0.015783
0.000000
0.000000
0.000000
0.011577
0.000000
0.000000
0.000000
0.011204
0.00000
0.00000
0.00000
Zhang, Z.
Qian, M.
Huang, Q.
Jia, Y.
Tang, Y.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90
90
90
63.36
86.38
89.25
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Ca 2
40.078
CALCIUM ION
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C3 H8 O
60.095
ISOPROPYL ALCOHOL
2-PROPANOL
non-polymer
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mn 2
54.938
MANGANESE (II) ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C5 H8 O2
100.116
PENTANEDIAL
non-polymer
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
CA
N
75
N
N
N
76
S
C
N
77
N
C
N
78
N
O
N
79
N
C
N
80
N
C
N
81
N
C
N
82
N
O
N
83
N
N
N
84
N
O
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
N
N
96
S
C
N
97
N
C
N
98
N
O
N
99
N
C
N
100
N
C
N
101
N
C
N
102
N
O
N
103
N
O
N
104
N
O
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
N
N
115
N
C
N
116
N
C
N
117
N
O
N
118
N
O
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
N
N
125
S
C
N
126
N
C
N
127
N
O
N
128
N
C
Y
129
N
C
Y
130
N
N
Y
131
N
C
Y
132
N
C
Y
133
N
N
N
134
N
O
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
O
N
146
N
H
N
147
N
H
N
148
N
N
N
149
S
C
N
150
N
C
N
151
N
O
N
152
S
C
N
153
N
C
N
154
N
C
N
155
N
C
N
156
N
O
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
C
N
171
N
C
N
172
N
C
N
173
N
O
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
N
N
183
S
C
N
184
N
C
N
185
N
O
N
186
N
C
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
O
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
N
N
205
S
C
N
206
N
C
N
207
N
O
N
208
N
C
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
N
N
213
N
O
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
N
N
230
S
C
N
231
N
C
N
232
N
O
N
233
N
C
N
234
N
C
N
235
N
S
N
236
N
C
N
237
N
O
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
MN
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
C
N
291
N
C
N
292
N
C
N
293
N
C
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
N
N
306
S
C
N
307
N
C
N
308
N
O
N
309
N
C
N
310
N
O
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
N
N
320
S
C
N
321
N
C
N
322
N
O
N
323
R
C
N
324
N
O
N
325
N
C
N
326
N
O
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
N
N
337
S
C
N
338
N
C
N
339
N
O
N
340
N
C
Y
341
N
C
Y
342
N
C
Y
343
N
C
Y
344
N
N
Y
345
N
C
Y
346
N
C
Y
347
N
C
Y
348
N
C
Y
349
N
C
N
350
N
O
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
N
N
364
S
C
N
365
N
C
N
366
N
O
N
367
N
C
Y
368
N
C
Y
369
N
C
Y
370
N
C
Y
371
N
C
Y
372
N
C
Y
373
N
C
N
374
N
O
N
375
N
O
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
N
N
388
S
C
N
389
N
C
N
390
N
O
N
391
N
C
N
392
N
C
N
393
N
C
N
394
N
O
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
Y
127
N
sing
Y
128
N
doub
Y
129
N
doub
N
130
N
sing
Y
131
N
sing
N
132
N
sing
Y
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
doub
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
doub
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
doub
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
doub
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
Y
246
N
doub
Y
247
N
sing
Y
248
N
sing
N
249
N
sing
Y
250
N
doub
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
doub
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
doub
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
doub
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
doub
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
doub
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
doub
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
Y
329
N
doub
Y
330
N
sing
Y
331
N
sing
N
332
N
sing
Y
333
N
doub
Y
334
N
sing
Y
335
N
sing
N
336
N
sing
Y
337
N
sing
Y
338
N
doub
N
339
N
sing
Y
340
N
doub
N
341
N
sing
Y
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
doub
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
Y
357
N
doub
Y
358
N
sing
Y
359
N
sing
N
360
N
sing
Y
361
N
doub
N
362
N
sing
Y
363
N
doub
N
364
N
sing
Y
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
doub
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
UK
J.Protein Chem.
JPCHD2
0935
0277-8033
20
423
429
10.1023/A:1012289022412
11732694
Crystal structure of the complex of concanavalin A and hexapeptide.
2001
UK
J.PROTEIN CHEM.
JPCHD2
0935
0277-8033
20
59
65
10.1023/A:1011053330536
Crystal Structure of the Complex of Concanavalin A and Tripeptide
2001
10.2210/pdb1jw6/pdb
pdb_00001jw6
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
298.0
1
IMAGE PLATE
1998-10-22
RIGAKU RAXIS IIC
GRAPHITE
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU300
25622.385
Concanavalin A
1
nat
polymer
922.057
PROTEIN (6-MER)
1
syn
polymer
54.938
MANGANESE (II) ION
1
syn
non-polymer
40.078
CALCIUM ION
1
syn
non-polymer
100.116
PENTANEDIAL
1
syn
non-polymer
60.095
ISOPROPYL ALCOHOL
1
syn
non-polymer
18.015
water
95
nat
water
no
no
ADTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQNGKVGTAHIIYNSVDKRLSAVVSYPNADSATVSYDVD
LDNVLPEWVRVGLSASTGLYKETNTILSWSFTSKLKSNSTHETNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVS
SNGSPQGSSVGRALFYAPVHIWESSAVVASFEATFTFLIKSPDSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN
ADTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQNGKVGTAHIIYNSVDKRLSAVVSYPNADSATVSYDVD
LDNVLPEWVRVGLSASTGLYKETNTILSWSFTSKLKSNSTHETNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVS
SNGSPQGSSVGRALFYAPVHIWESSAVVASFEATFTFLIKSPDSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN
A
polypeptide(L)
no
no
MYWYPY
MYWYPY
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Jack bean
Canavalia
sample
1
118
3823
Canavalia ensiformis
Jack bean
Canavalia
sample
119
237
3823
Canavalia ensiformis
1
2.30
46.50
VAPOR DIFFUSION, HANGING DROP
5.45
Sodium phosphate , pH 5.45, VAPOR DIFFUSION, HANGING DROP, temperature 300.0K
300.0
entity
entity_src_nat
pdbx_entity_src_syn
struct_ref
struct_ref_seq
struct_ref_seq_dif
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Version format compliance
Derived calculations
Version format compliance
Database references
Source and taxonomy
Structure summary
Refinement description
Data collection
Database references
Derived calculations
Refinement description
1
0
2001-09-26
1
1
2008-04-27
1
2
2011-07-13
1
3
2017-06-21
1
4
2017-10-04
1
5
2023-10-25
_entity.pdbx_description
_pdbx_entity_src_syn.ncbi_taxonomy_id
_pdbx_entity_src_syn.organism_scientific
_pdbx_entity_src_syn.pdbx_beg_seq_num
_pdbx_entity_src_syn.pdbx_end_seq_num
_struct_ref_seq.ref_id
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
1HQW contains same protein COMPLEX WITH A TRIPEPTIDE YPY
RCSB
Y
PDBJ
2001-09-02
REL
REL
1
A
O
HOH
553
7.89
1
B
O
HOH
554
5.94
1
B
O
HOH
577
7.63
1
B
O
HOH
578
8.82
MN
MANGANESE (II) ION
CA
CALCIUM ION
PTD
PENTANEDIAL
IPA
ISOPROPYL ALCOHOL
HOH
water
This sequence coming from polypeptide libery.
32630
synthetic construct
sample
1
6
1HQW
PDB ENTRY 1HQW
PDB
experimental model
MAN
240
3
MN
MN
240
A
CAL
241
4
CA
CA
241
A
PEN
2001
5
PTD
PTD
2001
A
IPO
3001
6
IPA
IPA
3001
A
WAT
500
7
HOH
HOH
500
A
WAT
501
7
HOH
HOH
501
A
WAT
502
7
HOH
HOH
502
A
WAT
503
7
HOH
HOH
503
A
WAT
504
7
HOH
HOH
504
A
WAT
505
7
HOH
HOH
505
A
WAT
506
7
HOH
HOH
506
A
WAT
507
7
HOH
HOH
507
A
WAT
508
7
HOH
HOH
508
A
WAT
509
7
HOH
HOH
509
A
WAT
510
7
HOH
HOH
510
A
WAT
511
7
HOH
HOH
511
A
WAT
512
7
HOH
HOH
512
A
WAT
513
7
HOH
HOH
513
A
WAT
514
7
HOH
HOH
514
A
WAT
516
7
HOH
HOH
516
A
WAT
517
7
HOH
HOH
517
A
WAT
518
7
HOH
HOH
518
A
WAT
519
7
HOH
HOH
519
A
WAT
520
7
HOH
HOH
520
A
WAT
521
7
HOH
HOH
521
A
WAT
522
7
HOH
HOH
522
A
WAT
523
7
HOH
HOH
523
A
WAT
524
7
HOH
HOH
524
A
WAT
525
7
HOH
HOH
525
A
WAT
526
7
HOH
HOH
526
A
WAT
527
7
HOH
HOH
527
A
WAT
528
7
HOH
HOH
528
A
WAT
529
7
HOH
HOH
529
A
WAT
530
7
HOH
HOH
530
A
WAT
531
7
HOH
HOH
531
A
WAT
532
7
HOH
HOH
532
A
WAT
533
7
HOH
HOH
533
A
WAT
534
7
HOH
HOH
534
A
WAT
535
7
HOH
HOH
535
A
WAT
536
7
HOH
HOH
536
A
WAT
537
7
HOH
HOH
537
A
WAT
538
7
HOH
HOH
538
A
WAT
539
7
HOH
HOH
539
A
WAT
540
7
HOH
HOH
540
A
WAT
541
7
HOH
HOH
541
A
WAT
542
7
HOH
HOH
542
A
WAT
543
7
HOH
HOH
543
A
WAT
544
7
HOH
HOH
544
A
WAT
545
7
HOH
HOH
545
A
WAT
546
7
HOH
HOH
546
A
WAT
547
7
HOH
HOH
547
A
WAT
548
7
HOH
HOH
548
A
WAT
549
7
HOH
HOH
549
A
WAT
550
7
HOH
HOH
550
A
WAT
551
7
HOH
HOH
551
A
WAT
552
7
HOH
HOH
552
A
WAT
553
7
HOH
HOH
553
A
WAT
556
7
HOH
HOH
556
A
WAT
557
7
HOH
HOH
557
A
WAT
558
7
HOH
HOH
558
A
WAT
559
7
HOH
HOH
559
A
WAT
560
7
HOH
HOH
560
A
WAT
561
7
HOH
HOH
561
A
WAT
562
7
HOH
HOH
562
A
WAT
563
7
HOH
HOH
563
A
WAT
564
7
HOH
HOH
564
A
WAT
565
7
HOH
HOH
565
A
WAT
566
7
HOH
HOH
566
A
WAT
567
7
HOH
HOH
567
A
WAT
568
7
HOH
HOH
568
A
WAT
569
7
HOH
HOH
569
A
WAT
570
7
HOH
HOH
570
A
WAT
571
7
HOH
HOH
571
A
WAT
572
7
HOH
HOH
572
A
WAT
573
7
HOH
HOH
573
A
WAT
574
7
HOH
HOH
574
A
WAT
575
7
HOH
HOH
575
A
WAT
576
7
HOH
HOH
576
A
WAT
579
7
HOH
HOH
579
A
WAT
580
7
HOH
HOH
580
A
WAT
581
7
HOH
HOH
581
A
WAT
582
7
HOH
HOH
582
A
WAT
583
7
HOH
HOH
583
A
WAT
584
7
HOH
HOH
584
A
WAT
585
7
HOH
HOH
585
A
WAT
586
7
HOH
HOH
586
A
WAT
588
7
HOH
HOH
588
A
WAT
589
7
HOH
HOH
589
A
WAT
590
7
HOH
HOH
590
A
WAT
593
7
HOH
HOH
593
A
HOH
594
7
HOH
HOH
594
A
WAT
515
7
HOH
HOH
515
B
WAT
554
7
HOH
HOH
554
B
WAT
555
7
HOH
HOH
555
B
WAT
577
7
HOH
HOH
577
B
WAT
578
7
HOH
HOH
578
B
WAT
587
7
HOH
HOH
587
B
WAT
591
7
HOH
HOH
591
B
WAT
592
7
HOH
HOH
592
B
ALA
1
n
1
ALA
1
A
ASP
2
n
2
ASP
2
A
THR
3
n
3
THR
3
A
ILE
4
n
4
ILE
4
A
VAL
5
n
5
VAL
5
A
ALA
6
n
6
ALA
6
A
VAL
7
n
7
VAL
7
A
GLU
8
n
8
GLU
8
A
LEU
9
n
9
LEU
9
A
ASP
10
n
10
ASP
10
A
THR
11
n
11
THR
11
A
TYR
12
n
12
TYR
12
A
PRO
13
n
13
PRO
13
A
ASN
14
n
14
ASN
14
A
THR
15
n
15
THR
15
A
ASP
16
n
16
ASP
16
A
ILE
17
n
17
ILE
17
A
GLY
18
n
18
GLY
18
A
ASP
19
n
19
ASP
19
A
PRO
20
n
20
PRO
20
A
SER
21
n
21
SER
21
A
TYR
22
n
22
TYR
22
A
PRO
23
n
23
PRO
23
A
HIS
24
n
24
HIS
24
A
ILE
25
n
25
ILE
25
A
GLY
26
n
26
GLY
26
A
ILE
27
n
27
ILE
27
A
ASP
28
n
28
ASP
28
A
ILE
29
n
29
ILE
29
A
LYS
30
n
30
LYS
30
A
SER
31
n
31
SER
31
A
VAL
32
n
32
VAL
32
A
ARG
33
n
33
ARG
33
A
SER
34
n
34
SER
34
A
LYS
35
n
35
LYS
35
A
LYS
36
n
36
LYS
36
A
THR
37
n
37
THR
37
A
ALA
38
n
38
ALA
38
A
LYS
39
n
39
LYS
39
A
TRP
40
n
40
TRP
40
A
ASN
41
n
41
ASN
41
A
MET
42
n
42
MET
42
A
GLN
43
n
43
GLN
43
A
ASN
44
n
44
ASN
44
A
GLY
45
n
45
GLY
45
A
LYS
46
n
46
LYS
46
A
VAL
47
n
47
VAL
47
A
GLY
48
n
48
GLY
48
A
THR
49
n
49
THR
49
A
ALA
50
n
50
ALA
50
A
HIS
51
n
51
HIS
51
A
ILE
52
n
52
ILE
52
A
ILE
53
n
53
ILE
53
A
TYR
54
n
54
TYR
54
A
ASN
55
n
55
ASN
55
A
SER
56
n
56
SER
56
A
VAL
57
n
57
VAL
57
A
ASP
58
n
58
ASP
58
A
LYS
59
n
59
LYS
59
A
ARG
60
n
60
ARG
60
A
LEU
61
n
61
LEU
61
A
SER
62
n
62
SER
62
A
ALA
63
n
63
ALA
63
A
VAL
64
n
64
VAL
64
A
VAL
65
n
65
VAL
65
A
SER
66
n
66
SER
66
A
TYR
67
n
67
TYR
67
A
PRO
68
n
68
PRO
68
A
ASN
69
n
69
ASN
69
A
ALA
70
n
70
ALA
70
A
ASP
71
n
71
ASP
71
A
SER
72
n
72
SER
72
A
ALA
73
n
73
ALA
73
A
THR
74
n
74
THR
74
A
VAL
75
n
75
VAL
75
A
SER
76
n
76
SER
76
A
TYR
77
n
77
TYR
77
A
ASP
78
n
78
ASP
78
A
VAL
79
n
79
VAL
79
A
ASP
80
n
80
ASP
80
A
LEU
81
n
81
LEU
81
A
ASP
82
n
82
ASP
82
A
ASN
83
n
83
ASN
83
A
VAL
84
n
84
VAL
84
A
LEU
85
n
85
LEU
85
A
PRO
86
n
86
PRO
86
A
GLU
87
n
87
GLU
87
A
TRP
88
n
88
TRP
88
A
VAL
89
n
89
VAL
89
A
ARG
90
n
90
ARG
90
A
VAL
91
n
91
VAL
91
A
GLY
92
n
92
GLY
92
A
LEU
93
n
93
LEU
93
A
SER
94
n
94
SER
94
A
ALA
95
n
95
ALA
95
A
SER
96
n
96
SER
96
A
THR
97
n
97
THR
97
A
GLY
98
n
98
GLY
98
A
LEU
99
n
99
LEU
99
A
TYR
100
n
100
TYR
100
A
LYS
101
n
101
LYS
101
A
GLU
102
n
102
GLU
102
A
THR
103
n
103
THR
103
A
ASN
104
n
104
ASN
104
A
THR
105
n
105
THR
105
A
ILE
106
n
106
ILE
106
A
LEU
107
n
107
LEU
107
A
SER
108
n
108
SER
108
A
TRP
109
n
109
TRP
109
A
SER
110
n
110
SER
110
A
PHE
111
n
111
PHE
111
A
THR
112
n
112
THR
112
A
SER
113
n
113
SER
113
A
LYS
114
n
114
LYS
114
A
LEU
115
n
115
LEU
115
A
LYS
116
n
116
LYS
116
A
SER
117
n
117
SER
117
A
ASN
118
n
118
ASN
118
A
SER
119
n
119
SER
119
A
THR
120
n
120
THR
120
A
HIS
121
n
121
HIS
121
A
GLU
122
n
122
GLU
122
A
THR
123
n
123
THR
123
A
ASN
124
n
124
ASN
124
A
ALA
125
n
125
ALA
125
A
LEU
126
n
126
LEU
126
A
HIS
127
n
127
HIS
127
A
PHE
128
n
128
PHE
128
A
MET
129
n
129
MET
129
A
PHE
130
n
130
PHE
130
A
ASN
131
n
131
ASN
131
A
GLN
132
n
132
GLN
132
A
PHE
133
n
133
PHE
133
A
SER
134
n
134
SER
134
A
LYS
135
n
135
LYS
135
A
ASP
136
n
136
ASP
136
A
GLN
137
n
137
GLN
137
A
LYS
138
n
138
LYS
138
A
ASP
139
n
139
ASP
139
A
LEU
140
n
140
LEU
140
A
ILE
141
n
141
ILE
141
A
LEU
142
n
142
LEU
142
A
GLN
143
n
143
GLN
143
A
GLY
144
n
144
GLY
144
A
ASP
145
n
145
ASP
145
A
ALA
146
n
146
ALA
146
A
THR
147
n
147
THR
147
A
THR
148
n
148
THR
148
A
GLY
149
n
149
GLY
149
A
THR
150
n
150
THR
150
A
ASP
151
n
151
ASP
151
A
GLY
152
n
152
GLY
152
A
ASN
153
n
153
ASN
153
A
LEU
154
n
154
LEU
154
A
GLU
155
n
155
GLU
155
A
LEU
156
n
156
LEU
156
A
THR
157
n
157
THR
157
A
ARG
158
n
158
ARG
158
A
VAL
159
n
159
VAL
159
A
SER
160
n
160
SER
160
A
SER
161
n
161
SER
161
A
ASN
162
n
162
ASN
162
A
GLY
163
n
163
GLY
163
A
SER
164
n
164
SER
164
A
PRO
165
n
165
PRO
165
A
GLN
166
n
166
GLN
166
A
GLY
167
n
167
GLY
167
A
SER
168
n
168
SER
168
A
SER
169
n
169
SER
169
A
VAL
170
n
170
VAL
170
A
GLY
171
n
171
GLY
171
A
ARG
172
n
172
ARG
172
A
ALA
173
n
173
ALA
173
A
LEU
174
n
174
LEU
174
A
PHE
175
n
175
PHE
175
A
TYR
176
n
176
TYR
176
A
ALA
177
n
177
ALA
177
A
PRO
178
n
178
PRO
178
A
VAL
179
n
179
VAL
179
A
HIS
180
n
180
HIS
180
A
ILE
181
n
181
ILE
181
A
TRP
182
n
182
TRP
182
A
GLU
183
n
183
GLU
183
A
SER
184
n
184
SER
184
A
SER
185
n
185
SER
185
A
ALA
186
n
186
ALA
186
A
VAL
187
n
187
VAL
187
A
VAL
188
n
188
VAL
188
A
ALA
189
n
189
ALA
189
A
SER
190
n
190
SER
190
A
PHE
191
n
191
PHE
191
A
GLU
192
n
192
GLU
192
A
ALA
193
n
193
ALA
193
A
THR
194
n
194
THR
194
A
PHE
195
n
195
PHE
195
A
THR
196
n
196
THR
196
A
PHE
197
n
197
PHE
197
A
LEU
198
n
198
LEU
198
A
ILE
199
n
199
ILE
199
A
LYS
200
n
200
LYS
200
A
SER
201
n
201
SER
201
A
PRO
202
n
202
PRO
202
A
ASP
203
n
203
ASP
203
A
SER
204
n
204
SER
204
A
HIS
205
n
205
HIS
205
A
PRO
206
n
206
PRO
206
A
ALA
207
n
207
ALA
207
A
ASP
208
n
208
ASP
208
A
GLY
209
n
209
GLY
209
A
ILE
210
n
210
ILE
210
A
ALA
211
n
211
ALA
211
A
PHE
212
n
212
PHE
212
A
PHE
213
n
213
PHE
213
A
ILE
214
n
214
ILE
214
A
SER
215
n
215
SER
215
A
ASN
216
n
216
ASN
216
A
ILE
217
n
217
ILE
217
A
ASP
218
n
218
ASP
218
A
SER
219
n
219
SER
219
A
SER
220
n
220
SER
220
A
ILE
221
n
221
ILE
221
A
PRO
222
n
222
PRO
222
A
SER
223
n
223
SER
223
A
GLY
224
n
224
GLY
224
A
SER
225
n
225
SER
225
A
THR
226
n
226
THR
226
A
GLY
227
n
227
GLY
227
A
ARG
228
n
228
ARG
228
A
LEU
229
n
229
LEU
229
A
LEU
230
n
230
LEU
230
A
GLY
231
n
231
GLY
231
A
LEU
232
n
232
LEU
232
A
PHE
233
n
233
PHE
233
A
PRO
234
n
234
PRO
234
A
ASP
235
n
235
ASP
235
A
ALA
236
n
236
ALA
236
A
ASN
237
n
237
ASN
237
A
MET
4000
n
1
MET
4000
B
TYR
4001
n
2
TYR
4001
B
TRP
4002
n
3
TRP
4002
B
TYR
4003
n
4
TYR
4003
B
PRO
4004
n
5
PRO
4004
B
TYR
4005
n
6
TYR
4005
B
author_defined_assembly
8
octameric
software_defined_assembly
PISA
8
octameric
14610
-117
34660
A
GLU
8
A
OE2
GLU
8
1_555
A
MN
240
C
MN
MN
1_555
A
ASP
10
A
OD2
ASP
10
1_555
100.3
A
GLU
8
A
OE2
GLU
8
1_555
A
MN
240
C
MN
MN
1_555
A
ASP
19
A
OD1
ASP
19
1_555
164.3
A
ASP
10
A
OD2
ASP
10
1_555
A
MN
240
C
MN
MN
1_555
A
ASP
19
A
OD1
ASP
19
1_555
94.5
A
GLU
8
A
OE2
GLU
8
1_555
A
MN
240
C
MN
MN
1_555
A
HIS
24
A
NE2
HIS
24
1_555
92.9
A
ASP
10
A
OD2
ASP
10
1_555
A
MN
240
C
MN
MN
1_555
A
HIS
24
A
NE2
HIS
24
1_555
100.7
A
ASP
19
A
OD1
ASP
19
1_555
A
MN
240
C
MN
MN
1_555
A
HIS
24
A
NE2
HIS
24
1_555
89.3
A
GLU
8
A
OE2
GLU
8
1_555
A
MN
240
C
MN
MN
1_555
A
HOH
536
G
O
HOH
1_555
86.8
A
ASP
10
A
OD2
ASP
10
1_555
A
MN
240
C
MN
MN
1_555
A
HOH
536
G
O
HOH
1_555
89.2
A
ASP
19
A
OD1
ASP
19
1_555
A
MN
240
C
MN
MN
1_555
A
HOH
536
G
O
HOH
1_555
88.3
A
HIS
24
A
NE2
HIS
24
1_555
A
MN
240
C
MN
MN
1_555
A
HOH
536
G
O
HOH
1_555
169.9
A
GLU
8
A
OE2
GLU
8
1_555
A
MN
240
C
MN
MN
1_555
A
HOH
537
G
O
HOH
1_555
84.9
A
ASP
10
A
OD2
ASP
10
1_555
A
MN
240
C
MN
MN
1_555
A
HOH
537
G
O
HOH
1_555
174.8
A
ASP
19
A
OD1
ASP
19
1_555
A
MN
240
C
MN
MN
1_555
A
HOH
537
G
O
HOH
1_555
80.3
A
HIS
24
A
NE2
HIS
24
1_555
A
MN
240
C
MN
MN
1_555
A
HOH
537
G
O
HOH
1_555
78.5
A
HOH
536
G
O
HOH
1_555
A
MN
240
C
MN
MN
1_555
A
HOH
537
G
O
HOH
1_555
91.5
A
ASP
10
A
OD2
ASP
10
1_555
A
CA
241
D
CA
CA
1_555
A
ASP
10
A
OD1
ASP
10
1_555
50.4
A
ASP
10
A
OD2
ASP
10
1_555
A
CA
241
D
CA
CA
1_555
A
TYR
12
A
O
TYR
12
1_555
105.7
A
ASP
10
A
OD1
ASP
10
1_555
A
CA
241
D
CA
CA
1_555
A
TYR
12
A
O
TYR
12
1_555
71.8
A
ASP
10
A
OD2
ASP
10
1_555
A
CA
241
D
CA
CA
1_555
A
ASN
14
A
OD1
ASN
14
1_555
156.7
A
ASP
10
A
OD1
ASP
10
1_555
A
CA
241
D
CA
CA
1_555
A
ASN
14
A
OD1
ASN
14
1_555
152.3
A
TYR
12
A
O
TYR
12
1_555
A
CA
241
D
CA
CA
1_555
A
ASN
14
A
OD1
ASN
14
1_555
86.8
A
ASP
10
A
OD2
ASP
10
1_555
A
CA
241
D
CA
CA
1_555
A
ASP
19
A
OD2
ASP
19
1_555
73.6
A
ASP
10
A
OD1
ASP
10
1_555
A
CA
241
D
CA
CA
1_555
A
ASP
19
A
OD2
ASP
19
1_555
104.2
A
TYR
12
A
O
TYR
12
1_555
A
CA
241
D
CA
CA
1_555
A
ASP
19
A
OD2
ASP
19
1_555
81.6
A
ASN
14
A
OD1
ASN
14
1_555
A
CA
241
D
CA
CA
1_555
A
ASP
19
A
OD2
ASP
19
1_555
89.4
A
ASP
10
A
OD2
ASP
10
1_555
A
CA
241
D
CA
CA
1_555
A
HOH
535
G
O
HOH
1_555
66.6
A
ASP
10
A
OD1
ASP
10
1_555
A
CA
241
D
CA
CA
1_555
A
HOH
535
G
O
HOH
1_555
104.7
A
TYR
12
A
O
TYR
12
1_555
A
CA
241
D
CA
CA
1_555
A
HOH
535
G
O
HOH
1_555
171.0
A
ASN
14
A
OD1
ASN
14
1_555
A
CA
241
D
CA
CA
1_555
A
HOH
535
G
O
HOH
1_555
98.9
A
ASP
19
A
OD2
ASP
19
1_555
A
CA
241
D
CA
CA
1_555
A
HOH
535
G
O
HOH
1_555
91.5
A
ASP
10
A
OD2
ASP
10
1_555
A
CA
241
D
CA
CA
1_555
A
HOH
549
G
O
HOH
1_555
103.6
A
ASP
10
A
OD1
ASP
10
1_555
A
CA
241
D
CA
CA
1_555
A
HOH
549
G
O
HOH
1_555
70.6
A
TYR
12
A
O
TYR
12
1_555
A
CA
241
D
CA
CA
1_555
A
HOH
549
G
O
HOH
1_555
94.8
A
ASN
14
A
OD1
ASN
14
1_555
A
CA
241
D
CA
CA
1_555
A
HOH
549
G
O
HOH
1_555
94.6
A
ASP
19
A
OD2
ASP
19
1_555
A
CA
241
D
CA
CA
1_555
A
HOH
549
G
O
HOH
1_555
174.5
A
HOH
535
G
O
HOH
1_555
A
CA
241
D
CA
CA
1_555
A
HOH
549
G
O
HOH
1_555
91.6
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_555
-x,-y,z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
3_555
-x,y,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
4_555
x,-y,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
5_444
x-1/2,y-1/2,z-1/2
crystal symmetry operation
-31.6800000000
-43.1900000000
-44.6250000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
6_554
-x+1/2,-y+1/2,z-1/2
crystal symmetry operation
31.6800000000
43.1900000000
-44.6250000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
7_545
-x+1/2,y-1/2,-z+1/2
crystal symmetry operation
31.6800000000
-43.1900000000
44.6250000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
8_455
x-1/2,-y+1/2,-z+1/2
crystal symmetry operation
-31.6800000000
43.1900000000
44.6250000000
A
O
ALA
38
A
O
ALA
38
A
N
ILE
25
A
N
ILE
25
A
O
ASP
28
A
O
ASP
28
A
N
ALA
6
A
N
ALA
6
A
N
LEU
9
A
N
LEU
9
A
O
ILE
210
A
O
ILE
210
A
O
ALA
211
A
O
ALA
211
A
N
SER
94
A
N
SER
94
A
N
LEU
93
A
N
LEU
93
A
O
ALA
173
A
O
ALA
173
A
O
ARG
172
A
O
ARG
172
A
N
GLN
143
A
N
GLN
143
A
O
ALA
38
A
O
ALA
38
A
N
ILE
25
A
N
ILE
25
A
O
ASP
28
A
O
ASP
28
A
N
ALA
6
A
N
ALA
6
A
N
LEU
9
A
N
LEU
9
A
O
ILE
210
A
O
ILE
210
A
O
ALA
211
A
O
ALA
211
A
N
SER
94
A
N
SER
94
A
N
VAL
89
A
N
VAL
89
A
O
VAL
179
A
O
VAL
179
A
O
ALA
73
A
O
ALA
73
A
N
VAL
65
A
N
VAL
65
A
O
SER
62
A
O
SER
62
A
N
ILE
53
A
N
ILE
53
A
N
ILE
52
A
N
ILE
52
A
O
ALA
193
A
O
ALA
193
A
O
VAL
187
A
O
VAL
187
A
N
LYS
116
A
N
LYS
116
A
N
LEU
115
A
N
LEU
115
A
O
ASN
124
A
O
ASN
124
A
O
ALA
73
A
O
ALA
73
A
N
VAL
65
A
N
VAL
65
A
O
SER
62
A
O
SER
62
A
N
ILE
53
A
N
ILE
53
A
N
ILE
52
A
N
ILE
52
A
O
ALA
193
A
O
ALA
193
A
O
VAL
187
A
O
VAL
187
A
N
LYS
116
A
N
LYS
116
A
N
ILE
106
A
N
ILE
106
A
O
LEU
154
A
O
LEU
154
A
O
GLU
155
A
O
GLU
155
A
N
THR
147
A
N
THR
147
1
A
HOH
594
G
HOH
1
10.75
1.50
119.30
130.05
B
B
B
C
N
CA
TYR
PRO
PRO
4003
4004
4004
Y
1
A
ASN
14
-102.19
77.28
1
A
THR
150
-66.30
91.67
1
A
LEU
230
49.64
18.95
1
B
TYR
4001
71.28
155.95
1
B
TRP
4002
-172.59
0.97
1
B
PRO
4004
-10.55
-73.44
0.25
0.19
0.21
1.93
62.01
1520
17573
15289
9.9
87.1
RANDOM
1
Isotropic
THROUGHOUT
1
MOLECULAR REPLACEMENT
PDB ENTRY 1HQW
Engh & Huber
1.93
62.01
95
1983
13
0
1875
0.01
1.55
0.251
0.256
2.05
189
1961
0.248
0.248
2.21
250
2186
0.247
0.229
2.43
260
2441
0.241
0.211
2.78
323
2541
0.242
0.177
3.51
294
2706
0.235
0.153
62.01
288
2557
15.0
1.93
25.0
1JW6
17973
15289
1
1
0.0527
1
14.5
4.5
87.1
0.127
1.93
2.02
4.0
1961
1
3.2
80.7
model building
X-PLOR
refinement
X-PLOR
3.1
phasing
X-PLOR
Crystal Structure of the Complex of Concanavalin A and Hexapeptide
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
6
N
N
7
N
N
7
N
N
A
ASN
14
A
ASN
14
HELX_P
A
GLY
18
A
GLY
18
5
1
5
A
ASP
80
A
ASP
80
HELX_P
A
VAL
84
A
VAL
84
5
2
5
A
THR
226
A
THR
226
HELX_P
A
LEU
230
A
LEU
230
5
3
5
metalc
2.224
A
GLU
8
A
OE2
GLU
8
1_555
A
MN
240
C
MN
MN
1_555
metalc
2.299
A
ASP
10
A
OD2
ASP
10
1_555
A
MN
240
C
MN
MN
1_555
metalc
2.617
A
ASP
10
A
OD2
ASP
10
1_555
A
CA
241
D
CA
CA
1_555
metalc
2.481
A
ASP
10
A
OD1
ASP
10
1_555
A
CA
241
D
CA
CA
1_555
metalc
2.195
A
TYR
12
A
O
TYR
12
1_555
A
CA
241
D
CA
CA
1_555
metalc
2.192
A
ASN
14
A
OD1
ASN
14
1_555
A
CA
241
D
CA
CA
1_555
metalc
2.309
A
ASP
19
A
OD1
ASP
19
1_555
A
MN
240
C
MN
MN
1_555
metalc
2.432
A
ASP
19
A
OD2
ASP
19
1_555
A
CA
241
D
CA
CA
1_555
metalc
2.494
A
HIS
24
A
NE2
HIS
24
1_555
A
MN
240
C
MN
MN
1_555
metalc
2.125
A
MN
240
C
MN
MN
1_555
A
HOH
536
G
O
HOH
1_555
metalc
2.089
A
MN
240
C
MN
MN
1_555
A
HOH
537
G
O
HOH
1_555
metalc
2.337
A
CA
241
D
CA
CA
1_555
A
HOH
535
G
O
HOH
1_555
metalc
2.059
A
CA
241
D
CA
CA
1_555
A
HOH
549
G
O
HOH
1_555
SUGAR BINDING PROTEIN
Complex with Hexapeptide, SUGAR BINDING PROTEIN
A
ALA
207
A
ALA
207
1
A
ASP
208
A
ASP
208
0.49
CONA_CANEN
UNP
1
164
P02866
ADTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQNGKVGTAHIIYNSVDKRLSAVVSYPNADSATVSYDVD
LDNVLPEWVRVGLSASTGLYKETNTILSWSFTSKLKSN
CONA_CANEN
UNP
1
30
P02866
STHETNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHIWESSAVVASFEATFTFL
IKSPDSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN
1JW6
PDB
2
1
1JW6
164
281
1JW6
1
118
P02866
A
1
1
118
30
148
1JW6
119
237
P02866
A
2
119
237
4000
4005
1JW6
4000
4005
1JW6
B
3
1
6
7
6
6
7
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
LYS
36
A
LYS
36
A
LYS
39
A
LYS
39
A
HIS
24
A
HIS
24
A
ILE
29
A
ILE
29
A
ILE
4
A
ILE
4
A
ASP
10
A
ASP
10
A
GLY
209
A
GLY
209
A
SER
215
A
SER
215
A
TRP
88
A
TRP
88
A
SER
96
A
SER
96
A
VAL
170
A
VAL
170
A
PHE
175
A
PHE
175
A
LEU
140
A
LEU
140
A
GLY
144
A
GLY
144
A
LYS
36
A
LYS
36
A
LYS
39
A
LYS
39
A
HIS
24
A
HIS
24
A
ILE
29
A
ILE
29
A
ILE
4
A
ILE
4
A
ASP
10
A
ASP
10
A
GLY
209
A
GLY
209
A
SER
215
A
SER
215
A
TRP
88
A
TRP
88
A
SER
96
A
SER
96
A
VAL
179
A
VAL
179
A
HIS
180
A
HIS
180
A
ALA
73
A
ALA
73
A
ASP
78
A
ASP
78
A
ARG
60
A
ARG
60
A
SER
66
A
SER
66
A
VAL
47
A
VAL
47
A
ASN
55
A
ASN
55
A
ALA
186
A
ALA
186
A
LYS
200
A
LYS
200
A
THR
103
A
THR
103
A
SER
117
A
SER
117
A
THR
123
A
THR
123
A
PHE
130
A
PHE
130
A
ALA
73
A
ALA
73
A
ASP
78
A
ASP
78
A
ARG
60
A
ARG
60
A
SER
66
A
SER
66
A
VAL
47
A
VAL
47
A
ASN
55
A
ASN
55
A
ALA
186
A
ALA
186
A
LYS
200
A
LYS
200
A
THR
103
A
THR
103
A
SER
117
A
SER
117
A
ASN
153
A
ASN
153
A
GLU
155
A
GLU
155
A
THR
147
A
THR
147
A
THR
150
A
THR
150
BINDING SITE FOR RESIDUE MN A 240
A
MN
240
Software
6
BINDING SITE FOR RESIDUE CA A 241
A
CA
241
Software
6
BINDING SITE FOR RESIDUE PTD A 2001
A
PTD
2001
Software
2
BINDING SITE FOR RESIDUE IPA A 3001
A
IPA
3001
Software
2
A
GLU
8
A
GLU
8
6
1_555
A
ASP
10
A
ASP
10
6
1_555
A
ASP
19
A
ASP
19
6
1_555
A
HIS
24
A
HIS
24
6
1_555
A
HOH
536
G
HOH
6
1_555
A
HOH
537
G
HOH
6
1_555
A
ASP
10
A
ASP
10
6
1_555
A
TYR
12
A
TYR
12
6
1_555
A
ASN
14
A
ASN
14
6
1_555
A
ASP
19
A
ASP
19
6
1_555
A
HOH
535
G
HOH
6
1_555
A
HOH
549
G
HOH
6
1_555
A
LYS
39
A
LYS
39
2
1_555
B
TYR
4003
B
TYR
4
2
1_555
A
PRO
86
A
PRO
86
2
1_555
A
GLU
87
A
GLU
87
2
1_555
23
I 2 2 2