.008846 .005107 .000000 .000000 .010215 .000000 .000000 .000000 .015980 .00000 .00000 .00000 Silvian, L.F. Toth, E.A. Pham, P. Goodman, M.F. Ellenberger, T. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 113.040 113.040 62.580 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N O N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 R C N 309 N O N 310 N C N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 N C Y 326 N C Y 327 N C Y 328 N C Y 329 N C Y 330 N C Y 331 N C N 332 N O N 333 N O N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N N N 346 S C N 347 N C N 348 N O N 349 N C N 350 N C N 351 N C N 352 N O N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing Y 317 N doub Y 318 N sing Y 319 N sing N 320 N sing Y 321 N doub N 322 N sing Y 323 N doub N 324 N sing Y 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N doub N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing US Nat.Struct.Biol. NSBIEW 2024 1072-8368 8 984 989 10.1038/nsb1101-984 11685247 Crystal structure of a DinB family error-prone DNA polymerase from Sulfolobus solfataricus. 2001 10.2210/pdb1k1s/pdb pdb_00001k1s 1.000000 .000000 .000000 .000000 1.000000 .000000 .000000 .000000 1.000000 .00000 .00000 .00000 100 1 Wiggler CCD 2001-07-26 BRANDEIS - B4 Si 111 channel SINGLE WAVELENGTH M x-ray 1 1.1 1.0 X25 NSLS 1.1 SYNCHROTRON NSLS BEAMLINE X25 40029.773 DBH protein C31S 1 man polymer 18.015 water 31 nat water no no MIVIFVDFDYFFAQVEEVLNPQYKGKPLVVSVYSGRTKTSGAVATANYEARKLGVKAGMPIIKAMQIAPSAIYVPMRKPI YEAFSNRIMNLLNKHADKIEVASIDEAYLDVTNKVEGNFENGIELARKIKQEILEKEKITVTVGVAPNKILAKIIADKSK PNGLGVIRPTEVQDFLNELDIDEIPGIGSVLARRLNELGIQKLRDILSKNYNELEKITGKAKALYLLKLAQNKYSEPVEN KSKIPHGRYLTLPYNTRDVKVILPYLKKAINEAYNKVNGIPMRITVIAIMEDLDILSKGKKFKHGISIDNAYKVAEDLLR ELLVRDKRRNVRRIGVKLDNIIINKTNLSDFFDI MIVIFVDFDYFFAQVEEVLNPQYKGKPLVVSVYSGRTKTSGAVATANYEARKLGVKAGMPIIKAMQIAPSAIYVPMRKPI YEAFSNRIMNLLNKHADKIEVASIDEAYLDVTNKVEGNFENGIELARKIKQEILEKEKITVTVGVAPNKILAKIIADKSK PNGLGVIRPTEVQDFLNELDIDEIPGIGSVLARRLNELGIQKLRDILSKNYNELEKITGKAKALYLLKLAQNKYSEPVEN KSKIPHGRYLTLPYNTRDVKVILPYLKKAINEAYNKVNGIPMRITVIAIMEDLDILSKGKKFKHGISIDNAYKVAEDLLR ELLVRDKRRNVRRIGVKLDNIIINKTNLSDFFDI A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Sulfolobus Escherichia sample DINB 2287 Sulfolobus solfataricus 562 Escherichia coli BL21 (RIL) plasmid pet17 1 2.88 57.32 VAPOR DIFFUSION, HANGING DROP 6.2 Peg2000, sodium cacodylate, sodium fluoride, magnesium chloride, sucrose monolaurate, dATP, DNA hairpin (5' TTTTTTTTTTAGATGTCGATGCAATCGACATCT* 3' terminated by 3'deoxythymine ), pH 6.2, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K 298.0 database_2 struct_ref_seq_dif chem_comp_atom chem_comp_bond pdbx_initial_refinement_model repository Initial release Version format compliance Version format compliance Database references Data collection Refinement description 1 0 2001-10-31 1 1 2008-04-27 1 2 2011-07-13 1 3 2021-10-27 1 4 2023-08-16 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details Crystal Structure of a DinB Family Error Prone DNA Polymerase from Sulfolobus solfataricus RCSB Y RCSB 2001-09-25 REL REL HOH water 1IM4 PDB entry 1IM4 PDB experimental model HOH 501 2 HOH HOH 501 A HOH 502 2 HOH HOH 502 A HOH 503 2 HOH HOH 503 A HOH 504 2 HOH HOH 504 A HOH 505 2 HOH HOH 505 A HOH 506 2 HOH HOH 506 A HOH 507 2 HOH HOH 507 A HOH 508 2 HOH HOH 508 A HOH 509 2 HOH HOH 509 A HOH 510 2 HOH HOH 510 A HOH 511 2 HOH HOH 511 A HOH 512 2 HOH HOH 512 A HOH 513 2 HOH HOH 513 A HOH 514 2 HOH HOH 514 A HOH 515 2 HOH HOH 515 A HOH 516 2 HOH HOH 516 A HOH 517 2 HOH HOH 517 A HOH 518 2 HOH HOH 518 A HOH 519 2 HOH HOH 519 A HOH 520 2 HOH HOH 520 A HOH 521 2 HOH HOH 521 A HOH 522 2 HOH HOH 522 A HOH 523 2 HOH HOH 523 A HOH 524 2 HOH HOH 524 A HOH 525 2 HOH HOH 525 A HOH 526 2 HOH HOH 526 A HOH 527 2 HOH HOH 527 A HOH 528 2 HOH HOH 528 A HOH 529 2 HOH HOH 529 A HOH 530 2 HOH HOH 530 A HOH 531 2 HOH HOH 531 A MET 1 n 1 MET 1 A ILE 2 n 2 ILE 2 A VAL 3 n 3 VAL 3 A ILE 4 n 4 ILE 4 A PHE 5 n 5 PHE 5 A VAL 6 n 6 VAL 6 A ASP 7 n 7 ASP 7 A PHE 8 n 8 PHE 8 A ASP 9 n 9 ASP 9 A TYR 10 n 10 TYR 10 A PHE 11 n 11 PHE 11 A PHE 12 n 12 PHE 12 A ALA 13 n 13 ALA 13 A GLN 14 n 14 GLN 14 A VAL 15 n 15 VAL 15 A GLU 16 n 16 GLU 16 A GLU 17 n 17 GLU 17 A VAL 18 n 18 VAL 18 A LEU 19 n 19 LEU 19 A ASN 20 n 20 ASN 20 A PRO 21 n 21 PRO 21 A GLN 22 n 22 GLN 22 A TYR 23 n 23 TYR 23 A LYS 24 n 24 LYS 24 A GLY 25 n 25 GLY 25 A LYS 26 n 26 LYS 26 A PRO 27 n 27 PRO 27 A LEU 28 n 28 LEU 28 A VAL 29 n 29 VAL 29 A VAL 30 n 30 VAL 30 A SER 31 n 31 SER 31 A VAL 32 n 32 VAL 32 A TYR 33 n 33 TYR 33 A SER 34 n 34 SER 34 A GLY 35 n 35 GLY 35 A n 36 36 A n 37 37 A n 38 38 A THR 39 n 39 THR 39 A SER 40 n 40 SER 40 A GLY 41 n 41 GLY 41 A ALA 42 n 42 ALA 42 A VAL 43 n 43 VAL 43 A ALA 44 n 44 ALA 44 A THR 45 n 45 THR 45 A ALA 46 n 46 ALA 46 A ASN 47 n 47 ASN 47 A TYR 48 n 48 TYR 48 A GLU 49 n 49 GLU 49 A ALA 50 n 50 ALA 50 A ARG 51 n 51 ARG 51 A LYS 52 n 52 LYS 52 A LEU 53 n 53 LEU 53 A GLY 54 n 54 GLY 54 A VAL 55 n 55 VAL 55 A LYS 56 n 56 LYS 56 A ALA 57 n 57 ALA 57 A GLY 58 n 58 GLY 58 A MET 59 n 59 MET 59 A PRO 60 n 60 PRO 60 A ILE 61 n 61 ILE 61 A ILE 62 n 62 ILE 62 A LYS 63 n 63 LYS 63 A ALA 64 n 64 ALA 64 A MET 65 n 65 MET 65 A GLN 66 n 66 GLN 66 A ILE 67 n 67 ILE 67 A ALA 68 n 68 ALA 68 A PRO 69 n 69 PRO 69 A SER 70 n 70 SER 70 A ALA 71 n 71 ALA 71 A ILE 72 n 72 ILE 72 A TYR 73 n 73 TYR 73 A VAL 74 n 74 VAL 74 A PRO 75 n 75 PRO 75 A MET 76 n 76 MET 76 A ARG 77 n 77 ARG 77 A LYS 78 n 78 LYS 78 A PRO 79 n 79 PRO 79 A ILE 80 n 80 ILE 80 A TYR 81 n 81 TYR 81 A GLU 82 n 82 GLU 82 A ALA 83 n 83 ALA 83 A PHE 84 n 84 PHE 84 A SER 85 n 85 SER 85 A ASN 86 n 86 ASN 86 A ARG 87 n 87 ARG 87 A ILE 88 n 88 ILE 88 A MET 89 n 89 MET 89 A ASN 90 n 90 ASN 90 A LEU 91 n 91 LEU 91 A LEU 92 n 92 LEU 92 A ASN 93 n 93 ASN 93 A LYS 94 n 94 LYS 94 A HIS 95 n 95 HIS 95 A ALA 96 n 96 ALA 96 A ASP 97 n 97 ASP 97 A LYS 98 n 98 LYS 98 A ILE 99 n 99 ILE 99 A GLU 100 n 100 GLU 100 A VAL 101 n 101 VAL 101 A ALA 102 n 102 ALA 102 A SER 103 n 103 SER 103 A ILE 104 n 104 ILE 104 A ASP 105 n 105 ASP 105 A GLU 106 n 106 GLU 106 A ALA 107 n 107 ALA 107 A TYR 108 n 108 TYR 108 A LEU 109 n 109 LEU 109 A ASP 110 n 110 ASP 110 A VAL 111 n 111 VAL 111 A THR 112 n 112 THR 112 A ASN 113 n 113 ASN 113 A LYS 114 n 114 LYS 114 A VAL 115 n 115 VAL 115 A GLU 116 n 116 GLU 116 A GLY 117 n 117 GLY 117 A ASN 118 n 118 ASN 118 A PHE 119 n 119 PHE 119 A GLU 120 n 120 GLU 120 A ASN 121 n 121 ASN 121 A GLY 122 n 122 GLY 122 A ILE 123 n 123 ILE 123 A GLU 124 n 124 GLU 124 A LEU 125 n 125 LEU 125 A ALA 126 n 126 ALA 126 A ARG 127 n 127 ARG 127 A LYS 128 n 128 LYS 128 A ILE 129 n 129 ILE 129 A LYS 130 n 130 LYS 130 A GLN 131 n 131 GLN 131 A GLU 132 n 132 GLU 132 A ILE 133 n 133 ILE 133 A LEU 134 n 134 LEU 134 A GLU 135 n 135 GLU 135 A LYS 136 n 136 LYS 136 A GLU 137 n 137 GLU 137 A LYS 138 n 138 LYS 138 A ILE 139 n 139 ILE 139 A THR 140 n 140 THR 140 A VAL 141 n 141 VAL 141 A THR 142 n 142 THR 142 A VAL 143 n 143 VAL 143 A GLY 144 n 144 GLY 144 A VAL 145 n 145 VAL 145 A ALA 146 n 146 ALA 146 A PRO 147 n 147 PRO 147 A ASN 148 n 148 ASN 148 A LYS 149 n 149 LYS 149 A ILE 150 n 150 ILE 150 A LEU 151 n 151 LEU 151 A ALA 152 n 152 ALA 152 A LYS 153 n 153 LYS 153 A ILE 154 n 154 ILE 154 A ILE 155 n 155 ILE 155 A ALA 156 n 156 ALA 156 A ASP 157 n 157 ASP 157 A LYS 158 n 158 LYS 158 A SER 159 n 159 SER 159 A LYS 160 n 160 LYS 160 A PRO 161 n 161 PRO 161 A ASN 162 n 162 ASN 162 A GLY 163 n 163 GLY 163 A LEU 164 n 164 LEU 164 A GLY 165 n 165 GLY 165 A VAL 166 n 166 VAL 166 A ILE 167 n 167 ILE 167 A ARG 168 n 168 ARG 168 A PRO 169 n 169 PRO 169 A THR 170 n 170 THR 170 A GLU 171 n 171 GLU 171 A VAL 172 n 172 VAL 172 A GLN 173 n 173 GLN 173 A ASP 174 n 174 ASP 174 A PHE 175 n 175 PHE 175 A LEU 176 n 176 LEU 176 A ASN 177 n 177 ASN 177 A GLU 178 n 178 GLU 178 A LEU 179 n 179 LEU 179 A ASP 180 n 180 ASP 180 A ILE 181 n 181 ILE 181 A ASP 182 n 182 ASP 182 A GLU 183 n 183 GLU 183 A ILE 184 n 184 ILE 184 A PRO 185 n 185 PRO 185 A GLY 186 n 186 GLY 186 A ILE 187 n 187 ILE 187 A GLY 188 n 188 GLY 188 A SER 189 n 189 SER 189 A VAL 190 n 190 VAL 190 A LEU 191 n 191 LEU 191 A ALA 192 n 192 ALA 192 A ARG 193 n 193 ARG 193 A ARG 194 n 194 ARG 194 A LEU 195 n 195 LEU 195 A ASN 196 n 196 ASN 196 A GLU 197 n 197 GLU 197 A LEU 198 n 198 LEU 198 A GLY 199 n 199 GLY 199 A ILE 200 n 200 ILE 200 A GLN 201 n 201 GLN 201 A LYS 202 n 202 LYS 202 A LEU 203 n 203 LEU 203 A ARG 204 n 204 ARG 204 A ASP 205 n 205 ASP 205 A ILE 206 n 206 ILE 206 A LEU 207 n 207 LEU 207 A SER 208 n 208 SER 208 A LYS 209 n 209 LYS 209 A ASN 210 n 210 ASN 210 A TYR 211 n 211 TYR 211 A ASN 212 n 212 ASN 212 A GLU 213 n 213 GLU 213 A LEU 214 n 214 LEU 214 A GLU 215 n 215 GLU 215 A LYS 216 n 216 LYS 216 A ILE 217 n 217 ILE 217 A THR 218 n 218 THR 218 A GLY 219 n 219 GLY 219 A LYS 220 n 220 LYS 220 A ALA 221 n 221 ALA 221 A LYS 222 n 222 LYS 222 A ALA 223 n 223 ALA 223 A LEU 224 n 224 LEU 224 A TYR 225 n 225 TYR 225 A LEU 226 n 226 LEU 226 A LEU 227 n 227 LEU 227 A LYS 228 n 228 LYS 228 A LEU 229 n 229 LEU 229 A ALA 230 n 230 ALA 230 A GLN 231 n 231 GLN 231 A ASN 232 n 232 ASN 232 A LYS 233 n 233 LYS 233 A TYR 234 n 234 TYR 234 A SER 235 n 235 SER 235 A GLU 236 n 236 GLU 236 A PRO 237 n 237 PRO 237 A VAL 238 n 238 VAL 238 A GLU 239 n 239 GLU 239 A ASN 240 n 240 ASN 240 A LYS 241 n 241 LYS 241 A SER 242 n 242 SER 242 A LYS 243 n 243 LYS 243 A ILE 244 n 244 ILE 244 A PRO 245 n 245 PRO 245 A HIS 246 n 246 HIS 246 A GLY 247 n 247 GLY 247 A ARG 248 n 248 ARG 248 A TYR 249 n 249 TYR 249 A LEU 250 n 250 LEU 250 A THR 251 n 251 THR 251 A LEU 252 n 252 LEU 252 A PRO 253 n 253 PRO 253 A TYR 254 n 254 TYR 254 A ASN 255 n 255 ASN 255 A THR 256 n 256 THR 256 A ARG 257 n 257 ARG 257 A ASP 258 n 258 ASP 258 A VAL 259 n 259 VAL 259 A LYS 260 n 260 LYS 260 A VAL 261 n 261 VAL 261 A ILE 262 n 262 ILE 262 A LEU 263 n 263 LEU 263 A PRO 264 n 264 PRO 264 A TYR 265 n 265 TYR 265 A LEU 266 n 266 LEU 266 A LYS 267 n 267 LYS 267 A LYS 268 n 268 LYS 268 A ALA 269 n 269 ALA 269 A ILE 270 n 270 ILE 270 A ASN 271 n 271 ASN 271 A GLU 272 n 272 GLU 272 A ALA 273 n 273 ALA 273 A TYR 274 n 274 TYR 274 A ASN 275 n 275 ASN 275 A LYS 276 n 276 LYS 276 A VAL 277 n 277 VAL 277 A ASN 278 n 278 ASN 278 A GLY 279 n 279 GLY 279 A ILE 280 n 280 ILE 280 A PRO 281 n 281 PRO 281 A MET 282 n 282 MET 282 A ARG 283 n 283 ARG 283 A ILE 284 n 284 ILE 284 A THR 285 n 285 THR 285 A VAL 286 n 286 VAL 286 A ILE 287 n 287 ILE 287 A ALA 288 n 288 ALA 288 A ILE 289 n 289 ILE 289 A MET 290 n 290 MET 290 A GLU 291 n 291 GLU 291 A ASP 292 n 292 ASP 292 A LEU 293 n 293 LEU 293 A ASP 294 n 294 ASP 294 A ILE 295 n 295 ILE 295 A LEU 296 n 296 LEU 296 A SER 297 n 297 SER 297 A LYS 298 n 298 LYS 298 A GLY 299 n 299 GLY 299 A LYS 300 n 300 LYS 300 A LYS 301 n 301 LYS 301 A PHE 302 n 302 PHE 302 A LYS 303 n 303 LYS 303 A HIS 304 n 304 HIS 304 A GLY 305 n 305 GLY 305 A ILE 306 n 306 ILE 306 A SER 307 n 307 SER 307 A ILE 308 n 308 ILE 308 A ASP 309 n 309 ASP 309 A ASN 310 n 310 ASN 310 A ALA 311 n 311 ALA 311 A TYR 312 n 312 TYR 312 A LYS 313 n 313 LYS 313 A VAL 314 n 314 VAL 314 A ALA 315 n 315 ALA 315 A GLU 316 n 316 GLU 316 A ASP 317 n 317 ASP 317 A LEU 318 n 318 LEU 318 A LEU 319 n 319 LEU 319 A ARG 320 n 320 ARG 320 A GLU 321 n 321 GLU 321 A LEU 322 n 322 LEU 322 A LEU 323 n 323 LEU 323 A VAL 324 n 324 VAL 324 A ARG 325 n 325 ARG 325 A ASP 326 n 326 ASP 326 A LYS 327 n 327 LYS 327 A ARG 328 n 328 ARG 328 A ARG 329 n 329 ARG 329 A ASN 330 n 330 ASN 330 A VAL 331 n 331 VAL 331 A ARG 332 n 332 ARG 332 A ARG 333 n 333 ARG 333 A ILE 334 n 334 ILE 334 A GLY 335 n 335 GLY 335 A VAL 336 n 336 VAL 336 A LYS 337 n 337 LYS 337 A LEU 338 n 338 LEU 338 A ASP 339 n 339 ASP 339 A ASN 340 n 340 ASN 340 A ILE 341 n 341 ILE 341 A ILE 342 n 342 ILE 342 A ILE 343 n 343 ILE 343 A ASN 344 n 344 ASN 344 A n 345 345 A n 346 346 A n 347 347 A n 348 348 A n 349 349 A n 350 350 A n 351 351 A n 352 352 A n 353 353 A n 354 354 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N GLU 100 A N GLU 100 A O TYR 108 A O TYR 108 A O LEU 109 A O LEU 109 A N ILE 4 A N ILE 4 A N PHE 5 A N PHE 5 A O GLY 144 A O GLY 144 A N VAL 145 A N VAL 145 A O GLY 165 A O GLY 165 A O ALA 44 A O ALA 44 A N VAL 30 A N VAL 30 A N VAL 29 A N VAL 29 A O ILE 72 A O ILE 72 A N SER 242 A N SER 242 A O ILE 341 A O ILE 341 A N THR 256 A N THR 256 A O VAL 331 A O VAL 331 A O GLY 335 A O GLY 335 A N ILE 287 A N ILE 287 A N VAL 286 A N VAL 286 A O LYS 301 A O LYS 301 1 A CG LYS 26 A CG LYS 26 1 Y 1 A CD LYS 26 A CD LYS 26 1 Y 1 A CE LYS 26 A CE LYS 26 1 Y 1 A NZ LYS 26 A NZ LYS 26 1 Y 1 A O GLY 35 A O GLY 35 1 Y 1 A CG LYS 56 A CG LYS 56 1 Y 1 A CD LYS 56 A CD LYS 56 1 Y 1 A CE LYS 56 A CE LYS 56 1 Y 1 A NZ LYS 56 A NZ LYS 56 1 Y 1 A CG LYS 63 A CG LYS 63 1 Y 1 A CD LYS 63 A CD LYS 63 1 Y 1 A CE LYS 63 A CE LYS 63 1 Y 1 A NZ LYS 63 A NZ LYS 63 1 Y 1 A CG GLN 66 A CG GLN 66 1 Y 1 A CD GLN 66 A CD GLN 66 1 Y 1 A OE1 GLN 66 A OE1 GLN 66 1 Y 1 A NE2 GLN 66 A NE2 GLN 66 1 Y 1 A CG GLU 116 A CG GLU 116 1 Y 1 A CD GLU 116 A CD GLU 116 1 Y 1 A OE1 GLU 116 A OE1 GLU 116 1 Y 1 A OE2 GLU 116 A OE2 GLU 116 1 Y 1 A CG ASP 182 A CG ASP 182 1 Y 1 A OD1 ASP 182 A OD1 ASP 182 1 Y 1 A OD2 ASP 182 A OD2 ASP 182 1 Y 1 A OG SER 235 A OG SER 235 1 Y 1 A OG SER 297 A OG SER 297 1 Y 1 A CG LYS 303 A CG LYS 303 1 Y 1 A CD LYS 303 A CD LYS 303 1 Y 1 A CE LYS 303 A CE LYS 303 1 Y 1 A NZ LYS 303 A NZ LYS 303 1 Y 1 A CG ASP 339 A CG ASP 339 1 Y 1 A OD1 ASP 339 A OD1 ASP 339 1 Y 1 A OD2 ASP 339 A OD2 ASP 339 1 Y 1 A ARG 36 A ARG 36 1 Y 1 A THR 37 A THR 37 1 Y 1 A LYS 38 A LYS 38 1 Y 1 A LYS 345 A LYS 345 1 Y 1 A THR 346 A THR 346 1 Y 1 A ASN 347 A ASN 347 1 Y 1 A LEU 348 A LEU 348 1 Y 1 A SER 349 A SER 349 1 Y 1 A ASP 350 A ASP 350 1 Y 1 A PHE 351 A PHE 351 1 Y 1 A PHE 352 A PHE 352 1 Y 1 A ASP 353 A ASP 353 1 Y 1 A ILE 354 A ILE 354 1 Y 1 A TYR 10 31.05 45.66 1 A PHE 11 -25.86 -72.40 1 A PRO 27 -63.28 84.79 1 A SER 34 -172.00 -161.88 1 A SER 40 170.81 115.31 1 A GLU 49 -59.40 -6.90 1 A LEU 53 -67.52 7.00 1 A ARG 77 -119.64 76.26 1 A ASP 105 -146.73 20.71 1 A GLU 116 48.15 26.47 1 A LYS 158 -66.06 1.51 1 A ASN 162 58.34 7.08 1 A LEU 164 -151.08 76.19 1 A VAL 172 -65.76 -77.27 1 A GLU 178 -73.77 23.85 1 A LEU 207 -83.14 35.24 1 A SER 208 -158.93 49.38 1 A LYS 209 -171.49 135.96 1 A LYS 216 -69.71 14.44 1 A ILE 217 -132.39 -46.67 1 A ALA 221 -53.83 -70.02 1 A TYR 234 -105.00 50.26 1 A SER 235 -100.63 79.19 1 A TYR 254 178.91 139.47 1 A ASN 278 -98.35 40.68 1 A GLU 291 -12.71 -44.88 1 A ARG 328 33.20 71.07 1 A ARG 329 -178.18 90.31 PROTEIN_REP.PARAM PROTEIN.TOP WATER_REP.PARAM WATER.TOP 72.9 9.28 19.43 .00 10.26 .00 -19.54 0.2790000 .008 0.2370000 2.80 37.00 1159 11002 11002 10.5 96.6 RANDOM 617472.89 .000000 1 RESTRAINED THROUGHOUT 0 MOLECULAR REPLACEMENT PDB entry 1IM4 Engh & Huber FLAT MODEL 55.8395 .380645 .52 .39 5.00 .62 .48 2.80 37.00 31 2702 0 0 2671 .004 .9 21.1 .70 1.24 1.50 2.14 2.00 2.70 2.00 3.46 2.50 0.4260000 .032 0.3380000 2.98 175 1537 6 10.2 90.6 2.8 37.0 1K1S 11002 11002 0 0 0.0800000 1 20.1 7.1 99.9 0.5010000 2.8 2.9 4.7 1126 7.1 100.0 phasing AMoRE refinement CNS 1.0 data reduction DENZO data scaling SCALEPACK Crystal Structure of DinB from Sulfolobus solfataricus 1 N N 2 N N A TYR 10 A TYR 10 HELX_P A LEU 19 A LEU 19 1 1 10 A ASN 20 A ASN 20 HELX_P A LYS 24 A LYS 24 5 2 5 A ASN 47 A ASN 47 HELX_P A LYS 52 A LYS 52 1 3 6 A PRO 60 A PRO 60 HELX_P A GLN 66 A GLN 66 1 4 7 A ARG 77 A ARG 77 HELX_P A LYS 94 A LYS 94 1 5 18 A ASN 121 A ASN 121 HELX_P A LYS 138 A LYS 138 1 6 18 A ASN 148 A ASN 148 HELX_P A LYS 158 A LYS 158 1 7 11 A GLU 171 A GLU 171 HELX_P A GLU 178 A GLU 178 1 8 8 A ASP 180 A ASP 180 HELX_P A ILE 187 A ILE 187 5 9 8 A GLY 188 A GLY 188 HELX_P A LEU 198 A LEU 198 1 10 11 A LYS 202 A LYS 202 HELX_P A LYS 209 A LYS 209 5 11 8 A ASN 210 A ASN 210 HELX_P A GLY 219 A GLY 219 1 12 10 A GLY 219 A GLY 219 HELX_P A ALA 230 A ALA 230 1 13 12 A ASP 258 A ASP 258 HELX_P A LYS 276 A LYS 276 1 14 19 A SER 307 A SER 307 HELX_P A VAL 324 A VAL 324 1 15 18 TRANSCRIPTION mixed a/b structure, 4-stranded antiparallel b-sheet, TRANSCRIPTION A LYS 160 A LYS 160 1 A PRO 161 A PRO 161 0.25 DPO41_SULSO UNP 1 1 P96022 MIVIFVDFDYFFAQVEEVLNPQYKGKPLVVCVYSGRTKTSGAVATANYEARKLGVKAGMPIIKAMQIAPSAIYVPMRKPI YEAFSNRIMNLLNKHADKIEVASIDEAYLDVTNKVEGNFENGIELARKIKQEILEKEKITVTVGVAPNKILAKIIADKSK PNGLGVIRPTEVQDFLNELDIDEIPGIGSVLARRLNELGIQKLRDILSKNYNELEKITGKAKALYLLKLAQNKYSEPVEN KSKIPHGRYLTLPYNTRDVKVILPYLKKAINEAYNKVNGIPMRITVIAIMEDLDILSKGKKFKHGISIDNAYKVAEDLLR ELLVRDKRRNVRRIGVKLDNIIINKTNLSDFFDI 1 354 1K1S 1 354 P96022 A 1 1 354 1 CYS engineered mutation SER 31 1K1S A P96022 UNP 31 31 5 3 2 4 anti-parallel anti-parallel anti-parallel parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel A LYS 98 A LYS 98 A SER 103 A SER 103 A GLU 106 A GLU 106 A ASP 110 A ASP 110 A VAL 3 A VAL 3 A PHE 8 A PHE 8 A VAL 141 A VAL 141 A ALA 146 A ALA 146 A LEU 164 A LEU 164 A VAL 166 A VAL 166 A GLY 41 A GLY 41 A ALA 46 A ALA 46 A LEU 28 A LEU 28 A TYR 33 A TYR 33 A ILE 72 A ILE 72 A VAL 74 A VAL 74 A LYS 241 A LYS 241 A SER 242 A SER 242 A ILE 341 A ILE 341 A ILE 342 A ILE 342 A HIS 246 A HIS 246 A THR 256 A THR 256 A VAL 331 A VAL 331 A ASP 339 A ASP 339 A ARG 283 A ARG 283 A MET 290 A MET 290 A ILE 295 A ILE 295 A LYS 301 A LYS 301 171 P 62