2.03
0.30
108.30
110.33
A
A
A
O4'
C1'
N9
DG
DG
DG
1
1
1
N
1
-2.72
0.40
104.50
101.78
A
A
A
O4'
C4'
C3'
DA
DA
DA
2
2
2
N
1
-6.26
1.00
110.10
103.84
A
A
A
C1'
O4'
C4'
DA
DA
DA
2
2
2
N
1
-9.04
0.70
108.00
98.96
A
A
A
O4'
C1'
N9
DA
DA
DA
2
2
2
N
1
-3.35
0.40
104.50
101.15
A
A
A
O4'
C4'
C3'
DG
DG
DG
3
3
3
N
1
-7.28
1.00
110.10
102.82
A
A
A
C1'
O4'
C4'
DG
DG
DG
3
3
3
N
1
-6.29
0.40
104.50
98.21
A
A
A
O4'
C4'
C3'
DC
DC
DC
4
4
4
N
1
8.21
1.10
109.80
118.01
A
A
A
C5'
C4'
O4'
DC
DC
DC
4
4
4
N
1
12.06
2.00
112.30
124.36
A
A
A
C4'
C3'
O3'
DC
DC
DC
4
4
4
N
1
-5.13
0.80
105.90
100.77
A
A
A
O4'
C1'
C2'
DC
DC
DC
4
4
4
N
1
6.57
0.30
108.30
114.87
A
A
A
O4'
C1'
N1
DC
DC
DC
4
4
4
N
1
4.55
0.60
118.90
123.45
A
A
A
N1
C2
O2
DC
DC
DC
4
4
4
N
1
-7.15
1.00
110.10
102.95
A
A
A
C1'
O4'
C4'
DA
DA
DA
5
5
5
N
1
11.12
0.30
108.30
119.42
A
A
A
O4'
C1'
N9
DA
DA
DA
5
5
5
N
1
-12.16
0.80
105.90
93.74
A
A
A
O4'
C1'
C2'
DG
DG
DG
6
6
6
N
1
-4.03
0.60
128.60
124.57
A
A
A
C5
C6
O6
DG
DG
DG
6
6
6
N
1
-4.30
0.70
102.20
97.90
A
A
A
C4'
C3'
C2'
DG
DG
DG
7
7
7
N
1
-12.54
0.80
105.90
93.36
A
A
A
O4'
C1'
C2'
DG
DG
DG
7
7
7
N
1
7.64
0.30
108.30
115.94
A
A
A
O4'
C1'
N9
DG
DG
DG
7
7
7
N
1
-5.44
0.60
122.90
117.46
A
A
A
C6
C5
C7
DT
DT
DT
8
8
8
N
1
-6.26
0.70
102.20
95.94
B
B
B
C4'
C3'
C2'
DG
DG
DG
1
1
1
N
1
2.01
0.30
108.30
110.31
B
B
B
O4'
C1'
N9
DG
DG
DG
1
1
1
N
1
-2.63
0.40
104.50
101.87
B
B
B
O4'
C4'
C3'
DA
DA
DA
2
2
2
N
1
-6.30
1.00
110.10
103.80
B
B
B
C1'
O4'
C4'
DA
DA
DA
2
2
2
N
1
-9.00
0.70
108.00
99.00
B
B
B
O4'
C1'
N9
DA
DA
DA
2
2
2
N
1
-3.31
0.40
104.50
101.19
B
B
B
O4'
C4'
C3'
DG
DG
DG
3
3
3
N
1
-7.29
1.00
110.10
102.81
B
B
B
C1'
O4'
C4'
DG
DG
DG
3
3
3
N
1
-6.28
0.40
104.50
98.22
B
B
B
O4'
C4'
C3'
DC
DC
DC
4
4
4
N
1
8.12
1.10
109.80
117.92
B
B
B
C5'
C4'
O4'
DC
DC
DC
4
4
4
N
1
12.09
2.00
112.30
124.39
B
B
B
C4'
C3'
O3'
DC
DC
DC
4
4
4
N
1
-5.10
0.80
105.90
100.80
B
B
B
O4'
C1'
C2'
DC
DC
DC
4
4
4
N
1
6.58
0.30
108.30
114.88
B
B
B
O4'
C1'
N1
DC
DC
DC
4
4
4
N
1
4.49
0.60
118.90
123.39
B
B
B
N1
C2
O2
DC
DC
DC
4
4
4
N
1
-7.09
1.00
110.10
103.01
B
B
B
C1'
O4'
C4'
DA
DA
DA
5
5
5
N
1
11.11
0.30
108.30
119.41
B
B
B
O4'
C1'
N9
DA
DA
DA
5
5
5
N
1
-12.14
0.80
105.90
93.76
B
B
B
O4'
C1'
C2'
DG
DG
DG
6
6
6
N
1
-3.99
0.60
128.60
124.61
B
B
B
C5
C6
O6
DG
DG
DG
6
6
6
N
1
-4.26
0.70
102.20
97.94
B
B
B
C4'
C3'
C2'
DG
DG
DG
7
7
7
N
1
-12.47
0.80
105.90
93.43
B
B
B
O4'
C1'
C2'
DG
DG
DG
7
7
7
N
1
7.59
0.30
108.30
115.89
B
B
B
O4'
C1'
N9
DG
DG
DG
7
7
7
N
1
-5.41
0.60
122.90
117.49
B
B
B
C6
C5
C7
DT
DT
DT
8
8
8
N
2
-6.10
0.70
102.20
96.10
A
A
A
C4'
C3'
C2'
DG
DG
DG
1
1
1
N
2
-2.75
0.40
104.50
101.75
A
A
A
O4'
C4'
C3'
DA
DA
DA
2
2
2
N
2
-6.09
1.00
110.10
104.01
A
A
A
C1'
O4'
C4'
DA
DA
DA
2
2
2
N
2
-8.91
0.70
108.00
99.09
A
A
A
O4'
C1'
N9
DA
DA
DA
2
2
2
N
2
-3.15
0.40
104.50
101.35
A
A
A
O4'
C4'
C3'
DG
DG
DG
3
3
3
N
2
-7.23
1.00
110.10
102.87
A
A
A
C1'
O4'
C4'
DG
DG
DG
3
3
3
N
2
-5.93
0.40
104.50
98.57
A
A
A
O4'
C4'
C3'
DC
DC
DC
4
4
4
N
2
7.66
1.10
109.80
117.46
A
A
A
C5'
C4'
O4'
DC
DC
DC
4
4
4
N
2
13.55
2.00
112.30
125.85
A
A
A
C4'
C3'
O3'
DC
DC
DC
4
4
4
N
2
-5.36
0.80
105.90
100.54
A
A
A
O4'
C1'
C2'
DC
DC
DC
4
4
4
N
2
7.00
0.30
108.30
115.30
A
A
A
O4'
C1'
N1
DC
DC
DC
4
4
4
N
2
5.11
0.60
118.90
124.01
A
A
A
N1
C2
O2
DC
DC
DC
4
4
4
N
2
2.94
0.30
108.30
111.24
A
A
A
O4'
C1'
N9
DA
DA
DA
5
5
5
N
2
10.40
1.20
119.70
130.10
A
A
A
C3'
O3'
P
DA
DA
DG
5
5
6
Y
2
-12.01
0.80
105.90
93.89
A
A
A
O4'
C1'
C2'
DG
DG
DG
6
6
6
N
2
2.30
0.30
108.30
110.60
A
A
A
O4'
C1'
N9
DG
DG
DG
6
6
6
N
2
3.72
0.60
126.00
129.72
A
A
A
N3
C4
N9
DG
DG
DG
6
6
6
N
2
-4.72
0.60
128.60
123.88
A
A
A
C5
C6
O6
DG
DG
DG
6
6
6
N
2
-4.29
0.70
102.20
97.91
A
A
A
C4'
C3'
C2'
DG
DG
DG
7
7
7
N
2
-12.01
0.80
105.90
93.89
A
A
A
O4'
C1'
C2'
DG
DG
DG
7
7
7
N
2
7.35
0.30
108.30
115.65
A
A
A
O4'
C1'
N9
DG
DG
DG
7
7
7
N
2
3.75
0.60
119.00
122.75
A
A
A
C4
C5
C7
DT
DT
DT
8
8
8
N
2
-5.70
0.60
122.90
117.20
A
A
A
C6
C5
C7
DT
DT
DT
8
8
8
N
2
-6.04
0.70
102.20
96.16
B
B
B
C4'
C3'
C2'
DG
DG
DG
1
1
1
N
2
-2.76
0.40
104.50
101.74
B
B
B
O4'
C4'
C3'
DA
DA
DA
2
2
2
N
2
-6.05
1.00
110.10
104.05
B
B
B
C1'
O4'
C4'
DA
DA
DA
2
2
2
N
2
-8.91
0.70
108.00
99.09
B
B
B
O4'
C1'
N9
DA
DA
DA
2
2
2
N
2
-3.14
0.40
104.50
101.36
B
B
B
O4'
C4'
C3'
DG
DG
DG
3
3
3
N
2
-7.24
1.00
110.10
102.86
B
B
B
C1'
O4'
C4'
DG
DG
DG
3
3
3
N
2
-5.92
0.40
104.50
98.58
B
B
B
O4'
C4'
C3'
DC
DC
DC
4
4
4
N
2
7.57
1.10
109.80
117.37
B
B
B
C5'
C4'
O4'
DC
DC
DC
4
4
4
N
2
13.52
2.00
112.30
125.82
B
B
B
C4'
C3'
O3'
DC
DC
DC
4
4
4
N
2
-5.38
0.80
105.90
100.52
B
B
B
O4'
C1'
C2'
DC
DC
DC
4
4
4
N
2
6.92
0.30
108.30
115.22
B
B
B
O4'
C1'
N1
DC
DC
DC
4
4
4
N
2
5.04
0.60
118.90
123.94
B
B
B
N1
C2
O2
DC
DC
DC
4
4
4
N
2
2.94
0.30
108.30
111.24
B
B
B
O4'
C1'
N9
DA
DA
DA
5
5
5
N
2
10.40
1.20
119.70
130.10
B
B
B
C3'
O3'
P
DA
DA
DG
5
5
6
Y
2
-11.98
0.80
105.90
93.92
B
B
B
O4'
C1'
C2'
DG
DG
DG
6
6
6
N
2
2.26
0.30
108.30
110.56
B
B
B
O4'
C1'
N9
DG
DG
DG
6
6
6
N
2
3.67
0.60
126.00
129.67
B
B
B
N3
C4
N9
DG
DG
DG
6
6
6
N
2
-4.55
0.60
128.60
124.05
B
B
B
C5
C6
O6
DG
DG
DG
6
6
6
N
2
-4.25
0.70
102.20
97.95
B
B
B
C4'
C3'
C2'
DG
DG
DG
7
7
7
N
2
-11.98
0.80
105.90
93.92
B
B
B
O4'
C1'
C2'
DG
DG
DG
7
7
7
N
2
7.28
0.30
108.30
115.58
B
B
B
O4'
C1'
N9
DG
DG
DG
7
7
7
N
2
3.74
0.60
119.00
122.74
B
B
B
C4
C5
C7
DT
DT
DT
8
8
8
N
2
-5.55
0.60
122.90
117.35
B
B
B
C6
C5
C7
DT
DT
DT
8
8
8
N
3
-7.18
1.00
110.10
102.92
A
A
A
C1'
O4'
C4'
DG
DG
DG
1
1
1
N
3
-9.13
0.80
102.40
93.27
A
A
A
C3'
C2'
C1'
DG
DG
DG
1
1
1
N
3
6.59
0.30
108.30
114.89
A
A
A
O4'
C1'
N9
DG
DG
DG
1
1
1
N
3
7.84
1.20
115.70
123.54
A
A
A
C5'
C4'
C3'
DA
DA
DA
2
2
2
N
3
-4.90
0.70
108.00
103.10
A
A
A
O4'
C1'
N9
DA
DA
DA
2
2
2
N
3
10.78
1.20
119.70
130.48
A
A
A
C3'
O3'
P
DA
DA
DG
2
2
3
Y
3
-3.22
0.40
104.50
101.28
A
A
A
O4'
C4'
C3'
DG
DG
DG
3
3
3
N
3
-7.60
1.00
110.10
102.50
A
A
A
C1'
O4'
C4'
DG
DG
DG
3
3
3
N
3
-4.89
0.70
108.00
103.11
A
A
A
O4'
C1'
N9
DG
DG
DG
3
3
3
N
3
-5.86
0.40
104.50
98.64
A
A
A
O4'
C4'
C3'
DC
DC
DC
4
4
4
N
3
7.67
1.10
109.80
117.47
A
A
A
C5'
C4'
O4'
DC
DC
DC
4
4
4
N
3
13.12
2.00
112.30
125.42
A
A
A
C4'
C3'
O3'
DC
DC
DC
4
4
4
N
3
-5.63
0.80
105.90
100.27
A
A
A
O4'
C1'
C2'
DC
DC
DC
4
4
4
N
3
6.53
0.30
108.30
114.83
A
A
A
O4'
C1'
N1
DC
DC
DC
4
4
4
N
3
5.09
0.60
118.90
123.99
A
A
A
N1
C2
O2
DC
DC
DC
4
4
4
N
3
7.72
1.20
115.70
123.42
A
A
A
C5'
C4'
C3'
DA
DA
DA
5
5
5
N
3
3.48
0.30
108.30
111.78
A
A
A
O4'
C1'
N9
DA
DA
DA
5
5
5
N
3
-11.23
0.80
105.90
94.67
A
A
A
O4'
C1'
C2'
DG
DG
DG
6
6
6
N
3
-4.37
0.60
128.60
124.23
A
A
A
C5
C6
O6
DG
DG
DG
6
6
6
N
3
-11.65
0.80
105.90
94.25
A
A
A
O4'
C1'
C2'
DG
DG
DG
7
7
7
N
3
8.09
0.30
108.30
116.39
A
A
A
O4'
C1'
N9
DG
DG
DG
7
7
7
N
3
-3.66
0.60
128.60
124.94
A
A
A
C5
C6
O6
DG
DG
DG
7
7
7
N
3
4.12
0.60
119.00
123.12
A
A
A
C4
C5
C7
DT
DT
DT
8
8
8
N
3
-5.84
0.60
122.90
117.06
A
A
A
C6
C5
C7
DT
DT
DT
8
8
8
N
3
-7.24
1.00
110.10
102.86
B
B
B
C1'
O4'
C4'
DG
DG
DG
1
1
1
N
3
-9.10
0.80
102.40
93.30
B
B
B
C3'
C2'
C1'
DG
DG
DG
1
1
1
N
3
6.59
0.30
108.30
114.89
B
B
B
O4'
C1'
N9
DG
DG
DG
1
1
1
N
3
7.83
1.20
115.70
123.53
B
B
B
C5'
C4'
C3'
DA
DA
DA
2
2
2
N
3
-4.84
0.70
108.00
103.16
B
B
B
O4'
C1'
N9
DA
DA
DA
2
2
2
N
3
10.80
1.20
119.70
130.50
B
B
B
C3'
O3'
P
DA
DA
DG
2
2
3
Y
3
-3.23
0.40
104.50
101.27
B
B
B
O4'
C4'
C3'
DG
DG
DG
3
3
3
N
3
-7.58
1.00
110.10
102.52
B
B
B
C1'
O4'
C4'
DG
DG
DG
3
3
3
N
3
-4.93
0.70
108.00
103.07
B
B
B
O4'
C1'
N9
DG
DG
DG
3
3
3
N
3
-5.86
0.40
104.50
98.64
B
B
B
O4'
C4'
C3'
DC
DC
DC
4
4
4
N
3
7.67
1.10
109.80
117.47
B
B
B
C5'
C4'
O4'
DC
DC
DC
4
4
4
N
3
13.08
2.00
112.30
125.38
B
B
B
C4'
C3'
O3'
DC
DC
DC
4
4
4
N
3
-5.58
0.80
105.90
100.32
B
B
B
O4'
C1'
C2'
DC
DC
DC
4
4
4
N
3
6.60
0.30
108.30
114.90
B
B
B
O4'
C1'
N1
DC
DC
DC
4
4
4
N
3
5.19
0.60
118.90
124.09
B
B
B
N1
C2
O2
DC
DC
DC
4
4
4
N
3
7.75
1.20
115.70
123.45
B
B
B
C5'
C4'
C3'
DA
DA
DA
5
5
5
N
3
3.41
0.30
108.30
111.71
B
B
B
O4'
C1'
N9
DA
DA
DA
5
5
5
N
3
-11.16
0.80
105.90
94.74
B
B
B
O4'
C1'
C2'
DG
DG
DG
6
6
6
N
3
-4.45
0.60
128.60
124.15
B
B
B
C5
C6
O6
DG
DG
DG
6
6
6
N
3
-11.58
0.80
105.90
94.32
B
B
B
O4'
C1'
C2'
DG
DG
DG
7
7
7
N
3
8.01
0.30
108.30
116.31
B
B
B
O4'
C1'
N9
DG
DG
DG
7
7
7
N
3
-3.69
0.60
128.60
124.91
B
B
B
C5
C6
O6
DG
DG
DG
7
7
7
N
3
4.08
0.60
119.00
123.08
B
B
B
C4
C5
C7
DT
DT
DT
8
8
8
N
3
-5.75
0.60
122.90
117.15
B
B
B
C6
C5
C7
DT
DT
DT
8
8
8
N
4
-7.40
1.00
110.10
102.70
A
A
A
C1'
O4'
C4'
DG
DG
DG
1
1
1
N
4
-4.22
0.70
102.20
97.98
A
A
A
C4'
C3'
C2'
DG
DG
DG
1
1
1
N
4
-8.74
0.80
102.40
93.66
A
A
A
C3'
C2'
C1'
DG
DG
DG
1
1
1
N
4
3.36
0.50
106.80
110.16
A
A
A
O4'
C1'
C2'
DG
DG
DG
1
1
1
N
4
5.62
0.30
108.30
113.92
A
A
A
O4'
C1'
N9
DG
DG
DG
1
1
1
N
4
7.87
1.20
115.70
123.57
A
A
A
C5'
C4'
C3'
DA
DA
DA
2
2
2
N
4
-4.68
0.70
108.00
103.32
A
A
A
O4'
C1'
N9
DA
DA
DA
2
2
2
N
4
11.12
1.20
119.70
130.82
A
A
A
C3'
O3'
P
DA
DA
DG
2
2
3
Y
4
-3.93
0.40
104.50
100.57
A
A
A
O4'
C4'
C3'
DG
DG
DG
3
3
3
N
4
-6.38
1.00
110.10
103.72
A
A
A
C1'
O4'
C4'
DG
DG
DG
3
3
3
N
4
-5.53
0.40
104.50
98.97
A
A
A
O4'
C4'
C3'
DC
DC
DC
4
4
4
N
4
6.67
1.10
109.80
116.47
A
A
A
C5'
C4'
O4'
DC
DC
DC
4
4
4
N
4
7.61
0.30
108.30
115.91
A
A
A
O4'
C1'
N1
DC
DC
DC
4
4
4
N
4
3.87
0.60
118.90
122.77
A
A
A
N1
C2
O2
DC
DC
DC
4
4
4
N
4
5.59
0.30
108.30
113.89
A
A
A
O4'
C1'
N9
DA
DA
DA
5
5
5
N
4
9.32
1.20
119.70
129.02
A
A
A
C3'
O3'
P
DA
DA
DG
5
5
6
Y
4
-11.06
0.80
105.90
94.84
A
A
A
O4'
C1'
C2'
DG
DG
DG
6
6
6
N
4
-4.89
0.60
128.60
123.71
A
A
A
C5
C6
O6
DG
DG
DG
6
6
6
N
4
-6.36
0.70
102.20
95.84
A
A
A
C4'
C3'
C2'
DG
DG
DG
7
7
7
N
4
-5.16
0.80
102.40
97.24
A
A
A
C3'
C2'
C1'
DG
DG
DG
7
7
7
N
4
-11.24
0.80
105.90
94.66
A
A
A
O4'
C1'
C2'
DG
DG
DG
7
7
7
N
4
15.44
0.30
108.30
123.74
A
A
A
O4'
C1'
N9
DG
DG
DG
7
7
7
N
4
-3.85
0.60
128.60
124.75
A
A
A
C5
C6
O6
DG
DG
DG
7
7
7
N
4
-4.46
0.70
108.00
103.54
A
A
A
O4'
C1'
N1
DT
DT
DT
8
8
8
N
4
-7.35
1.00
110.10
102.75
B
B
B
C1'
O4'
C4'
DG
DG
DG
1
1
1
N
4
-4.22
0.70
102.20
97.98
B
B
B
C4'
C3'
C2'
DG
DG
DG
1
1
1
N
4
-8.69
0.80
102.40
93.71
B
B
B
C3'
C2'
C1'
DG
DG
DG
1
1
1
N
4
3.30
0.50
106.80
110.10
B
B
B
O4'
C1'
C2'
DG
DG
DG
1
1
1
N
4
5.67
0.30
108.30
113.97
B
B
B
O4'
C1'
N9
DG
DG
DG
1
1
1
N
4
7.83
1.20
115.70
123.53
B
B
B
C5'
C4'
C3'
DA
DA
DA
2
2
2
N
4
-4.65
0.70
108.00
103.35
B
B
B
O4'
C1'
N9
DA
DA
DA
2
2
2
N
4
11.13
1.20
119.70
130.83
B
B
B
C3'
O3'
P
DA
DA
DG
2
2
3
Y
4
-3.96
0.40
104.50
100.54
B
B
B
O4'
C4'
C3'
DG
DG
DG
3
3
3
N
4
-6.36
1.00
110.10
103.74
B
B
B
C1'
O4'
C4'
DG
DG
DG
3
3
3
N
4
-5.53
0.40
104.50
98.97
B
B
B
O4'
C4'
C3'
DC
DC
DC
4
4
4
N
4
6.65
1.10
109.80
116.45
B
B
B
C5'
C4'
O4'
DC
DC
DC
4
4
4
N
4
7.61
0.30
108.30
115.91
B
B
B
O4'
C1'
N1
DC
DC
DC
4
4
4
N
4
3.89
0.60
118.90
122.79
B
B
B
N1
C2
O2
DC
DC
DC
4
4
4
N
4
5.63
0.30
108.30
113.93
B
B
B
O4'
C1'
N9
DA
DA
DA
5
5
5
N
4
9.40
1.20
119.70
129.10
B
B
B
C3'
O3'
P
DA
DA
DG
5
5
6
Y
4
-11.04
0.80
105.90
94.86
B
B
B
O4'
C1'
C2'
DG
DG
DG
6
6
6
N
4
-4.90
0.60
128.60
123.70
B
B
B
C5
C6
O6
DG
DG
DG
6
6
6
N
4
-6.36
0.70
102.20
95.84
B
B
B
C4'
C3'
C2'
DG
DG
DG
7
7
7
N
4
-5.17
0.80
102.40
97.23
B
B
B
C3'
C2'
C1'
DG
DG
DG
7
7
7
N
4
-11.25
0.80
105.90
94.65
B
B
B
O4'
C1'
C2'
DG
DG
DG
7
7
7
N
4
15.37
0.30
108.30
123.67
B
B
B
O4'
C1'
N9
DG
DG
DG
7
7
7
N
4
-3.84
0.60
128.60
124.76
B
B
B
C5
C6
O6
DG
DG
DG
7
7
7
N
4
-4.46
0.70
108.00
103.54
B
B
B
O4'
C1'
N1
DT
DT
DT
8
8
8
N
5
-8.46
1.00
110.10
101.64
A
A
A
C1'
O4'
C4'
DG
DG
DG
1
1
1
N
5
-7.63
0.70
102.20
94.57
A
A
A
C4'
C3'
C2'
DG
DG
DG
1
1
1
N
5
-7.82
0.80
102.40
94.58
A
A
A
C3'
C2'
C1'
DG
DG
DG
1
1
1
N
5
5.01
0.30
108.30
113.31
A
A
A
O4'
C1'
N9
DG
DG
DG
1
1
1
N
5
-8.53
0.70
108.00
99.47
A
A
A
O4'
C1'
N9
DA
DA
DA
2
2
2
N
5
10.42
1.20
119.70
130.12
A
A
A
C3'
O3'
P
DA
DA
DG
2
2
3
Y
5
-3.79
0.40
104.50
100.71
A
A
A
O4'
C4'
C3'
DG
DG
DG
3
3
3
N
5
-6.72
1.00
110.10
103.38
A
A
A
C1'
O4'
C4'
DG
DG
DG
3
3
3
N
5
-6.67
0.40
104.50
97.83
A
A
A
O4'
C4'
C3'
DC
DC
DC
4
4
4
N
5
8.34
1.10
109.80
118.14
A
A
A
C5'
C4'
O4'
DC
DC
DC
4
4
4
N
5
13.62
2.00
112.30
125.92
A
A
A
C4'
C3'
O3'
DC
DC
DC
4
4
4
N
5
-5.75
0.80
105.90
100.15
A
A
A
O4'
C1'
C2'
DC
DC
DC
4
4
4
N
5
7.48
0.30
108.30
115.78
A
A
A
O4'
C1'
N1
DC
DC
DC
4
4
4
N
5
5.29
0.60
118.90
124.19
A
A
A
N1
C2
O2
DC
DC
DC
4
4
4
N
5
10.22
1.60
120.90
131.12
A
A
A
P
O5'
C5'
DA
DA
DA
5
5
5
N
5
4.49
0.30
108.30
112.79
A
A
A
O4'
C1'
N9
DA
DA
DA
5
5
5
N
5
11.01
1.20
119.70
130.71
A
A
A
C3'
O3'
P
DA
DA
DG
5
5
6
Y
5
-5.69
0.70
102.20
96.51
A
A
A
C4'
C3'
C2'
DG
DG
DG
6
6
6
N
5
-11.20
0.80
105.90
94.70
A
A
A
O4'
C1'
C2'
DG
DG
DG
6
6
6
N
5
3.97
0.60
126.00
129.97
A
A
A
N3
C4
N9
DG
DG
DG
6
6
6
N
5
-4.42
0.60
128.60
124.18
A
A
A
C5
C6
O6
DG
DG
DG
6
6
6
N
5
-4.21
0.70
102.20
97.99
A
A
A
C4'
C3'
C2'
DG
DG
DG
7
7
7
N
5
-4.87
0.80
102.40
97.53
A
A
A
C3'
C2'
C1'
DG
DG
DG
7
7
7
N
5
-11.09
0.80
105.90
94.81
A
A
A
O4'
C1'
C2'
DG
DG
DG
7
7
7
N
5
8.59
0.30
108.30
116.89
A
A
A
O4'
C1'
N9
DG
DG
DG
7
7
7
N
5
7.36
1.20
119.70
127.06
A
A
A
C3'
O3'
P
DG
DG
DT
7
7
8
Y
5
7.22
1.20
115.70
122.92
A
A
A
C5'
C4'
C3'
DT
DT
DT
8
8
8
N
5
-8.57
1.00
110.10
101.53
B
B
B
C1'
O4'
C4'
DG
DG
DG
1
1
1
N
5
-7.59
0.70
102.20
94.61
B
B
B
C4'
C3'
C2'
DG
DG
DG
1
1
1
N
5
-7.98
0.80
102.40
94.42
B
B
B
C3'
C2'
C1'
DG
DG
DG
1
1
1
N
5
5.11
0.30
108.30
113.41
B
B
B
O4'
C1'
N9
DG
DG
DG
1
1
1
N
5
-8.55
0.70
108.00
99.45
B
B
B
O4'
C1'
N9
DA
DA
DA
2
2
2
N
5
10.45
1.20
119.70
130.15
B
B
B
C3'
O3'
P
DA
DA
DG
2
2
3
Y
5
-3.75
0.40
104.50
100.75
B
B
B
O4'
C4'
C3'
DG
DG
DG
3
3
3
N
5
-6.71
1.00
110.10
103.39
B
B
B
C1'
O4'
C4'
DG
DG
DG
3
3
3
N
5
-6.64
0.40
104.50
97.86
B
B
B
O4'
C4'
C3'
DC
DC
DC
4
4
4
N
5
8.43
1.10
109.80
118.23
B
B
B
C5'
C4'
O4'
DC
DC
DC
4
4
4
N
5
13.66
2.00
112.30
125.96
B
B
B
C4'
C3'
O3'
DC
DC
DC
4
4
4
N
5
-5.77
0.80
105.90
100.13
B
B
B
O4'
C1'
C2'
DC
DC
DC
4
4
4
N
5
7.50
0.30
108.30
115.80
B
B
B
O4'
C1'
N1
DC
DC
DC
4
4
4
N
5
5.54
0.60
118.90
124.44
B
B
B
N1
C2
O2
DC
DC
DC
4
4
4
N
5
10.18
1.60
120.90
131.08
B
B
B
P
O5'
C5'
DA
DA
DA
5
5
5
N
5
4.44
0.30
108.30
112.74
B
B
B
O4'
C1'
N9
DA
DA
DA
5
5
5
N
5
10.93
1.20
119.70
130.63
B
B
B
C3'
O3'
P
DA
DA
DG
5
5
6
Y
5
-5.68
0.70
102.20
96.52
B
B
B
C4'
C3'
C2'
DG
DG
DG
6
6
6
N
5
-11.15
0.80
105.90
94.75
B
B
B
O4'
C1'
C2'
DG
DG
DG
6
6
6
N
5
3.86
0.60
126.00
129.86
B
B
B
N3
C4
N9
DG
DG
DG
6
6
6
N
5
-4.29
0.60
128.60
124.31
B
B
B
C5
C6
O6
DG
DG
DG
6
6
6
N
5
-4.83
0.80
102.40
97.57
B
B
B
C3'
C2'
C1'
DG
DG
DG
7
7
7
N
5
-11.05
0.80
105.90
94.85
B
B
B
O4'
C1'
C2'
DG
DG
DG
7
7
7
N
5
8.59
0.30
108.30
116.89
B
B
B
O4'
C1'
N9
DG
DG
DG
7
7
7
N
5
-3.67
0.60
128.60
124.93
B
B
B
C5
C6
O6
DG
DG
DG
7
7
7
N
5
7.33
1.20
119.70
127.03
B
B
B
C3'
O3'
P
DG
DG
DT
7
7
8
Y
5
7.23
1.20
115.70
122.93
B
B
B
C5'
C4'
C3'
DT
DT
DT
8
8
8
N
6
-6.03
1.00
110.10
104.07
A
A
A
C1'
O4'
C4'
DG
DG
DG
1
1
1
N
6
-8.17
0.80
102.40
94.23
A
A
A
C3'
C2'
C1'
DG
DG
DG
1
1
1
N
6
7.13
0.30
108.30
115.43
A
A
A
O4'
C1'
N9
DG
DG
DG
1
1
1
N
6
8.13
1.20
115.70
123.83
A
A
A
C5'
C4'
C3'
DA
DA
DA
2
2
2
N
6
11.50
1.20
119.70
131.20
A
A
A
C3'
O3'
P
DA
DA
DG
2
2
3
Y
6
-3.68
0.40
104.50
100.82
A
A
A
O4'
C4'
C3'
DG
DG
DG
3
3
3
N
6
-7.05
1.00
110.10
103.05
A
A
A
C1'
O4'
C4'
DG
DG
DG
3
3
3
N
6
-6.25
0.40
104.50
98.25
A
A
A
O4'
C4'
C3'
DC
DC
DC
4
4
4
N
6
7.85
1.10
109.80
117.65
A
A
A
C5'
C4'
O4'
DC
DC
DC
4
4
4
N
6
15.11
2.00
112.30
127.41
A
A
A
C4'
C3'
O3'
DC
DC
DC
4
4
4
N
6
-5.21
0.80
105.90
100.69
A
A
A
O4'
C1'
C2'
DC
DC
DC
4
4
4
N
6
6.19
0.30
108.30
114.49
A
A
A
O4'
C1'
N1
DC
DC
DC
4
4
4
N
6
5.57
0.60
118.90
124.47
A
A
A
N1
C2
O2
DC
DC
DC
4
4
4
N
6
10.96
1.20
115.70
126.66
A
A
A
C5'
C4'
C3'
DA
DA
DA
5
5
5
N
6
6.48
0.30
108.30
114.78
A
A
A
O4'
C1'
N9
DA
DA
DA
5
5
5
N
6
13.54
1.20
119.70
133.24
A
A
A
C3'
O3'
P
DA
DA
DG
5
5
6
Y
6
-6.76
0.70
102.20
95.44
A
A
A
C4'
C3'
C2'
DG
DG
DG
6
6
6
N
6
-9.90
0.80
105.90
96.00
A
A
A
O4'
C1'
C2'
DG
DG
DG
6
6
6
N
6
3.90
0.60
126.00
129.90
A
A
A
N3
C4
N9
DG
DG
DG
6
6
6
N
6
-4.22
0.60
128.60
124.38
A
A
A
C5
C6
O6
DG
DG
DG
6
6
6
N
6
-11.11
0.80
105.90
94.79
A
A
A
O4'
C1'
C2'
DG
DG
DG
7
7
7
N
6
5.61
0.30
108.30
113.91
A
A
A
O4'
C1'
N9
DG
DG
DG
7
7
7
N
6
-3.65
0.60
128.60
124.95
A
A
A
C5
C6
O6
DG
DG
DG
7
7
7
N
6
-6.07
1.00
110.10
104.03
B
B
B
C1'
O4'
C4'
DG
DG
DG
1
1
1
N
6
-8.21
0.80
102.40
94.19
B
B
B
C3'
C2'
C1'
DG
DG
DG
1
1
1
N
6
7.19
0.30
108.30
115.49
B
B
B
O4'
C1'
N9
DG
DG
DG
1
1
1
N
6
8.17
1.20
115.70
123.87
B
B
B
C5'
C4'
C3'
DA
DA
DA
2
2
2
N
6
11.50
1.20
119.70
131.20
B
B
B
C3'
O3'
P
DA
DA
DG
2
2
3
Y
6
-3.72
0.40
104.50
100.78
B
B
B
O4'
C4'
C3'
DG
DG
DG
3
3
3
N
6
-6.98
1.00
110.10
103.12
B
B
B
C1'
O4'
C4'
DG
DG
DG
3
3
3
N
6
-6.26
0.40
104.50
98.24
B
B
B
O4'
C4'
C3'
DC
DC
DC
4
4
4
N
6
7.76
1.10
109.80
117.56
B
B
B
C5'
C4'
O4'
DC
DC
DC
4
4
4
N
6
15.06
2.00
112.30
127.36
B
B
B
C4'
C3'
O3'
DC
DC
DC
4
4
4
N
6
-5.21
0.80
105.90
100.69
B
B
B
O4'
C1'
C2'
DC
DC
DC
4
4
4
N
6
6.24
0.30
108.30
114.54
B
B
B
O4'
C1'
N1
DC
DC
DC
4
4
4
N
6
5.59
0.60
118.90
124.49
B
B
B
N1
C2
O2
DC
DC
DC
4
4
4
N
6
10.97
1.20
115.70
126.67
B
B
B
C5'
C4'
C3'
DA
DA
DA
5
5
5
N
6
6.49
0.30
108.30
114.79
B
B
B
O4'
C1'
N9
DA
DA
DA
5
5
5
N
6
13.54
1.20
119.70
133.24
B
B
B
C3'
O3'
P
DA
DA
DG
5
5
6
Y
6
-6.73
0.70
102.20
95.47
B
B
B
C4'
C3'
C2'
DG
DG
DG
6
6
6
N
6
-9.83
0.80
105.90
96.07
B
B
B
O4'
C1'
C2'
DG
DG
DG
6
6
6
N
6
3.94
0.60
126.00
129.94
B
B
B
N3
C4
N9
DG
DG
DG
6
6
6
N
6
-4.13
0.60
128.60
124.47
B
B
B
C5
C6
O6
DG
DG
DG
6
6
6
N
6
-11.13
0.80
105.90
94.77
B
B
B
O4'
C1'
C2'
DG
DG
DG
7
7
7
N
6
5.58
0.30
108.30
113.88
B
B
B
O4'
C1'
N9
DG
DG
DG
7
7
7
N
6
-3.67
0.60
128.60
124.93
B
B
B
C5
C6
O6
DG
DG
DG
7
7
7
N
7
-7.12
1.00
110.10
102.98
A
A
A
C1'
O4'
C4'
DG
DG
DG
1
1
1
N
7
-8.43
0.80
102.40
93.97
A
A
A
C3'
C2'
C1'
DG
DG
DG
1
1
1
N
7
8.98
0.30
108.30
117.28
A
A
A
O4'
C1'
N9
DG
DG
DG
1
1
1
N
7
9.61
1.20
115.70
125.31
A
A
A
C5'
C4'
C3'
DA
DA
DA
2
2
2
N
7
11.69
1.20
119.70
131.39
A
A
A
C3'
O3'
P
DA
DA
DG
2
2
3
Y
7
-3.47
0.40
104.50
101.03
A
A
A
O4'
C4'
C3'
DG
DG
DG
3
3
3
N
7
-6.76
1.00
110.10
103.34
A
A
A
C1'
O4'
C4'
DG
DG
DG
3
3
3
N
7
-6.09
0.40
104.50
98.41
A
A
A
O4'
C4'
C3'
DC
DC
DC
4
4
4
N
7
6.69
1.10
109.80
116.49
A
A
A
C5'
C4'
O4'
DC
DC
DC
4
4
4
N
7
14.98
2.00
112.30
127.28
A
A
A
C4'
C3'
O3'
DC
DC
DC
4
4
4
N
7
7.00
0.30
108.30
115.30
A
A
A
O4'
C1'
N1
DC
DC
DC
4
4
4
N
7
4.52
0.60
118.90
123.42
A
A
A
N1
C2
O2
DC
DC
DC
4
4
4
N
7
9.66
1.20
115.70
125.36
A
A
A
C5'
C4'
C3'
DA
DA
DA
5
5
5
N
7
7.38
0.30
108.30
115.68
A
A
A
O4'
C1'
N9
DA
DA
DA
5
5
5
N
7
9.78
1.20
119.70
129.48
A
A
A
C3'
O3'
P
DA
DA
DG
5
5
6
Y
7
-10.54
0.80
105.90
95.36
A
A
A
O4'
C1'
C2'
DG
DG
DG
6
6
6
N
7
-4.43
0.60
128.60
124.17
A
A
A
C5
C6
O6
DG
DG
DG
6
6
6
N
7
7.14
1.10
109.80
116.94
A
A
A
C5'
C4'
O4'
DG
DG
DG
7
7
7
N
7
-6.11
1.00
110.10
103.99
A
A
A
C1'
O4'
C4'
DG
DG
DG
7
7
7
N
7
-5.43
0.70
102.20
96.77
A
A
A
C4'
C3'
C2'
DG
DG
DG
7
7
7
N
7
-5.51
0.80
102.40
96.89
A
A
A
C3'
C2'
C1'
DG
DG
DG
7
7
7
N
7
-12.53
0.80
105.90
93.37
A
A
A
O4'
C1'
C2'
DG
DG
DG
7
7
7
N
7
12.87
0.30
108.30
121.17
A
A
A
O4'
C1'
N9
DG
DG
DG
7
7
7
N
7
-3.77
0.60
128.60
124.83
A
A
A
C5
C6
O6
DG
DG
DG
7
7
7
N
7
-5.86
0.70
108.00
102.14
A
A
A
O4'
C1'
N1
DT
DT
DT
8
8
8
N
7
-7.15
1.00
110.10
102.95
B
B
B
C1'
O4'
C4'
DG
DG
DG
1
1
1
N
7
-8.49
0.80
102.40
93.91
B
B
B
C3'
C2'
C1'
DG
DG
DG
1
1
1
N
7
8.96
0.30
108.30
117.26
B
B
B
O4'
C1'
N9
DG
DG
DG
1
1
1
N
7
9.63
1.20
115.70
125.33
B
B
B
C5'
C4'
C3'
DA
DA
DA
2
2
2
N
7
11.70
1.20
119.70
131.40
B
B
B
C3'
O3'
P
DA
DA
DG
2
2
3
Y
7
-3.50
0.40
104.50
101.00
B
B
B
O4'
C4'
C3'
DG
DG
DG
3
3
3
N
7
-6.73
1.00
110.10
103.37
B
B
B
C1'
O4'
C4'
DG
DG
DG
3
3
3
N
7
-6.15
0.40
104.50
98.35
B
B
B
O4'
C4'
C3'
DC
DC
DC
4
4
4
N
7
6.71
1.10
109.80
116.51
B
B
B
C5'
C4'
O4'
DC
DC
DC
4
4
4
N
7
14.93
2.00
112.30
127.23
B
B
B
C4'
C3'
O3'
DC
DC
DC
4
4
4
N
7
6.96
0.30
108.30
115.26
B
B
B
O4'
C1'
N1
DC
DC
DC
4
4
4
N
7
4.39
0.60
118.90
123.29
B
B
B
N1
C2
O2
DC
DC
DC
4
4
4
N
7
9.65
1.20
115.70
125.35
B
B
B
C5'
C4'
C3'
DA
DA
DA
5
5
5
N
7
7.39
0.30
108.30
115.69
B
B
B
O4'
C1'
N9
DA
DA
DA
5
5
5
N
7
9.72
1.20
119.70
129.42
B
B
B
C3'
O3'
P
DA
DA
DG
5
5
6
Y
7
-10.57
0.80
105.90
95.33
B
B
B
O4'
C1'
C2'
DG
DG
DG
6
6
6
N
7
-4.51
0.60
128.60
124.09
B
B
B
C5
C6
O6
DG
DG
DG
6
6
6
N
7
7.12
1.10
109.80
116.92
B
B
B
C5'
C4'
O4'
DG
DG
DG
7
7
7
N
7
-6.19
1.00
110.10
103.91
B
B
B
C1'
O4'
C4'
DG
DG
DG
7
7
7
N
7
-5.42
0.70
102.20
96.78
B
B
B
C4'
C3'
C2'
DG
DG
DG
7
7
7
N
7
-5.46
0.80
102.40
96.94
B
B
B
C3'
C2'
C1'
DG
DG
DG
7
7
7
N
7
-12.55
0.80
105.90
93.35
B
B
B
O4'
C1'
C2'
DG
DG
DG
7
7
7
N
7
12.79
0.30
108.30
121.09
B
B
B
O4'
C1'
N9
DG
DG
DG
7
7
7
N
7
-3.73
0.60
128.60
124.87
B
B
B
C5
C6
O6
DG
DG
DG
7
7
7
N
7
-5.91
0.70
108.00
102.09
B
B
B
O4'
C1'
N1
DT
DT
DT
8
8
8
N
8
-7.86
1.00
110.10
102.24
A
A
A
C1'
O4'
C4'
DG
DG
DG
1
1
1
N
8
-4.32
0.70
102.20
97.88
A
A
A
C4'
C3'
C2'
DG
DG
DG
1
1
1
N
8
-10.65
0.80
102.40
91.75
A
A
A
C3'
C2'
C1'
DG
DG
DG
1
1
1
N
8
6.24
0.30
108.30
114.54
A
A
A
O4'
C1'
N9
DG
DG
DG
1
1
1
N
8
-11.78
0.70
108.00
96.22
A
A
A
O4'
C1'
N9
DA
DA
DA
2
2
2
N
8
11.90
1.20
119.70
131.60
A
A
A
C3'
O3'
P
DA
DA
DG
2
2
3
Y
8
-3.35
0.40
104.50
101.15
A
A
A
O4'
C4'
C3'
DG
DG
DG
3
3
3
N
8
-6.80
1.00
110.10
103.30
A
A
A
C1'
O4'
C4'
DG
DG
DG
3
3
3
N
8
-6.29
0.40
104.50
98.21
A
A
A
O4'
C4'
C3'
DC
DC
DC
4
4
4
N
8
9.07
1.10
109.80
118.87
A
A
A
C5'
C4'
O4'
DC
DC
DC
4
4
4
N
8
12.45
2.00
112.30
124.75
A
A
A
C4'
C3'
O3'
DC
DC
DC
4
4
4
N
8
-5.70
0.80
105.90
100.20
A
A
A
O4'
C1'
C2'
DC
DC
DC
4
4
4
N
8
6.48
0.30
108.30
114.78
A
A
A
O4'
C1'
N1
DC
DC
DC
4
4
4
N
8
5.45
0.60
118.90
124.35
A
A
A
N1
C2
O2
DC
DC
DC
4
4
4
N
8
10.26
1.60
120.90
131.16
A
A
A
P
O5'
C5'
DA
DA
DA
5
5
5
N
8
3.25
0.30
108.30
111.55
A
A
A
O4'
C1'
N9
DA
DA
DA
5
5
5
N
8
10.57
1.20
119.70
130.27
A
A
A
C3'
O3'
P
DA
DA
DG
5
5
6
Y
8
-12.28
0.80
105.90
93.62
A
A
A
O4'
C1'
C2'
DG
DG
DG
6
6
6
N
8
1.92
0.30
108.30
110.22
A
A
A
O4'
C1'
N9
DG
DG
DG
6
6
6
N
8
3.94
0.60
126.00
129.94
A
A
A
N3
C4
N9
DG
DG
DG
6
6
6
N
8
-3.99
0.60
128.60
124.61
A
A
A
C5
C6
O6
DG
DG
DG
6
6
6
N
8
-11.25
0.80
105.90
94.65
A
A
A
O4'
C1'
C2'
DG
DG
DG
7
7
7
N
8
6.72
0.30
108.30
115.02
A
A
A
O4'
C1'
N9
DG
DG
DG
7
7
7
N
8
4.72
0.60
119.00
123.72
A
A
A
C4
C5
C7
DT
DT
DT
8
8
8
N
8
-6.36
0.60
122.90
116.54
A
A
A
C6
C5
C7
DT
DT
DT
8
8
8
N
8
-7.85
1.00
110.10
102.25
B
B
B
C1'
O4'
C4'
DG
DG
DG
1
1
1
N
8
-4.30
0.70
102.20
97.90
B
B
B
C4'
C3'
C2'
DG
DG
DG
1
1
1
N
8
-10.72
0.80
102.40
91.68
B
B
B
C3'
C2'
C1'
DG
DG
DG
1
1
1
N
8
6.27
0.30
108.30
114.57
B
B
B
O4'
C1'
N9
DG
DG
DG
1
1
1
N
8
-11.76
0.70
108.00
96.24
B
B
B
O4'
C1'
N9
DA
DA
DA
2
2
2
N
8
11.97
1.20
119.70
131.67
B
B
B
C3'
O3'
P
DA
DA
DG
2
2
3
Y
8
-3.41
0.40
104.50
101.09
B
B
B
O4'
C4'
C3'
DG
DG
DG
3
3
3
N
8
-6.74
1.00
110.10
103.36
B
B
B
C1'
O4'
C4'
DG
DG
DG
3
3
3
N
8
-6.25
0.40
104.50
98.25
B
B
B
O4'
C4'
C3'
DC
DC
DC
4
4
4
N
8
9.08
1.10
109.80
118.88
B
B
B
C5'
C4'
O4'
DC
DC
DC
4
4
4
N
8
12.54
2.00
112.30
124.84
B
B
B
C4'
C3'
O3'
DC
DC
DC
4
4
4
N
8
-5.64
0.80
105.90
100.26
B
B
B
O4'
C1'
C2'
DC
DC
DC
4
4
4
N
8
6.46
0.30
108.30
114.76
B
B
B
O4'
C1'
N1
DC
DC
DC
4
4
4
N
8
5.52
0.60
118.90
124.42
B
B
B
N1
C2
O2
DC
DC
DC
4
4
4
N
8
10.34
1.60
120.90
131.24
B
B
B
P
O5'
C5'
DA
DA
DA
5
5
5
N
8
3.19
0.30
108.30
111.49
B
B
B
O4'
C1'
N9
DA
DA
DA
5
5
5
N
8
10.57
1.20
119.70
130.27
B
B
B
C3'
O3'
P
DA
DA
DG
5
5
6
Y
8
-12.26
0.80
105.90
93.64
B
B
B
O4'
C1'
C2'
DG
DG
DG
6
6
6
N
8
1.89
0.30
108.30
110.19
B
B
B
O4'
C1'
N9
DG
DG
DG
6
6
6
N
8
3.80
0.60
126.00
129.80
B
B
B
N3
C4
N9
DG
DG
DG
6
6
6
N
8
-3.97
0.60
128.60
124.63
B
B
B
C5
C6
O6
DG
DG
DG
6
6
6
N
8
-11.30
0.80
105.90
94.60
B
B
B
O4'
C1'
C2'
DG
DG
DG
7
7
7
N
8
6.75
0.30
108.30
115.05
B
B
B
O4'
C1'
N9
DG
DG
DG
7
7
7
N
8
4.71
0.60
119.00
123.71
B
B
B
C4
C5
C7
DT
DT
DT
8
8
8
N
8
-6.42
0.60
122.90
116.48
B
B
B
C6
C5
C7
DT
DT
DT
8
8
8
N
9
-8.56
1.00
110.10
101.54
A
A
A
C1'
O4'
C4'
DG
DG
DG
1
1
1
N
9
-6.40
0.70
102.20
95.80
A
A
A
C4'
C3'
C2'
DG
DG
DG
1
1
1
N
9
-9.04
0.80
102.40
93.36
A
A
A
C3'
C2'
C1'
DG
DG
DG
1
1
1
N
9
3.00
0.50
106.80
109.80
A
A
A
O4'
C1'
C2'
DG
DG
DG
1
1
1
N
9
3.23
0.30
108.30
111.53
A
A
A
O4'
C1'
N9
DG
DG
DG
1
1
1
N
9
-7.61
1.00
110.10
102.49
A
A
A
C1'
O4'
C4'
DA
DA
DA
2
2
2
N
9
-4.97
0.80
105.90
100.93
A
A
A
O4'
C1'
C2'
DA
DA
DA
2
2
2
N
9
-5.53
0.70
108.00
102.47
A
A
A
O4'
C1'
N9
DA
DA
DA
2
2
2
N
9
-3.59
0.40
104.50
100.91
A
A
A
O4'
C4'
C3'
DG
DG
DG
3
3
3
N
9
-7.68
1.00
110.10
102.42
A
A
A
C1'
O4'
C4'
DG
DG
DG
3
3
3
N
9
-4.52
0.70
108.00
103.48
A
A
A
O4'
C1'
N9
DG
DG
DG
3
3
3
N
9
-6.59
0.40
104.50
97.91
A
A
A
O4'
C4'
C3'
DC
DC
DC
4
4
4
N
9
6.91
1.10
109.80
116.71
A
A
A
C5'
C4'
O4'
DC
DC
DC
4
4
4
N
9
13.11
2.00
112.30
125.41
A
A
A
C4'
C3'
O3'
DC
DC
DC
4
4
4
N
9
-6.04
0.80
105.90
99.86
A
A
A
O4'
C1'
C2'
DC
DC
DC
4
4
4
N
9
9.16
0.30
108.30
117.46
A
A
A
O4'
C1'
N1
DC
DC
DC
4
4
4
N
9
4.80
0.60
118.90
123.70
A
A
A
N1
C2
O2
DC
DC
DC
4
4
4
N
9
2.82
0.30
108.30
111.12
A
A
A
O4'
C1'
N9
DA
DA
DA
5
5
5
N
9
11.25
1.20
119.70
130.95
A
A
A
C3'
O3'
P
DA
DA
DG
5
5
6
Y
9
-11.80
0.80
105.90
94.10
A
A
A
O4'
C1'
C2'
DG
DG
DG
6
6
6
N
9
2.07
0.30
108.30
110.37
A
A
A
O4'
C1'
N9
DG
DG
DG
6
6
6
N
9
-3.96
0.60
128.60
124.64
A
A
A
C5
C6
O6
DG
DG
DG
6
6
6
N
9
-11.46
0.80
105.90
94.44
A
A
A
O4'
C1'
C2'
DG
DG
DG
7
7
7
N
9
7.89
0.30
108.30
116.19
A
A
A
O4'
C1'
N9
DG
DG
DG
7
7
7
N
9
-8.61
1.00
110.10
101.49
B
B
B
C1'
O4'
C4'
DG
DG
DG
1
1
1
N
9
-6.44
0.70
102.20
95.76
B
B
B
C4'
C3'
C2'
DG
DG
DG
1
1
1
N
9
-9.05
0.80
102.40
93.35
B
B
B
C3'
C2'
C1'
DG
DG
DG
1
1
1
N
9
3.02
0.50
106.80
109.82
B
B
B
O4'
C1'
C2'
DG
DG
DG
1
1
1
N
9
3.22
0.30
108.30
111.52
B
B
B
O4'
C1'
N9
DG
DG
DG
1
1
1
N
9
-7.61
1.00
110.10
102.49
B
B
B
C1'
O4'
C4'
DA
DA
DA
2
2
2
N
9
-4.98
0.80
105.90
100.92
B
B
B
O4'
C1'
C2'
DA
DA
DA
2
2
2
N
9
-5.48
0.70
108.00
102.52
B
B
B
O4'
C1'
N9
DA
DA
DA
2
2
2
N
9
-3.60
0.40
104.50
100.90
B
B
B
O4'
C4'
C3'
DG
DG
DG
3
3
3
N
9
-7.76
1.00
110.10
102.34
B
B
B
C1'
O4'
C4'
DG
DG
DG
3
3
3
N
9
-4.60
0.70
108.00
103.40
B
B
B
O4'
C1'
N9
DG
DG
DG
3
3
3
N
9
-6.62
0.40
104.50
97.88
B
B
B
O4'
C4'
C3'
DC
DC
DC
4
4
4
N
9
6.97
1.10
109.80
116.77
B
B
B
C5'
C4'
O4'
DC
DC
DC
4
4
4
N
9
13.12
2.00
112.30
125.42
B
B
B
C4'
C3'
O3'
DC
DC
DC
4
4
4
N
9
-6.03
0.80
105.90
99.87
B
B
B
O4'
C1'
C2'
DC
DC
DC
4
4
4
N
9
9.16
0.30
108.30
117.46
B
B
B
O4'
C1'
N1
DC
DC
DC
4
4
4
N
9
4.80
0.60
118.90
123.70
B
B
B
N1
C2
O2
DC
DC
DC
4
4
4
N
9
2.84
0.30
108.30
111.14
B
B
B
O4'
C1'
N9
DA
DA
DA
5
5
5
N
9
11.28
1.20
119.70
130.98
B
B
B
C3'
O3'
P
DA
DA
DG
5
5
6
Y
9
-11.76
0.80
105.90
94.14
B
B
B
O4'
C1'
C2'
DG
DG
DG
6
6
6
N
9
2.04
0.30
108.30
110.34
B
B
B
O4'
C1'
N9
DG
DG
DG
6
6
6
N
9
-4.04
0.60
128.60
124.56
B
B
B
C5
C6
O6
DG
DG
DG
6
6
6
N
9
-11.53
0.80
105.90
94.37
B
B
B
O4'
C1'
C2'
DG
DG
DG
7
7
7
N
9
7.90
0.30
108.30
116.20
B
B
B
O4'
C1'
N9
DG
DG
DG
7
7
7
N
9
-3.65
0.60
128.60
124.95
B
B
B
C5
C6
O6
DG
DG
DG
7
7
7
N
10
-7.90
1.00
110.10
102.20
A
A
A
C1'
O4'
C4'
DG
DG
DG
1
1
1
N
10
-7.97
0.70
102.20
94.23
A
A
A
C4'
C3'
C2'
DG
DG
DG
1
1
1
N
10
-8.82
0.80
102.40
93.58
A
A
A
C3'
C2'
C1'
DG
DG
DG
1
1
1
N
10
5.65
0.30
108.30
113.95
A
A
A
O4'
C1'
N9
DG
DG
DG
1
1
1
N
10
9.11
1.20
119.70
128.81
A
A
A
C3'
O3'
P
DG
DG
DA
1
1
2
Y
10
-6.41
1.00
110.10
103.69
A
A
A
C1'
O4'
C4'
DA
DA
DA
2
2
2
N
10
-4.87
0.80
105.90
101.03
A
A
A
O4'
C1'
C2'
DA
DA
DA
2
2
2
N
10
-8.45
0.70
108.00
99.55
A
A
A
O4'
C1'
N9
DA
DA
DA
2
2
2
N
10
-3.44
0.40
104.50
101.06
A
A
A
O4'
C4'
C3'
DG
DG
DG
3
3
3
N
10
-7.66
1.00
110.10
102.44
A
A
A
C1'
O4'
C4'
DG
DG
DG
3
3
3
N
10
-4.85
0.70
108.00
103.15
A
A
A
O4'
C1'
N9
DG
DG
DG
3
3
3
N
10
-6.42
0.40
104.50
98.08
A
A
A
O4'
C4'
C3'
DC
DC
DC
4
4
4
N
10
7.75
1.10
109.80
117.55
A
A
A
C5'
C4'
O4'
DC
DC
DC
4
4
4
N
10
13.21
2.00
112.30
125.51
A
A
A
C4'
C3'
O3'
DC
DC
DC
4
4
4
N
10
-5.66
0.80
105.90
100.24
A
A
A
O4'
C1'
C2'
DC
DC
DC
4
4
4
N
10
7.94
0.30
108.30
116.24
A
A
A
O4'
C1'
N1
DC
DC
DC
4
4
4
N
10
4.83
0.60
118.90
123.73
A
A
A
N1
C2
O2
DC
DC
DC
4
4
4
N
10
2.46
0.30
108.30
110.76
A
A
A
O4'
C1'
N9
DA
DA
DA
5
5
5
N
10
10.94
1.20
119.70
130.64
A
A
A
C3'
O3'
P
DA
DA
DG
5
5
6
Y
10
-11.78
0.80
105.90
94.12
A
A
A
O4'
C1'
C2'
DG
DG
DG
6
6
6
N
10
2.56
0.30
108.30
110.86
A
A
A
O4'
C1'
N9
DG
DG
DG
6
6
6
N
10
-4.42
0.60
128.60
124.18
A
A
A
C5
C6
O6
DG
DG
DG
6
6
6
N
10
-11.14
0.80
105.90
94.76
A
A
A
O4'
C1'
C2'
DG
DG
DG
7
7
7
N
10
8.16
0.30
108.30
116.46
A
A
A
O4'
C1'
N9
DG
DG
DG
7
7
7
N
10
-3.71
0.60
128.60
124.89
A
A
A
C5
C6
O6
DG
DG
DG
7
7
7
N
10
-3.79
0.60
122.90
119.11
A
A
A
C6
C5
C7
DT
DT
DT
8
8
8
N
10
-7.89
1.00
110.10
102.21
B
B
B
C1'
O4'
C4'
DG
DG
DG
1
1
1
N
10
-8.06
0.70
102.20
94.14
B
B
B
C4'
C3'
C2'
DG
DG
DG
1
1
1
N
10
-8.85
0.80
102.40
93.55
B
B
B
C3'
C2'
C1'
DG
DG
DG
1
1
1
N
10
5.60
0.30
108.30
113.90
B
B
B
O4'
C1'
N9
DG
DG
DG
1
1
1
N
10
9.13
1.20
119.70
128.83
B
B
B
C3'
O3'
P
DG
DG
DA
1
1
2
Y
10
-6.41
1.00
110.10
103.69
B
B
B
C1'
O4'
C4'
DA
DA
DA
2
2
2
N
10
-4.91
0.80
105.90
100.99
B
B
B
O4'
C1'
C2'
DA
DA
DA
2
2
2
N
10
-8.44
0.70
108.00
99.56
B
B
B
O4'
C1'
N9
DA
DA
DA
2
2
2
N
10
-3.44
0.40
104.50
101.06
B
B
B
O4'
C4'
C3'
DG
DG
DG
3
3
3
N
10
-7.64
1.00
110.10
102.46
B
B
B
C1'
O4'
C4'
DG
DG
DG
3
3
3
N
10
-4.81
0.70
108.00
103.19
B
B
B
O4'
C1'
N9
DG
DG
DG
3
3
3
N
10
-6.46
0.40
104.50
98.04
B
B
B
O4'
C4'
C3'
DC
DC
DC
4
4
4
N
10
7.73
1.10
109.80
117.53
B
B
B
C5'
C4'
O4'
DC
DC
DC
4
4
4
N
10
13.12
2.00
112.30
125.42
B
B
B
C4'
C3'
O3'
DC
DC
DC
4
4
4
N
10
-5.69
0.80
105.90
100.21
B
B
B
O4'
C1'
C2'
DC
DC
DC
4
4
4
N
10
7.95
0.30
108.30
116.25
B
B
B
O4'
C1'
N1
DC
DC
DC
4
4
4
N
10
4.97
0.60
118.90
123.87
B
B
B
N1
C2
O2
DC
DC
DC
4
4
4
N
10
2.46
0.30
108.30
110.76
B
B
B
O4'
C1'
N9
DA
DA
DA
5
5
5
N
10
10.95
1.20
119.70
130.65
B
B
B
C3'
O3'
P
DA
DA
DG
5
5
6
Y
10
-11.73
0.80
105.90
94.17
B
B
B
O4'
C1'
C2'
DG
DG
DG
6
6
6
N
10
2.53
0.30
108.30
110.83
B
B
B
O4'
C1'
N9
DG
DG
DG
6
6
6
N
10
-4.42
0.60
128.60
124.18
B
B
B
C5
C6
O6
DG
DG
DG
6
6
6
N
10
-11.16
0.80
105.90
94.74
B
B
B
O4'
C1'
C2'
DG
DG
DG
7
7
7
N
10
8.13
0.30
108.30
116.43
B
B
B
O4'
C1'
N9
DG
DG
DG
7
7
7
N
10
-3.73
0.60
128.60
124.87
B
B
B
C5
C6
O6
DG
DG
DG
7
7
7
N
10
-3.81
0.60
122.90
119.09
B
B
B
C6
C5
C7
DT
DT
DT
8
8
8
N
9
A
A
C8
N9
DG
DG
1
1
-0.044
0.007
1.374
1.330
N
9
B
B
C8
N9
DG
DG
1
1
-0.043
0.007
1.374
1.331
N
10
A
A
C8
N9
DG
DG
1
1
-0.047
0.007
1.374
1.327
N
10
B
B
C8
N9
DG
DG
1
1
-0.047
0.007
1.374
1.327
N
Dimeric DNA Quadruplex Containing Major Groove-Aligned A.T.A.T and G.C.G.C Tetrads Stabilized by Inter-Subunit Watson-Crick A:T and G:C Pairs
1
N
N
1
N
N
hydrog
TYPE_2_PAIR
A
DA
2
A
N6
DA
2
1_555
B
DA
2
B
N7
DA
2
1_555
hydrog
TYPE_2_PAIR
A
DA
2
A
N7
DA
2
1_555
B
DA
2
B
N6
DA
2
1_555
hydrog
WATSON-CRICK
A
DA
2
A
N1
DA
2
1_555
B
DT
8
B
N3
DT
8
1_555
hydrog
WATSON-CRICK
A
DA
2
A
N6
DA
2
1_555
B
DT
8
B
O4
DT
8
1_555
hydrog
TYPE_6_PAIR
A
DG
3
A
N1
DG
3
1_555
A
DG
7
A
O6
DG
7
1_555
hydrog
TYPE_6_PAIR
A
DG
3
A
N2
DG
3
1_555
A
DG
7
A
N7
DG
7
1_555
hydrog
TYPE_6_PAIR
A
DG
3
A
N7
DG
3
1_555
B
DG
7
B
N2
DG
7
1_555
hydrog
TYPE_6_PAIR
A
DG
3
A
O6
DG
3
1_555
B
DG
7
B
N1
DG
7
1_555
hydrog
DC-DG PAIR
A
DC
4
A
N4
DC
4
1_555
A
DG
6
A
O6
DG
6
1_555
hydrog
WATSON-CRICK
A
DC
4
A
N3
DC
4
1_555
B
DG
6
B
N1
DG
6
1_555
hydrog
WATSON-CRICK
A
DC
4
A
N4
DC
4
1_555
B
DG
6
B
O6
DG
6
1_555
hydrog
WATSON-CRICK
A
DC
4
A
O2
DC
4
1_555
B
DG
6
B
N2
DG
6
1_555
hydrog
WATSON-CRICK
A
DG
6
A
N1
DG
6
1_555
B
DC
4
B
N3
DC
4
1_555
hydrog
WATSON-CRICK
A
DG
6
A
N2
DG
6
1_555
B
DC
4
B
O2
DC
4
1_555
hydrog
WATSON-CRICK
A
DG
6
A
O6
DG
6
1_555
B
DC
4
B
N4
DC
4
1_555
hydrog
TYPE_6_PAIR
A
DG
7
A
N1
DG
7
1_555
B
DG
3
B
O6
DG
3
1_555
hydrog
TYPE_6_PAIR
A
DG
7
A
N2
DG
7
1_555
B
DG
3
B
N7
DG
3
1_555
hydrog
WATSON-CRICK
A
DT
8
A
N3
DT
8
1_555
B
DA
2
B
N1
DA
2
1_555
hydrog
WATSON-CRICK
A
DT
8
A
O4
DT
8
1_555
B
DA
2
B
N6
DA
2
1_555
hydrog
TYPE_6_PAIR
B
DG
3
B
N1
DG
3
1_555
B
DG
7
B
O6
DG
7
1_555
hydrog
TYPE_6_PAIR
B
DG
3
B
N2
DG
3
1_555
B
DG
7
B
N7
DG
7
1_555
hydrog
DC-DG PAIR
B
DC
4
B
N4
DC
4
1_555
B
DG
6
B
O6
DG
6
1_555
DNA
ATAT and GCGC tetrads, dimeric DNA quadruplex, hydrogen bond alignments, inter-subunit Watson-Crick pairs, DNA
1JVC
PDB
1
1JVC
1
8
1JVC
1
8
1JVC
A
1
1
8
1
8
1JVC
1
8
1JVC
B
1
1
8