1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Evanics, F. Maurmann, L. Yang, W.W. Bose, R.N. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking NE Biochim.Biophys.Acta BBACAQ 0113 0006-3002 1651 163 171 10.1016/S1570-9639(03)00266-8 14499601 Nuclear magnetic resonance structures of the zinc finger domain of human DNA polymerase-alpha. 2003 UK J.CHEM.SOC.,CHEM.COMMUN. 1359-7345 10 1128 1129 10.1039/b301356a Unwinding of DNA polymerases by the antitumor drug, cis-diamminedichloroplatinum(II) 2003 10.2210/pdb1k18/pdb pdb_00001k18 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 SINGLE WAVELENGTH M 1 1.0 3536.204 DNA POLYMERASE ALPHA CATALYTIC SUBUNIT 2.7.7.7 zinc finger domain (residues 1347-1377) 1 syn polymer no no ICEEPTCRNRTRHLPLQFSRTGPLCPACMKA ICEEPTCRNRTRHLPLQFSRTGPLCPACMKA A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n database_2 pdbx_nmr_software pdbx_nmr_spectrometer pdbx_struct_assembly pdbx_struct_oper_list repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 2003-06-24 1 1 2008-04-27 1 2 2011-07-13 1 3 2022-02-23 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_nmr_software.name _pdbx_nmr_spectrometer.model NMR structures of the zinc finger domain of human DNA polymerase-alpha RCSB Y RCSB 2001-09-24 REL REL The sequence occurs naturally in humans. sample This structure was determined using standard 2D homonuclear experiments. The NOESY mixing time was 200 ms. 1 2D NOESY DQF-COSY TOCSY 6.8 ambient 296 K 190 NOE derived distance restraints and 4 dihedral angle restraints were used for the calculations. simulated annealing followed by restrained molecular mechanics minimized average structure 3mM Zinc Finger Peptide; 3.6 mM Zn(II)nitrate 90% H2O/10% D2O BRUKER processing XwinNMR 3.0 Borgias; Thomas; Liu; Kumar; Tonelli iterative matrix relaxation CORMA 5.2 Borgias; Thomas; Liu; Kumar; Tonelli iterative matrix relaxation MARDIGRAS 3.2 MSI structure solution DGII 97.0 MSI refinement Discover 97.0 800 Bruker AVANCE 500 Varian UNITY ILE 1 n 1 ILE 1 A CYS 2 n 2 CYS 2 A GLU 3 n 3 GLU 3 A GLU 4 n 4 GLU 4 A PRO 5 n 5 PRO 5 A THR 6 n 6 THR 6 A CYS 7 n 7 CYS 7 A ARG 8 n 8 ARG 8 A ASN 9 n 9 ASN 9 A ARG 10 n 10 ARG 10 A THR 11 n 11 THR 11 A ARG 12 n 12 ARG 12 A HIS 13 n 13 HIS 13 A LEU 14 n 14 LEU 14 A PRO 15 n 15 PRO 15 A LEU 16 n 16 LEU 16 A GLN 17 n 17 GLN 17 A PHE 18 n 18 PHE 18 A SER 19 n 19 SER 19 A ARG 20 n 20 ARG 20 A THR 21 n 21 THR 21 A GLY 22 n 22 GLY 22 A PRO 23 n 23 PRO 23 A LEU 24 n 24 LEU 24 A CYS 25 n 25 CYS 25 A PRO 26 n 26 PRO 26 A ALA 27 n 27 ALA 27 A CYS 28 n 28 CYS 28 A MET 29 n 29 MET 29 A LYS 30 n 30 LYS 30 A ALA 31 n 31 ALA 31 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A A GLU PRO 4 5 138.79 1 A A THR ARG 11 12 149.47 1 A A LEU PRO 14 15 142.24 1 A A PRO LEU 15 16 129.27 1 A A GLN PHE 17 18 118.37 1 A A SER ARG 19 20 134.59 1 A A LEU CYS 24 25 -56.98 1 A A PRO ALA 26 27 62.89 1 A PHE 18 0.100 SIDE CHAIN 1 16.83 2.70 111.00 127.83 A A A N CA C GLU GLU GLU 4 4 4 N 1 4.18 0.50 120.30 124.48 A A A NE CZ NH1 ARG ARG ARG 8 8 8 N 1 4.13 0.50 120.30 124.43 A A A NE CZ NH1 ARG ARG ARG 10 10 10 N 1 4.46 0.50 120.30 124.76 A A A NE CZ NH1 ARG ARG ARG 12 12 12 N 1 -3.05 0.50 120.30 117.25 A A A NE CZ NH2 ARG ARG ARG 12 12 12 N 1 8.43 1.30 111.50 119.93 A A A ND1 CE1 NE2 HIS HIS HIS 13 13 13 N 1 4.22 0.50 120.30 124.52 A A A NE CZ NH1 ARG ARG ARG 20 20 20 N 1 -3.04 0.50 120.30 117.26 A A A NE CZ NH2 ARG ARG ARG 20 20 20 N 1 A A CD OE2 GLU GLU 3 3 0.108 0.011 1.252 1.360 N 1 A A CD OE2 GLU GLU 4 4 0.108 0.011 1.252 1.360 N 1 A GLU 4 -66.40 3.53 1 A PRO 15 -66.39 20.86 1 A PRO 23 -113.27 69.97 minimized average Minimized Average NMR Structure of the Zinc Finger Domain of Human DNA Polymerase-alpha 1 N N A GLU 4 A GLU 4 HELX_P A HIS 13 A HIS 13 1 1 10 TRANSFERASE zinc finger protein, DNA binding domain, polymerase-alpha, TRANSFERASE A GLY 22 A GLY 22 1 A PRO 23 A PRO 23 0.53 A CYS 25 A CYS 25 1 A PRO 26 A PRO 26 16.95 DPOA_HUMAN UNP 1 1347 P09884 ICEEPTCRNRTRHLPLQFSRTGPLCPACMKA 1347 1377 1K18 1 31 P09884 A 1 1 31