0.010297
0.000000
0.000000
0.000000
0.009815
0.000000
0.000000
0.000000
0.019066
0.00000
0.00000
0.00000
Ling, H.
Boudsocq, F.
Woodgate, R.
Yang, W.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
97.120
101.880
52.450
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C9 H12 Br N2 O8 P
387.078
n
5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
DNA linking
Ca 2
40.078
CALCIUM ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H16 N5 O12 P3
491.182
2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE
non-polymer
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C2 H6 O2
62.068
1,2-ETHANEDIOL
ETHYLENE GLYCOL
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
N
C
N
76
N
N
N
77
N
C
N
78
N
C
N
79
N
C
N
80
N
O
N
81
N
O
N
82
N
BR
N
83
R
C
N
84
N
C
N
85
S
C
N
86
R
C
N
87
N
O
N
88
N
O
N
89
N
C
N
90
N
O
N
91
N
P
N
92
N
O
N
93
N
O
N
94
N
O
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
CA
N
108
N
N
N
109
R
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
S
N
114
N
O
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
O
N
123
N
P
N
124
N
O
N
125
N
O
N
126
N
O
N
127
N
C
N
128
R
C
N
129
N
O
N
130
S
C
N
131
N
O
N
132
N
C
N
133
R
C
Y
134
N
N
Y
135
N
C
Y
136
N
N
Y
137
N
C
Y
138
N
C
N
139
N
N
Y
140
N
N
Y
141
N
C
Y
142
N
N
Y
143
N
C
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
P
N
160
N
O
N
161
N
O
N
162
N
O
N
163
N
C
N
164
R
C
N
165
N
O
N
166
S
C
N
167
N
O
N
168
N
C
N
169
R
C
N
170
N
N
N
171
N
C
N
172
N
O
N
173
N
N
N
174
N
C
N
175
N
N
N
176
N
C
N
177
N
C
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
O
N
193
N
P
N
194
N
O
N
195
N
O
N
196
N
O
N
197
N
C
N
198
R
C
N
199
N
O
N
200
S
C
N
201
N
O
N
202
N
C
N
203
R
C
Y
204
N
N
Y
205
N
C
Y
206
N
N
Y
207
N
C
N
208
N
C
N
209
N
O
N
210
N
N
N
211
N
C
N
212
N
N
N
213
N
N
Y
214
N
C
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
P
N
230
N
O
N
231
N
O
N
232
N
O
N
233
N
O
N
234
R
P
N
235
N
O
N
236
N
O
N
237
N
O
N
238
R
P
N
239
N
O
N
240
N
O
N
241
N
O
N
242
N
C
N
243
S
C
N
244
N
O
N
245
N
C
N
246
N
C
N
247
R
C
Y
248
N
N
Y
249
N
C
Y
250
N
N
Y
251
N
C
N
252
N
C
N
253
N
O
N
254
N
N
N
255
N
C
N
256
N
N
N
257
N
N
Y
258
N
C
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
O
N
276
N
P
N
277
N
O
N
278
N
O
N
279
N
O
N
280
N
C
N
281
R
C
N
282
N
O
N
283
S
C
N
284
N
O
N
285
N
C
N
286
R
C
N
287
N
N
N
288
N
C
N
289
N
O
N
290
N
N
N
291
N
C
N
292
N
O
N
293
N
C
N
294
N
C
N
295
N
C
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
C
N
312
N
O
N
313
N
C
N
314
N
O
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
N
326
N
C
N
327
N
C
N
328
N
O
N
329
N
N
N
330
N
O
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
N
N
342
S
C
N
343
N
C
N
344
N
O
N
345
N
C
N
346
N
C
N
347
N
C
N
348
N
O
N
349
N
O
N
350
N
O
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
N
N
361
N
C
N
362
N
C
N
363
N
O
N
364
N
O
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
N
N
371
S
C
N
372
N
C
N
373
N
O
N
374
N
C
Y
375
N
C
Y
376
N
N
Y
377
N
C
Y
378
N
C
Y
379
N
N
N
380
N
O
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
O
N
392
N
H
N
393
N
H
N
394
N
N
N
395
S
C
N
396
N
C
N
397
N
O
N
398
S
C
N
399
N
C
N
400
N
C
N
401
N
C
N
402
N
O
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
N
N
417
S
C
N
418
N
C
N
419
N
O
N
420
N
C
N
421
N
C
N
422
N
C
N
423
N
C
N
424
N
O
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
N
N
439
S
C
N
440
N
C
N
441
N
O
N
442
N
C
N
443
N
C
N
444
N
C
N
445
N
C
N
446
N
N
N
447
N
O
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
N
N
464
S
C
N
465
N
C
N
466
N
O
N
467
N
C
N
468
N
C
N
469
N
S
N
470
N
C
N
471
N
O
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
MG
N
484
N
N
N
485
S
C
N
486
N
C
N
487
N
O
N
488
N
C
Y
489
N
C
Y
490
N
C
Y
491
N
C
Y
492
N
C
Y
493
N
C
Y
494
N
C
N
495
N
O
N
496
N
H
N
497
N
H
N
498
N
H
N
499
N
H
N
500
N
H
N
501
N
H
N
502
N
H
N
503
N
H
N
504
N
H
N
505
N
H
N
506
N
H
N
507
N
N
N
508
S
C
N
509
N
C
N
510
N
O
N
511
N
C
N
512
N
C
N
513
N
C
N
514
N
O
N
515
N
H
N
516
N
H
N
517
N
H
N
518
N
H
N
519
N
H
N
520
N
H
N
521
N
H
N
522
N
H
N
523
N
H
N
524
N
N
N
525
S
C
N
526
N
C
N
527
N
O
N
528
N
C
N
529
N
O
N
530
N
O
N
531
N
H
N
532
N
H
N
533
N
H
N
534
N
H
N
535
N
H
N
536
N
H
N
537
N
H
N
538
N
N
N
539
S
C
N
540
N
C
N
541
N
O
N
542
R
C
N
543
N
O
N
544
N
C
N
545
N
O
N
546
N
H
N
547
N
H
N
548
N
H
N
549
N
H
N
550
N
H
N
551
N
H
N
552
N
H
N
553
N
H
N
554
N
H
N
555
N
N
N
556
S
C
N
557
N
C
N
558
N
O
N
559
N
C
Y
560
N
C
Y
561
N
C
Y
562
N
C
Y
563
N
C
Y
564
N
C
Y
565
N
C
N
566
N
O
N
567
N
O
N
568
N
H
N
569
N
H
N
570
N
H
N
571
N
H
N
572
N
H
N
573
N
H
N
574
N
H
N
575
N
H
N
576
N
H
N
577
N
H
N
578
N
H
N
579
N
N
N
580
S
C
N
581
N
C
N
582
N
O
N
583
N
C
N
584
N
C
N
585
N
C
N
586
N
O
N
587
N
H
N
588
N
H
N
589
N
H
N
590
N
H
N
591
N
H
N
592
N
H
N
593
N
H
N
594
N
H
N
595
N
H
N
596
N
H
N
597
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
doub
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
doub
N
79
N
doub
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
doub
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
doub
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
sing
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
Y
145
N
sing
Y
146
N
doub
N
147
N
sing
Y
148
N
doub
N
149
N
sing
N
150
N
sing
Y
151
N
sing
Y
152
N
doub
N
153
N
sing
Y
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
doub
N
181
N
sing
N
182
N
doub
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
doub
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
Y
213
N
sing
Y
214
N
sing
Y
215
N
doub
N
216
N
sing
Y
217
N
sing
N
218
N
sing
Y
219
N
doub
N
220
N
doub
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
doub
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
doub
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
doub
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
doub
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
Y
261
N
sing
Y
262
N
sing
Y
263
N
doub
N
264
N
sing
Y
265
N
sing
N
266
N
sing
Y
267
N
doub
N
268
N
doub
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
doub
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
doub
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
doub
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
doub
N
307
N
sing
N
308
N
sing
N
309
N
doub
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
doub
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
doub
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
doub
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
doub
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
doub
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
doub
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
Y
380
N
sing
Y
381
N
doub
Y
382
N
doub
N
383
N
sing
Y
384
N
sing
N
385
N
sing
Y
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
doub
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
doub
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
doub
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
doub
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
doub
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
Y
488
N
doub
Y
489
N
sing
Y
490
N
sing
N
491
N
sing
Y
492
N
doub
N
493
N
sing
Y
494
N
doub
N
495
N
sing
Y
496
N
sing
N
497
N
sing
N
498
N
sing
N
499
N
sing
N
500
N
sing
N
501
N
sing
N
502
N
sing
N
503
N
sing
N
504
N
sing
N
505
N
sing
N
506
N
doub
N
507
N
sing
N
508
N
sing
N
509
N
sing
N
510
N
sing
N
511
N
sing
N
512
N
sing
N
513
N
sing
N
514
N
sing
N
515
N
sing
N
516
N
sing
N
517
N
sing
N
518
N
sing
N
519
N
sing
N
520
N
sing
N
521
N
sing
N
522
N
sing
N
523
N
doub
N
524
N
sing
N
525
N
sing
N
526
N
sing
N
527
N
sing
N
528
N
sing
N
529
N
sing
N
530
N
sing
N
531
N
sing
N
532
N
sing
N
533
N
sing
N
534
N
sing
N
535
N
sing
N
536
N
doub
N
537
N
sing
N
538
N
sing
N
539
N
sing
N
540
N
sing
N
541
N
sing
N
542
N
sing
N
543
N
sing
N
544
N
sing
N
545
N
sing
N
546
N
sing
N
547
N
sing
N
548
N
sing
N
549
N
sing
N
550
N
sing
N
551
N
sing
N
552
N
doub
N
553
N
sing
N
554
N
sing
N
555
N
sing
N
556
N
sing
Y
557
N
doub
Y
558
N
sing
Y
559
N
sing
N
560
N
sing
Y
561
N
doub
N
562
N
sing
Y
563
N
doub
N
564
N
sing
Y
565
N
sing
N
566
N
sing
N
567
N
sing
N
568
N
sing
N
569
N
sing
N
570
N
sing
N
571
N
sing
N
572
N
sing
N
573
N
sing
N
574
N
sing
N
575
N
sing
N
576
N
doub
N
577
N
sing
N
578
N
sing
N
579
N
sing
N
580
N
sing
N
581
N
sing
N
582
N
sing
N
583
N
sing
N
584
N
sing
N
585
N
sing
N
586
N
sing
N
587
N
sing
US
Cell(Cambridge,Mass.)
CELLB5
0998
0092-8674
107
91
102
10.1016/S0092-8674(01)00515-3
11595188
Crystal structure of a Y-family DNA polymerase in action: a mechanism for error-prone and lesion-bypass replication.
2001
10.2210/pdb1jxl/pdb
pdb_00001jxl
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
mirrors
CCD
2001-06-01
MARRESEARCH
Si crystals
MAD
M
x-ray
1
0.9824
1.0
X9B
NSLS
0.9824
SYNCHROTRON
NSLS BEAMLINE X9B
3807.489
5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*T)-3'
1
syn
polymer
4874.819
5'-D(*T*TP*CP*GP*AP*AP*(BRU)P*CP*CP*TP*(BRU)P*CP*CP*CP*CP*C)-3'
1
syn
polymer
40257.879
DNA polymerase IV (family Y)
2.7.7.7
1
man
polymer
62.068
1,2-ETHANEDIOL
1
syn
non-polymer
40.078
CALCIUM ION
1
syn
non-polymer
24.305
MAGNESIUM ION
3
syn
non-polymer
491.182
2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE
1
syn
non-polymer
18.015
water
252
nat
water
no
no
(DG)(DG)(DG)(DG)(DG)(DA)(DA)(DG)(DG)(DA)(DT)(DT)
GGGGGAAGGATT
P
polydeoxyribonucleotide
no
yes
(DT)(DT)(DC)(DG)(DA)(DA)(BRU)(DC)(DC)(DT)(BRU)(DC)(DC)(DC)(DC)(DC)
TTCGAAUCCTUCCCCC
T
polydeoxyribonucleotide
no
no
MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEV
YQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKP
NGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTR
VRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQ
KILEEDERKIRRIGVRFSKFIEAIGLDKFFDT
MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEV
YQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKP
NGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTR
VRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQ
KILEEDERKIRRIGVRFSKFIEAIGLDKFFDT
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
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n
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n
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n
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n
n
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n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
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n
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n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Sulfolobus
Escherichia
Escherichia coli
sample
dpo4
2287
Sulfolobus solfataricus
469008
Escherichia coli BL21(DE3)
BL21(DE3)
plasmid
pet22b
1
2.64
53.39
VAPOR DIFFUSION, HANGING DROP
7
16% PEG 3350, 0.1M Hepes (pH7.0), 100 mM calcium acetate, 2.5% glycerol, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
PEG 3350
1
Hepes(pH7.0)
1
calcium acetate
1
glycerol
1
0.796
1
19
P
1
T
16
-4.599
P_DG1:DC16_T
1
-4.940
-0.215
0.011
-0.217
11.241
1
19
P
2
T
15
1.176
P_DG2:DC15_T
2
-4.675
-0.222
0.130
-0.107
2.911
1
19
P
3
T
14
0.201
P_DG3:DC14_T
3
-6.684
-0.030
0.285
-0.100
7.172
1
19
P
4
T
13
-0.751
P_DG4:DC13_T
4
-2.137
-0.329
0.219
-0.100
6.045
1
19
P
5
T
12
-5.163
P_DG5:DC12_T
5
-3.066
-0.166
0.069
-0.229
4.432
1
20
P
6
T
11
2.847
P_DA6:BRU11_T
6
-10.629
0.354
0.084
-0.015
3.463
1
20
P
7
T
10
5.668
P_DA7:DT10_T
7
-12.515
-0.023
-0.037
-0.186
-1.955
1
19
P
8
T
9
4.368
P_DG8:DC9_T
8
-9.201
-0.332
-0.006
-0.140
-13.655
1
19
P
9
T
8
3.114
P_DG9:DC8_T
9
-7.745
-0.095
-0.353
-0.084
-3.489
1
20
P
10
T
7
1.392
P_DA10:BRU7_T
10
0.383
0.072
-0.065
-0.230
6.754
1
20
P
11
T
6
4.307
P_DT11:DA6_T
11
-2.753
-0.128
-0.097
-0.142
20.227
1
20
P
12
T
5
7.675
P_DT12:DA5_T
12
2.229
-0.266
-0.614
-0.078
3.003
30.543
P
P
1
2
4.815
T
T
16
15
3.041
2.533
1.000
-0.155
PP_DG1DG2:DC15DC16_TT
1
-0.477
0.906
30.436
-0.759
-1.985
3.518
39.125
P
P
2
3
6.466
T
T
15
14
3.433
4.307
-1.140
-0.208
PP_DG2DG3:DC14DC15_TT
2
-5.772
8.664
38.482
-0.865
0.960
3.243
33.158
P
P
3
4
0.048
T
T
14
13
3.200
0.027
0.776
-0.177
PP_DG3DG4:DC13DC14_TT
3
2.175
-3.814
33.088
-0.315
-0.999
3.172
34.769
P
P
4
5
13.923
T
T
13
12
3.327
8.245
-0.573
-0.233
PP_DG4DG5:DC12DC13_TT
4
0.728
-1.230
33.799
-1.658
1.072
3.220
39.373
P
P
5
6
9.542
T
T
12
11
3.260
6.402
-0.315
-0.027
PP_DG5DA6:BRU11DC12_TT
5
-0.589
0.878
38.865
-0.797
0.398
3.262
33.231
P
P
6
7
7.768
T
T
11
10
3.288
4.428
0.262
-0.058
PP_DA6DA7:DT10BRU11_TT
6
1.861
-3.265
32.892
-0.847
-0.144
3.368
37.227
P
P
7
8
6.099
T
T
10
9
3.417
3.883
-0.065
-0.282
PP_DA7DG8:DC9DT10_TT
7
-2.726
4.280
36.934
-0.978
-0.275
3.558
37.473
P
P
8
9
5.944
T
T
9
8
3.649
3.812
-0.387
-0.567
PP_DG8DG9:DC8DC9_TT
8
1.566
-2.442
37.254
-1.435
0.829
3.094
33.662
P
P
9
10
5.124
T
T
8
7
3.070
2.956
-0.401
0.110
PP_DG9DA10:BRU7DC8_TT
9
-4.144
7.182
33.286
-0.266
0.052
3.169
29.905
P
P
10
11
-5.001
T
T
7
6
3.130
-2.578
0.257
-0.584
PP_DA10DT11:DA6BRU7_TT
10
0.101
-0.196
29.796
-0.617
-0.478
3.017
27.168
P
P
11
12
10.930
T
T
6
5
3.080
5.086
0.264
-0.084
PP_DT11DT12:DA5DA6_TT
11
4.079
-8.767
26.388
-1.389
0.408
pdbx_struct_conn_angle
struct_conn
struct_conn_type
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Derived calculations
Data collection
Database references
Derived calculations
Refinement description
1
0
2001-10-05
1
1
2008-04-27
1
2
2011-07-13
1
3
2019-11-20
1
4
2023-08-16
_struct_conn_type.id
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
same protein complexed with different substrates
RCSB
Y
RCSB
2001-09-07
REL
REL
EDO
1,2-ETHANEDIOL
CA
CALCIUM ION
MG
MAGNESIUM ION
DG3
2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE
HOH
water
1JX4
PDB
experimental model
EDO
1204
4
EDO
EDO
1204
T
CA
1402
5
CA
CA
1402
A
MG
1403
6
MG
MG
1403
A
MG
1404
6
MG
MG
1404
A
MG
1405
6
MG
MG
1405
A
DG3
401
7
DG3
DG3
401
A
WAT
519
8
HOH
HOH
519
P
WAT
522
8
HOH
HOH
522
P
WAT
529
8
HOH
HOH
529
P
WAT
533
8
HOH
HOH
533
P
WAT
552
8
HOH
HOH
552
P
WAT
554
8
HOH
HOH
554
P
WAT
556
8
HOH
HOH
556
P
WAT
561
8
HOH
HOH
561
P
WAT
564
8
HOH
HOH
564
P
WAT
566
8
HOH
HOH
566
P
WAT
567
8
HOH
HOH
567
P
WAT
571
8
HOH
HOH
571
P
WAT
599
8
HOH
HOH
599
P
WAT
610
8
HOH
HOH
610
P
WAT
620
8
HOH
HOH
620
P
WAT
630
8
HOH
HOH
630
P
WAT
635
8
HOH
HOH
635
P
WAT
637
8
HOH
HOH
637
P
WAT
650
8
HOH
HOH
650
P
WAT
674
8
HOH
HOH
674
P
WAT
686
8
HOH
HOH
686
P
WAT
697
8
HOH
HOH
697
P
WAT
729
8
HOH
HOH
729
P
WAT
744
8
HOH
HOH
744
P
WAT
761
8
HOH
HOH
761
P
WAT
765
8
HOH
HOH
765
P
WAT
786
8
HOH
HOH
786
P
WAT
509
8
HOH
HOH
509
T
WAT
512
8
HOH
HOH
512
T
WAT
526
8
HOH
HOH
526
T
WAT
532
8
HOH
HOH
532
T
WAT
542
8
HOH
HOH
542
T
WAT
546
8
HOH
HOH
546
T
WAT
568
8
HOH
HOH
568
T
WAT
570
8
HOH
HOH
570
T
WAT
578
8
HOH
HOH
578
T
WAT
583
8
HOH
HOH
583
T
WAT
584
8
HOH
HOH
584
T
WAT
594
8
HOH
HOH
594
T
WAT
604
8
HOH
HOH
604
T
WAT
642
8
HOH
HOH
642
T
WAT
644
8
HOH
HOH
644
T
WAT
645
8
HOH
HOH
645
T
WAT
648
8
HOH
HOH
648
T
WAT
662
8
HOH
HOH
662
T
WAT
676
8
HOH
HOH
676
T
WAT
678
8
HOH
HOH
678
T
WAT
679
8
HOH
HOH
679
T
WAT
687
8
HOH
HOH
687
T
WAT
689
8
HOH
HOH
689
T
WAT
690
8
HOH
HOH
690
T
WAT
693
8
HOH
HOH
693
T
WAT
702
8
HOH
HOH
702
T
WAT
711
8
HOH
HOH
711
T
WAT
723
8
HOH
HOH
723
T
WAT
749
8
HOH
HOH
749
T
WAT
769
8
HOH
HOH
769
T
WAT
775
8
HOH
HOH
775
T
WAT
788
8
HOH
HOH
788
T
WAT
501
8
HOH
HOH
501
A
WAT
502
8
HOH
HOH
502
A
WAT
503
8
HOH
HOH
503
A
WAT
504
8
HOH
HOH
504
A
WAT
505
8
HOH
HOH
505
A
WAT
506
8
HOH
HOH
506
A
WAT
507
8
HOH
HOH
507
A
WAT
508
8
HOH
HOH
508
A
WAT
510
8
HOH
HOH
510
A
WAT
511
8
HOH
HOH
511
A
WAT
513
8
HOH
HOH
513
A
WAT
514
8
HOH
HOH
514
A
WAT
515
8
HOH
HOH
515
A
WAT
516
8
HOH
HOH
516
A
WAT
517
8
HOH
HOH
517
A
WAT
518
8
HOH
HOH
518
A
WAT
520
8
HOH
HOH
520
A
WAT
521
8
HOH
HOH
521
A
WAT
523
8
HOH
HOH
523
A
WAT
524
8
HOH
HOH
524
A
WAT
525
8
HOH
HOH
525
A
WAT
527
8
HOH
HOH
527
A
WAT
528
8
HOH
HOH
528
A
WAT
530
8
HOH
HOH
530
A
WAT
531
8
HOH
HOH
531
A
WAT
534
8
HOH
HOH
534
A
WAT
535
8
HOH
HOH
535
A
WAT
536
8
HOH
HOH
536
A
WAT
537
8
HOH
HOH
537
A
WAT
538
8
HOH
HOH
538
A
WAT
539
8
HOH
HOH
539
A
WAT
540
8
HOH
HOH
540
A
WAT
541
8
HOH
HOH
541
A
WAT
543
8
HOH
HOH
543
A
WAT
544
8
HOH
HOH
544
A
WAT
545
8
HOH
HOH
545
A
WAT
547
8
HOH
HOH
547
A
WAT
548
8
HOH
HOH
548
A
WAT
549
8
HOH
HOH
549
A
WAT
550
8
HOH
HOH
550
A
WAT
551
8
HOH
HOH
551
A
WAT
553
8
HOH
HOH
553
A
WAT
557
8
HOH
HOH
557
A
WAT
558
8
HOH
HOH
558
A
WAT
559
8
HOH
HOH
559
A
WAT
560
8
HOH
HOH
560
A
WAT
562
8
HOH
HOH
562
A
WAT
563
8
HOH
HOH
563
A
WAT
565
8
HOH
HOH
565
A
WAT
569
8
HOH
HOH
569
A
WAT
572
8
HOH
HOH
572
A
WAT
573
8
HOH
HOH
573
A
WAT
574
8
HOH
HOH
574
A
WAT
575
8
HOH
HOH
575
A
WAT
576
8
HOH
HOH
576
A
WAT
577
8
HOH
HOH
577
A
WAT
579
8
HOH
HOH
579
A
WAT
580
8
HOH
HOH
580
A
WAT
581
8
HOH
HOH
581
A
WAT
582
8
HOH
HOH
582
A
WAT
585
8
HOH
HOH
585
A
WAT
586
8
HOH
HOH
586
A
WAT
587
8
HOH
HOH
587
A
WAT
588
8
HOH
HOH
588
A
WAT
589
8
HOH
HOH
589
A
WAT
590
8
HOH
HOH
590
A
WAT
591
8
HOH
HOH
591
A
WAT
592
8
HOH
HOH
592
A
WAT
593
8
HOH
HOH
593
A
WAT
595
8
HOH
HOH
595
A
WAT
596
8
HOH
HOH
596
A
WAT
597
8
HOH
HOH
597
A
WAT
598
8
HOH
HOH
598
A
WAT
600
8
HOH
HOH
600
A
WAT
601
8
HOH
HOH
601
A
WAT
602
8
HOH
HOH
602
A
WAT
603
8
HOH
HOH
603
A
WAT
605
8
HOH
HOH
605
A
WAT
607
8
HOH
HOH
607
A
WAT
608
8
HOH
HOH
608
A
WAT
609
8
HOH
HOH
609
A
WAT
611
8
HOH
HOH
611
A
WAT
612
8
HOH
HOH
612
A
WAT
613
8
HOH
HOH
613
A
WAT
614
8
HOH
HOH
614
A
WAT
615
8
HOH
HOH
615
A
WAT
616
8
HOH
HOH
616
A
WAT
618
8
HOH
HOH
618
A
WAT
619
8
HOH
HOH
619
A
WAT
621
8
HOH
HOH
621
A
WAT
622
8
HOH
HOH
622
A
WAT
623
8
HOH
HOH
623
A
WAT
624
8
HOH
HOH
624
A
WAT
625
8
HOH
HOH
625
A
WAT
626
8
HOH
HOH
626
A
WAT
627
8
HOH
HOH
627
A
WAT
628
8
HOH
HOH
628
A
WAT
629
8
HOH
HOH
629
A
WAT
631
8
HOH
HOH
631
A
WAT
632
8
HOH
HOH
632
A
WAT
633
8
HOH
HOH
633
A
WAT
634
8
HOH
HOH
634
A
WAT
636
8
HOH
HOH
636
A
WAT
638
8
HOH
HOH
638
A
WAT
639
8
HOH
HOH
639
A
WAT
640
8
HOH
HOH
640
A
WAT
641
8
HOH
HOH
641
A
WAT
643
8
HOH
HOH
643
A
WAT
647
8
HOH
HOH
647
A
WAT
649
8
HOH
HOH
649
A
WAT
651
8
HOH
HOH
651
A
WAT
652
8
HOH
HOH
652
A
WAT
653
8
HOH
HOH
653
A
WAT
654
8
HOH
HOH
654
A
WAT
655
8
HOH
HOH
655
A
WAT
656
8
HOH
HOH
656
A
WAT
657
8
HOH
HOH
657
A
WAT
658
8
HOH
HOH
658
A
WAT
659
8
HOH
HOH
659
A
WAT
660
8
HOH
HOH
660
A
WAT
661
8
HOH
HOH
661
A
WAT
665
8
HOH
HOH
665
A
WAT
667
8
HOH
HOH
667
A
WAT
669
8
HOH
HOH
669
A
WAT
670
8
HOH
HOH
670
A
WAT
671
8
HOH
HOH
671
A
WAT
673
8
HOH
HOH
673
A
WAT
675
8
HOH
HOH
675
A
WAT
677
8
HOH
HOH
677
A
WAT
681
8
HOH
HOH
681
A
WAT
683
8
HOH
HOH
683
A
WAT
684
8
HOH
HOH
684
A
WAT
685
8
HOH
HOH
685
A
WAT
688
8
HOH
HOH
688
A
WAT
691
8
HOH
HOH
691
A
WAT
694
8
HOH
HOH
694
A
WAT
695
8
HOH
HOH
695
A
WAT
696
8
HOH
HOH
696
A
WAT
700
8
HOH
HOH
700
A
WAT
701
8
HOH
HOH
701
A
WAT
703
8
HOH
HOH
703
A
WAT
704
8
HOH
HOH
704
A
WAT
706
8
HOH
HOH
706
A
WAT
708
8
HOH
HOH
708
A
WAT
709
8
HOH
HOH
709
A
WAT
710
8
HOH
HOH
710
A
WAT
712
8
HOH
HOH
712
A
WAT
714
8
HOH
HOH
714
A
WAT
715
8
HOH
HOH
715
A
WAT
716
8
HOH
HOH
716
A
WAT
717
8
HOH
HOH
717
A
WAT
720
8
HOH
HOH
720
A
WAT
722
8
HOH
HOH
722
A
WAT
724
8
HOH
HOH
724
A
WAT
725
8
HOH
HOH
725
A
WAT
727
8
HOH
HOH
727
A
WAT
728
8
HOH
HOH
728
A
WAT
731
8
HOH
HOH
731
A
WAT
735
8
HOH
HOH
735
A
WAT
736
8
HOH
HOH
736
A
WAT
737
8
HOH
HOH
737
A
WAT
739
8
HOH
HOH
739
A
WAT
740
8
HOH
HOH
740
A
WAT
741
8
HOH
HOH
741
A
WAT
742
8
HOH
HOH
742
A
WAT
743
8
HOH
HOH
743
A
WAT
745
8
HOH
HOH
745
A
WAT
748
8
HOH
HOH
748
A
WAT
750
8
HOH
HOH
750
A
WAT
751
8
HOH
HOH
751
A
WAT
752
8
HOH
HOH
752
A
WAT
753
8
HOH
HOH
753
A
WAT
754
8
HOH
HOH
754
A
WAT
755
8
HOH
HOH
755
A
WAT
756
8
HOH
HOH
756
A
WAT
757
8
HOH
HOH
757
A
WAT
758
8
HOH
HOH
758
A
WAT
759
8
HOH
HOH
759
A
WAT
760
8
HOH
HOH
760
A
WAT
762
8
HOH
HOH
762
A
WAT
763
8
HOH
HOH
763
A
WAT
770
8
HOH
HOH
770
A
WAT
771
8
HOH
HOH
771
A
WAT
772
8
HOH
HOH
772
A
WAT
773
8
HOH
HOH
773
A
WAT
774
8
HOH
HOH
774
A
WAT
777
8
HOH
HOH
777
A
WAT
779
8
HOH
HOH
779
A
WAT
782
8
HOH
HOH
782
A
WAT
785
8
HOH
HOH
785
A
WAT
787
8
HOH
HOH
787
A
WAT
789
8
HOH
HOH
789
A
WAT
790
8
HOH
HOH
790
A
G
1
n
1
DG
1
P
G
2
n
2
DG
2
P
G
3
n
3
DG
3
P
G
4
n
4
DG
4
P
G
5
n
5
DG
5
P
A
6
n
6
DA
6
P
A
7
n
7
DA
7
P
G
8
n
8
DG
8
P
G
9
n
9
DG
9
P
A
10
n
10
DA
10
P
T
11
n
11
DT
11
P
T
12
n
12
DT
12
P
n
1
1
T
T
1
n
2
DT
2
T
C
3
n
3
DC
3
T
G
4
n
4
DG
4
T
A
5
n
5
DA
5
T
A
6
n
6
DA
6
T
U
7
n
7
BRU
7
T
C
8
n
8
DC
8
T
C
9
n
9
DC
9
T
T
10
n
10
DT
10
T
U
11
n
11
BRU
11
T
C
12
n
12
DC
12
T
C
13
n
13
DC
13
T
C
14
n
14
DC
14
T
C
15
n
15
DC
15
T
C
16
n
16
DC
16
T
MET
1
n
1
MET
1
A
ILE
2
n
2
ILE
2
A
VAL
3
n
3
VAL
3
A
LEU
4
n
4
LEU
4
A
PHE
5
n
5
PHE
5
A
VAL
6
n
6
VAL
6
A
ASP
7
n
7
ASP
7
A
PHE
8
n
8
PHE
8
A
ASP
9
n
9
ASP
9
A
TYR
10
n
10
TYR
10
A
PHE
11
n
11
PHE
11
A
TYR
12
n
12
TYR
12
A
ALA
13
n
13
ALA
13
A
GLN
14
n
14
GLN
14
A
VAL
15
n
15
VAL
15
A
GLU
16
n
16
GLU
16
A
GLU
17
n
17
GLU
17
A
VAL
18
n
18
VAL
18
A
LEU
19
n
19
LEU
19
A
ASN
20
n
20
ASN
20
A
PRO
21
n
21
PRO
21
A
SER
22
n
22
SER
22
A
LEU
23
n
23
LEU
23
A
LYS
24
n
24
LYS
24
A
GLY
25
n
25
GLY
25
A
LYS
26
n
26
LYS
26
A
PRO
27
n
27
PRO
27
A
VAL
28
n
28
VAL
28
A
VAL
29
n
29
VAL
29
A
VAL
30
n
30
VAL
30
A
CYS
31
n
31
CYS
31
A
VAL
32
n
32
VAL
32
A
PHE
33
n
33
PHE
33
A
SER
34
n
34
SER
34
A
GLY
35
n
35
GLY
35
A
ARG
36
n
36
ARG
36
A
PHE
37
n
37
PHE
37
A
GLU
38
n
38
GLU
38
A
ASP
39
n
39
ASP
39
A
SER
40
n
40
SER
40
A
GLY
41
n
41
GLY
41
A
ALA
42
n
42
ALA
42
A
VAL
43
n
43
VAL
43
A
ALA
44
n
44
ALA
44
A
THR
45
n
45
THR
45
A
ALA
46
n
46
ALA
46
A
ASN
47
n
47
ASN
47
A
TYR
48
n
48
TYR
48
A
GLU
49
n
49
GLU
49
A
ALA
50
n
50
ALA
50
A
ARG
51
n
51
ARG
51
A
LYS
52
n
52
LYS
52
A
PHE
53
n
53
PHE
53
A
GLY
54
n
54
GLY
54
A
VAL
55
n
55
VAL
55
A
LYS
56
n
56
LYS
56
A
ALA
57
n
57
ALA
57
A
GLY
58
n
58
GLY
58
A
ILE
59
n
59
ILE
59
A
PRO
60
n
60
PRO
60
A
ILE
61
n
61
ILE
61
A
VAL
62
n
62
VAL
62
A
GLU
63
n
63
GLU
63
A
ALA
64
n
64
ALA
64
A
LYS
65
n
65
LYS
65
A
LYS
66
n
66
LYS
66
A
ILE
67
n
67
ILE
67
A
LEU
68
n
68
LEU
68
A
PRO
69
n
69
PRO
69
A
ASN
70
n
70
ASN
70
A
ALA
71
n
71
ALA
71
A
VAL
72
n
72
VAL
72
A
TYR
73
n
73
TYR
73
A
LEU
74
n
74
LEU
74
A
PRO
75
n
75
PRO
75
A
MET
76
n
76
MET
76
A
ARG
77
n
77
ARG
77
A
LYS
78
n
78
LYS
78
A
GLU
79
n
79
GLU
79
A
VAL
80
n
80
VAL
80
A
TYR
81
n
81
TYR
81
A
GLN
82
n
82
GLN
82
A
GLN
83
n
83
GLN
83
A
VAL
84
n
84
VAL
84
A
SER
85
n
85
SER
85
A
SER
86
n
86
SER
86
A
ARG
87
n
87
ARG
87
A
ILE
88
n
88
ILE
88
A
MET
89
n
89
MET
89
A
ASN
90
n
90
ASN
90
A
LEU
91
n
91
LEU
91
A
LEU
92
n
92
LEU
92
A
ARG
93
n
93
ARG
93
A
GLU
94
n
94
GLU
94
A
TYR
95
n
95
TYR
95
A
SER
96
n
96
SER
96
A
GLU
97
n
97
GLU
97
A
LYS
98
n
98
LYS
98
A
ILE
99
n
99
ILE
99
A
GLU
100
n
100
GLU
100
A
ILE
101
n
101
ILE
101
A
ALA
102
n
102
ALA
102
A
SER
103
n
103
SER
103
A
ILE
104
n
104
ILE
104
A
ASP
105
n
105
ASP
105
A
GLU
106
n
106
GLU
106
A
ALA
107
n
107
ALA
107
A
TYR
108
n
108
TYR
108
A
LEU
109
n
109
LEU
109
A
ASP
110
n
110
ASP
110
A
ILE
111
n
111
ILE
111
A
SER
112
n
112
SER
112
A
ASP
113
n
113
ASP
113
A
LYS
114
n
114
LYS
114
A
VAL
115
n
115
VAL
115
A
ARG
116
n
116
ARG
116
A
ASP
117
n
117
ASP
117
A
TYR
118
n
118
TYR
118
A
ARG
119
n
119
ARG
119
A
GLU
120
n
120
GLU
120
A
ALA
121
n
121
ALA
121
A
TYR
122
n
122
TYR
122
A
ASN
123
n
123
ASN
123
A
LEU
124
n
124
LEU
124
A
GLY
125
n
125
GLY
125
A
LEU
126
n
126
LEU
126
A
GLU
127
n
127
GLU
127
A
ILE
128
n
128
ILE
128
A
LYS
129
n
129
LYS
129
A
ASN
130
n
130
ASN
130
A
LYS
131
n
131
LYS
131
A
ILE
132
n
132
ILE
132
A
LEU
133
n
133
LEU
133
A
GLU
134
n
134
GLU
134
A
LYS
135
n
135
LYS
135
A
GLU
136
n
136
GLU
136
A
LYS
137
n
137
LYS
137
A
ILE
138
n
138
ILE
138
A
THR
139
n
139
THR
139
A
VAL
140
n
140
VAL
140
A
THR
141
n
141
THR
141
A
VAL
142
n
142
VAL
142
A
GLY
143
n
143
GLY
143
A
ILE
144
n
144
ILE
144
A
SER
145
n
145
SER
145
A
LYS
146
n
146
LYS
146
A
ASN
147
n
147
ASN
147
A
LYS
148
n
148
LYS
148
A
VAL
149
n
149
VAL
149
A
PHE
150
n
150
PHE
150
A
ALA
151
n
151
ALA
151
A
LYS
152
n
152
LYS
152
A
ILE
153
n
153
ILE
153
A
ALA
154
n
154
ALA
154
A
ALA
155
n
155
ALA
155
A
ASP
156
n
156
ASP
156
A
MET
157
n
157
MET
157
A
ALA
158
n
158
ALA
158
A
LYS
159
n
159
LYS
159
A
PRO
160
n
160
PRO
160
A
ASN
161
n
161
ASN
161
A
GLY
162
n
162
GLY
162
A
ILE
163
n
163
ILE
163
A
LYS
164
n
164
LYS
164
A
VAL
165
n
165
VAL
165
A
ILE
166
n
166
ILE
166
A
ASP
167
n
167
ASP
167
A
ASP
168
n
168
ASP
168
A
GLU
169
n
169
GLU
169
A
GLU
170
n
170
GLU
170
A
VAL
171
n
171
VAL
171
A
LYS
172
n
172
LYS
172
A
ARG
173
n
173
ARG
173
A
LEU
174
n
174
LEU
174
A
ILE
175
n
175
ILE
175
A
ARG
176
n
176
ARG
176
A
GLU
177
n
177
GLU
177
A
LEU
178
n
178
LEU
178
A
ASP
179
n
179
ASP
179
A
ILE
180
n
180
ILE
180
A
ALA
181
n
181
ALA
181
A
ASP
182
n
182
ASP
182
A
VAL
183
n
183
VAL
183
A
PRO
184
n
184
PRO
184
A
GLY
185
n
185
GLY
185
A
ILE
186
n
186
ILE
186
A
GLY
187
n
187
GLY
187
A
ASN
188
n
188
ASN
188
A
ILE
189
n
189
ILE
189
A
THR
190
n
190
THR
190
A
ALA
191
n
191
ALA
191
A
GLU
192
n
192
GLU
192
A
LYS
193
n
193
LYS
193
A
LEU
194
n
194
LEU
194
A
LYS
195
n
195
LYS
195
A
LYS
196
n
196
LYS
196
A
LEU
197
n
197
LEU
197
A
GLY
198
n
198
GLY
198
A
ILE
199
n
199
ILE
199
A
ASN
200
n
200
ASN
200
A
LYS
201
n
201
LYS
201
A
LEU
202
n
202
LEU
202
A
VAL
203
n
203
VAL
203
A
ASP
204
n
204
ASP
204
A
THR
205
n
205
THR
205
A
LEU
206
n
206
LEU
206
A
SER
207
n
207
SER
207
A
ILE
208
n
208
ILE
208
A
GLU
209
n
209
GLU
209
A
PHE
210
n
210
PHE
210
A
ASP
211
n
211
ASP
211
A
LYS
212
n
212
LYS
212
A
LEU
213
n
213
LEU
213
A
LYS
214
n
214
LYS
214
A
GLY
215
n
215
GLY
215
A
MET
216
n
216
MET
216
A
ILE
217
n
217
ILE
217
A
GLY
218
n
218
GLY
218
A
GLU
219
n
219
GLU
219
A
ALA
220
n
220
ALA
220
A
LYS
221
n
221
LYS
221
A
ALA
222
n
222
ALA
222
A
LYS
223
n
223
LYS
223
A
TYR
224
n
224
TYR
224
A
LEU
225
n
225
LEU
225
A
ILE
226
n
226
ILE
226
A
SER
227
n
227
SER
227
A
LEU
228
n
228
LEU
228
A
ALA
229
n
229
ALA
229
A
ARG
230
n
230
ARG
230
A
ASP
231
n
231
ASP
231
A
GLU
232
n
232
GLU
232
A
TYR
233
n
233
TYR
233
A
ASN
234
n
234
ASN
234
A
GLU
235
n
235
GLU
235
A
PRO
236
n
236
PRO
236
A
ILE
237
n
237
ILE
237
A
ARG
238
n
238
ARG
238
A
THR
239
n
239
THR
239
A
ARG
240
n
240
ARG
240
A
VAL
241
n
241
VAL
241
A
ARG
242
n
242
ARG
242
A
LYS
243
n
243
LYS
243
A
SER
244
n
244
SER
244
A
ILE
245
n
245
ILE
245
A
GLY
246
n
246
GLY
246
A
ARG
247
n
247
ARG
247
A
ILE
248
n
248
ILE
248
A
VAL
249
n
249
VAL
249
A
THR
250
n
250
THR
250
A
MET
251
n
251
MET
251
A
LYS
252
n
252
LYS
252
A
ARG
253
n
253
ARG
253
A
ASN
254
n
254
ASN
254
A
SER
255
n
255
SER
255
A
ARG
256
n
256
ARG
256
A
ASN
257
n
257
ASN
257
A
LEU
258
n
258
LEU
258
A
GLU
259
n
259
GLU
259
A
GLU
260
n
260
GLU
260
A
ILE
261
n
261
ILE
261
A
LYS
262
n
262
LYS
262
A
PRO
263
n
263
PRO
263
A
TYR
264
n
264
TYR
264
A
LEU
265
n
265
LEU
265
A
PHE
266
n
266
PHE
266
A
ARG
267
n
267
ARG
267
A
ALA
268
n
268
ALA
268
A
ILE
269
n
269
ILE
269
A
GLU
270
n
270
GLU
270
A
GLU
271
n
271
GLU
271
A
SER
272
n
272
SER
272
A
TYR
273
n
273
TYR
273
A
TYR
274
n
274
TYR
274
A
LYS
275
n
275
LYS
275
A
LEU
276
n
276
LEU
276
A
ASP
277
n
277
ASP
277
A
LYS
278
n
278
LYS
278
A
ARG
279
n
279
ARG
279
A
ILE
280
n
280
ILE
280
A
PRO
281
n
281
PRO
281
A
LYS
282
n
282
LYS
282
A
ALA
283
n
283
ALA
283
A
ILE
284
n
284
ILE
284
A
HIS
285
n
285
HIS
285
A
VAL
286
n
286
VAL
286
A
VAL
287
n
287
VAL
287
A
ALA
288
n
288
ALA
288
A
VAL
289
n
289
VAL
289
A
THR
290
n
290
THR
290
A
GLU
291
n
291
GLU
291
A
ASP
292
n
292
ASP
292
A
LEU
293
n
293
LEU
293
A
ASP
294
n
294
ASP
294
A
ILE
295
n
295
ILE
295
A
VAL
296
n
296
VAL
296
A
SER
297
n
297
SER
297
A
ARG
298
n
298
ARG
298
A
GLY
299
n
299
GLY
299
A
ARG
300
n
300
ARG
300
A
THR
301
n
301
THR
301
A
PHE
302
n
302
PHE
302
A
PRO
303
n
303
PRO
303
A
HIS
304
n
304
HIS
304
A
GLY
305
n
305
GLY
305
A
ILE
306
n
306
ILE
306
A
SER
307
n
307
SER
307
A
LYS
308
n
308
LYS
308
A
GLU
309
n
309
GLU
309
A
THR
310
n
310
THR
310
A
ALA
311
n
311
ALA
311
A
TYR
312
n
312
TYR
312
A
SER
313
n
313
SER
313
A
GLU
314
n
314
GLU
314
A
SER
315
n
315
SER
315
A
VAL
316
n
316
VAL
316
A
LYS
317
n
317
LYS
317
A
LEU
318
n
318
LEU
318
A
LEU
319
n
319
LEU
319
A
GLN
320
n
320
GLN
320
A
LYS
321
n
321
LYS
321
A
ILE
322
n
322
ILE
322
A
LEU
323
n
323
LEU
323
A
GLU
324
n
324
GLU
324
A
GLU
325
n
325
GLU
325
A
ASP
326
n
326
ASP
326
A
GLU
327
n
327
GLU
327
A
ARG
328
n
328
ARG
328
A
LYS
329
n
329
LYS
329
A
ILE
330
n
330
ILE
330
A
ARG
331
n
331
ARG
331
A
ARG
332
n
332
ARG
332
A
ILE
333
n
333
ILE
333
A
GLY
334
n
334
GLY
334
A
VAL
335
n
335
VAL
335
A
ARG
336
n
336
ARG
336
A
PHE
337
n
337
PHE
337
A
SER
338
n
338
SER
338
A
LYS
339
n
339
LYS
339
A
PHE
340
n
340
PHE
340
A
ILE
341
n
341
ILE
341
A
n
342
342
A
n
343
343
A
n
344
344
A
n
345
345
A
n
346
346
A
n
347
347
A
n
348
348
A
n
349
349
A
n
350
350
A
n
351
351
A
n
352
352
A
author_defined_assembly
3
trimeric
P
HOH
519
J
O
HOH
1_555
A
MG
1405
H
MG
MG
1_555
P
HOH
674
J
O
HOH
1_555
86.4
P
HOH
519
J
O
HOH
1_555
A
MG
1405
H
MG
MG
1_555
A
ALA
181
C
O
ALA
181
1_555
83.9
P
HOH
674
J
O
HOH
1_555
A
MG
1405
H
MG
MG
1_555
A
ALA
181
C
O
ALA
181
1_555
170.3
P
HOH
519
J
O
HOH
1_555
A
MG
1405
H
MG
MG
1_555
A
ILE
186
C
O
ILE
186
1_555
71.7
P
HOH
674
J
O
HOH
1_555
A
MG
1405
H
MG
MG
1_555
A
ILE
186
C
O
ILE
186
1_555
89.9
A
ALA
181
C
O
ALA
181
1_555
A
MG
1405
H
MG
MG
1_555
A
ILE
186
C
O
ILE
186
1_555
85.6
P
HOH
519
J
O
HOH
1_555
A
MG
1405
H
MG
MG
1_555
A
HOH
600
L
O
HOH
1_555
71.6
P
HOH
674
J
O
HOH
1_555
A
MG
1405
H
MG
MG
1_555
A
HOH
600
L
O
HOH
1_555
84.0
A
ALA
181
C
O
ALA
181
1_555
A
MG
1405
H
MG
MG
1_555
A
HOH
600
L
O
HOH
1_555
94.5
A
ILE
186
C
O
ILE
186
1_555
A
MG
1405
H
MG
MG
1_555
A
HOH
600
L
O
HOH
1_555
143.1
P
HOH
519
J
O
HOH
1_555
A
MG
1405
H
MG
MG
1_555
A
HOH
685
L
O
HOH
1_555
139.0
P
HOH
674
J
O
HOH
1_555
A
MG
1405
H
MG
MG
1_555
A
HOH
685
L
O
HOH
1_555
99.7
A
ALA
181
C
O
ALA
181
1_555
A
MG
1405
H
MG
MG
1_555
A
HOH
685
L
O
HOH
1_555
88.7
A
ILE
186
C
O
ILE
186
1_555
A
MG
1405
H
MG
MG
1_555
A
HOH
685
L
O
HOH
1_555
147.8
A
HOH
600
L
O
HOH
1_555
A
MG
1405
H
MG
MG
1_555
A
HOH
685
L
O
HOH
1_555
68.9
P
HOH
519
J
O
HOH
1_555
A
MG
1405
H
MG
MG
1_555
A
HOH
688
L
O
HOH
1_555
149.1
P
HOH
674
J
O
HOH
1_555
A
MG
1405
H
MG
MG
1_555
A
HOH
688
L
O
HOH
1_555
87.8
A
ALA
181
C
O
ALA
181
1_555
A
MG
1405
H
MG
MG
1_555
A
HOH
688
L
O
HOH
1_555
99.6
A
ILE
186
C
O
ILE
186
1_555
A
MG
1405
H
MG
MG
1_555
A
HOH
688
L
O
HOH
1_555
77.9
A
HOH
600
L
O
HOH
1_555
A
MG
1405
H
MG
MG
1_555
A
HOH
688
L
O
HOH
1_555
137.8
A
HOH
685
L
O
HOH
1_555
A
MG
1405
H
MG
MG
1_555
A
HOH
688
L
O
HOH
1_555
71.9
A
ASP
7
C
OD1
ASP
7
1_555
A
CA
1402
E
CA
CA
1_555
A
PHE
8
C
O
PHE
8
1_555
85.8
A
ASP
7
C
OD1
ASP
7
1_555
A
CA
1402
E
CA
CA
1_555
A
ASP
105
C
OD2
ASP
105
1_555
96.0
A
PHE
8
C
O
PHE
8
1_555
A
CA
1402
E
CA
CA
1_555
A
ASP
105
C
OD2
ASP
105
1_555
96.1
A
ASP
7
C
OD1
ASP
7
1_555
A
CA
1402
E
CA
CA
1_555
A
DG3
401
I
O2G
DG3
1_555
169.1
A
PHE
8
C
O
PHE
8
1_555
A
CA
1402
E
CA
CA
1_555
A
DG3
401
I
O2G
DG3
1_555
91.2
A
ASP
105
C
OD2
ASP
105
1_555
A
CA
1402
E
CA
CA
1_555
A
DG3
401
I
O2G
DG3
1_555
94.7
A
ASP
7
C
OD1
ASP
7
1_555
A
CA
1402
E
CA
CA
1_555
A
DG3
401
I
O2B
DG3
1_555
90.9
A
PHE
8
C
O
PHE
8
1_555
A
CA
1402
E
CA
CA
1_555
A
DG3
401
I
O2B
DG3
1_555
175.1
A
ASP
105
C
OD2
ASP
105
1_555
A
CA
1402
E
CA
CA
1_555
A
DG3
401
I
O2B
DG3
1_555
87.8
A
DG3
401
I
O2G
DG3
1_555
A
CA
1402
E
CA
CA
1_555
A
DG3
401
I
O2B
DG3
1_555
91.3
A
ASP
7
C
OD1
ASP
7
1_555
A
CA
1402
E
CA
CA
1_555
A
HOH
671
L
O
HOH
1_555
76.7
A
PHE
8
C
O
PHE
8
1_555
A
CA
1402
E
CA
CA
1_555
A
HOH
671
L
O
HOH
1_555
99.2
A
ASP
105
C
OD2
ASP
105
1_555
A
CA
1402
E
CA
CA
1_555
A
HOH
671
L
O
HOH
1_555
162.4
A
DG3
401
I
O2G
DG3
1_555
A
CA
1402
E
CA
CA
1_555
A
HOH
671
L
O
HOH
1_555
93.5
A
DG3
401
I
O2B
DG3
1_555
A
CA
1402
E
CA
CA
1_555
A
HOH
671
L
O
HOH
1_555
76.5
A
ASP
7
C
OD2
ASP
7
1_555
A
MG
1403
F
MG
MG
1_555
A
GLU
106
C
OE2
GLU
106
1_555
90.7
A
ASP
7
C
OD2
ASP
7
1_555
A
MG
1403
F
MG
MG
1_555
A
DG3
401
I
O2A
DG3
1_555
132.2
A
GLU
106
C
OE2
GLU
106
1_555
A
MG
1403
F
MG
MG
1_555
A
DG3
401
I
O2A
DG3
1_555
76.1
A
ASP
7
C
OD2
ASP
7
1_555
A
MG
1403
F
MG
MG
1_555
A
DG3
401
I
O2B
DG3
1_555
96.2
A
GLU
106
C
OE2
GLU
106
1_555
A
MG
1403
F
MG
MG
1_555
A
DG3
401
I
O2B
DG3
1_555
151.6
A
DG3
401
I
O2A
DG3
1_555
A
MG
1403
F
MG
MG
1_555
A
DG3
401
I
O2B
DG3
1_555
79.0
A
DG3
401
I
O1G
DG3
1_555
A
MG
1404
G
MG
MG
1_555
A
DG3
401
I
O1B
DG3
1_555
61.6
A
DG3
401
I
O1G
DG3
1_555
A
MG
1404
G
MG
MG
1_555
A
HOH
671
L
O
HOH
1_555
114.7
A
DG3
401
I
O1B
DG3
1_555
A
MG
1404
G
MG
MG
1_555
A
HOH
671
L
O
HOH
1_555
91.7
A
DG3
401
I
O1G
DG3
1_555
A
MG
1404
G
MG
MG
1_555
A
HOH
683
L
O
HOH
1_555
108.8
A
DG3
401
I
O1B
DG3
1_555
A
MG
1404
G
MG
MG
1_555
A
HOH
683
L
O
HOH
1_555
64.7
A
HOH
671
L
O
HOH
1_555
A
MG
1404
G
MG
MG
1_555
A
HOH
683
L
O
HOH
1_555
110.0
T
BRU
7
B
BRU
7
DU
T
BRU
11
B
BRU
11
DU
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
GLU
100
C
N
GLU
100
A
O
TYR
108
C
O
TYR
108
A
O
LEU
109
C
O
LEU
109
A
N
LEU
4
C
N
LEU
4
A
N
VAL
3
C
N
VAL
3
A
O
SER
145
C
O
SER
145
A
N
ILE
144
C
N
ILE
144
A
O
LYS
164
C
O
LYS
164
A
O
ALA
42
C
O
ALA
42
A
N
VAL
32
C
N
VAL
32
A
N
CYS
31
C
N
CYS
31
A
O
LEU
74
C
O
LEU
74
A
N
SER
255
C
N
SER
255
A
O
ILE
330
C
O
ILE
330
A
O
ARG
331
C
O
ARG
331
A
N
VAL
289
C
N
VAL
289
A
N
VAL
286
C
N
VAL
286
A
O
ARG
298
C
O
ARG
298
1
T
P
DT
2
B
P
DT
2
1
Y
1
T
OP1
DT
2
B
OP1
DT
2
1
Y
1
T
OP2
DT
2
B
OP2
DT
2
1
Y
1
T
DT
1
B
DT
1
1
Y
1
A
GLU
342
C
GLU
342
1
Y
1
A
ALA
343
C
ALA
343
1
Y
1
A
ILE
344
C
ILE
344
1
Y
1
A
GLY
345
C
GLY
345
1
Y
1
A
LEU
346
C
LEU
346
1
Y
1
A
ASP
347
C
ASP
347
1
Y
1
A
LYS
348
C
LYS
348
1
Y
1
A
PHE
349
C
PHE
349
1
Y
1
A
PHE
350
C
PHE
350
1
Y
1
A
ASP
351
C
ASP
351
1
Y
1
A
THR
352
C
THR
352
1
Y
1
T
T
O3'
C3'
DA
DA
5
5
-0.037
0.006
1.419
1.382
N
1
A
A
CG
CD
GLU
GLU
79
79
0.091
0.015
1.515
1.606
N
1
A
TYR
10
A
35.88
45.21
1
A
TYR
10
B
27.60
46.47
1
A
PHE
11
-29.87
-62.42
1
A
PHE
11
-29.38
-62.42
1
A
SER
96
-173.03
137.82
1
A
SER
145
-169.88
-165.82
1
A
ASP
277
-3.10
87.08
1
A
LYS
278
78.32
-11.23
1
A
ASP
292
-91.93
30.71
41.7
-7.242
0.00
0.00
3.213
0.00
4.028
0.278
0.221
0.278
0.278
2.10
500
1452
31140
30292
97.3
identical to the corresponding
data randomly selected in 1JX4 and randomly
selected in the data pool which does not exist in 1JX4 dataset
1
Isotropic
THROUGHOUT
0
FOURIER SYNTHESIS
1JX4
Engh & Huber
2.10
500
252
3619
40
545
2782
0.016
1.74
0.432
0.319
2.14
50
37.9
2.1
500.0
1JXL
31140
30292
0.0
-1.0
0.033
0.033
1
24.4
3.1
97.3
0.331
2.10
2.14
4.1
1490
0.331
3.0
98.1
refinement
CNS
data reduction
DENZO
data scaling
SCALEPACK
phasing
CNS
Crystal Structure of a Y-Family DNA Polymerase in a Ternary Complex with DNA Substrates and an Incoming Nucleotide
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
6
N
N
6
N
N
6
N
N
7
N
N
8
N
N
8
N
N
8
N
N
A
TYR
10
C
TYR
10
HELX_P
A
ASN
20
C
ASN
20
1
1
11
A
PRO
21
C
PRO
21
HELX_P
A
LYS
24
C
LYS
24
5
2
4
A
ASN
47
C
ASN
47
HELX_P
A
LYS
52
C
LYS
52
1
3
6
A
PRO
60
C
PRO
60
HELX_P
A
LEU
68
C
LEU
68
1
4
9
A
ARG
77
C
ARG
77
HELX_P
A
ARG
93
C
ARG
93
1
5
17
A
GLU
94
C
GLU
94
HELX_P
A
SER
96
C
SER
96
5
6
3
A
ASP
117
C
ASP
117
HELX_P
A
LYS
137
C
LYS
137
1
7
21
A
ASN
147
C
ASN
147
HELX_P
A
LYS
159
C
LYS
159
1
8
13
A
ASP
167
C
ASP
167
HELX_P
A
LEU
178
C
LEU
178
1
9
12
A
ASP
179
C
ASP
179
HELX_P
A
VAL
183
C
VAL
183
5
10
5
A
GLY
187
C
GLY
187
HELX_P
A
LEU
197
C
LEU
197
1
11
11
A
VAL
203
C
VAL
203
HELX_P
A
ILE
208
C
ILE
208
1
12
6
A
GLU
209
C
GLU
209
HELX_P
A
GLY
218
C
GLY
218
1
13
10
A
GLY
218
C
GLY
218
HELX_P
A
ARG
230
C
ARG
230
1
14
13
A
ASN
257
C
ASN
257
HELX_P
A
LEU
276
C
LEU
276
1
15
20
A
SER
307
C
SER
307
HELX_P
A
ASP
326
C
ASP
326
1
16
20
covale
1.602
both
T
DA
6
B
O3'
DA
6
1_555
T
BRU
7
B
P
BRU
7
1_555
covale
1.618
both
T
BRU
7
B
O3'
BRU
7
1_555
T
DC
8
B
P
DC
8
1_555
covale
1.619
both
T
DT
10
B
O3'
DT
10
1_555
T
BRU
11
B
P
BRU
11
1_555
covale
1.593
both
T
BRU
11
B
O3'
BRU
11
1_555
T
DC
12
B
P
DC
12
1_555
metalc
2.464
P
HOH
519
J
O
HOH
1_555
A
MG
1405
H
MG
MG
1_555
metalc
2.264
P
HOH
674
J
O
HOH
1_555
A
MG
1405
H
MG
MG
1_555
metalc
2.261
A
ASP
7
C
OD1
ASP
7
1_555
A
CA
1402
E
CA
CA
1_555
metalc
2.610
A
ASP
7
C
OD2
ASP
7
1_555
A
MG
1403
F
MG
MG
1_555
metalc
2.403
A
PHE
8
C
O
PHE
8
1_555
A
CA
1402
E
CA
CA
1_555
metalc
2.250
A
ASP
105
C
OD2
ASP
105
1_555
A
CA
1402
E
CA
CA
1_555
metalc
1.947
A
GLU
106
C
OE2
GLU
106
1_555
A
MG
1403
F
MG
MG
1_555
metalc
2.290
A
ALA
181
C
O
ALA
181
1_555
A
MG
1405
H
MG
MG
1_555
metalc
2.402
A
ILE
186
C
O
ILE
186
1_555
A
MG
1405
H
MG
MG
1_555
metalc
2.288
A
DG3
401
I
O2G
DG3
1_555
A
CA
1402
E
CA
CA
1_555
metalc
2.488
A
DG3
401
I
O2B
DG3
1_555
A
CA
1402
E
CA
CA
1_555
metalc
2.853
A
DG3
401
I
O2A
DG3
1_555
A
MG
1403
F
MG
MG
1_555
metalc
2.212
A
DG3
401
I
O2B
DG3
1_555
A
MG
1403
F
MG
MG
1_555
metalc
1.900
A
DG3
401
I
O1G
DG3
1_555
A
MG
1404
G
MG
MG
1_555
metalc
2.440
A
DG3
401
I
O1B
DG3
1_555
A
MG
1404
G
MG
MG
1_555
metalc
1.783
A
HOH
600
L
O
HOH
1_555
A
MG
1405
H
MG
MG
1_555
metalc
2.364
A
HOH
671
L
O
HOH
1_555
A
CA
1402
E
CA
CA
1_555
metalc
2.024
A
HOH
671
L
O
HOH
1_555
A
MG
1404
G
MG
MG
1_555
metalc
2.715
A
HOH
683
L
O
HOH
1_555
A
MG
1404
G
MG
MG
1_555
metalc
2.113
A
HOH
685
L
O
HOH
1_555
A
MG
1405
H
MG
MG
1_555
metalc
2.005
A
HOH
688
L
O
HOH
1_555
A
MG
1405
H
MG
MG
1_555
hydrog
WATSON-CRICK
P
DG
1
A
N1
DG
1
1_555
T
DC
16
B
N3
DC
16
1_555
hydrog
WATSON-CRICK
P
DG
1
A
N2
DG
1
1_555
T
DC
16
B
O2
DC
16
1_555
hydrog
WATSON-CRICK
P
DG
1
A
O6
DG
1
1_555
T
DC
16
B
N4
DC
16
1_555
hydrog
WATSON-CRICK
P
DG
2
A
N1
DG
2
1_555
T
DC
15
B
N3
DC
15
1_555
hydrog
WATSON-CRICK
P
DG
2
A
N2
DG
2
1_555
T
DC
15
B
O2
DC
15
1_555
hydrog
WATSON-CRICK
P
DG
2
A
O6
DG
2
1_555
T
DC
15
B
N4
DC
15
1_555
hydrog
WATSON-CRICK
P
DG
3
A
N1
DG
3
1_555
T
DC
14
B
N3
DC
14
1_555
hydrog
WATSON-CRICK
P
DG
3
A
N2
DG
3
1_555
T
DC
14
B
O2
DC
14
1_555
hydrog
WATSON-CRICK
P
DG
3
A
O6
DG
3
1_555
T
DC
14
B
N4
DC
14
1_555
hydrog
WATSON-CRICK
P
DG
4
A
N1
DG
4
1_555
T
DC
13
B
N3
DC
13
1_555
hydrog
WATSON-CRICK
P
DG
4
A
N2
DG
4
1_555
T
DC
13
B
O2
DC
13
1_555
hydrog
WATSON-CRICK
P
DG
4
A
O6
DG
4
1_555
T
DC
13
B
N4
DC
13
1_555
hydrog
WATSON-CRICK
P
DG
5
A
N1
DG
5
1_555
T
DC
12
B
N3
DC
12
1_555
hydrog
WATSON-CRICK
P
DG
5
A
N2
DG
5
1_555
T
DC
12
B
O2
DC
12
1_555
hydrog
WATSON-CRICK
P
DG
5
A
O6
DG
5
1_555
T
DC
12
B
N4
DC
12
1_555
hydrog
WATSON-CRICK
P
DA
6
A
N1
DA
6
1_555
T
BRU
11
B
N3
BRU
11
1_555
hydrog
WATSON-CRICK
P
DA
6
A
N6
DA
6
1_555
T
BRU
11
B
O4
BRU
11
1_555
hydrog
WATSON-CRICK
P
DA
7
A
N1
DA
7
1_555
T
DT
10
B
N3
DT
10
1_555
hydrog
WATSON-CRICK
P
DA
7
A
N6
DA
7
1_555
T
DT
10
B
O4
DT
10
1_555
hydrog
WATSON-CRICK
P
DG
8
A
N1
DG
8
1_555
T
DC
9
B
N3
DC
9
1_555
hydrog
WATSON-CRICK
P
DG
8
A
N2
DG
8
1_555
T
DC
9
B
O2
DC
9
1_555
hydrog
WATSON-CRICK
P
DG
8
A
O6
DG
8
1_555
T
DC
9
B
N4
DC
9
1_555
hydrog
WATSON-CRICK
P
DG
9
A
N1
DG
9
1_555
T
DC
8
B
N3
DC
8
1_555
hydrog
WATSON-CRICK
P
DG
9
A
N2
DG
9
1_555
T
DC
8
B
O2
DC
8
1_555
hydrog
WATSON-CRICK
P
DG
9
A
O6
DG
9
1_555
T
DC
8
B
N4
DC
8
1_555
hydrog
WATSON-CRICK
P
DA
10
A
N1
DA
10
1_555
T
BRU
7
B
N3
BRU
7
1_555
hydrog
WATSON-CRICK
P
DA
10
A
N6
DA
10
1_555
T
BRU
7
B
O4
BRU
7
1_555
hydrog
WATSON-CRICK
P
DT
11
A
N3
DT
11
1_555
T
DA
6
B
N1
DA
6
1_555
hydrog
WATSON-CRICK
P
DT
11
A
O4
DT
11
1_555
T
DA
6
B
N6
DA
6
1_555
hydrog
WATSON-CRICK
P
DT
12
A
N3
DT
12
1_555
T
DA
5
B
N1
DA
5
1_555
hydrog
WATSON-CRICK
P
DT
12
A
O4
DT
12
1_555
T
DA
5
B
N6
DA
5
1_555
TRANSFERASE/DNA
DNA polymerase, protein-DNA complex, Y-family, TRANSFERASE-DNA COMPLEX
A
LYS
159
C
LYS
159
1
A
PRO
160
C
PRO
160
-3.37
DPO42_SULSO
UNP
3
1
Q97W02
1JXL
PDB
1
1JXL
1JXL
PDB
2
1JXL
1
352
1JXL
1
352
Q97W02
A
1
1
352
1
12
1JXL
1
12
1JXL
P
2
1
12
1
16
1JXL
1
16
1JXL
T
3
1
16
5
3
4
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
A
ILE
99
C
ILE
99
A
SER
103
C
SER
103
A
GLU
106
C
GLU
106
A
ASP
110
C
ASP
110
A
VAL
3
C
VAL
3
A
PHE
8
C
PHE
8
A
VAL
140
C
VAL
140
A
SER
145
C
SER
145
A
ILE
163
C
ILE
163
A
VAL
165
C
VAL
165
A
GLY
41
C
GLY
41
A
ALA
46
C
ALA
46
A
VAL
28
C
VAL
28
A
PHE
33
C
PHE
33
A
VAL
72
C
VAL
72
A
PRO
75
C
PRO
75
A
SER
244
C
SER
244
A
SER
255
C
SER
255
A
ILE
330
C
ILE
330
A
PHE
340
C
PHE
340
A
PRO
281
C
PRO
281
A
THR
290
C
THR
290
A
ILE
295
C
ILE
295
A
THR
301
C
THR
301
BINDING SITE FOR RESIDUE CA A 1402
A
CA
1402
Software
6
BINDING SITE FOR RESIDUE MG A 1403
A
MG
1403
Software
5
BINDING SITE FOR RESIDUE MG A 1404
A
MG
1404
Software
5
BINDING SITE FOR RESIDUE MG A 1405
A
MG
1405
Software
7
BINDING SITE FOR RESIDUE EDO T 1204
T
EDO
1204
Software
6
BINDING SITE FOR RESIDUE DG3 A 401
A
DG3
401
Software
27
A
ASP
7
C
ASP
7
6
1_555
A
PHE
8
C
PHE
8
6
1_555
A
ASP
105
C
ASP
105
6
1_555
A
DG3
401
I
DG3
6
1_555
A
HOH
671
L
HOH
6
1_555
A
MG
1403
F
MG
6
1_555
A
ASP
7
C
ASP
7
5
1_555
A
ASP
105
C
ASP
105
5
1_555
A
GLU
106
C
GLU
106
5
1_555
A
DG3
401
I
DG3
5
1_555
A
CA
1402
E
CA
5
1_555
A
TYR
10
C
TYR
10
5
1_555
A
ARG
51
C
ARG
51
5
1_555
A
DG3
401
I
DG3
5
1_555
A
HOH
671
L
HOH
5
1_555
A
HOH
683
L
HOH
5
1_555
A
ALA
181
C
ALA
181
7
1_555
A
ILE
186
C
ILE
186
7
1_555
A
HOH
600
L
HOH
7
1_555
A
HOH
685
L
HOH
7
1_555
A
HOH
688
L
HOH
7
1_555
P
HOH
519
J
HOH
7
1_555
P
HOH
674
J
HOH
7
1_555
A
DG3
401
I
DG3
6
1_555
P
DT
12
A
DT
12
6
1_555
T
DG
4
B
DG
4
6
1_555
T
DA
5
B
DA
5
6
1_555
T
HOH
542
K
HOH
6
1_555
T
HOH
679
K
HOH
6
1_555
A
ASP
7
C
ASP
7
27
1_555
A
PHE
8
C
PHE
8
27
1_555
A
TYR
10
C
TYR
10
27
1_555
A
PHE
11
C
PHE
11
27
1_555
A
ALA
44
C
ALA
44
27
1_555
A
THR
45
C
THR
45
27
1_555
A
ARG
51
C
ARG
51
27
1_555
A
ALA
57
C
ALA
57
27
1_555
A
GLY
58
C
GLY
58
27
1_555
A
ASP
105
C
ASP
105
27
1_555
A
GLU
106
C
GLU
106
27
1_555
A
LYS
159
C
LYS
159
27
1_555
A
HOH
541
L
HOH
27
1_555
A
HOH
653
L
HOH
27
1_555
A
HOH
670
L
HOH
27
1_555
A
HOH
671
L
HOH
27
1_555
A
HOH
683
L
HOH
27
1_555
A
HOH
728
L
HOH
27
1_555
A
HOH
737
L
HOH
27
1_555
A
HOH
755
L
HOH
27
1_555
A
CA
1402
E
CA
27
1_555
A
MG
1403
F
MG
27
1_555
A
MG
1404
G
MG
27
1_555
P
DT
12
A
DT
12
27
1_555
T
DC
3
B
DC
3
27
1_555
T
DG
4
B
DG
4
27
1_555
T
EDO
1204
D
EDO
27
1_555
18
P 21 21 2