0.005364
0.000000
0.000000
0.000000
0.019220
0.000000
0.000000
0.000000
0.017758
0.00000
0.00000
0.00000
Davies, D.R.
Interthal, H.
Champoux, J.J.
Hol, W.G.J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
186.445
52.030
56.313
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
Structure
STRUE6
2005
0969-2126
10
237
248
10.1016/S0969-2126(02)00707-4
11839309
The crystal structure of human tyrosyl-DNA phosphodiesterase, Tdp1.
2002
10.2210/pdb1jy1/pdb
pdb_00001jy1
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
113
1
CCD
2001-05-04
ADSC QUANTUM 4
double crystal
MAD
M
x-ray
1
0.9792
1.0
0.9794
1.0
0.9640
1.0
5.0.2
ALS
0.9792,0.9794,0.9640
SYNCHROTRON
ALS BEAMLINE 5.0.2
52897.582
TYROSYL-DNA PHOSPHODIESTERASE
Residues 149-608
1
man
polymer
18.015
water
345
nat
water
TDP1
no
yes
LEDPGEGQDIWD(MSE)LDKGNPFQFYLTRVSGVKPKYNSGALHIKDILSPLFGTLVSSAQFNYCFDVDWLVKQYPPEFR
KKPILLVHGDKREAKAHLHAQAKPYENISLCQAKLDIAFGTHHTK(MSE)(MSE)LLLYEEGLRVVIHTSNLIHADWHQK
TQGIWLSPLYPRIADGTHKSGESPTHFKANLISYLTAYNAPSLKEWIDVIHKHDLSETNVYLIGSTPGRFQGSQKDNWGH
FRLKKLLKDHASS(MSE)PNAESWPVVGQFSSVGSLGADESKWLCSEFKES(MSE)LTLGKESKTPGKSSVPLYLIYPSV
ENVRTSLEGYPAGGSLPYSIQTAEKQNWLHSYFHKWSAETSGRSNA(MSE)PHIKTY(MSE)RPSPDFSKIAWFLVTSAN
LSKAAWGALEKNGTQL(MSE)IRSYELGVLFLPSALGLDSFKVKQKFFAGSQEP(MSE)ATFPVPYDLPPELYGSKDRPW
IWNIPYVKAPDTHGN(MSE)WVPS
LEDPGEGQDIWDMLDKGNPFQFYLTRVSGVKPKYNSGALHIKDILSPLFGTLVSSAQFNYCFDVDWLVKQYPPEFRKKPI
LLVHGDKREAKAHLHAQAKPYENISLCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIHADWHQKTQGIWLSPLYPR
IADGTHKSGESPTHFKANLISYLTAYNAPSLKEWIDVIHKHDLSETNVYLIGSTPGRFQGSQKDNWGHFRLKKLLKDHAS
SMPNAESWPVVGQFSSVGSLGADESKWLCSEFKESMLTLGKESKTPGKSSVPLYLIYPSVENVRTSLEGYPAGGSLPYSI
QTAEKQNWLHSYFHKWSAETSGRSNAMPHIKTYMRPSPDFSKIAWFLVTSANLSKAAWGALEKNGTQLMIRSYELGVLFL
PSALGLDSFKVKQKFFAGSQEPMATFPVPYDLPPELYGSKDRPWIWNIPYVKAPDTHGNMWVPS
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
Escherichia coli
sample
9606
Homo sapiens
511693
Escherichia coli BL21
BL21
Plasmid
pET15b
1
2.58
52.33
VAPOR DIFFUSION, SITTING DROP
9.6
PEG 8000, sodium chloride, CHES, spermine, pH 9.6, VAPOR DIFFUSION, SITTING DROP, temperature 298K
298
database_2
struct_conn
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
1
0
2002-02-20
1
1
2008-04-27
1
2
2011-07-13
1
3
2021-10-27
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_leaving_atom_flag
_struct_ref_seq_dif.details
RCSB
Y
RCSB
2001-09-10
REL
REL
HOH
water
HOH
609
2
HOH
HOH
609
A
HOH
611
2
HOH
HOH
611
A
HOH
612
2
HOH
HOH
612
A
HOH
613
2
HOH
HOH
613
A
HOH
614
2
HOH
HOH
614
A
HOH
615
2
HOH
HOH
615
A
HOH
616
2
HOH
HOH
616
A
HOH
617
2
HOH
HOH
617
A
HOH
618
2
HOH
HOH
618
A
HOH
619
2
HOH
HOH
619
A
HOH
620
2
HOH
HOH
620
A
HOH
622
2
HOH
HOH
622
A
HOH
623
2
HOH
HOH
623
A
HOH
624
2
HOH
HOH
624
A
HOH
625
2
HOH
HOH
625
A
HOH
626
2
HOH
HOH
626
A
HOH
627
2
HOH
HOH
627
A
HOH
628
2
HOH
HOH
628
A
HOH
629
2
HOH
HOH
629
A
HOH
630
2
HOH
HOH
630
A
HOH
631
2
HOH
HOH
631
A
HOH
632
2
HOH
HOH
632
A
HOH
633
2
HOH
HOH
633
A
HOH
634
2
HOH
HOH
634
A
HOH
635
2
HOH
HOH
635
A
HOH
636
2
HOH
HOH
636
A
HOH
637
2
HOH
HOH
637
A
HOH
638
2
HOH
HOH
638
A
HOH
639
2
HOH
HOH
639
A
HOH
640
2
HOH
HOH
640
A
HOH
641
2
HOH
HOH
641
A
HOH
642
2
HOH
HOH
642
A
HOH
643
2
HOH
HOH
643
A
HOH
644
2
HOH
HOH
644
A
HOH
645
2
HOH
HOH
645
A
HOH
646
2
HOH
HOH
646
A
HOH
648
2
HOH
HOH
648
A
HOH
649
2
HOH
HOH
649
A
HOH
650
2
HOH
HOH
650
A
HOH
651
2
HOH
HOH
651
A
HOH
652
2
HOH
HOH
652
A
HOH
653
2
HOH
HOH
653
A
HOH
654
2
HOH
HOH
654
A
HOH
655
2
HOH
HOH
655
A
HOH
656
2
HOH
HOH
656
A
HOH
657
2
HOH
HOH
657
A
HOH
658
2
HOH
HOH
658
A
HOH
659
2
HOH
HOH
659
A
HOH
660
2
HOH
HOH
660
A
HOH
661
2
HOH
HOH
661
A
HOH
662
2
HOH
HOH
662
A
HOH
663
2
HOH
HOH
663
A
HOH
664
2
HOH
HOH
664
A
HOH
665
2
HOH
HOH
665
A
HOH
666
2
HOH
HOH
666
A
HOH
667
2
HOH
HOH
667
A
HOH
668
2
HOH
HOH
668
A
HOH
669
2
HOH
HOH
669
A
HOH
670
2
HOH
HOH
670
A
HOH
671
2
HOH
HOH
671
A
HOH
672
2
HOH
HOH
672
A
HOH
673
2
HOH
HOH
673
A
HOH
674
2
HOH
HOH
674
A
HOH
675
2
HOH
HOH
675
A
HOH
676
2
HOH
HOH
676
A
HOH
677
2
HOH
HOH
677
A
HOH
678
2
HOH
HOH
678
A
HOH
679
2
HOH
HOH
679
A
HOH
680
2
HOH
HOH
680
A
HOH
681
2
HOH
HOH
681
A
HOH
682
2
HOH
HOH
682
A
HOH
683
2
HOH
HOH
683
A
HOH
684
2
HOH
HOH
684
A
HOH
685
2
HOH
HOH
685
A
HOH
687
2
HOH
HOH
687
A
HOH
688
2
HOH
HOH
688
A
HOH
689
2
HOH
HOH
689
A
HOH
690
2
HOH
HOH
690
A
HOH
691
2
HOH
HOH
691
A
HOH
693
2
HOH
HOH
693
A
HOH
694
2
HOH
HOH
694
A
HOH
696
2
HOH
HOH
696
A
HOH
697
2
HOH
HOH
697
A
HOH
698
2
HOH
HOH
698
A
HOH
700
2
HOH
HOH
700
A
HOH
701
2
HOH
HOH
701
A
HOH
702
2
HOH
HOH
702
A
HOH
703
2
HOH
HOH
703
A
HOH
704
2
HOH
HOH
704
A
HOH
705
2
HOH
HOH
705
A
HOH
706
2
HOH
HOH
706
A
HOH
707
2
HOH
HOH
707
A
HOH
710
2
HOH
HOH
710
A
HOH
711
2
HOH
HOH
711
A
HOH
712
2
HOH
HOH
712
A
HOH
713
2
HOH
HOH
713
A
HOH
714
2
HOH
HOH
714
A
HOH
716
2
HOH
HOH
716
A
HOH
717
2
HOH
HOH
717
A
HOH
718
2
HOH
HOH
718
A
HOH
719
2
HOH
HOH
719
A
HOH
720
2
HOH
HOH
720
A
HOH
721
2
HOH
HOH
721
A
HOH
722
2
HOH
HOH
722
A
HOH
723
2
HOH
HOH
723
A
HOH
724
2
HOH
HOH
724
A
HOH
725
2
HOH
HOH
725
A
HOH
727
2
HOH
HOH
727
A
HOH
728
2
HOH
HOH
728
A
HOH
729
2
HOH
HOH
729
A
HOH
733
2
HOH
HOH
733
A
HOH
734
2
HOH
HOH
734
A
HOH
736
2
HOH
HOH
736
A
HOH
737
2
HOH
HOH
737
A
HOH
739
2
HOH
HOH
739
A
HOH
740
2
HOH
HOH
740
A
HOH
741
2
HOH
HOH
741
A
HOH
743
2
HOH
HOH
743
A
HOH
745
2
HOH
HOH
745
A
HOH
746
2
HOH
HOH
746
A
HOH
748
2
HOH
HOH
748
A
HOH
749
2
HOH
HOH
749
A
HOH
750
2
HOH
HOH
750
A
HOH
752
2
HOH
HOH
752
A
HOH
753
2
HOH
HOH
753
A
HOH
754
2
HOH
HOH
754
A
HOH
757
2
HOH
HOH
757
A
HOH
758
2
HOH
HOH
758
A
HOH
759
2
HOH
HOH
759
A
HOH
760
2
HOH
HOH
760
A
HOH
761
2
HOH
HOH
761
A
HOH
762
2
HOH
HOH
762
A
HOH
765
2
HOH
HOH
765
A
HOH
766
2
HOH
HOH
766
A
HOH
767
2
HOH
HOH
767
A
HOH
768
2
HOH
HOH
768
A
HOH
769
2
HOH
HOH
769
A
HOH
770
2
HOH
HOH
770
A
HOH
771
2
HOH
HOH
771
A
HOH
772
2
HOH
HOH
772
A
HOH
773
2
HOH
HOH
773
A
HOH
774
2
HOH
HOH
774
A
HOH
776
2
HOH
HOH
776
A
HOH
777
2
HOH
HOH
777
A
HOH
778
2
HOH
HOH
778
A
HOH
779
2
HOH
HOH
779
A
HOH
780
2
HOH
HOH
780
A
HOH
781
2
HOH
HOH
781
A
HOH
782
2
HOH
HOH
782
A
HOH
783
2
HOH
HOH
783
A
HOH
786
2
HOH
HOH
786
A
HOH
788
2
HOH
HOH
788
A
HOH
789
2
HOH
HOH
789
A
HOH
791
2
HOH
HOH
791
A
HOH
792
2
HOH
HOH
792
A
HOH
793
2
HOH
HOH
793
A
HOH
794
2
HOH
HOH
794
A
HOH
795
2
HOH
HOH
795
A
HOH
796
2
HOH
HOH
796
A
HOH
799
2
HOH
HOH
799
A
HOH
800
2
HOH
HOH
800
A
HOH
801
2
HOH
HOH
801
A
HOH
803
2
HOH
HOH
803
A
HOH
804
2
HOH
HOH
804
A
HOH
805
2
HOH
HOH
805
A
HOH
806
2
HOH
HOH
806
A
HOH
808
2
HOH
HOH
808
A
HOH
811
2
HOH
HOH
811
A
HOH
812
2
HOH
HOH
812
A
HOH
813
2
HOH
HOH
813
A
HOH
814
2
HOH
HOH
814
A
HOH
816
2
HOH
HOH
816
A
HOH
817
2
HOH
HOH
817
A
HOH
818
2
HOH
HOH
818
A
HOH
819
2
HOH
HOH
819
A
HOH
820
2
HOH
HOH
820
A
HOH
822
2
HOH
HOH
822
A
HOH
823
2
HOH
HOH
823
A
HOH
824
2
HOH
HOH
824
A
HOH
825
2
HOH
HOH
825
A
HOH
826
2
HOH
HOH
826
A
HOH
827
2
HOH
HOH
827
A
HOH
828
2
HOH
HOH
828
A
HOH
829
2
HOH
HOH
829
A
HOH
830
2
HOH
HOH
830
A
HOH
831
2
HOH
HOH
831
A
HOH
832
2
HOH
HOH
832
A
HOH
833
2
HOH
HOH
833
A
HOH
834
2
HOH
HOH
834
A
HOH
835
2
HOH
HOH
835
A
HOH
836
2
HOH
HOH
836
A
HOH
837
2
HOH
HOH
837
A
HOH
838
2
HOH
HOH
838
A
HOH
839
2
HOH
HOH
839
A
HOH
840
2
HOH
HOH
840
A
HOH
841
2
HOH
HOH
841
A
HOH
842
2
HOH
HOH
842
A
HOH
843
2
HOH
HOH
843
A
HOH
844
2
HOH
HOH
844
A
HOH
845
2
HOH
HOH
845
A
HOH
846
2
HOH
HOH
846
A
HOH
848
2
HOH
HOH
848
A
HOH
850
2
HOH
HOH
850
A
HOH
851
2
HOH
HOH
851
A
HOH
852
2
HOH
HOH
852
A
HOH
854
2
HOH
HOH
854
A
HOH
856
2
HOH
HOH
856
A
HOH
859
2
HOH
HOH
859
A
HOH
860
2
HOH
HOH
860
A
HOH
861
2
HOH
HOH
861
A
HOH
862
2
HOH
HOH
862
A
HOH
865
2
HOH
HOH
865
A
HOH
866
2
HOH
HOH
866
A
HOH
867
2
HOH
HOH
867
A
HOH
870
2
HOH
HOH
870
A
HOH
871
2
HOH
HOH
871
A
HOH
873
2
HOH
HOH
873
A
HOH
874
2
HOH
HOH
874
A
HOH
875
2
HOH
HOH
875
A
HOH
876
2
HOH
HOH
876
A
HOH
878
2
HOH
HOH
878
A
HOH
880
2
HOH
HOH
880
A
HOH
882
2
HOH
HOH
882
A
HOH
884
2
HOH
HOH
884
A
HOH
887
2
HOH
HOH
887
A
HOH
888
2
HOH
HOH
888
A
HOH
891
2
HOH
HOH
891
A
HOH
893
2
HOH
HOH
893
A
HOH
895
2
HOH
HOH
895
A
HOH
896
2
HOH
HOH
896
A
HOH
899
2
HOH
HOH
899
A
HOH
900
2
HOH
HOH
900
A
HOH
902
2
HOH
HOH
902
A
HOH
905
2
HOH
HOH
905
A
HOH
908
2
HOH
HOH
908
A
HOH
909
2
HOH
HOH
909
A
HOH
910
2
HOH
HOH
910
A
HOH
911
2
HOH
HOH
911
A
HOH
912
2
HOH
HOH
912
A
HOH
913
2
HOH
HOH
913
A
HOH
917
2
HOH
HOH
917
A
HOH
918
2
HOH
HOH
918
A
HOH
919
2
HOH
HOH
919
A
HOH
921
2
HOH
HOH
921
A
HOH
923
2
HOH
HOH
923
A
HOH
925
2
HOH
HOH
925
A
HOH
927
2
HOH
HOH
927
A
HOH
928
2
HOH
HOH
928
A
HOH
929
2
HOH
HOH
929
A
HOH
930
2
HOH
HOH
930
A
HOH
933
2
HOH
HOH
933
A
HOH
936
2
HOH
HOH
936
A
HOH
940
2
HOH
HOH
940
A
HOH
941
2
HOH
HOH
941
A
HOH
943
2
HOH
HOH
943
A
HOH
945
2
HOH
HOH
945
A
HOH
948
2
HOH
HOH
948
A
HOH
949
2
HOH
HOH
949
A
HOH
952
2
HOH
HOH
952
A
HOH
955
2
HOH
HOH
955
A
HOH
958
2
HOH
HOH
958
A
HOH
960
2
HOH
HOH
960
A
HOH
962
2
HOH
HOH
962
A
HOH
965
2
HOH
HOH
965
A
HOH
985
2
HOH
HOH
985
A
HOH
991
2
HOH
HOH
991
A
HOH
992
2
HOH
HOH
992
A
HOH
994
2
HOH
HOH
994
A
HOH
995
2
HOH
HOH
995
A
HOH
997
2
HOH
HOH
997
A
HOH
998
2
HOH
HOH
998
A
HOH
999
2
HOH
HOH
999
A
HOH
1000
2
HOH
HOH
1000
A
HOH
1001
2
HOH
HOH
1001
A
HOH
1002
2
HOH
HOH
1002
A
HOH
1003
2
HOH
HOH
1003
A
HOH
1004
2
HOH
HOH
1004
A
HOH
1005
2
HOH
HOH
1005
A
HOH
1006
2
HOH
HOH
1006
A
HOH
1007
2
HOH
HOH
1007
A
HOH
1010
2
HOH
HOH
1010
A
HOH
1011
2
HOH
HOH
1011
A
HOH
1012
2
HOH
HOH
1012
A
HOH
1015
2
HOH
HOH
1015
A
HOH
1019
2
HOH
HOH
1019
A
HOH
1020
2
HOH
HOH
1020
A
HOH
1021
2
HOH
HOH
1021
A
HOH
1022
2
HOH
HOH
1022
A
HOH
1023
2
HOH
HOH
1023
A
HOH
1024
2
HOH
HOH
1024
A
HOH
1026
2
HOH
HOH
1026
A
HOH
1027
2
HOH
HOH
1027
A
HOH
1031
2
HOH
HOH
1031
A
HOH
1032
2
HOH
HOH
1032
A
HOH
1033
2
HOH
HOH
1033
A
HOH
1034
2
HOH
HOH
1034
A
HOH
1036
2
HOH
HOH
1036
A
HOH
1037
2
HOH
HOH
1037
A
HOH
1038
2
HOH
HOH
1038
A
HOH
1039
2
HOH
HOH
1039
A
HOH
1042
2
HOH
HOH
1042
A
HOH
1043
2
HOH
HOH
1043
A
HOH
1044
2
HOH
HOH
1044
A
HOH
1045
2
HOH
HOH
1045
A
HOH
1047
2
HOH
HOH
1047
A
HOH
1052
2
HOH
HOH
1052
A
HOH
1053
2
HOH
HOH
1053
A
HOH
1056
2
HOH
HOH
1056
A
HOH
1057
2
HOH
HOH
1057
A
HOH
1060
2
HOH
HOH
1060
A
HOH
1061
2
HOH
HOH
1061
A
HOH
1063
2
HOH
HOH
1063
A
HOH
1064
2
HOH
HOH
1064
A
HOH
1065
2
HOH
HOH
1065
A
HOH
1068
2
HOH
HOH
1068
A
HOH
1069
2
HOH
HOH
1069
A
HOH
1073
2
HOH
HOH
1073
A
HOH
1075
2
HOH
HOH
1075
A
HOH
1077
2
HOH
HOH
1077
A
HOH
1080
2
HOH
HOH
1080
A
HOH
1083
2
HOH
HOH
1083
A
HOH
1090
2
HOH
HOH
1090
A
HOH
1092
2
HOH
HOH
1092
A
HOH
1093
2
HOH
HOH
1093
A
HOH
1094
2
HOH
HOH
1094
A
HOH
1096
2
HOH
HOH
1096
A
HOH
1098
2
HOH
HOH
1098
A
HOH
1101
2
HOH
HOH
1101
A
HOH
1105
2
HOH
HOH
1105
A
HOH
1107
2
HOH
HOH
1107
A
HOH
1113
2
HOH
HOH
1113
A
HOH
1115
2
HOH
HOH
1115
A
HOH
1117
2
HOH
HOH
1117
A
HOH
1120
2
HOH
HOH
1120
A
HOH
1121
2
HOH
HOH
1121
A
HOH
1123
2
HOH
HOH
1123
A
HOH
1124
2
HOH
HOH
1124
A
HOH
1125
2
HOH
HOH
1125
A
HOH
1126
2
HOH
HOH
1126
A
HOH
1127
2
HOH
HOH
1127
A
HOH
1129
2
HOH
HOH
1129
A
HOH
1131
2
HOH
HOH
1131
A
HOH
1132
2
HOH
HOH
1132
A
HOH
1139
2
HOH
HOH
1139
A
HOH
1140
2
HOH
HOH
1140
A
LEU
145
n
1
LEU
145
A
GLU
146
n
2
GLU
146
A
ASP
147
n
3
ASP
147
A
PRO
148
n
4
PRO
148
A
GLY
149
n
5
GLY
149
A
GLU
150
n
6
GLU
150
A
GLY
151
n
7
GLY
151
A
GLN
152
n
8
GLN
152
A
ASP
153
n
9
ASP
153
A
ILE
154
n
10
ILE
154
A
TRP
155
n
11
TRP
155
A
ASP
156
n
12
ASP
156
A
MSE
157
n
13
MSE
157
A
LEU
158
n
14
LEU
158
A
ASP
159
n
15
ASP
159
A
LYS
160
n
16
LYS
160
A
GLY
161
n
17
GLY
161
A
ASN
162
n
18
ASN
162
A
PRO
163
n
19
PRO
163
A
PHE
164
n
20
PHE
164
A
GLN
165
n
21
GLN
165
A
PHE
166
n
22
PHE
166
A
TYR
167
n
23
TYR
167
A
LEU
168
n
24
LEU
168
A
THR
169
n
25
THR
169
A
ARG
170
n
26
ARG
170
A
VAL
171
n
27
VAL
171
A
SER
172
n
28
SER
172
A
GLY
173
n
29
GLY
173
A
VAL
174
n
30
VAL
174
A
LYS
175
n
31
LYS
175
A
PRO
176
n
32
PRO
176
A
LYS
177
n
33
LYS
177
A
TYR
178
n
34
TYR
178
A
ASN
179
n
35
ASN
179
A
SER
180
n
36
SER
180
A
GLY
181
n
37
GLY
181
A
ALA
182
n
38
ALA
182
A
LEU
183
n
39
LEU
183
A
HIS
184
n
40
HIS
184
A
ILE
185
n
41
ILE
185
A
LYS
186
n
42
LYS
186
A
ASP
187
n
43
ASP
187
A
ILE
188
n
44
ILE
188
A
LEU
189
n
45
LEU
189
A
SER
190
n
46
SER
190
A
PRO
191
n
47
PRO
191
A
LEU
192
n
48
LEU
192
A
PHE
193
n
49
PHE
193
A
GLY
194
n
50
GLY
194
A
THR
195
n
51
THR
195
A
LEU
196
n
52
LEU
196
A
VAL
197
n
53
VAL
197
A
SER
198
n
54
SER
198
A
SER
199
n
55
SER
199
A
ALA
200
n
56
ALA
200
A
GLN
201
n
57
GLN
201
A
PHE
202
n
58
PHE
202
A
ASN
203
n
59
ASN
203
A
TYR
204
n
60
TYR
204
A
CYS
205
n
61
CYS
205
A
PHE
206
n
62
PHE
206
A
ASP
207
n
63
ASP
207
A
VAL
208
n
64
VAL
208
A
ASP
209
n
65
ASP
209
A
TRP
210
n
66
TRP
210
A
LEU
211
n
67
LEU
211
A
VAL
212
n
68
VAL
212
A
LYS
213
n
69
LYS
213
A
GLN
214
n
70
GLN
214
A
TYR
215
n
71
TYR
215
A
PRO
216
n
72
PRO
216
A
PRO
217
n
73
PRO
217
A
GLU
218
n
74
GLU
218
A
PHE
219
n
75
PHE
219
A
ARG
220
n
76
ARG
220
A
LYS
221
n
77
LYS
221
A
LYS
222
n
78
LYS
222
A
PRO
223
n
79
PRO
223
A
ILE
224
n
80
ILE
224
A
LEU
225
n
81
LEU
225
A
LEU
226
n
82
LEU
226
A
VAL
227
n
83
VAL
227
A
HIS
228
n
84
HIS
228
A
GLY
229
n
85
GLY
229
A
ASP
230
n
86
ASP
230
A
LYS
231
n
87
LYS
231
A
ARG
232
n
88
ARG
232
A
GLU
233
n
89
GLU
233
A
ALA
234
n
90
ALA
234
A
LYS
235
n
91
LYS
235
A
ALA
236
n
92
ALA
236
A
HIS
237
n
93
HIS
237
A
LEU
238
n
94
LEU
238
A
HIS
239
n
95
HIS
239
A
ALA
240
n
96
ALA
240
A
GLN
241
n
97
GLN
241
A
ALA
242
n
98
ALA
242
A
LYS
243
n
99
LYS
243
A
PRO
244
n
100
PRO
244
A
TYR
245
n
101
TYR
245
A
GLU
246
n
102
GLU
246
A
ASN
247
n
103
ASN
247
A
ILE
248
n
104
ILE
248
A
SER
249
n
105
SER
249
A
LEU
250
n
106
LEU
250
A
CYS
251
n
107
CYS
251
A
GLN
252
n
108
GLN
252
A
ALA
253
n
109
ALA
253
A
LYS
254
n
110
LYS
254
A
LEU
255
n
111
LEU
255
A
ASP
256
n
112
ASP
256
A
ILE
257
n
113
ILE
257
A
ALA
258
n
114
ALA
258
A
PHE
259
n
115
PHE
259
A
GLY
260
n
116
GLY
260
A
THR
261
n
117
THR
261
A
HIS
262
n
118
HIS
262
A
HIS
263
n
119
HIS
263
A
THR
264
n
120
THR
264
A
LYS
265
n
121
LYS
265
A
MSE
266
n
122
MSE
266
A
MSE
267
n
123
MSE
267
A
LEU
268
n
124
LEU
268
A
LEU
269
n
125
LEU
269
A
LEU
270
n
126
LEU
270
A
TYR
271
n
127
TYR
271
A
GLU
272
n
128
GLU
272
A
GLU
273
n
129
GLU
273
A
GLY
274
n
130
GLY
274
A
LEU
275
n
131
LEU
275
A
ARG
276
n
132
ARG
276
A
VAL
277
n
133
VAL
277
A
VAL
278
n
134
VAL
278
A
ILE
279
n
135
ILE
279
A
HIS
280
n
136
HIS
280
A
THR
281
n
137
THR
281
A
SER
282
n
138
SER
282
A
ASN
283
n
139
ASN
283
A
LEU
284
n
140
LEU
284
A
ILE
285
n
141
ILE
285
A
HIS
286
n
142
HIS
286
A
ALA
287
n
143
ALA
287
A
ASP
288
n
144
ASP
288
A
TRP
289
n
145
TRP
289
A
HIS
290
n
146
HIS
290
A
GLN
291
n
147
GLN
291
A
LYS
292
n
148
LYS
292
A
THR
293
n
149
THR
293
A
GLN
294
n
150
GLN
294
A
GLY
295
n
151
GLY
295
A
ILE
296
n
152
ILE
296
A
TRP
297
n
153
TRP
297
A
LEU
298
n
154
LEU
298
A
SER
299
n
155
SER
299
A
PRO
300
n
156
PRO
300
A
LEU
301
n
157
LEU
301
A
TYR
302
n
158
TYR
302
A
PRO
303
n
159
PRO
303
A
ARG
304
n
160
ARG
304
A
ILE
305
n
161
ILE
305
A
ALA
306
n
162
ALA
306
A
ASP
307
n
163
ASP
307
A
GLY
308
n
164
GLY
308
A
THR
309
n
165
THR
309
A
HIS
310
n
166
HIS
310
A
LYS
311
n
167
LYS
311
A
SER
312
n
168
SER
312
A
GLY
313
n
169
GLY
313
A
GLU
314
n
170
GLU
314
A
SER
315
n
171
SER
315
A
PRO
316
n
172
PRO
316
A
THR
317
n
173
THR
317
A
HIS
318
n
174
HIS
318
A
PHE
319
n
175
PHE
319
A
LYS
320
n
176
LYS
320
A
ALA
321
n
177
ALA
321
A
ASN
322
n
178
ASN
322
A
LEU
323
n
179
LEU
323
A
ILE
324
n
180
ILE
324
A
SER
325
n
181
SER
325
A
TYR
326
n
182
TYR
326
A
LEU
327
n
183
LEU
327
A
THR
328
n
184
THR
328
A
ALA
329
n
185
ALA
329
A
TYR
330
n
186
TYR
330
A
ASN
331
n
187
ASN
331
A
ALA
332
n
188
ALA
332
A
PRO
333
n
189
PRO
333
A
SER
334
n
190
SER
334
A
LEU
335
n
191
LEU
335
A
LYS
336
n
192
LYS
336
A
GLU
337
n
193
GLU
337
A
TRP
338
n
194
TRP
338
A
ILE
339
n
195
ILE
339
A
ASP
340
n
196
ASP
340
A
VAL
341
n
197
VAL
341
A
ILE
342
n
198
ILE
342
A
HIS
343
n
199
HIS
343
A
LYS
344
n
200
LYS
344
A
HIS
345
n
201
HIS
345
A
ASP
346
n
202
ASP
346
A
LEU
347
n
203
LEU
347
A
SER
348
n
204
SER
348
A
GLU
349
n
205
GLU
349
A
THR
350
n
206
THR
350
A
ASN
351
n
207
ASN
351
A
VAL
352
n
208
VAL
352
A
TYR
353
n
209
TYR
353
A
LEU
354
n
210
LEU
354
A
ILE
355
n
211
ILE
355
A
GLY
356
n
212
GLY
356
A
SER
357
n
213
SER
357
A
THR
358
n
214
THR
358
A
PRO
359
n
215
PRO
359
A
GLY
360
n
216
GLY
360
A
ARG
361
n
217
ARG
361
A
PHE
362
n
218
PHE
362
A
GLN
363
n
219
GLN
363
A
GLY
364
n
220
GLY
364
A
SER
365
n
221
SER
365
A
GLN
366
n
222
GLN
366
A
LYS
367
n
223
LYS
367
A
ASP
368
n
224
ASP
368
A
ASN
369
n
225
ASN
369
A
TRP
370
n
226
TRP
370
A
GLY
371
n
227
GLY
371
A
HIS
372
n
228
HIS
372
A
PHE
373
n
229
PHE
373
A
ARG
374
n
230
ARG
374
A
LEU
375
n
231
LEU
375
A
LYS
376
n
232
LYS
376
A
LYS
377
n
233
LYS
377
A
LEU
378
n
234
LEU
378
A
LEU
379
n
235
LEU
379
A
LYS
380
n
236
LYS
380
A
ASP
381
n
237
ASP
381
A
HIS
382
n
238
HIS
382
A
ALA
383
n
239
ALA
383
A
n
240
384
A
n
241
385
A
n
242
386
A
n
243
387
A
n
244
388
A
ALA
389
n
245
ALA
389
A
GLU
390
n
246
GLU
390
A
SER
391
n
247
SER
391
A
TRP
392
n
248
TRP
392
A
PRO
393
n
249
PRO
393
A
VAL
394
n
250
VAL
394
A
VAL
395
n
251
VAL
395
A
GLY
396
n
252
GLY
396
A
GLN
397
n
253
GLN
397
A
PHE
398
n
254
PHE
398
A
SER
399
n
255
SER
399
A
SER
400
n
256
SER
400
A
VAL
401
n
257
VAL
401
A
GLY
402
n
258
GLY
402
A
SER
403
n
259
SER
403
A
LEU
404
n
260
LEU
404
A
GLY
405
n
261
GLY
405
A
ALA
406
n
262
ALA
406
A
ASP
407
n
263
ASP
407
A
GLU
408
n
264
GLU
408
A
SER
409
n
265
SER
409
A
LYS
410
n
266
LYS
410
A
TRP
411
n
267
TRP
411
A
LEU
412
n
268
LEU
412
A
CYS
413
n
269
CYS
413
A
SER
414
n
270
SER
414
A
GLU
415
n
271
GLU
415
A
PHE
416
n
272
PHE
416
A
LYS
417
n
273
LYS
417
A
GLU
418
n
274
GLU
418
A
SER
419
n
275
SER
419
A
MSE
420
n
276
MSE
420
A
LEU
421
n
277
LEU
421
A
THR
422
n
278
THR
422
A
LEU
423
n
279
LEU
423
A
GLY
424
n
280
GLY
424
A
n
281
425
A
n
282
426
A
n
283
427
A
n
284
428
A
n
285
429
A
n
286
430
A
n
287
431
A
n
288
432
A
n
289
433
A
SER
434
n
290
SER
434
A
VAL
435
n
291
VAL
435
A
PRO
436
n
292
PRO
436
A
LEU
437
n
293
LEU
437
A
TYR
438
n
294
TYR
438
A
LEU
439
n
295
LEU
439
A
ILE
440
n
296
ILE
440
A
TYR
441
n
297
TYR
441
A
PRO
442
n
298
PRO
442
A
SER
443
n
299
SER
443
A
VAL
444
n
300
VAL
444
A
GLU
445
n
301
GLU
445
A
ASN
446
n
302
ASN
446
A
VAL
447
n
303
VAL
447
A
ARG
448
n
304
ARG
448
A
THR
449
n
305
THR
449
A
SER
450
n
306
SER
450
A
LEU
451
n
307
LEU
451
A
GLU
452
n
308
GLU
452
A
GLY
453
n
309
GLY
453
A
TYR
454
n
310
TYR
454
A
PRO
455
n
311
PRO
455
A
ALA
456
n
312
ALA
456
A
GLY
457
n
313
GLY
457
A
GLY
458
n
314
GLY
458
A
SER
459
n
315
SER
459
A
LEU
460
n
316
LEU
460
A
PRO
461
n
317
PRO
461
A
TYR
462
n
318
TYR
462
A
SER
463
n
319
SER
463
A
ILE
464
n
320
ILE
464
A
GLN
465
n
321
GLN
465
A
THR
466
n
322
THR
466
A
ALA
467
n
323
ALA
467
A
GLU
468
n
324
GLU
468
A
LYS
469
n
325
LYS
469
A
GLN
470
n
326
GLN
470
A
ASN
471
n
327
ASN
471
A
TRP
472
n
328
TRP
472
A
LEU
473
n
329
LEU
473
A
HIS
474
n
330
HIS
474
A
SER
475
n
331
SER
475
A
TYR
476
n
332
TYR
476
A
PHE
477
n
333
PHE
477
A
HIS
478
n
334
HIS
478
A
LYS
479
n
335
LYS
479
A
TRP
480
n
336
TRP
480
A
SER
481
n
337
SER
481
A
ALA
482
n
338
ALA
482
A
GLU
483
n
339
GLU
483
A
THR
484
n
340
THR
484
A
SER
485
n
341
SER
485
A
GLY
486
n
342
GLY
486
A
ARG
487
n
343
ARG
487
A
SER
488
n
344
SER
488
A
ASN
489
n
345
ASN
489
A
ALA
490
n
346
ALA
490
A
MSE
491
n
347
MSE
491
A
PRO
492
n
348
PRO
492
A
HIS
493
n
349
HIS
493
A
ILE
494
n
350
ILE
494
A
LYS
495
n
351
LYS
495
A
THR
496
n
352
THR
496
A
TYR
497
n
353
TYR
497
A
MSE
498
n
354
MSE
498
A
ARG
499
n
355
ARG
499
A
PRO
500
n
356
PRO
500
A
SER
501
n
357
SER
501
A
PRO
502
n
358
PRO
502
A
ASP
503
n
359
ASP
503
A
PHE
504
n
360
PHE
504
A
SER
505
n
361
SER
505
A
LYS
506
n
362
LYS
506
A
ILE
507
n
363
ILE
507
A
ALA
508
n
364
ALA
508
A
TRP
509
n
365
TRP
509
A
PHE
510
n
366
PHE
510
A
LEU
511
n
367
LEU
511
A
VAL
512
n
368
VAL
512
A
THR
513
n
369
THR
513
A
SER
514
n
370
SER
514
A
ALA
515
n
371
ALA
515
A
ASN
516
n
372
ASN
516
A
LEU
517
n
373
LEU
517
A
SER
518
n
374
SER
518
A
LYS
519
n
375
LYS
519
A
ALA
520
n
376
ALA
520
A
ALA
521
n
377
ALA
521
A
TRP
522
n
378
TRP
522
A
GLY
523
n
379
GLY
523
A
ALA
524
n
380
ALA
524
A
LEU
525
n
381
LEU
525
A
GLU
526
n
382
GLU
526
A
LYS
527
n
383
LYS
527
A
ASN
528
n
384
ASN
528
A
GLY
529
n
385
GLY
529
A
THR
530
n
386
THR
530
A
GLN
531
n
387
GLN
531
A
LEU
532
n
388
LEU
532
A
MSE
533
n
389
MSE
533
A
ILE
534
n
390
ILE
534
A
ARG
535
n
391
ARG
535
A
SER
536
n
392
SER
536
A
TYR
537
n
393
TYR
537
A
GLU
538
n
394
GLU
538
A
LEU
539
n
395
LEU
539
A
GLY
540
n
396
GLY
540
A
VAL
541
n
397
VAL
541
A
LEU
542
n
398
LEU
542
A
PHE
543
n
399
PHE
543
A
LEU
544
n
400
LEU
544
A
PRO
545
n
401
PRO
545
A
SER
546
n
402
SER
546
A
ALA
547
n
403
ALA
547
A
LEU
548
n
404
LEU
548
A
GLY
549
n
405
GLY
549
A
LEU
550
n
406
LEU
550
A
ASP
551
n
407
ASP
551
A
SER
552
n
408
SER
552
A
PHE
553
n
409
PHE
553
A
LYS
554
n
410
LYS
554
A
VAL
555
n
411
VAL
555
A
LYS
556
n
412
LYS
556
A
n
413
557
A
n
414
558
A
n
415
559
A
n
416
560
A
n
417
561
A
n
418
562
A
n
419
563
A
n
420
564
A
n
421
565
A
n
422
566
A
n
423
567
A
ALA
568
n
424
ALA
568
A
THR
569
n
425
THR
569
A
PHE
570
n
426
PHE
570
A
PRO
571
n
427
PRO
571
A
VAL
572
n
428
VAL
572
A
PRO
573
n
429
PRO
573
A
TYR
574
n
430
TYR
574
A
ASP
575
n
431
ASP
575
A
LEU
576
n
432
LEU
576
A
PRO
577
n
433
PRO
577
A
PRO
578
n
434
PRO
578
A
GLU
579
n
435
GLU
579
A
LEU
580
n
436
LEU
580
A
TYR
581
n
437
TYR
581
A
GLY
582
n
438
GLY
582
A
SER
583
n
439
SER
583
A
LYS
584
n
440
LYS
584
A
ASP
585
n
441
ASP
585
A
ARG
586
n
442
ARG
586
A
PRO
587
n
443
PRO
587
A
TRP
588
n
444
TRP
588
A
ILE
589
n
445
ILE
589
A
TRP
590
n
446
TRP
590
A
ASN
591
n
447
ASN
591
A
ILE
592
n
448
ILE
592
A
PRO
593
n
449
PRO
593
A
TYR
594
n
450
TYR
594
A
VAL
595
n
451
VAL
595
A
LYS
596
n
452
LYS
596
A
ALA
597
n
453
ALA
597
A
PRO
598
n
454
PRO
598
A
ASP
599
n
455
ASP
599
A
THR
600
n
456
THR
600
A
HIS
601
n
457
HIS
601
A
GLY
602
n
458
GLY
602
A
ASN
603
n
459
ASN
603
A
MSE
604
n
460
MSE
604
A
TRP
605
n
461
TRP
605
A
VAL
606
n
462
VAL
606
A
PRO
607
n
463
PRO
607
A
SER
608
n
464
SER
608
A
author_defined_assembly
1
monomeric
A
MSE
157
SELENOMETHIONINE
A
MSE
13
MET
A
MSE
266
SELENOMETHIONINE
A
MSE
122
MET
A
MSE
267
SELENOMETHIONINE
A
MSE
123
MET
A
MSE
420
SELENOMETHIONINE
A
MSE
276
MET
A
MSE
491
SELENOMETHIONINE
A
MSE
347
MET
A
MSE
498
SELENOMETHIONINE
A
MSE
354
MET
A
MSE
533
SELENOMETHIONINE
A
MSE
389
MET
A
MSE
604
SELENOMETHIONINE
A
MSE
460
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
TYR
167
A
N
TYR
23
A
O
ILE
296
A
O
ILE
152
A
O
TRP
297
A
O
TRP
153
A
N
ILE
279
A
N
ILE
135
A
O
ARG
276
A
O
ARG
132
A
N
LEU
269
A
N
LEU
125
A
O
MSE
266
A
O
MSE
122
A
N
PHE
202
A
N
PHE
58
A
N
GLN
201
A
N
GLN
57
A
O
LEU
225
A
O
LEU
81
A
N
ILE
224
A
N
ILE
80
A
O
SER
249
A
O
SER
105
A
N
TYR
353
A
N
TYR
209
A
O
LEU
542
A
O
LEU
398
A
O
PHE
543
A
O
PHE
399
A
N
PHE
510
A
N
PHE
366
A
O
LEU
511
A
O
LEU
367
A
N
TYR
497
A
N
TYR
353
A
O
MSE
498
A
O
MSE
354
A
N
VAL
395
A
N
VAL
251
A
N
GLY
396
A
N
GLY
252
A
O
ILE
440
A
O
ILE
296
A
N
LEU
439
A
N
LEU
295
A
O
HIS
478
A
O
HIS
334
A
N
TYR
353
A
N
TYR
209
A
O
LEU
542
A
O
LEU
398
A
O
PHE
543
A
O
PHE
399
A
N
PHE
510
A
N
PHE
366
A
N
ILE
507
A
N
ILE
363
A
O
PHE
553
A
O
PHE
409
A
N
LYS
554
A
N
LYS
410
A
O
PHE
570
A
O
PHE
426
A
N
PHE
362
A
N
PHE
218
A
O
LEU
532
A
O
LEU
388
A
O
GLN
531
A
O
GLN
387
A
N
GLU
526
A
N
GLU
382
1
A
CG
LEU
145
A
CG
LEU
1
1
Y
1
A
CD1
LEU
145
A
CD1
LEU
1
1
Y
1
A
CD2
LEU
145
A
CD2
LEU
1
1
Y
1
A
CG
GLU
390
A
CG
GLU
246
1
Y
1
A
CD
GLU
390
A
CD
GLU
246
1
Y
1
A
OE1
GLU
390
A
OE1
GLU
246
1
Y
1
A
OE2
GLU
390
A
OE2
GLU
246
1
Y
1
A
CG
LYS
556
A
CG
LYS
412
1
Y
1
A
CD
LYS
556
A
CD
LYS
412
1
Y
1
A
CE
LYS
556
A
CE
LYS
412
1
Y
1
A
NZ
LYS
556
A
NZ
LYS
412
1
Y
1
A
SER
384
A
SER
240
1
Y
1
A
SER
385
A
SER
241
1
Y
1
A
MSE
386
A
MSE
242
1
Y
1
A
PRO
387
A
PRO
243
1
Y
1
A
ASN
388
A
ASN
244
1
Y
1
A
LYS
425
A
LYS
281
1
Y
1
A
GLU
426
A
GLU
282
1
Y
1
A
SER
427
A
SER
283
1
Y
1
A
LYS
428
A
LYS
284
1
Y
1
A
THR
429
A
THR
285
1
Y
1
A
PRO
430
A
PRO
286
1
Y
1
A
GLY
431
A
GLY
287
1
Y
1
A
LYS
432
A
LYS
288
1
Y
1
A
SER
433
A
SER
289
1
Y
1
A
GLN
557
A
GLN
413
1
Y
1
A
LYS
558
A
LYS
414
1
Y
1
A
PHE
559
A
PHE
415
1
Y
1
A
PHE
560
A
PHE
416
1
Y
1
A
ALA
561
A
ALA
417
1
Y
1
A
GLY
562
A
GLY
418
1
Y
1
A
SER
563
A
SER
419
1
Y
1
A
GLN
564
A
GLN
420
1
Y
1
A
GLU
565
A
GLU
421
1
Y
1
A
PRO
566
A
PRO
422
1
Y
1
A
MSE
567
A
MSE
423
1
Y
1
A
A
O
O
HOH
HOH
728
816
1.98
1
6.87
0.90
118.30
125.17
A
A
A
CB
CG
OD2
ASP
ASP
ASP
159
159
159
N
1
7.45
0.90
118.30
125.75
A
A
A
CB
CG
OD2
ASP
ASP
ASP
209
209
209
N
1
7.12
0.90
118.30
125.42
A
A
A
CB
CG
OD2
ASP
ASP
ASP
407
407
407
N
1
5.86
0.90
118.30
124.16
A
A
A
CB
CG
OD2
ASP
ASP
ASP
551
551
551
N
1
A
A
O
O
HOH
HOH
845
845
1.85
1_555
2_655
1
A
A
OG
NZ
SER
LYS
365
380
2.19
1_555
2_655
1
A
ARG
232
46.51
-125.34
1
A
HIS
290
-95.64
-69.92
1
A
GLU
390
-87.05
-100.24
1
A
SER
391
-81.53
35.60
1
A
TRP
411
-156.79
-44.23
1
A
GLN
470
-142.91
53.54
1
A
ALA
482
-140.74
45.67
0.2290000
0.1980000
0.1980000
0.1980000
1.69
30.0
3349
66989
66989
random
1
0.0
0.0
MAD
refmac5
1.69
30.0
345
3850
0
0
3505
0.018
1.813
1.69
30.0
1JY1
59625
59625
0.0
0.0
0.0630000
0.0630000
1
13.42
4.48
96.0
0.1920000
1.69
1.76
10.17
5186
19.2000000
1.98
76.4
phasing
SOLVE
refinement
REFMAC
data reduction
DENZO
data scaling
SCALEPACK
CRYSTAL STRUCTURE OF HUMAN TYROSYL-DNA PHOSPHODIESTERASE (TDP1)
1
N
N
2
N
N
The biological assembly is a monomer.
A
ASP
153
A
ASP
9
HELX_P
A
MSE
157
A
MSE
13
5
1
5
A
LYS
175
A
LYS
31
HELX_P
A
SER
180
A
SER
36
5
2
6
A
HIS
184
A
HIS
40
HELX_P
A
LEU
189
A
LEU
45
1
3
6
A
SER
190
A
SER
46
HELX_P
A
GLY
194
A
GLY
50
5
4
5
A
ASP
207
A
ASP
63
HELX_P
A
TYR
215
A
TYR
71
1
5
9
A
PRO
216
A
PRO
72
HELX_P
A
ARG
220
A
ARG
76
5
6
5
A
LYS
231
A
LYS
87
HELX_P
A
LYS
243
A
LYS
99
1
7
13
A
ILE
285
A
ILE
141
HELX_P
A
HIS
290
A
HIS
146
5
8
6
A
HIS
318
A
HIS
174
HELX_P
A
ALA
329
A
ALA
185
1
9
12
A
TYR
330
A
TYR
186
HELX_P
A
ASN
331
A
ASN
187
5
10
2
A
ALA
332
A
ALA
188
HELX_P
A
SER
334
A
SER
190
5
11
3
A
LEU
335
A
LEU
191
HELX_P
A
LYS
344
A
LYS
200
1
12
10
A
SER
365
A
SER
221
HELX_P
A
ASN
369
A
ASN
225
5
13
5
A
TRP
370
A
TRP
226
HELX_P
A
ALA
383
A
ALA
239
1
14
14
A
GLU
415
A
GLU
271
HELX_P
A
LEU
421
A
LEU
277
1
15
7
A
SER
443
A
SER
299
HELX_P
A
THR
449
A
THR
305
1
16
7
A
GLY
453
A
GLY
309
HELX_P
A
LEU
460
A
LEU
316
5
17
8
A
SER
463
A
SER
319
HELX_P
A
GLU
468
A
GLU
324
1
18
6
A
LYS
469
A
LYS
325
HELX_P
A
SER
475
A
SER
331
5
19
7
A
ALA
482
A
ALA
338
HELX_P
A
GLY
486
A
GLY
342
5
20
5
A
SER
518
A
SER
374
HELX_P
A
GLY
523
A
GLY
379
1
21
6
A
LEU
544
A
LEU
400
HELX_P
A
GLY
549
A
GLY
405
5
22
6
covale
1.321
both
A
ASP
156
A
C
ASP
12
1_555
A
MSE
157
A
N
MSE
13
1_555
covale
1.322
both
A
MSE
157
A
C
MSE
13
1_555
A
LEU
158
A
N
LEU
14
1_555
covale
1.332
both
A
LYS
265
A
C
LYS
121
1_555
A
MSE
266
A
N
MSE
122
1_555
covale
1.329
both
A
MSE
266
A
C
MSE
122
1_555
A
MSE
267
A
N
MSE
123
1_555
covale
1.336
both
A
MSE
267
A
C
MSE
123
1_555
A
LEU
268
A
N
LEU
124
1_555
covale
1.328
both
A
SER
419
A
C
SER
275
1_555
A
MSE
420
A
N
MSE
276
1_555
covale
1.330
both
A
MSE
420
A
C
MSE
276
1_555
A
LEU
421
A
N
LEU
277
1_555
covale
1.322
both
A
ALA
490
A
C
ALA
346
1_555
A
MSE
491
A
N
MSE
347
1_555
covale
1.333
both
A
MSE
491
A
C
MSE
347
1_555
A
PRO
492
A
N
PRO
348
1_555
covale
1.352
both
A
TYR
497
A
C
TYR
353
1_555
A
MSE
498
A
N
MSE
354
1_555
covale
1.331
both
A
MSE
498
A
C
MSE
354
1_555
A
ARG
499
A
N
ARG
355
1_555
covale
1.321
both
A
LEU
532
A
C
LEU
388
1_555
A
MSE
533
A
N
MSE
389
1_555
covale
1.318
both
A
MSE
533
A
C
MSE
389
1_555
A
ILE
534
A
N
ILE
390
1_555
covale
1.331
both
A
ASN
603
A
C
ASN
459
1_555
A
MSE
604
A
N
MSE
460
1_555
covale
1.317
both
A
MSE
604
A
C
MSE
460
1_555
A
TRP
605
A
N
TRP
461
1_555
HYDROLASE
PLD Superfamily, HYDROLASE
A
LEU
576
A
LEU
432
1
A
PRO
577
A
PRO
433
1.12
TYDP1_HUMAN
UNP
1
149
Q9NUW8
GEGQDIWDMLDKGNPFQFYLTRVSGVKPKYNSGALHIKDILSPLFGTLVSSAQFNYCFDVDWLVKQYPPEFRKKPILLVH
GDKREAKAHLHAQAKPYENISLCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIHADWHQKTQGIWLSPLYPRIADG
THKSGESPTHFKADLISYLMAYNAPSLKEWIDVIHKHDLSETNVYLIGSTPGRFQGSQKDNWGHFRLKKLLKDHASSMPN
AESWPVVGQFSSVGSLGADESKWLCSEFKESMLTLGKESKTPGKSSVPLYLIYPSVENVRTSLEGYPAGGSLPYSIQTAE
KQNWLHSYFHKWSAETSGRSNAMPHIKTYMRPSPDFSKIAWFLVTSANLSKAAWGALEKNGTQLMIRSYELGVLFLPSAF
GLDSFKVKQKFFAGSQEPMATFPVPYDLPPELYGSKDRPWIWNIPYVKAPDTHGNMWVPS
149
608
1JY1
149
608
Q9NUW8
A
1
5
464
1
expression tag
LEU
145
1JY1
A
Q9NUW8
UNP
1
1
expression tag
GLU
146
1JY1
A
Q9NUW8
UNP
2
1
expression tag
ASP
147
1JY1
A
Q9NUW8
UNP
3
1
expression tag
PRO
148
1JY1
A
Q9NUW8
UNP
4
1
MET
modified residue
MSE
157
1JY1
A
Q9NUW8
UNP
157
13
1
MET
modified residue
MSE
266
1JY1
A
Q9NUW8
UNP
266
122
1
MET
modified residue
MSE
267
1JY1
A
Q9NUW8
UNP
267
123
1
ASP
engineered mutation
ASN
322
1JY1
A
Q9NUW8
UNP
322
178
1
MET
engineered mutation
THR
328
1JY1
A
Q9NUW8
UNP
328
184
1
MET
modified residue
MSE
386
1JY1
A
Q9NUW8
UNP
386
242
1
MET
modified residue
MSE
420
1JY1
A
Q9NUW8
UNP
420
276
1
MET
modified residue
MSE
491
1JY1
A
Q9NUW8
UNP
491
347
1
MET
modified residue
MSE
498
1JY1
A
Q9NUW8
UNP
498
354
1
MET
modified residue
MSE
533
1JY1
A
Q9NUW8
UNP
533
389
1
PHE
engineered mutation
LEU
548
1JY1
A
Q9NUW8
UNP
548
404
1
MET
modified residue
MSE
567
1JY1
A
Q9NUW8
UNP
567
423
1
MET
modified residue
MSE
604
1JY1
A
Q9NUW8
UNP
604
460
7
7
5
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
A
PHE
166
A
PHE
22
A
LEU
168
A
LEU
24
A
GLY
295
A
GLY
151
A
LEU
298
A
LEU
154
A
LEU
275
A
LEU
131
A
HIS
280
A
HIS
136
A
MSE
266
A
MSE
122
A
TYR
271
A
TYR
127
A
LEU
196
A
LEU
52
A
PHE
202
A
PHE
58
A
ILE
224
A
ILE
80
A
HIS
228
A
HIS
84
A
ILE
248
A
ILE
104
A
GLN
252
A
GLN
108
A
TYR
353
A
TYR
209
A
SER
357
A
SER
213
A
GLU
538
A
GLU
394
A
PHE
543
A
PHE
399
A
LYS
506
A
LYS
362
A
THR
513
A
THR
369
A
LYS
495
A
LYS
351
A
PRO
500
A
PRO
356
A
VAL
394
A
VAL
250
A
GLN
397
A
GLN
253
A
LEU
437
A
LEU
293
A
ILE
440
A
ILE
296
A
PHE
477
A
PHE
333
A
HIS
478
A
HIS
334
A
TYR
353
A
TYR
209
A
SER
357
A
SER
213
A
GLU
538
A
GLU
394
A
PHE
543
A
PHE
399
A
LYS
506
A
LYS
362
A
THR
513
A
THR
369
A
PHE
553
A
PHE
409
A
VAL
555
A
VAL
411
A
THR
569
A
THR
425
A
PHE
570
A
PHE
426
A
GLY
360
A
GLY
216
A
GLN
363
A
GLN
219
A
GLN
531
A
GLN
387
A
ILE
534
A
ILE
390
A
ALA
524
A
ALA
380
A
GLU
526
A
GLU
382
18
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