0.016104 0.009298 0.000000 0.000000 0.018596 0.000000 0.000000 0.000000 0.006664 0.00000 0.00000 0.00000 Ruzheinikov, S.N. Das, S.K. Sedelnikova, S.E. Hartley, A. Foster, S.J. Horsburgh, M.J. Cox, A.G. McCleod, C.W. Mekhalfia, A. Blackburn, G.M. Rice, D.W. Baker, P.J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90 90 120 62.095 62.095 150.051 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C4 H9 N O2 S 135.185 2-AMINO-4-MERCAPTO-BUTYRIC ACID L-Homocysteine L-peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C3 H7 N O5 S 169.156 n CYSTEINESULFONIC ACID L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C9 H17 N O6 S 267.299 (2S)-2-amino-4-[[(2S,3S,4R,5R)-3,4,5-trihydroxyoxolan-2-yl]methylsulfanyl]butanoic acid 5-(3-AMINO-4,4-DIHYROXY-BUTYLSULFANYLMETHYL)-TETRAHYDRO-FURAN-2,3,4-TRIOL D-saccharide, beta linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N C N 141 N S N 142 N C N 143 N O N 144 N O N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N N N 155 S C N 156 N C N 157 N O N 158 N C Y 159 N C Y 160 N N Y 161 N C Y 162 N C Y 163 N N N 164 N O N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N O N 176 N H N 177 N H N 178 N N N 179 S C N 180 N C N 181 N O N 182 S C N 183 N C N 184 N C N 185 N C N 186 N O N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N N N 201 S C N 202 N C N 203 N O N 204 N C N 205 N C N 206 N C N 207 N C N 208 N O N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N N N 223 S C N 224 N C N 225 N O N 226 N C N 227 N C N 228 N C N 229 N C N 230 N N N 231 N O N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N N N 248 S C N 249 N C N 250 N O N 251 N C N 252 N C N 253 N S N 254 N C N 255 N O N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N N N 268 R C N 269 N C N 270 N S N 271 N C N 272 N O N 273 N O N 274 N O N 275 N O N 276 N O N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N N N 285 S C N 286 N C N 287 N O N 288 N C Y 289 N C Y 290 N C Y 291 N C Y 292 N C Y 293 N C Y 294 N C N 295 N O N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N N N 308 S C N 309 N C N 310 N O N 311 N C N 312 N C N 313 N C N 314 N O N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 R C N 325 N O N 326 R C N 327 N O N 328 S C N 329 N O N 330 S C N 331 N O N 332 N C N 333 N N N 334 S C N 335 N C N 336 N C N 337 N S N 338 N C N 339 N O N 340 N O N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N N N 359 S C N 360 N C N 361 N O N 362 N C N 363 N O N 364 N O N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N S N 373 N O N 374 N O N 375 N O N 376 N O N 377 N N N 378 S C N 379 N C N 380 N O N 381 R C N 382 N O N 383 N C N 384 N O N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N N N 395 S C N 396 N C N 397 N O N 398 N C Y 399 N C Y 400 N C Y 401 N C Y 402 N N Y 403 N C Y 404 N C Y 405 N C Y 406 N C Y 407 N C N 408 N O N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N N N 422 S C N 423 N C N 424 N O N 425 N C Y 426 N C Y 427 N C Y 428 N C Y 429 N C Y 430 N C Y 431 N C N 432 N O N 433 N O N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N N N 446 S C N 447 N C N 448 N O N 449 N C N 450 N C N 451 N C N 452 N O N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N ZN N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N doub N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N doub N 152 N sing N 153 N sing N 154 N sing N 155 N sing Y 156 N sing Y 157 N doub Y 158 N doub N 159 N sing Y 160 N sing N 161 N sing Y 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N doub N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N doub N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N doub N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N doub N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N doub N 263 N sing N 264 N doub N 265 N doub N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N doub N 276 N sing N 277 N sing N 278 N sing N 279 N sing Y 280 N doub Y 281 N sing Y 282 N sing N 283 N sing Y 284 N doub N 285 N sing Y 286 N doub N 287 N sing Y 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N doub N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N doub N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N doub N 357 N doub N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N doub N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N doub N 383 N sing N 384 N sing N 385 N sing N 386 N sing Y 387 N doub Y 388 N sing Y 389 N sing N 390 N sing Y 391 N doub Y 392 N sing Y 393 N sing N 394 N sing Y 395 N sing Y 396 N doub N 397 N sing Y 398 N doub N 399 N sing Y 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N doub N 411 N sing N 412 N sing N 413 N sing N 414 N sing Y 415 N doub Y 416 N sing Y 417 N sing N 418 N sing Y 419 N doub N 420 N sing Y 421 N doub N 422 N sing Y 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N doub N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing UK J.Mol.Biol. JMOBAK 0070 0022-2836 313 111 122 10.1006/jmbi.2001.5027 11601850 The 1.2 A structure of a novel quorum-sensing protein, Bacillus subtilis LuxS 2001 DK Acta Crystallogr.,Sect.D ABCRE6 0766 0907-4449 57 1324 1325 10.1107/S0907444901011611 Cloning, purification, crystallization and preliminary crystallographic analysis of Bacillus subtilis LuxS. 2001 10.2210/pdb1jvi/pdb pdb_00001jvi 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 IMAGE PLATE MARRESEARCH SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU 17790.219 Autoinducer-2 production protein luxS P96T 1 man polymer 65.409 ZINC ION 1 syn non-polymer 96.063 SULFATE ION 1 syn non-polymer 267.299 (2S)-2-amino-4-[[(2S,3S,4R,5R)-3,4,5-trihydroxyoxolan-2-yl]methylsulfanyl]butanoic acid 1 syn non-polymer 135.185 2-AMINO-4-MERCAPTO-BUTYRIC ACID 1 syn non-polymer 18.015 water 81 nat water AI-2 synthesis protein no yes MPSVESFELDHNAVVAPYVRHCGVHKVGTDGVVNKFDIRFCQPNKQAMKPDTIHTLEHLLAFTIRSHAEKYDHFDIIDIS PMG(OCS)QTGYYLVVSGETTSAEIVDLLEDTMKEAVEITEIPAANEKQCGQAKLHDLEGAKRLMRFWLSQDKEELLKVF G MPSVESFELDHNAVVAPYVRHCGVHKVGTDGVVNKFDIRFCQPNKQAMKPDTIHTLEHLLAFTIRSHAEKYDHFDIIDIS PMGCQTGYYLVVSGETTSAEIVDLLEDTMKEAVEITEIPAANEKQCGQAKLHDLEGAKRLMRFWLSQDKEELLKVFG A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Bacillus Escherichia sample LUXS 1423 Bacillus subtilis 562 Escherichia coli TUNER (DE3) PLACI PLASMID PSKD1 1 2.55 45.3 VAPOR DIFFUSION, HANGING DROP 1.8 - 2.4M AMMONIUM SULPHATE, 0.1M TRIS-HCL, VAPOR DIFFUSION, HANGING DROP, temperature 290K 290 atom_site chem_comp entity pdbx_entity_nonpoly struct_conn struct_ref_seq_dif struct_site struct_site_gen chem_comp database_2 struct_ref_seq_dif chem_comp_atom chem_comp_bond pdbx_initial_refinement_model chem_comp_atom chem_comp_bond chem_comp repository Initial release Carbohydrate remediation repository Remediation Version format compliance Derived calculations Version format compliance Atomic model Database references Derived calculations Structure summary Database references Structure summary Data collection Refinement description Data collection Structure summary 1 0 2001-10-24 1 1 2008-04-01 1 2 2011-07-13 2 0 2020-07-29 2 1 2021-10-27 2 2 2023-08-16 2 3 2023-11-15 2 4 2024-04-03 _atom_site.auth_atom_id _atom_site.label_atom_id _chem_comp.name _chem_comp.type _entity.pdbx_description _pdbx_entity_nonpoly.name _struct_conn.pdbx_leaving_atom_flag _struct_ref_seq_dif.details _chem_comp.pdbx_synonyms _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _chem_comp_atom.atom_id _chem_comp_bond.atom_id_2 _chem_comp.pdbx_synonyms The 1.2 Angstrom Structure Of Bacillus Subtilis Luxs THE 2.3 ANGSTROM RESOLUTION STRUCTURE OF BACILLUS SUBTILIS LUXS/HOMOCYSTEINE COMPLEX RCSB Y RCSB 2001-08-30 REL ZN ZINC ION SO4 SULFATE ION RHC (2S)-2-amino-4-[[(2S,3S,4R,5R)-3,4,5-trihydroxyoxolan-2-yl]methylsulfanyl]butanoic acid HCS 2-AMINO-4-MERCAPTO-BUTYRIC ACID HOH water 1J98 PDB ENTRY 1J98 PDB experimental model ZN 300 2 ZN ZN 300 A SO4 501 3 SO4 SO4 501 A RHC 401 4 RHC RHC 401 A HCS 402 5 HCS HCS 402 A HOH 1 6 HOH HOH 502 A HOH 2 6 HOH HOH 503 A HOH 3 6 HOH HOH 504 A HOH 4 6 HOH HOH 505 A HOH 5 6 HOH HOH 506 A HOH 6 6 HOH HOH 507 A HOH 7 6 HOH HOH 508 A HOH 8 6 HOH HOH 509 A HOH 9 6 HOH HOH 510 A HOH 10 6 HOH HOH 511 A HOH 11 6 HOH HOH 512 A HOH 12 6 HOH HOH 513 A HOH 13 6 HOH HOH 514 A HOH 14 6 HOH HOH 515 A HOH 15 6 HOH HOH 516 A HOH 16 6 HOH HOH 517 A HOH 17 6 HOH HOH 518 A HOH 18 6 HOH HOH 519 A HOH 19 6 HOH HOH 520 A HOH 20 6 HOH HOH 521 A HOH 21 6 HOH HOH 522 A HOH 22 6 HOH HOH 523 A HOH 23 6 HOH HOH 524 A HOH 24 6 HOH HOH 525 A HOH 25 6 HOH HOH 526 A HOH 26 6 HOH HOH 527 A HOH 27 6 HOH HOH 528 A HOH 28 6 HOH HOH 529 A HOH 29 6 HOH HOH 530 A HOH 30 6 HOH HOH 531 A HOH 31 6 HOH HOH 532 A HOH 32 6 HOH HOH 533 A HOH 33 6 HOH HOH 534 A HOH 34 6 HOH HOH 535 A HOH 35 6 HOH HOH 536 A HOH 36 6 HOH HOH 537 A HOH 37 6 HOH HOH 538 A HOH 38 6 HOH HOH 539 A HOH 39 6 HOH HOH 540 A HOH 40 6 HOH HOH 541 A HOH 41 6 HOH HOH 542 A HOH 42 6 HOH HOH 543 A HOH 43 6 HOH HOH 544 A HOH 44 6 HOH HOH 545 A HOH 45 6 HOH HOH 546 A HOH 46 6 HOH HOH 547 A HOH 47 6 HOH HOH 548 A HOH 48 6 HOH HOH 549 A HOH 49 6 HOH HOH 550 A HOH 50 6 HOH HOH 551 A HOH 51 6 HOH HOH 552 A HOH 52 6 HOH HOH 553 A HOH 53 6 HOH HOH 554 A HOH 54 6 HOH HOH 555 A HOH 55 6 HOH HOH 556 A HOH 56 6 HOH HOH 557 A HOH 57 6 HOH HOH 558 A HOH 58 6 HOH HOH 559 A HOH 59 6 HOH HOH 560 A HOH 60 6 HOH HOH 561 A HOH 61 6 HOH HOH 562 A HOH 62 6 HOH HOH 563 A HOH 63 6 HOH HOH 564 A HOH 64 6 HOH HOH 565 A HOH 65 6 HOH HOH 566 A HOH 66 6 HOH HOH 567 A HOH 67 6 HOH HOH 568 A HOH 68 6 HOH HOH 569 A HOH 69 6 HOH HOH 570 A HOH 70 6 HOH HOH 571 A HOH 71 6 HOH HOH 572 A HOH 72 6 HOH HOH 573 A HOH 73 6 HOH HOH 574 A HOH 74 6 HOH HOH 575 A HOH 75 6 HOH HOH 576 A HOH 76 6 HOH HOH 577 A HOH 77 6 HOH HOH 578 A HOH 78 6 HOH HOH 579 A HOH 79 6 HOH HOH 580 A HOH 80 6 HOH HOH 581 A HOH 81 6 HOH HOH 582 A n 1 1 A n 2 2 A n 3 3 A VAL 4 n 4 VAL 4 A GLU 5 n 5 GLU 5 A SER 6 n 6 SER 6 A PHE 7 n 7 PHE 7 A GLU 8 n 8 GLU 8 A LEU 9 n 9 LEU 9 A ASP 10 n 10 ASP 10 A HIS 11 n 11 HIS 11 A ASN 12 n 12 ASN 12 A ALA 13 n 13 ALA 13 A VAL 14 n 14 VAL 14 A VAL 15 n 15 VAL 15 A ALA 16 n 16 ALA 16 A PRO 17 n 17 PRO 17 A TYR 18 n 18 TYR 18 A VAL 19 n 19 VAL 19 A ARG 20 n 20 ARG 20 A HIS 21 n 21 HIS 21 A CYS 22 n 22 CYS 22 A GLY 23 n 23 GLY 23 A VAL 24 n 24 VAL 24 A HIS 25 n 25 HIS 25 A LYS 26 n 26 LYS 26 A VAL 27 n 27 VAL 27 A GLY 28 n 28 GLY 28 A THR 29 n 29 THR 29 A ASP 30 n 30 ASP 30 A GLY 31 n 31 GLY 31 A VAL 32 n 32 VAL 32 A VAL 33 n 33 VAL 33 A ASN 34 n 34 ASN 34 A LYS 35 n 35 LYS 35 A PHE 36 n 36 PHE 36 A ASP 37 n 37 ASP 37 A ILE 38 n 38 ILE 38 A ARG 39 n 39 ARG 39 A PHE 40 n 40 PHE 40 A CYS 41 n 41 CYS 41 A GLN 42 n 42 GLN 42 A PRO 43 n 43 PRO 43 A ASN 44 n 44 ASN 44 A LYS 45 n 45 LYS 45 A GLN 46 n 46 GLN 46 A ALA 47 n 47 ALA 47 A MET 48 n 48 MET 48 A LYS 49 n 49 LYS 49 A PRO 50 n 50 PRO 50 A ASP 51 n 51 ASP 51 A THR 52 n 52 THR 52 A ILE 53 n 53 ILE 53 A HIS 54 n 54 HIS 54 A THR 55 n 55 THR 55 A LEU 56 n 56 LEU 56 A GLU 57 n 57 GLU 57 A HIS 58 n 58 HIS 58 A LEU 59 n 59 LEU 59 A LEU 60 n 60 LEU 60 A ALA 61 n 61 ALA 61 A PHE 62 n 62 PHE 62 A THR 63 n 63 THR 63 A ILE 64 n 64 ILE 64 A ARG 65 n 65 ARG 65 A SER 66 n 66 SER 66 A HIS 67 n 67 HIS 67 A ALA 68 n 68 ALA 68 A GLU 69 n 69 GLU 69 A LYS 70 n 70 LYS 70 A TYR 71 n 71 TYR 71 A ASP 72 n 72 ASP 72 A HIS 73 n 73 HIS 73 A PHE 74 n 74 PHE 74 A ASP 75 n 75 ASP 75 A ILE 76 n 76 ILE 76 A ILE 77 n 77 ILE 77 A ASP 78 n 78 ASP 78 A ILE 79 n 79 ILE 79 A SER 80 n 80 SER 80 A PRO 81 n 81 PRO 81 A MET 82 n 82 MET 82 A GLY 83 n 83 GLY 83 A CYO 84 n 84 OCS 84 A GLN 85 n 85 GLN 85 A THR 86 n 86 THR 86 A GLY 87 n 87 GLY 87 A TYR 88 n 88 TYR 88 A TYR 89 n 89 TYR 89 A LEU 90 n 90 LEU 90 A VAL 91 n 91 VAL 91 A VAL 92 n 92 VAL 92 A SER 93 n 93 SER 93 A GLY 94 n 94 GLY 94 A GLU 95 n 95 GLU 95 A THR 96 n 96 THR 96 A THR 97 n 97 THR 97 A SER 98 n 98 SER 98 A ALA 99 n 99 ALA 99 A GLU 100 n 100 GLU 100 A ILE 101 n 101 ILE 101 A VAL 102 n 102 VAL 102 A ASP 103 n 103 ASP 103 A LEU 104 n 104 LEU 104 A LEU 105 n 105 LEU 105 A GLU 106 n 106 GLU 106 A ASP 107 n 107 ASP 107 A THR 108 n 108 THR 108 A MET 109 n 109 MET 109 A LYS 110 n 110 LYS 110 A GLU 111 n 111 GLU 111 A ALA 112 n 112 ALA 112 A VAL 113 n 113 VAL 113 A GLU 114 n 114 GLU 114 A ILE 115 n 115 ILE 115 A THR 116 n 116 THR 116 A GLU 117 n 117 GLU 117 A ILE 118 n 118 ILE 118 A PRO 119 n 119 PRO 119 A ALA 120 n 120 ALA 120 A ALA 121 n 121 ALA 121 A ASN 122 n 122 ASN 122 A GLU 123 n 123 GLU 123 A LYS 124 n 124 LYS 124 A GLN 125 n 125 GLN 125 A CYS 126 n 126 CYS 126 A GLY 127 n 127 GLY 127 A GLN 128 n 128 GLN 128 A ALA 129 n 129 ALA 129 A LYS 130 n 130 LYS 130 A LEU 131 n 131 LEU 131 A HIS 132 n 132 HIS 132 A ASP 133 n 133 ASP 133 A LEU 134 n 134 LEU 134 A GLU 135 n 135 GLU 135 A GLY 136 n 136 GLY 136 A ALA 137 n 137 ALA 137 A LYS 138 n 138 LYS 138 A ARG 139 n 139 ARG 139 A LEU 140 n 140 LEU 140 A MET 141 n 141 MET 141 A ARG 142 n 142 ARG 142 A PHE 143 n 143 PHE 143 A TRP 144 n 144 TRP 144 A LEU 145 n 145 LEU 145 A SER 146 n 146 SER 146 A GLN 147 n 147 GLN 147 A ASP 148 n 148 ASP 148 A LYS 149 n 149 LYS 149 A GLU 150 n 150 GLU 150 A GLU 151 n 151 GLU 151 A LEU 152 n 152 LEU 152 A LEU 153 n 153 LEU 153 A LYS 154 n 154 LYS 154 A VAL 155 n 155 VAL 155 A PHE 156 n 156 PHE 156 A GLY 157 n 157 GLY 157 A author_and_software_defined_assembly PISA,PQS 2 dimeric 4440 -63 12250 A HIS 54 A NE2 HIS 54 1_555 A ZN 300 B ZN ZN 1_555 A HIS 58 A NE2 HIS 58 1_555 96.7 A HIS 54 A NE2 HIS 54 1_555 A ZN 300 B ZN ZN 1_555 A CYS 126 A SG CYS 126 1_555 98.2 A HIS 58 A NE2 HIS 58 1_555 A ZN 300 B ZN ZN 1_555 A CYS 126 A SG CYS 126 1_555 109.9 A OCS 84 CYSTEINESULFONIC ACID A OCS 84 CYS 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.5000000000 0.8660254038 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 12_564 x,x-y+1,-z-1/6 crystal symmetry operation -31.0475000000 53.7758474480 -25.0085000000 A N GLY 23 A N GLY 23 A O LYS 35 A O LYS 35 A N ILE 38 A N ILE 38 A O TYR 88 A O TYR 88 A O VAL 91 A O VAL 91 A N ASP 78 A N ASP 78 1 A MET 1 A MET 1 1 Y 1 A PRO 2 A PRO 2 1 Y 1 A SER 3 A SER 3 1 Y 1 A LYS 45 -133.00 -44.65 1 A ASP 78 -171.25 147.62 1 A GLN 128 -163.07 69.51 1 A ASP 133 -167.52 86.26 37.37 0.2419000 0.1739000 2.2 10 491 8850 8359 96.4 RANDOM 1 Isotropic THROUGHOUT 1.0 MOLECULAR REPLACEMENT PDB ENTRY 1J98 Engh & Huber 0.35 0.23 5.0 0.37 0.28 2.2 10 81 1337 31 0 1225 0.0107 1.5121 23.20 0.955 5.66 8.90 6.55 10.83 0.3130000 0.2630000 2.34 74 1391 0.3210000 0.2380000 2.51 82 1425 0.3820000 0.2230000 2.76 73 1452 0.2470000 0.1770000 3.15 78 1481 0.1990000 0.1510000 3.93 86 1529 0.2120000 0.1420000 10.0 98 1572 36.49 2.2 20.0 1JVI 8944 8944 0 0 0.0620000 1 13.1 2.63 95.7 0.3600000 2.2 2.25 553 1 92.5 refinement CNS data reduction DENZO data scaling SCALEPACK phasing CNS THE 2.2 ANGSTROM RESOLUTION STRUCTURE OF BACILLUS SUBTILIS LUXS/RIBOSILHOMOCYSTEINE COMPLEX 1 N N 2 N N 3 N N 4 N N 5 N N 6 N N The second part of the biological assembly is generated by the two fold axis: X, X-Y, 5/6-Z A VAL 4 A VAL 4 HELX_P A LEU 9 A LEU 9 5 1 6 A LYS 49 A LYS 49 HELX_P A GLU 69 A GLU 69 1 2 21 A THR 97 A THR 97 HELX_P A VAL 113 A VAL 113 1 3 17 A ASP 133 A ASP 133 HELX_P A SER 146 A SER 146 1 4 14 A ASP 148 A ASP 148 HELX_P A LEU 153 A LEU 153 1 5 6 covale 2.044 none A CYS 41 A SG CYS 41 1_555 A HCS 402 E SD HCS 1_555 covale 1.334 both A GLY 83 A C GLY 83 1_555 A OCS 84 A N OCS 84 1_555 covale 1.329 both A OCS 84 A C OCS 84 1_555 A GLN 85 A N GLN 85 1_555 metalc 2.236 A HIS 54 A NE2 HIS 54 1_555 A ZN 300 B ZN ZN 1_555 metalc 2.397 A HIS 58 A NE2 HIS 58 1_555 A ZN 300 B ZN ZN 1_555 metalc 2.422 A CYS 126 A SG CYS 126 1_555 A ZN 300 B ZN ZN 1_555 SIGNALING PROTEIN AUTOINDUCER SYNTHESIS, SIGNALING PROTEIN A ALA 16 A ALA 16 1 A PRO 17 A PRO 17 -0.32 LUXS_BACSU UNP 1 1 O34667 MPSVESFELDHNAVVAPYVRHCGVHKVGTDGVVNKFDIRFCQPNKQAMKPDTIHTLEHLLAFTIRSHAEKYDHFDIIDIS PMGCQTGYYLVVSGEPTSAEIVDLLEDTMKEAVEITEIPAANEKQCGQAKLHDLEGAKRLMRFWLSQDKEELLKVFG 1 157 1JVI 1 157 O34667 A 1 1 157 1 CYS modified residue OCS 84 1JVI A O34667 UNP 84 84 1 PRO engineered mutation THR 96 1JVI A O34667 UNP 96 96 4 anti-parallel anti-parallel anti-parallel A TYR 18 A TYR 18 A VAL 27 A VAL 27 A GLY 31 A GLY 31 A ARG 39 A ARG 39 A GLY 87 A GLY 87 A GLY 94 A GLY 94 A PHE 74 A PHE 74 A PRO 81 A PRO 81 179 P 65 2 2