0.018971
0.000000
0.000000
0.000000
0.013772
0.000000
0.000000
0.000000
0.011741
0.00000
0.00000
0.00000
Wang, S.
Mura, C.
Sawaya, M.R.
Cascio, D.
Eisenberg, D.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
52.712
72.612
85.175
C2 H4 O2
60.052
ACETIC ACID
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Ni 2
58.693
NICKEL (II) ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
C
N
2
N
O
N
3
N
O
N
4
N
C
N
5
N
H
N
6
N
H
N
7
N
H
N
8
N
H
N
9
N
N
N
10
S
C
N
11
N
C
N
12
N
O
N
13
N
C
N
14
N
O
N
15
N
H
N
16
N
H
N
17
N
H
N
18
N
H
N
19
N
H
N
20
N
H
N
21
N
H
N
22
N
N
N
23
S
C
N
24
N
C
N
25
N
O
N
26
N
C
N
27
N
C
N
28
N
C
N
29
N
N
N
30
N
C
N
31
N
N
N
32
N
N
N
33
N
O
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
N
N
50
S
C
N
51
N
C
N
52
N
O
N
53
N
C
N
54
N
C
N
55
N
O
N
56
N
N
N
57
N
O
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
N
N
67
S
C
N
68
N
C
N
69
N
O
N
70
N
C
N
71
N
C
N
72
N
O
N
73
N
O
N
74
N
O
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
N
N
83
S
C
N
84
N
C
N
85
N
O
N
86
N
C
N
87
N
C
N
88
N
C
N
89
N
O
N
90
N
O
N
91
N
O
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
N
N
102
N
C
N
103
N
C
N
104
N
O
N
105
N
O
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
C
N
112
N
O
N
113
N
C
N
114
N
O
N
115
N
C
N
116
N
O
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
N
N
126
S
C
N
127
N
C
N
128
N
O
N
129
N
C
Y
130
N
C
Y
131
N
N
Y
132
N
C
Y
133
N
C
Y
134
N
N
N
135
N
O
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
O
N
147
N
H
N
148
N
H
N
149
N
N
N
150
S
C
N
151
N
C
N
152
N
O
N
153
S
C
N
154
N
C
N
155
N
C
N
156
N
C
N
157
N
O
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
N
N
172
S
C
N
173
N
C
N
174
N
O
N
175
N
C
N
176
N
C
N
177
N
C
N
178
N
C
N
179
N
O
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
N
N
194
S
C
N
195
N
C
N
196
N
O
N
197
N
C
N
198
N
C
N
199
N
C
N
200
N
C
N
201
N
N
N
202
N
O
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
N
N
219
S
C
N
220
N
C
N
221
N
O
N
222
N
C
N
223
N
C
N
224
N
S
N
225
N
C
N
226
N
O
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
NI
N
239
N
N
N
240
S
C
N
241
N
C
N
242
N
O
N
243
N
C
Y
244
N
C
Y
245
N
C
Y
246
N
C
Y
247
N
C
Y
248
N
C
Y
249
N
C
N
250
N
O
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
N
N
263
S
C
N
264
N
C
N
265
N
O
N
266
N
C
N
267
N
C
N
268
N
C
N
269
N
O
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
N
N
280
S
C
N
281
N
C
N
282
N
O
N
283
N
C
N
284
N
O
N
285
N
O
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
S
N
294
N
O
N
295
N
O
N
296
N
O
N
297
N
O
N
298
N
N
N
299
S
C
N
300
N
C
N
301
N
O
N
302
R
C
N
303
N
O
N
304
N
C
N
305
N
O
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
N
N
316
S
C
N
317
N
C
N
318
N
O
N
319
N
C
Y
320
N
C
Y
321
N
C
Y
322
N
C
Y
323
N
N
Y
324
N
C
Y
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
N
329
N
O
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
N
N
343
S
C
N
344
N
C
N
345
N
O
N
346
N
C
Y
347
N
C
Y
348
N
C
Y
349
N
C
Y
350
N
C
Y
351
N
C
Y
352
N
C
N
353
N
O
N
354
N
O
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
N
N
367
S
C
N
368
N
C
N
369
N
O
N
370
N
C
N
371
N
C
N
372
N
C
N
373
N
O
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
doub
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
doub
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
doub
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
doub
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
doub
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
doub
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
doub
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
doub
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
doub
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
doub
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
doub
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
Y
128
N
sing
Y
129
N
doub
Y
130
N
doub
N
131
N
sing
Y
132
N
sing
N
133
N
sing
Y
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
doub
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
doub
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
doub
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
doub
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
Y
236
N
doub
Y
237
N
sing
Y
238
N
sing
N
239
N
sing
Y
240
N
doub
N
241
N
sing
Y
242
N
doub
N
243
N
sing
Y
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
doub
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
doub
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
doub
N
279
N
doub
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
doub
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
doub
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
Y
309
N
doub
Y
310
N
sing
Y
311
N
sing
N
312
N
sing
Y
313
N
doub
Y
314
N
sing
Y
315
N
sing
N
316
N
sing
Y
317
N
sing
Y
318
N
doub
N
319
N
sing
Y
320
N
doub
N
321
N
sing
Y
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
doub
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
Y
337
N
doub
Y
338
N
sing
Y
339
N
sing
N
340
N
sing
Y
341
N
doub
N
342
N
sing
Y
343
N
doub
N
344
N
sing
Y
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
doub
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
58
571
578
10.1107/S0907444902001191
11914479
Structure of a Nudix protein from Pyrobaculum aerophilum reveals a dimer with two intersubunit beta-sheets.
2002
10.2210/pdb1k2e/pdb
pdb_00001k2e
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
110
1
mirrors
CCD
2001-03-12
ADSC QUANTUM 4
SINGLE WAVELENGTH
M
x-ray
1
1.1
1.0
X8C
NSLS
1.1
SYNCHROTRON
NSLS BEAMLINE X8C
17813.570
NUDIX HOMOLOG
M16L
2
man
polymer
96.063
SULFATE ION
2
syn
non-polymer
58.693
NICKEL (II) ION
2
syn
non-polymer
92.094
GLYCEROL
6
syn
non-polymer
60.052
ACETIC ACID
2
syn
non-polymer
18.015
water
243
nat
water
no
no
MIVTSGVLVENGKVLLVKHKRLGVYIYPGGHVEHNETPIEAVKREFEEETGIVVEPIGFTYGIIDENAVERPMPLVILEE
VVKYPEETHIHFDLIYLVKRVGGDLKNGEWIDVREIDRIETFPNVRKVVSLALSTLYRLGKISKLAAALEHHHHHH
MIVTSGVLVENGKVLLVKHKRLGVYIYPGGHVEHNETPIEAVKREFEEETGIVVEPIGFTYGIIDENAVERPMPLVILEE
VVKYPEETHIHFDLIYLVKRVGGDLKNGEWIDVREIDRIETFPNVRKVVSLALSTLYRLGKISKLAAALEHHHHHH
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Pyrobaculum
Escherichia
Escherichia coli
sample
13773
Pyrobaculum aerophilum
469008
Escherichia coli BL21(DE3)
BL21(DE3)
pET-22b(+)
pET-22b_mutt
1
2.29
46.21
VAPOR DIFFUSION, HANGING DROP
4.8
PEG 4000, ammonium sulfate, sodium acetate, isopropanol, pH 4.8, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Version format compliance
Non-polymer description
Version format compliance
Data collection
Database references
Derived calculations
Refinement description
1
0
2002-04-03
1
1
2008-04-27
1
2
2011-07-13
1
3
2023-08-16
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_struct_conn.pdbx_dist_value
_struct_conn.ptnr2_auth_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
1K26 contains the same protein, solved by SAD on
iridium derivative data at 1.85 A resolution.
1JRK contains the same protein crystallized as a tetramer in the asymmetric unit.
RCSB
Y
RCSB
2001-09-26
REL
REL
SO4
SULFATE ION
NI
NICKEL (II) ION
GOL
GLYCEROL
ACY
ACETIC ACID
HOH
water
1K26
1K26, same protein solved by SAD with iridium derivative data.
PDB
experimental model
SO4
201
2
SO4
SO4
201
A
NI2
211
3
NI
NI
211
A
CRY
203
4
GOL
GOL
203
A
CRY
204
4
GOL
GOL
204
A
CRY
206
4
GOL
GOL
206
A
ACY
210
5
ACY
ACY
210
A
SO4
202
2
SO4
SO4
202
B
NI2
212
3
NI
NI
212
B
CRY
205
4
GOL
GOL
205
B
CRY
207
4
GOL
GOL
207
B
CRY
208
4
GOL
GOL
208
B
ACY
209
5
ACY
ACY
209
B
TIP
301
6
HOH
HOH
301
A
TIP
302
6
HOH
HOH
302
A
TIP
303
6
HOH
HOH
303
A
TIP
305
6
HOH
HOH
305
A
TIP
307
6
HOH
HOH
307
A
TIP
308
6
HOH
HOH
308
A
TIP
309
6
HOH
HOH
309
A
TIP
310
6
HOH
HOH
310
A
TIP
316
6
HOH
HOH
316
A
TIP
318
6
HOH
HOH
318
A
TIP
320
6
HOH
HOH
320
A
TIP
321
6
HOH
HOH
321
A
TIP
322
6
HOH
HOH
322
A
TIP
324
6
HOH
HOH
324
A
TIP
325
6
HOH
HOH
325
A
TIP
326
6
HOH
HOH
326
A
TIP
328
6
HOH
HOH
328
A
TIP
329
6
HOH
HOH
329
A
TIP
330
6
HOH
HOH
330
A
TIP
331
6
HOH
HOH
331
A
TIP
333
6
HOH
HOH
333
A
TIP
334
6
HOH
HOH
334
A
TIP
335
6
HOH
HOH
335
A
TIP
336
6
HOH
HOH
336
A
TIP
337
6
HOH
HOH
337
A
TIP
338
6
HOH
HOH
338
A
TIP
340
6
HOH
HOH
340
A
TIP
341
6
HOH
HOH
341
A
TIP
344
6
HOH
HOH
344
A
TIP
346
6
HOH
HOH
346
A
TIP
348
6
HOH
HOH
348
A
TIP
354
6
HOH
HOH
354
A
TIP
355
6
HOH
HOH
355
A
TIP
356
6
HOH
HOH
356
A
TIP
357
6
HOH
HOH
357
A
TIP
359
6
HOH
HOH
359
A
TIP
360
6
HOH
HOH
360
A
TIP
361
6
HOH
HOH
361
A
TIP
364
6
HOH
HOH
364
A
TIP
367
6
HOH
HOH
367
A
TIP
368
6
HOH
HOH
368
A
TIP
373
6
HOH
HOH
373
A
TIP
375
6
HOH
HOH
375
A
TIP
376
6
HOH
HOH
376
A
TIP
378
6
HOH
HOH
378
A
TIP
380
6
HOH
HOH
380
A
TIP
382
6
HOH
HOH
382
A
TIP
383
6
HOH
HOH
383
A
TIP
384
6
HOH
HOH
384
A
TIP
385
6
HOH
HOH
385
A
TIP
388
6
HOH
HOH
388
A
TIP
393
6
HOH
HOH
393
A
TIP
394
6
HOH
HOH
394
A
TIP
400
6
HOH
HOH
400
A
TIP
401
6
HOH
HOH
401
A
TIP
402
6
HOH
HOH
402
A
TIP
403
6
HOH
HOH
403
A
TIP
406
6
HOH
HOH
406
A
TIP
407
6
HOH
HOH
407
A
TIP
408
6
HOH
HOH
408
A
TIP
409
6
HOH
HOH
409
A
TIP
410
6
HOH
HOH
410
A
TIP
411
6
HOH
HOH
411
A
TIP
412
6
HOH
HOH
412
A
TIP
413
6
HOH
HOH
413
A
TIP
414
6
HOH
HOH
414
A
TIP
416
6
HOH
HOH
416
A
TIP
417
6
HOH
HOH
417
A
TIP
418
6
HOH
HOH
418
A
TIP
419
6
HOH
HOH
419
A
TIP
421
6
HOH
HOH
421
A
TIP
422
6
HOH
HOH
422
A
TIP
423
6
HOH
HOH
423
A
TIP
425
6
HOH
HOH
425
A
TIP
426
6
HOH
HOH
426
A
TIP
428
6
HOH
HOH
428
A
TIP
429
6
HOH
HOH
429
A
TIP
430
6
HOH
HOH
430
A
TIP
431
6
HOH
HOH
431
A
TIP
432
6
HOH
HOH
432
A
TIP
433
6
HOH
HOH
433
A
TIP
437
6
HOH
HOH
437
A
TIP
438
6
HOH
HOH
438
A
TIP
439
6
HOH
HOH
439
A
TIP
440
6
HOH
HOH
440
A
TIP
441
6
HOH
HOH
441
A
TIP
443
6
HOH
HOH
443
A
TIP
444
6
HOH
HOH
444
A
TIP
445
6
HOH
HOH
445
A
TIP
446
6
HOH
HOH
446
A
TIP
449
6
HOH
HOH
449
A
TIP
452
6
HOH
HOH
452
A
TIP
453
6
HOH
HOH
453
A
TIP
455
6
HOH
HOH
455
A
TIP
456
6
HOH
HOH
456
A
TIP
457
6
HOH
HOH
457
A
TIP
458
6
HOH
HOH
458
A
TIP
459
6
HOH
HOH
459
A
TIP
462
6
HOH
HOH
462
A
TIP
463
6
HOH
HOH
463
A
TIP
464
6
HOH
HOH
464
A
TIP
465
6
HOH
HOH
465
A
TIP
468
6
HOH
HOH
468
A
TIP
470
6
HOH
HOH
470
A
TIP
471
6
HOH
HOH
471
A
TIP
472
6
HOH
HOH
472
A
TIP
474
6
HOH
HOH
474
A
TIP
475
6
HOH
HOH
475
A
TIP
477
6
HOH
HOH
477
A
TIP
478
6
HOH
HOH
478
A
TIP
479
6
HOH
HOH
479
A
TIP
480
6
HOH
HOH
480
A
TIP
481
6
HOH
HOH
481
A
TIP
485
6
HOH
HOH
485
A
TIP
486
6
HOH
HOH
486
A
TIP
487
6
HOH
HOH
487
A
TIP
488
6
HOH
HOH
488
A
TIP
492
6
HOH
HOH
492
A
TIP
495
6
HOH
HOH
495
A
TIP
497
6
HOH
HOH
497
A
TIP
498
6
HOH
HOH
498
A
TIP
500
6
HOH
HOH
500
A
TIP
501
6
HOH
HOH
501
A
TIP
503
6
HOH
HOH
503
A
TIP
504
6
HOH
HOH
504
A
TIP
509
6
HOH
HOH
509
A
TIP
510
6
HOH
HOH
510
A
TIP
511
6
HOH
HOH
511
A
TIP
512
6
HOH
HOH
512
A
TIP
515
6
HOH
HOH
515
A
TIP
518
6
HOH
HOH
518
A
TIP
519
6
HOH
HOH
519
A
TIP
520
6
HOH
HOH
520
A
TIP
521
6
HOH
HOH
521
A
TIP
525
6
HOH
HOH
525
A
TIP
526
6
HOH
HOH
526
A
TIP
527
6
HOH
HOH
527
A
TIP
528
6
HOH
HOH
528
A
TIP
531
6
HOH
HOH
531
A
TIP
532
6
HOH
HOH
532
A
TIP
533
6
HOH
HOH
533
A
TIP
538
6
HOH
HOH
538
A
TIP
542
6
HOH
HOH
542
A
TIP
304
6
HOH
HOH
304
B
TIP
306
6
HOH
HOH
306
B
TIP
311
6
HOH
HOH
311
B
TIP
312
6
HOH
HOH
312
B
TIP
313
6
HOH
HOH
313
B
TIP
314
6
HOH
HOH
314
B
TIP
315
6
HOH
HOH
315
B
TIP
317
6
HOH
HOH
317
B
TIP
319
6
HOH
HOH
319
B
TIP
323
6
HOH
HOH
323
B
TIP
327
6
HOH
HOH
327
B
TIP
332
6
HOH
HOH
332
B
TIP
339
6
HOH
HOH
339
B
TIP
342
6
HOH
HOH
342
B
TIP
343
6
HOH
HOH
343
B
TIP
345
6
HOH
HOH
345
B
TIP
347
6
HOH
HOH
347
B
TIP
349
6
HOH
HOH
349
B
TIP
350
6
HOH
HOH
350
B
TIP
351
6
HOH
HOH
351
B
TIP
352
6
HOH
HOH
352
B
TIP
353
6
HOH
HOH
353
B
TIP
358
6
HOH
HOH
358
B
TIP
362
6
HOH
HOH
362
B
TIP
363
6
HOH
HOH
363
B
TIP
365
6
HOH
HOH
365
B
TIP
366
6
HOH
HOH
366
B
TIP
369
6
HOH
HOH
369
B
TIP
370
6
HOH
HOH
370
B
TIP
371
6
HOH
HOH
371
B
TIP
372
6
HOH
HOH
372
B
TIP
374
6
HOH
HOH
374
B
TIP
377
6
HOH
HOH
377
B
TIP
379
6
HOH
HOH
379
B
TIP
381
6
HOH
HOH
381
B
TIP
386
6
HOH
HOH
386
B
TIP
387
6
HOH
HOH
387
B
TIP
389
6
HOH
HOH
389
B
TIP
390
6
HOH
HOH
390
B
TIP
391
6
HOH
HOH
391
B
TIP
392
6
HOH
HOH
392
B
TIP
395
6
HOH
HOH
395
B
TIP
396
6
HOH
HOH
396
B
TIP
397
6
HOH
HOH
397
B
TIP
398
6
HOH
HOH
398
B
TIP
399
6
HOH
HOH
399
B
TIP
404
6
HOH
HOH
404
B
TIP
405
6
HOH
HOH
405
B
TIP
415
6
HOH
HOH
415
B
TIP
420
6
HOH
HOH
420
B
TIP
424
6
HOH
HOH
424
B
TIP
427
6
HOH
HOH
427
B
TIP
434
6
HOH
HOH
434
B
TIP
435
6
HOH
HOH
435
B
TIP
436
6
HOH
HOH
436
B
TIP
442
6
HOH
HOH
442
B
TIP
447
6
HOH
HOH
447
B
TIP
448
6
HOH
HOH
448
B
TIP
450
6
HOH
HOH
450
B
TIP
451
6
HOH
HOH
451
B
TIP
454
6
HOH
HOH
454
B
TIP
460
6
HOH
HOH
460
B
TIP
461
6
HOH
HOH
461
B
TIP
466
6
HOH
HOH
466
B
TIP
467
6
HOH
HOH
467
B
TIP
469
6
HOH
HOH
469
B
TIP
473
6
HOH
HOH
473
B
TIP
476
6
HOH
HOH
476
B
TIP
482
6
HOH
HOH
482
B
TIP
483
6
HOH
HOH
483
B
TIP
484
6
HOH
HOH
484
B
TIP
489
6
HOH
HOH
489
B
TIP
490
6
HOH
HOH
490
B
TIP
491
6
HOH
HOH
491
B
TIP
493
6
HOH
HOH
493
B
TIP
494
6
HOH
HOH
494
B
TIP
496
6
HOH
HOH
496
B
TIP
499
6
HOH
HOH
499
B
TIP
502
6
HOH
HOH
502
B
TIP
505
6
HOH
HOH
505
B
TIP
506
6
HOH
HOH
506
B
TIP
507
6
HOH
HOH
507
B
TIP
508
6
HOH
HOH
508
B
TIP
513
6
HOH
HOH
513
B
TIP
514
6
HOH
HOH
514
B
TIP
516
6
HOH
HOH
516
B
TIP
517
6
HOH
HOH
517
B
TIP
522
6
HOH
HOH
522
B
TIP
523
6
HOH
HOH
523
B
TIP
524
6
HOH
HOH
524
B
TIP
529
6
HOH
HOH
529
B
TIP
530
6
HOH
HOH
530
B
TIP
534
6
HOH
HOH
534
B
TIP
535
6
HOH
HOH
535
B
TIP
536
6
HOH
HOH
536
B
TIP
537
6
HOH
HOH
537
B
TIP
539
6
HOH
HOH
539
B
TIP
540
6
HOH
HOH
540
B
TIP
541
6
HOH
HOH
541
B
TIP
543
6
HOH
HOH
543
B
MET
1
n
1
MET
1
A
ILE
2
n
2
ILE
2
A
VAL
3
n
3
VAL
3
A
THR
4
n
4
THR
4
A
SER
5
n
5
SER
5
A
GLY
6
n
6
GLY
6
A
VAL
7
n
7
VAL
7
A
LEU
8
n
8
LEU
8
A
VAL
9
n
9
VAL
9
A
GLU
10
n
10
GLU
10
A
ASN
11
n
11
ASN
11
A
GLY
12
n
12
GLY
12
A
LYS
13
n
13
LYS
13
A
VAL
14
n
14
VAL
14
A
LEU
15
n
15
LEU
15
A
LEU
16
n
16
LEU
16
A
VAL
17
n
17
VAL
17
A
LYS
18
n
18
LYS
18
A
HIS
19
n
19
HIS
19
A
LYS
20
n
20
LYS
20
A
ARG
21
n
21
ARG
21
A
LEU
22
n
22
LEU
22
A
GLY
23
n
23
GLY
23
A
VAL
24
n
24
VAL
24
A
TYR
25
n
25
TYR
25
A
ILE
26
n
26
ILE
26
A
TYR
27
n
27
TYR
27
A
PRO
28
n
28
PRO
28
A
GLY
29
n
29
GLY
29
A
GLY
30
n
30
GLY
30
A
HIS
31
n
31
HIS
31
A
VAL
32
n
32
VAL
32
A
GLU
33
n
33
GLU
33
A
HIS
34
n
34
HIS
34
A
ASN
35
n
35
ASN
35
A
GLU
36
n
36
GLU
36
A
THR
37
n
37
THR
37
A
PRO
38
n
38
PRO
38
A
ILE
39
n
39
ILE
39
A
GLU
40
n
40
GLU
40
A
ALA
41
n
41
ALA
41
A
VAL
42
n
42
VAL
42
A
LYS
43
n
43
LYS
43
A
ARG
44
n
44
ARG
44
A
GLU
45
n
45
GLU
45
A
PHE
46
n
46
PHE
46
A
GLU
47
n
47
GLU
47
A
GLU
48
n
48
GLU
48
A
GLU
49
n
49
GLU
49
A
THR
50
n
50
THR
50
A
GLY
51
n
51
GLY
51
A
ILE
52
n
52
ILE
52
A
VAL
53
n
53
VAL
53
A
VAL
54
n
54
VAL
54
A
GLU
55
n
55
GLU
55
A
PRO
56
n
56
PRO
56
A
ILE
57
n
57
ILE
57
A
GLY
58
n
58
GLY
58
A
PHE
59
n
59
PHE
59
A
THR
60
n
60
THR
60
A
TYR
61
n
61
TYR
61
A
GLY
62
n
62
GLY
62
A
ILE
63
n
63
ILE
63
A
ILE
64
n
64
ILE
64
A
ASP
65
n
65
ASP
65
A
GLU
66
n
66
GLU
66
A
ASN
67
n
67
ASN
67
A
ALA
68
n
68
ALA
68
A
VAL
69
n
69
VAL
69
A
GLU
70
n
70
GLU
70
A
ARG
71
n
71
ARG
71
A
PRO
72
n
72
PRO
72
A
MET
73
n
73
MET
73
A
PRO
74
n
74
PRO
74
A
LEU
75
n
75
LEU
75
A
VAL
76
n
76
VAL
76
A
ILE
77
n
77
ILE
77
A
LEU
78
n
78
LEU
78
A
GLU
79
n
79
GLU
79
A
GLU
80
n
80
GLU
80
A
VAL
81
n
81
VAL
81
A
VAL
82
n
82
VAL
82
A
LYS
83
n
83
LYS
83
A
TYR
84
n
84
TYR
84
A
PRO
85
n
85
PRO
85
A
GLU
86
n
86
GLU
86
A
GLU
87
n
87
GLU
87
A
THR
88
n
88
THR
88
A
HIS
89
n
89
HIS
89
A
ILE
90
n
90
ILE
90
A
HIS
91
n
91
HIS
91
A
PHE
92
n
92
PHE
92
A
ASP
93
n
93
ASP
93
A
LEU
94
n
94
LEU
94
A
ILE
95
n
95
ILE
95
A
TYR
96
n
96
TYR
96
A
LEU
97
n
97
LEU
97
A
VAL
98
n
98
VAL
98
A
LYS
99
n
99
LYS
99
A
ARG
100
n
100
ARG
100
A
VAL
101
n
101
VAL
101
A
GLY
102
n
102
GLY
102
A
GLY
103
n
103
GLY
103
A
ASP
104
n
104
ASP
104
A
LEU
105
n
105
LEU
105
A
LYS
106
n
106
LYS
106
A
ASN
107
n
107
ASN
107
A
GLY
108
n
108
GLY
108
A
GLU
109
n
109
GLU
109
A
TRP
110
n
110
TRP
110
A
ILE
111
n
111
ILE
111
A
ASP
112
n
112
ASP
112
A
VAL
113
n
113
VAL
113
A
ARG
114
n
114
ARG
114
A
GLU
115
n
115
GLU
115
A
ILE
116
n
116
ILE
116
A
ASP
117
n
117
ASP
117
A
ARG
118
n
118
ARG
118
A
ILE
119
n
119
ILE
119
A
GLU
120
n
120
GLU
120
A
THR
121
n
121
THR
121
A
PHE
122
n
122
PHE
122
A
PRO
123
n
123
PRO
123
A
ASN
124
n
124
ASN
124
A
VAL
125
n
125
VAL
125
A
ARG
126
n
126
ARG
126
A
LYS
127
n
127
LYS
127
A
VAL
128
n
128
VAL
128
A
VAL
129
n
129
VAL
129
A
SER
130
n
130
SER
130
A
LEU
131
n
131
LEU
131
A
ALA
132
n
132
ALA
132
A
LEU
133
n
133
LEU
133
A
SER
134
n
134
SER
134
A
THR
135
n
135
THR
135
A
LEU
136
n
136
LEU
136
A
TYR
137
n
137
TYR
137
A
ARG
138
n
138
ARG
138
A
LEU
139
n
139
LEU
139
A
GLY
140
n
140
GLY
140
A
LYS
141
n
141
LYS
141
A
ILE
142
n
142
ILE
142
A
SER
143
n
143
SER
143
A
LYS
144
n
144
LYS
144
A
LEU
145
n
145
LEU
145
A
ALA
146
n
146
ALA
146
A
ALA
147
n
147
ALA
147
A
ALA
148
n
148
ALA
148
A
LEU
149
n
149
LEU
149
A
GLU
150
n
150
GLU
150
A
HIS
151
n
151
HIS
151
A
HIS
152
n
152
HIS
152
A
n
153
153
A
n
154
154
A
n
155
155
A
n
156
156
A
MET
1
n
1
MET
1
B
ILE
2
n
2
ILE
2
B
VAL
3
n
3
VAL
3
B
THR
4
n
4
THR
4
B
SER
5
n
5
SER
5
B
GLY
6
n
6
GLY
6
B
VAL
7
n
7
VAL
7
B
LEU
8
n
8
LEU
8
B
VAL
9
n
9
VAL
9
B
GLU
10
n
10
GLU
10
B
ASN
11
n
11
ASN
11
B
GLY
12
n
12
GLY
12
B
LYS
13
n
13
LYS
13
B
VAL
14
n
14
VAL
14
B
LEU
15
n
15
LEU
15
B
LEU
16
n
16
LEU
16
B
VAL
17
n
17
VAL
17
B
LYS
18
n
18
LYS
18
B
HIS
19
n
19
HIS
19
B
LYS
20
n
20
LYS
20
B
ARG
21
n
21
ARG
21
B
LEU
22
n
22
LEU
22
B
GLY
23
n
23
GLY
23
B
VAL
24
n
24
VAL
24
B
TYR
25
n
25
TYR
25
B
ILE
26
n
26
ILE
26
B
TYR
27
n
27
TYR
27
B
PRO
28
n
28
PRO
28
B
GLY
29
n
29
GLY
29
B
GLY
30
n
30
GLY
30
B
HIS
31
n
31
HIS
31
B
VAL
32
n
32
VAL
32
B
GLU
33
n
33
GLU
33
B
HIS
34
n
34
HIS
34
B
ASN
35
n
35
ASN
35
B
GLU
36
n
36
GLU
36
B
THR
37
n
37
THR
37
B
PRO
38
n
38
PRO
38
B
ILE
39
n
39
ILE
39
B
GLU
40
n
40
GLU
40
B
ALA
41
n
41
ALA
41
B
VAL
42
n
42
VAL
42
B
LYS
43
n
43
LYS
43
B
ARG
44
n
44
ARG
44
B
GLU
45
n
45
GLU
45
B
PHE
46
n
46
PHE
46
B
GLU
47
n
47
GLU
47
B
GLU
48
n
48
GLU
48
B
GLU
49
n
49
GLU
49
B
THR
50
n
50
THR
50
B
GLY
51
n
51
GLY
51
B
ILE
52
n
52
ILE
52
B
VAL
53
n
53
VAL
53
B
VAL
54
n
54
VAL
54
B
GLU
55
n
55
GLU
55
B
PRO
56
n
56
PRO
56
B
ILE
57
n
57
ILE
57
B
GLY
58
n
58
GLY
58
B
PHE
59
n
59
PHE
59
B
THR
60
n
60
THR
60
B
TYR
61
n
61
TYR
61
B
GLY
62
n
62
GLY
62
B
ILE
63
n
63
ILE
63
B
ILE
64
n
64
ILE
64
B
ASP
65
n
65
ASP
65
B
GLU
66
n
66
GLU
66
B
ASN
67
n
67
ASN
67
B
ALA
68
n
68
ALA
68
B
VAL
69
n
69
VAL
69
B
GLU
70
n
70
GLU
70
B
ARG
71
n
71
ARG
71
B
PRO
72
n
72
PRO
72
B
MET
73
n
73
MET
73
B
PRO
74
n
74
PRO
74
B
LEU
75
n
75
LEU
75
B
VAL
76
n
76
VAL
76
B
ILE
77
n
77
ILE
77
B
LEU
78
n
78
LEU
78
B
GLU
79
n
79
GLU
79
B
GLU
80
n
80
GLU
80
B
VAL
81
n
81
VAL
81
B
VAL
82
n
82
VAL
82
B
LYS
83
n
83
LYS
83
B
TYR
84
n
84
TYR
84
B
PRO
85
n
85
PRO
85
B
GLU
86
n
86
GLU
86
B
GLU
87
n
87
GLU
87
B
THR
88
n
88
THR
88
B
HIS
89
n
89
HIS
89
B
ILE
90
n
90
ILE
90
B
HIS
91
n
91
HIS
91
B
PHE
92
n
92
PHE
92
B
ASP
93
n
93
ASP
93
B
LEU
94
n
94
LEU
94
B
ILE
95
n
95
ILE
95
B
TYR
96
n
96
TYR
96
B
LEU
97
n
97
LEU
97
B
VAL
98
n
98
VAL
98
B
LYS
99
n
99
LYS
99
B
ARG
100
n
100
ARG
100
B
VAL
101
n
101
VAL
101
B
GLY
102
n
102
GLY
102
B
GLY
103
n
103
GLY
103
B
ASP
104
n
104
ASP
104
B
LEU
105
n
105
LEU
105
B
LYS
106
n
106
LYS
106
B
ASN
107
n
107
ASN
107
B
GLY
108
n
108
GLY
108
B
GLU
109
n
109
GLU
109
B
TRP
110
n
110
TRP
110
B
ILE
111
n
111
ILE
111
B
ASP
112
n
112
ASP
112
B
VAL
113
n
113
VAL
113
B
ARG
114
n
114
ARG
114
B
GLU
115
n
115
GLU
115
B
ILE
116
n
116
ILE
116
B
ASP
117
n
117
ASP
117
B
ARG
118
n
118
ARG
118
B
ILE
119
n
119
ILE
119
B
GLU
120
n
120
GLU
120
B
THR
121
n
121
THR
121
B
PHE
122
n
122
PHE
122
B
PRO
123
n
123
PRO
123
B
ASN
124
n
124
ASN
124
B
VAL
125
n
125
VAL
125
B
ARG
126
n
126
ARG
126
B
LYS
127
n
127
LYS
127
B
VAL
128
n
128
VAL
128
B
VAL
129
n
129
VAL
129
B
SER
130
n
130
SER
130
B
LEU
131
n
131
LEU
131
B
ALA
132
n
132
ALA
132
B
LEU
133
n
133
LEU
133
B
SER
134
n
134
SER
134
B
THR
135
n
135
THR
135
B
LEU
136
n
136
LEU
136
B
TYR
137
n
137
TYR
137
B
ARG
138
n
138
ARG
138
B
LEU
139
n
139
LEU
139
B
GLY
140
n
140
GLY
140
B
LYS
141
n
141
LYS
141
B
ILE
142
n
142
ILE
142
B
SER
143
n
143
SER
143
B
LYS
144
n
144
LYS
144
B
LEU
145
n
145
LEU
145
B
ALA
146
n
146
ALA
146
B
ALA
147
n
147
ALA
147
B
ALA
148
n
148
ALA
148
B
LEU
149
n
149
LEU
149
B
GLU
150
n
150
GLU
150
B
n
151
151
B
n
152
152
B
n
153
153
B
n
154
154
B
n
155
155
B
n
156
156
B
author_and_software_defined_assembly
PISA
2
dimeric
5100
-76
15500
B
HOH
505
P
O
HOH
1_555
B
NI
212
J
NI
NI
1_555
B
HOH
506
P
O
HOH
1_555
109.9
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
B
N
ASP
65
B
N
ASP
65
B
O
ALA
68
B
O
ALA
68
B
O
VAL
69
B
O
VAL
69
A
N
GLU
79
A
N
GLU
79
A
N
LEU
78
A
N
LEU
78
A
O
ASP
93
A
O
ASP
93
A
O
TYR
96
A
O
TYR
96
A
N
SER
5
A
N
SER
5
A
N
THR
4
A
N
THR
4
A
O
GLY
30
A
O
GLY
30
B
N
ASP
65
B
N
ASP
65
B
O
ALA
68
B
O
ALA
68
B
O
VAL
69
B
O
VAL
69
A
N
GLU
79
A
N
GLU
79
A
N
LEU
78
A
N
LEU
78
A
O
ASP
93
A
O
ASP
93
A
O
VAL
101
A
O
VAL
101
A
N
VAL
53
A
N
VAL
53
A
O
ILE
111
A
O
ILE
111
A
N
VAL
14
A
N
VAL
14
A
O
LYS
13
A
O
LYS
13
A
N
GLU
10
A
N
GLU
10
A
O
ILE
111
A
O
ILE
111
A
N
VAL
14
A
N
VAL
14
A
N
VAL
17
A
N
VAL
17
A
O
ILE
26
A
O
ILE
26
A
N
VAL
69
A
N
VAL
69
B
O
GLU
79
B
O
GLU
79
B
N
VAL
82
B
N
VAL
82
B
O
HIS
89
B
O
HIS
89
B
O
TYR
96
B
O
TYR
96
B
N
SER
5
B
N
SER
5
B
N
THR
4
B
N
THR
4
B
O
GLY
30
B
O
GLY
30
A
N
VAL
69
A
N
VAL
69
B
O
GLU
79
B
O
GLU
79
B
N
VAL
82
B
N
VAL
82
B
O
HIS
89
B
O
HIS
89
B
O
VAL
101
B
O
VAL
101
B
N
VAL
53
B
N
VAL
53
B
O
ILE
111
B
O
ILE
111
B
N
VAL
14
B
N
VAL
14
B
O
LYS
13
B
O
LYS
13
B
N
GLU
10
B
N
GLU
10
B
O
ILE
111
B
O
ILE
111
B
N
VAL
14
B
N
VAL
14
B
N
VAL
17
B
N
VAL
17
B
O
ILE
26
B
O
ILE
26
1
A
HIS
153
A
HIS
153
1
Y
1
A
HIS
154
A
HIS
154
1
Y
1
A
HIS
155
A
HIS
155
1
Y
1
A
HIS
156
A
HIS
156
1
Y
1
B
HIS
151
B
HIS
151
1
Y
1
B
HIS
152
B
HIS
152
1
Y
1
B
HIS
153
B
HIS
153
1
Y
1
B
HIS
154
B
HIS
154
1
Y
1
B
HIS
155
B
HIS
155
1
Y
1
B
HIS
156
B
HIS
156
1
Y
1
A
ASP
65
-161.64
-166.88
1
A
ASN
124
67.67
-1.32
1
B
GLU
87
-173.16
149.25
PROTEIN_REP.PARAM
PROTEIN.TOP
WATER_REP.PARAM
WATER_REP.TOP
ION.PARAM
ION.TOP
OTHERS.PAR
OTHERS.TOP
21.3
-3.46
0.00
0.00
-0.32
0.00
3.79
0.2200000
0.004
0.1840000
1.80
19.74
2463
30585
30585
8.1
98.7
RANDOM
1466528.32
0.000000
1
RESTRAINED
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
1K26, same protein solved by SAD with iridium derivative data.
Engh & Huber
FLAT MODEL
46.1588
0.38221
0.23
0.18
5.00
0.17
0.13
1.80
19.74
243
2713
56
0
2414
0.016
1.7
24.3
1.09
1.84
1.50
2.56
2.00
3.14
2.00
4.48
2.50
1
CONSTRAINED
1
X-RAY DIFFRACTION
0.2890000
0.015
0.2340000
1.91
393
4457
4838
6
8.1
95.6
14.6
1.8
100
1K2E
30654
30654
-3.0
0.0800000
1
18.4
4.8
98.8
1.8
1.86
3.26
2934
0.4430000
1
4.36
96.4
phasing
AMoRE
refinement
CNS
1.0
data reduction
DENZO
data scaling
SCALEPACK
crystal structure of a nudix protein from Pyrobaculum aerophilum
1
N
N
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
4
N
N
5
N
N
2
N
N
3
N
N
4
N
N
4
N
N
4
N
N
5
N
N
6
N
N
6
N
N
The biological assembly is a dimer as in the asymmetric unit.
A
THR
37
A
THR
37
HELX_P
A
GLY
51
A
GLY
51
1
1
15
A
ARG
114
A
ARG
114
HELX_P
A
ILE
119
A
ILE
119
5
2
6
A
ASN
124
A
ASN
124
HELX_P
A
GLU
150
A
GLU
150
1
3
27
B
THR
37
B
THR
37
HELX_P
B
GLY
51
B
GLY
51
1
4
15
B
ARG
114
B
ARG
114
HELX_P
B
ILE
119
B
ILE
119
5
5
6
B
ASN
124
B
ASN
124
HELX_P
B
LEU
139
B
LEU
139
1
6
16
B
SER
143
B
SER
143
HELX_P
B
ALA
148
B
ALA
148
1
7
6
metalc
1.778
A
NI
211
D
NI
NI
1_555
A
HOH
504
O
O
HOH
1_555
metalc
2.418
B
NI
212
J
NI
NI
1_555
B
HOH
505
P
O
HOH
1_555
metalc
2.507
B
NI
212
J
NI
NI
1_555
B
HOH
506
P
O
HOH
1_555
STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Nudix/MutT-like fold, Mixed alpha/beta, dimer, putative Nudix hydrolase, STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Q8ZTD8_PYRAE
UNP
1
6
Q8ZTD8
6
146
1K2E
2
142
Q8ZTD8
A
1
2
142
6
146
1K2E
2
142
Q8ZTD8
B
1
2
142
6
5
3
3
5
4
3
3
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
B
ILE
64
B
ILE
64
B
ASP
65
B
ASP
65
B
ALA
68
B
ALA
68
B
GLU
70
B
GLU
70
A
VAL
76
A
VAL
76
A
LYS
83
A
LYS
83
A
THR
88
A
THR
88
A
GLY
103
A
GLY
103
A
ILE
2
A
ILE
2
A
VAL
7
A
VAL
7
A
GLY
29
A
GLY
29
A
HIS
31
A
HIS
31
B
ILE
64
B
ILE
64
B
ASP
65
B
ASP
65
B
ALA
68
B
ALA
68
B
GLU
70
B
GLU
70
A
VAL
76
A
VAL
76
A
LYS
83
A
LYS
83
A
THR
88
A
THR
88
A
GLY
103
A
GLY
103
A
ILE
52
A
ILE
52
A
PRO
56
A
PRO
56
A
GLU
109
A
GLU
109
A
ASP
112
A
ASP
112
A
LYS
13
A
LYS
13
A
LYS
18
A
LYS
18
A
VAL
9
A
VAL
9
A
GLU
10
A
GLU
10
A
GLU
109
A
GLU
109
A
ASP
112
A
ASP
112
A
LYS
13
A
LYS
13
A
LYS
18
A
LYS
18
A
TYR
25
A
TYR
25
A
ILE
26
A
ILE
26
A
ALA
68
A
ALA
68
A
GLU
70
A
GLU
70
B
VAL
76
B
VAL
76
B
TYR
84
B
TYR
84
B
GLU
87
B
GLU
87
B
GLY
103
B
GLY
103
B
ILE
2
B
ILE
2
B
VAL
7
B
VAL
7
B
GLY
29
B
GLY
29
B
HIS
31
B
HIS
31
A
ALA
68
A
ALA
68
A
GLU
70
A
GLU
70
B
VAL
76
B
VAL
76
B
TYR
84
B
TYR
84
B
GLU
87
B
GLU
87
B
GLY
103
B
GLY
103
B
ILE
52
B
ILE
52
B
ILE
57
B
ILE
57
B
GLU
109
B
GLU
109
B
ASP
112
B
ASP
112
B
LYS
13
B
LYS
13
B
LYS
18
B
LYS
18
B
VAL
9
B
VAL
9
B
GLU
10
B
GLU
10
B
GLU
109
B
GLU
109
B
ASP
112
B
ASP
112
B
LYS
13
B
LYS
13
B
LYS
18
B
LYS
18
B
TYR
25
B
TYR
25
B
ILE
26
B
ILE
26
BINDING SITE FOR RESIDUE SO4 A 201
A
SO4
201
Software
7
BINDING SITE FOR RESIDUE SO4 B 202
B
SO4
202
Software
7
BINDING SITE FOR RESIDUE NI A 211
A
NI
211
Software
2
BINDING SITE FOR RESIDUE NI B 212
B
NI
212
Software
4
BINDING SITE FOR RESIDUE GOL A 203
A
GOL
203
Software
8
BINDING SITE FOR RESIDUE GOL A 204
A
GOL
204
Software
9
BINDING SITE FOR RESIDUE GOL B 205
B
GOL
205
Software
5
BINDING SITE FOR RESIDUE GOL A 206
A
GOL
206
Software
4
BINDING SITE FOR RESIDUE GOL B 207
B
GOL
207
Software
5
BINDING SITE FOR RESIDUE GOL B 208
B
GOL
208
Software
4
BINDING SITE FOR RESIDUE ACY B 209
B
ACY
209
Software
8
BINDING SITE FOR RESIDUE ACY A 210
A
ACY
210
Software
5
A
ASN
124
A
ASN
124
7
1_555
A
VAL
125
A
VAL
125
7
1_555
A
ARG
126
A
ARG
126
7
1_555
A
LYS
127
A
LYS
127
7
1_555
A
HOH
309
O
HOH
7
1_555
B
HOH
377
P
HOH
7
1_455
B
HOH
450
P
HOH
7
1_455
B
PRO
123
B
PRO
123
7
1_555
B
ASN
124
B
ASN
124
7
1_555
B
VAL
125
B
VAL
125
7
1_555
B
ARG
126
B
ARG
126
7
1_555
B
LYS
127
B
LYS
127
7
1_555
B
HOH
434
P
HOH
7
1_555
B
HOH
537
P
HOH
7
1_555
A
HIS
91
A
HIS
91
2
1_555
A
HOH
504
O
HOH
2
1_555
B
HIS
31
B
HIS
31
4
1_555
B
TYR
84
B
TYR
84
4
1_555
B
HOH
505
P
HOH
4
1_555
B
HOH
506
P
HOH
4
1_555
A
VAL
3
A
VAL
3
8
1_555
A
ILE
26
A
ILE
26
8
1_555
A
GLY
29
A
GLY
29
8
1_555
A
GLY
30
A
GLY
30
8
1_555
A
GLU
80
A
GLU
80
8
1_555
A
HIS
91
A
HIS
91
8
1_555
A
GOL
204
F
GOL
8
1_555
A
HOH
333
O
HOH
8
1_555
A
VAL
17
A
VAL
17
9
1_555
A
LYS
18
A
LYS
18
9
1_555
A
HIS
19
A
HIS
19
9
1_555
A
LYS
20
A
LYS
20
9
1_555
A
GLY
29
A
GLY
29
9
1_555
A
GLU
49
A
GLU
49
9
1_555
A
GOL
203
E
GOL
9
1_555
A
HOH
426
O
HOH
9
1_555
A
HOH
441
O
HOH
9
1_555
B
HIS
19
B
HIS
19
5
1_555
B
GLU
80
B
GLU
80
5
1_555
B
HIS
91
B
HIS
91
5
1_555
B
HOH
473
P
HOH
5
1_555
B
HOH
506
P
HOH
5
1_555
A
SER
134
A
SER
134
4
1_555
A
TYR
137
A
TYR
137
4
1_555
A
ARG
138
A
ARG
138
4
1_555
B
ASN
35
B
ASN
35
4
3_555
A
ASN
35
A
ASN
35
5
1_555
B
MET
1
B
MET
1
5
1_555
B
HIS
89
B
HIS
89
5
1_555
B
ILE
90
B
ILE
90
5
1_555
B
HIS
91
B
HIS
91
5
1_555
B
GLU
10
B
GLU
10
4
1_555
B
ASN
11
B
ASN
11
4
1_555
B
ARG
100
B
ARG
100
4
1_555
B
HOH
374
P
HOH
4
1_555
B
LEU
78
B
LEU
78
8
1_555
B
GLU
80
B
GLU
80
8
1_555
B
ASP
93
B
ASP
93
8
1_555
B
PHE
122
B
PHE
122
8
1_555
B
PRO
123
B
PRO
123
8
1_555
B
ASN
124
B
ASN
124
8
1_555
B
VAL
125
B
VAL
125
8
1_555
B
HOH
349
P
HOH
8
1_555
A
VAL
82
A
VAL
82
5
1_555
A
LYS
83
A
LYS
83
5
1_555
A
HOH
340
O
HOH
5
1_555
A
HOH
414
O
HOH
5
1_555
B
HOH
339
P
HOH
5
1_555
19
P 21 21 21