1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Kusunoki, H.
Motohashi, H.
Katsuoka, F.
Morohashi, A.
Yamamoto, M.
Tanaka, T.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Nat.Struct.Biol.
NSBIEW
2024
1072-8368
9
252
256
10.1038/nsb771
11875518
Solution structure of the DNA-binding domain of MafG.
2002
10.2210/pdb1k1v/pdb
pdb_00001k1v
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
1
1.0
4962.735
MafG
Residues 24-64
1
man
polymer
Transcription factor MafG
no
no
LTDEELVTMSVRELNQHLRGLSKEEIIQLKQRRRTLKNRGY
LTDEELVTMSVRELNQHLRGLSKEEIIQLKQRRRTLKNRGY
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
house mouse
Mus
Escherichia
sample
10090
Mus musculus
562
Escherichia coli
BL21-CodonPlus(DE3)-RIL
PLASMID
pET15b
database_2
pdbx_struct_assembly
pdbx_struct_oper_list
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
1
0
2002-04-10
1
1
2008-04-27
1
2
2011-07-13
1
3
2022-02-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
RCSB
Y
PDBJ
2001-09-25
REL
REL
The structure was determined using triple-resonance NMR spectroscopy on 13C/15N or 15N labeled MafG(1-76).
structures with the lowest energy
50
20
2D NOESY
3D_13C-separated_NOESY
3D_15N-separated_NOESY
HNHA
6.7
ambient
298
K
The structures are based on a total of 843 restraints: 817 NOE-derived distance restraints and 26 dihedral angle restraints.
simulated annealing
1
lowest energy
1.5-2.0mM MafG(1-76); 20mM Sodium phosphate, 10mM Dithiothreitol-d10; 90% H2O, 10% D2O
90% H2O/10% D2O
Brunger, A.T.
structure solution
X-PLOR
3.851
Brunger, A.T.
refinement
X-PLOR
3.851
500
Varian
UNITY INOVA
800
Bruker
AVANCE DRX
LEU
24
n
1
LEU
24
A
THR
25
n
2
THR
25
A
ASP
26
n
3
ASP
26
A
GLU
27
n
4
GLU
27
A
GLU
28
n
5
GLU
28
A
LEU
29
n
6
LEU
29
A
VAL
30
n
7
VAL
30
A
THR
31
n
8
THR
31
A
MET
32
n
9
MET
32
A
SER
33
n
10
SER
33
A
VAL
34
n
11
VAL
34
A
ARG
35
n
12
ARG
35
A
GLU
36
n
13
GLU
36
A
LEU
37
n
14
LEU
37
A
ASN
38
n
15
ASN
38
A
GLN
39
n
16
GLN
39
A
HIS
40
n
17
HIS
40
A
LEU
41
n
18
LEU
41
A
ARG
42
n
19
ARG
42
A
GLY
43
n
20
GLY
43
A
LEU
44
n
21
LEU
44
A
SER
45
n
22
SER
45
A
LYS
46
n
23
LYS
46
A
GLU
47
n
24
GLU
47
A
GLU
48
n
25
GLU
48
A
ILE
49
n
26
ILE
49
A
ILE
50
n
27
ILE
50
A
GLN
51
n
28
GLN
51
A
LEU
52
n
29
LEU
52
A
LYS
53
n
30
LYS
53
A
GLN
54
n
31
GLN
54
A
ARG
55
n
32
ARG
55
A
ARG
56
n
33
ARG
56
A
ARG
57
n
34
ARG
57
A
THR
58
n
35
THR
58
A
LEU
59
n
36
LEU
59
A
LYS
60
n
37
LYS
60
A
ASN
61
n
38
ASN
61
A
ARG
62
n
39
ARG
62
A
GLY
63
n
40
GLY
63
A
TYR
64
n
41
TYR
64
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
A
O
H
LEU
LEU
41
44
1.57
4
A
A
O
H
VAL
ASN
34
38
1.54
5
A
A
O
H
LEU
LEU
41
44
1.57
5
A
A
H
OE2
THR
GLU
25
28
1.60
6
A
A
O
H
VAL
ASN
34
38
1.56
7
A
A
O
H
SER
LEU
33
37
1.55
7
A
A
O
H
VAL
ASN
34
38
1.56
9
A
A
O
H
VAL
ASN
34
38
1.58
9
A
A
O
H
SER
LEU
33
37
1.58
11
A
A
O
HG1
GLU
THR
27
31
1.58
12
A
A
O
H
LEU
LEU
41
44
1.57
13
A
A
O
H
LEU
GLY
41
43
1.58
14
A
A
O
H
VAL
ASN
34
38
1.56
14
A
A
O
H
SER
LEU
33
37
1.56
14
A
A
O
H
THR
ARG
58
62
1.57
14
A
A
O
H
LEU
LEU
41
44
1.60
17
A
A
O
H
VAL
ASN
34
38
1.56
17
A
A
O
H
LEU
LEU
41
44
1.57
19
A
A
O
H
LEU
LEU
41
44
1.57
20
A
A
O
H
VAL
ASN
34
38
1.57
1
A
ARG
35
0.292
SIDE CHAIN
1
A
ARG
55
0.309
SIDE CHAIN
1
A
ARG
56
0.319
SIDE CHAIN
1
A
ARG
57
0.318
SIDE CHAIN
1
A
ARG
62
0.142
SIDE CHAIN
2
A
ARG
35
0.221
SIDE CHAIN
2
A
ARG
42
0.167
SIDE CHAIN
2
A
ARG
55
0.309
SIDE CHAIN
2
A
ARG
57
0.318
SIDE CHAIN
2
A
ARG
62
0.319
SIDE CHAIN
3
A
ARG
35
0.286
SIDE CHAIN
3
A
ARG
55
0.206
SIDE CHAIN
3
A
ARG
56
0.278
SIDE CHAIN
3
A
ARG
57
0.096
SIDE CHAIN
3
A
ARG
62
0.317
SIDE CHAIN
4
A
ARG
35
0.299
SIDE CHAIN
4
A
ARG
42
0.187
SIDE CHAIN
4
A
ARG
55
0.091
SIDE CHAIN
4
A
ARG
56
0.162
SIDE CHAIN
4
A
ARG
57
0.318
SIDE CHAIN
4
A
ARG
62
0.292
SIDE CHAIN
5
A
ARG
35
0.203
SIDE CHAIN
5
A
ARG
42
0.120
SIDE CHAIN
5
A
ARG
55
0.280
SIDE CHAIN
5
A
ARG
56
0.276
SIDE CHAIN
5
A
ARG
57
0.312
SIDE CHAIN
5
A
ARG
62
0.178
SIDE CHAIN
6
A
ARG
35
0.319
SIDE CHAIN
6
A
ARG
42
0.239
SIDE CHAIN
6
A
ARG
56
0.220
SIDE CHAIN
6
A
ARG
57
0.294
SIDE CHAIN
6
A
ARG
62
0.314
SIDE CHAIN
7
A
ARG
35
0.205
SIDE CHAIN
7
A
ARG
42
0.248
SIDE CHAIN
7
A
ARG
55
0.244
SIDE CHAIN
7
A
ARG
56
0.267
SIDE CHAIN
7
A
ARG
57
0.315
SIDE CHAIN
7
A
ARG
62
0.197
SIDE CHAIN
8
A
ARG
35
0.213
SIDE CHAIN
8
A
ARG
42
0.317
SIDE CHAIN
8
A
ARG
55
0.156
SIDE CHAIN
8
A
ARG
56
0.277
SIDE CHAIN
8
A
ARG
62
0.317
SIDE CHAIN
9
A
ARG
35
0.212
SIDE CHAIN
9
A
ARG
42
0.266
SIDE CHAIN
9
A
ARG
55
0.311
SIDE CHAIN
9
A
ARG
56
0.164
SIDE CHAIN
9
A
ARG
62
0.093
SIDE CHAIN
10
A
ARG
35
0.229
SIDE CHAIN
10
A
ARG
42
0.080
SIDE CHAIN
10
A
ARG
55
0.319
SIDE CHAIN
10
A
ARG
56
0.310
SIDE CHAIN
10
A
ARG
57
0.319
SIDE CHAIN
10
A
ARG
62
0.111
SIDE CHAIN
11
A
ARG
35
0.249
SIDE CHAIN
11
A
ARG
42
0.282
SIDE CHAIN
11
A
ARG
55
0.142
SIDE CHAIN
11
A
ARG
56
0.306
SIDE CHAIN
11
A
ARG
57
0.281
SIDE CHAIN
12
A
ARG
42
0.306
SIDE CHAIN
12
A
ARG
55
0.089
SIDE CHAIN
12
A
ARG
56
0.157
SIDE CHAIN
12
A
ARG
57
0.084
SIDE CHAIN
12
A
ARG
62
0.168
SIDE CHAIN
13
A
ARG
35
0.237
SIDE CHAIN
13
A
ARG
42
0.168
SIDE CHAIN
13
A
ARG
55
0.178
SIDE CHAIN
13
A
ARG
62
0.293
SIDE CHAIN
14
A
ARG
35
0.273
SIDE CHAIN
14
A
ARG
42
0.312
SIDE CHAIN
14
A
ARG
55
0.308
SIDE CHAIN
14
A
ARG
56
0.248
SIDE CHAIN
14
A
ARG
57
0.315
SIDE CHAIN
14
A
ARG
62
0.286
SIDE CHAIN
15
A
ARG
35
0.177
SIDE CHAIN
15
A
ARG
42
0.210
SIDE CHAIN
15
A
ARG
55
0.174
SIDE CHAIN
15
A
ARG
56
0.198
SIDE CHAIN
15
A
ARG
57
0.169
SIDE CHAIN
15
A
ARG
62
0.245
SIDE CHAIN
16
A
ARG
35
0.315
SIDE CHAIN
16
A
ARG
42
0.315
SIDE CHAIN
16
A
ARG
55
0.208
SIDE CHAIN
16
A
ARG
56
0.222
SIDE CHAIN
16
A
ARG
57
0.187
SIDE CHAIN
16
A
ARG
62
0.319
SIDE CHAIN
17
A
ARG
35
0.136
SIDE CHAIN
17
A
ARG
42
0.252
SIDE CHAIN
17
A
ARG
55
0.313
SIDE CHAIN
17
A
ARG
56
0.266
SIDE CHAIN
17
A
ARG
57
0.287
SIDE CHAIN
17
A
ARG
62
0.260
SIDE CHAIN
18
A
ARG
35
0.314
SIDE CHAIN
18
A
ARG
42
0.186
SIDE CHAIN
18
A
ARG
55
0.319
SIDE CHAIN
18
A
ARG
56
0.200
SIDE CHAIN
18
A
ARG
57
0.320
SIDE CHAIN
18
A
ARG
62
0.317
SIDE CHAIN
19
A
ARG
42
0.242
SIDE CHAIN
19
A
ARG
55
0.091
SIDE CHAIN
19
A
ARG
56
0.168
SIDE CHAIN
19
A
ARG
57
0.219
SIDE CHAIN
19
A
ARG
62
0.237
SIDE CHAIN
20
A
ARG
35
0.275
SIDE CHAIN
20
A
ARG
42
0.152
SIDE CHAIN
20
A
ARG
55
0.226
SIDE CHAIN
20
A
ARG
56
0.263
SIDE CHAIN
20
A
ARG
57
0.234
SIDE CHAIN
20
A
ARG
62
0.317
SIDE CHAIN
1
A
A
CG
ND1
HIS
HIS
40
40
-0.120
0.015
1.369
1.249
N
2
A
A
CG
ND1
HIS
HIS
40
40
-0.121
0.015
1.369
1.248
N
3
A
A
CG
ND1
HIS
HIS
40
40
-0.123
0.015
1.369
1.246
N
4
A
A
CG
ND1
HIS
HIS
40
40
-0.120
0.015
1.369
1.249
N
5
A
A
CG
ND1
HIS
HIS
40
40
-0.120
0.015
1.369
1.249
N
6
A
A
CG
ND1
HIS
HIS
40
40
-0.120
0.015
1.369
1.249
N
7
A
A
CG
ND1
HIS
HIS
40
40
-0.121
0.015
1.369
1.248
N
8
A
A
CG
ND1
HIS
HIS
40
40
-0.121
0.015
1.369
1.248
N
9
A
A
CG
ND1
HIS
HIS
40
40
-0.121
0.015
1.369
1.248
N
10
A
A
CG
ND1
HIS
HIS
40
40
-0.120
0.015
1.369
1.249
N
11
A
A
CG
ND1
HIS
HIS
40
40
-0.120
0.015
1.369
1.249
N
12
A
A
CG
ND1
HIS
HIS
40
40
-0.120
0.015
1.369
1.249
N
13
A
A
CG
ND1
HIS
HIS
40
40
-0.121
0.015
1.369
1.248
N
14
A
A
CG
ND1
HIS
HIS
40
40
-0.120
0.015
1.369
1.249
N
15
A
A
CG
ND1
HIS
HIS
40
40
-0.120
0.015
1.369
1.249
N
16
A
A
CG
ND1
HIS
HIS
40
40
-0.121
0.015
1.369
1.248
N
17
A
A
CG
ND1
HIS
HIS
40
40
-0.121
0.015
1.369
1.248
N
18
A
A
CG
ND1
HIS
HIS
40
40
-0.120
0.015
1.369
1.249
N
19
A
A
CG
ND1
HIS
HIS
40
40
-0.121
0.015
1.369
1.248
N
20
A
A
CG
ND1
HIS
HIS
40
40
-0.120
0.015
1.369
1.249
N
1
A
ARG
42
-45.96
95.62
1
A
SER
45
-47.87
165.01
1
A
GLN
54
-102.56
-64.51
1
A
ARG
62
-53.37
176.53
2
A
THR
25
-59.27
178.18
2
A
SER
33
-47.51
-96.16
2
A
VAL
34
-138.04
-30.96
2
A
ARG
42
-58.61
86.13
2
A
LYS
53
-56.50
-6.46
2
A
GLN
54
-72.02
-71.65
2
A
ARG
62
-51.17
171.72
3
A
SER
33
-63.87
-145.16
3
A
ARG
42
-59.46
84.37
3
A
GLN
54
-88.09
-75.09
3
A
ARG
62
-52.72
176.59
4
A
THR
25
-55.81
179.87
4
A
SER
33
-46.99
162.78
4
A
LEU
41
-47.13
-12.14
4
A
ARG
42
-70.86
31.81
4
A
GLN
54
-98.88
-69.80
4
A
LYS
60
-49.14
-17.97
4
A
ARG
62
-62.45
-169.64
5
A
THR
25
-63.64
-178.40
5
A
SER
33
-46.65
-92.78
5
A
VAL
34
-145.89
-30.40
5
A
ARG
42
-55.51
-0.27
5
A
ARG
62
-59.51
178.61
6
A
SER
33
-47.64
164.62
6
A
ARG
42
-69.28
27.96
6
A
GLN
54
-93.04
-68.64
6
A
ASN
61
-90.13
-62.02
6
A
ARG
62
-52.40
176.96
7
A
THR
25
-52.21
171.31
7
A
SER
33
-51.04
171.20
7
A
ARG
42
-62.85
77.89
7
A
GLN
54
-76.03
-85.18
7
A
ARG
62
-48.81
169.50
8
A
SER
33
-49.23
-95.52
8
A
VAL
34
-147.06
-27.49
8
A
ARG
42
-64.20
76.68
8
A
GLN
54
-96.89
-77.07
8
A
ARG
62
-62.83
-160.90
9
A
THR
25
-57.73
-175.03
9
A
SER
33
-54.15
178.47
9
A
ARG
42
-51.21
90.10
9
A
ARG
62
-57.07
-175.86
10
A
LEU
29
-39.68
-29.77
10
A
SER
33
-41.34
154.59
10
A
VAL
34
-39.87
-38.29
10
A
ARG
42
-69.90
27.70
10
A
GLN
54
-74.22
-73.13
10
A
ASN
61
-91.94
-62.20
10
A
ARG
62
-51.61
173.99
11
A
THR
25
-58.06
-174.03
11
A
SER
33
-64.72
-150.63
11
A
ARG
42
-49.94
91.31
11
A
SER
45
-56.18
-178.24
11
A
GLN
54
-81.33
-75.14
12
A
SER
33
-66.05
-177.47
12
A
ARG
42
-52.10
88.77
12
A
LYS
53
-64.74
4.87
12
A
GLN
54
-99.21
-89.16
12
A
ASN
61
-91.55
-67.01
12
A
ARG
62
-51.11
173.22
13
A
SER
33
-49.00
-93.27
13
A
ARG
42
-70.34
39.76
13
A
ARG
62
-137.09
-111.24
14
A
SER
33
-55.39
-178.76
14
A
ARG
42
-41.78
94.52
14
A
ARG
62
-76.39
-147.54
15
A
THR
25
-80.38
-157.36
15
A
SER
33
-61.69
-162.86
15
A
ARG
42
-63.61
78.26
15
A
LYS
53
-61.17
5.54
15
A
GLN
54
-100.32
-76.34
15
A
ARG
62
-65.94
-149.10
16
A
SER
33
-48.94
-94.27
16
A
VAL
34
-140.58
-31.59
16
A
ARG
42
-50.86
90.68
16
A
SER
45
-60.36
-171.44
16
A
GLN
54
-86.46
-79.56
16
A
ARG
62
-53.36
178.21
17
A
THR
25
-59.54
-169.47
17
A
GLU
27
-52.67
-8.56
17
A
SER
33
-57.86
-174.85
17
A
LEU
41
-46.26
-18.90
17
A
ARG
62
-51.06
171.15
18
A
THR
25
-46.97
161.35
18
A
ARG
42
-62.20
6.95
18
A
ARG
62
-56.63
179.59
19
A
THR
25
-41.97
152.81
19
A
SER
33
-53.01
176.25
19
A
ARG
42
-52.82
88.59
19
A
GLN
54
-104.35
-62.35
20
A
LEU
29
-37.41
-24.85
20
A
SER
33
-77.31
-165.55
20
A
LEU
41
-66.55
5.63
20
A
ARG
42
-44.90
99.24
20
A
ARG
62
-57.43
-171.77
Solution Structure of the DNA-Binding Domain of MafG
1
N
N
A
ASP
26
A
ASP
3
HELX_P
A
THR
31
A
THR
8
1
1
6
A
VAL
34
A
VAL
11
HELX_P
A
LEU
41
A
LEU
18
1
2
8
A
LYS
46
A
LYS
23
HELX_P
A
ASN
61
A
ASN
38
1
3
16
DNA BINDING PROTEIN
Maf, transcription factor, DNA-binding domain, DNA BINDING PROTEIN
MAFG_MOUSE
UNP
1
24
O54790
LTDEELVTMSVRELNQHLRGLSKEEIIQLKQRRRTLKNRGY
24
64
1K1V
24
64
O54790
A
1
1
41