1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Huang, Q.
Petros, A.M.
Virgin, H.W.
Fesik, S.W.
Olejniczak, E.T.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
99
3428
3433
10.1073/pnas.062525799
11904405
Solution structure of a Bcl-2 homolog from Kaposi sarcoma virus.
2002
10.2210/pdb1k3k/pdb
pdb_00001k3k
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
1
1.0
17758.215
functional anti-apoptotic factor vBCL-2 homolog
N76D, V117A
1
man
polymer
no
no
MDEDVLPGEVLAIEGIFMACGLNEPEYLYHPLLSPIKLYITGLMRDKESLFEAMLANVRFHSTTGIDQLGLSMLQVSGDG
NMNWGRALAILTFGSFVAQKLSNEPHLRDFALAVLPAYAYEAIGPQWFRARGGWRGLKAYCTQVLTDDDDLEHHHHHH
MDEDVLPGEVLAIEGIFMACGLNEPEYLYHPLLSPIKLYITGLMRDKESLFEAMLANVRFHSTTGIDQLGLSMLQVSGDG
NMNWGRALAILTFGSFVAQKLSNEPHLRDFALAVLPAYAYEAIGPQWFRARGGWRGLKAYCTQVLTDDDDLEHHHHHH
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Rhadinovirus
Escherichia
sample
37296
Human herpesvirus 8
562
Escherichia coli
database_2
pdbx_struct_assembly
pdbx_struct_oper_list
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
1
0
2002-04-10
1
1
2008-04-27
1
2
2011-07-13
1
3
2021-10-27
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
RCSB
Y
RCSB
2001-10-03
REL
AVERAGE, MINIMIZED
100
1
HNCA
HN(CO)CA
HN(CA)CB
HN(COCA)CB
HNCO
HN(CA)CO
13C-NOESY
15N-NOESY
20 mM
7.8
ATMOSPHERIC
atm
298
K
simulated annealing
0.5-1.0 MM PROTEIN, 20 mM2 H-TRIS, 5 mM2 H-dithiothreitol
structure solution
CNX
refinement
CNX
500
Bruker
DRX
600
Bruker
DRX
800
Bruker
DRX
MET
1
n
1
MET
1
A
ASP
2
n
2
ASP
2
A
GLU
3
n
3
GLU
3
A
ASP
4
n
4
ASP
4
A
VAL
5
n
5
VAL
5
A
LEU
6
n
6
LEU
6
A
PRO
7
n
7
PRO
7
A
GLY
8
n
8
GLY
8
A
GLU
9
n
9
GLU
9
A
VAL
10
n
10
VAL
10
A
LEU
11
n
11
LEU
11
A
ALA
12
n
12
ALA
12
A
ILE
13
n
13
ILE
13
A
GLU
14
n
14
GLU
14
A
GLY
15
n
15
GLY
15
A
ILE
16
n
16
ILE
16
A
PHE
17
n
17
PHE
17
A
MET
18
n
18
MET
18
A
ALA
19
n
19
ALA
19
A
CYS
20
n
20
CYS
20
A
GLY
21
n
21
GLY
21
A
LEU
22
n
22
LEU
22
A
ASN
23
n
23
ASN
23
A
GLU
24
n
24
GLU
24
A
PRO
25
n
25
PRO
25
A
GLU
26
n
26
GLU
26
A
TYR
27
n
27
TYR
27
A
LEU
28
n
28
LEU
28
A
TYR
29
n
29
TYR
29
A
HIS
30
n
30
HIS
30
A
PRO
31
n
31
PRO
31
A
LEU
32
n
32
LEU
32
A
LEU
33
n
33
LEU
33
A
SER
34
n
34
SER
34
A
PRO
35
n
35
PRO
35
A
ILE
36
n
36
ILE
36
A
LYS
37
n
37
LYS
37
A
LEU
38
n
38
LEU
38
A
TYR
39
n
39
TYR
39
A
ILE
40
n
40
ILE
40
A
THR
41
n
41
THR
41
A
GLY
42
n
42
GLY
42
A
LEU
43
n
43
LEU
43
A
MET
44
n
44
MET
44
A
ARG
45
n
45
ARG
45
A
ASP
46
n
46
ASP
46
A
LYS
47
n
47
LYS
47
A
GLU
48
n
48
GLU
48
A
SER
49
n
49
SER
49
A
LEU
50
n
50
LEU
50
A
PHE
51
n
51
PHE
51
A
GLU
52
n
52
GLU
52
A
ALA
53
n
53
ALA
53
A
MET
54
n
54
MET
54
A
LEU
55
n
55
LEU
55
A
ALA
56
n
56
ALA
56
A
ASN
57
n
57
ASN
57
A
VAL
58
n
58
VAL
58
A
ARG
59
n
59
ARG
59
A
PHE
60
n
60
PHE
60
A
HIS
61
n
61
HIS
61
A
SER
62
n
62
SER
62
A
THR
63
n
63
THR
63
A
THR
64
n
64
THR
64
A
GLY
65
n
65
GLY
65
A
ILE
66
n
66
ILE
66
A
ASP
67
n
67
ASP
67
A
GLN
68
n
68
GLN
68
A
LEU
69
n
69
LEU
69
A
GLY
70
n
70
GLY
70
A
LEU
71
n
71
LEU
71
A
SER
72
n
72
SER
72
A
MET
73
n
73
MET
73
A
LEU
74
n
74
LEU
74
A
GLN
75
n
75
GLN
75
A
VAL
76
n
76
VAL
76
A
SER
77
n
77
SER
77
A
GLY
78
n
78
GLY
78
A
ASP
79
n
79
ASP
79
A
GLY
80
n
80
GLY
80
A
ASN
81
n
81
ASN
81
A
MET
82
n
82
MET
82
A
ASN
83
n
83
ASN
83
A
TRP
84
n
84
TRP
84
A
GLY
85
n
85
GLY
85
A
ARG
86
n
86
ARG
86
A
ALA
87
n
87
ALA
87
A
LEU
88
n
88
LEU
88
A
ALA
89
n
89
ALA
89
A
ILE
90
n
90
ILE
90
A
LEU
91
n
91
LEU
91
A
THR
92
n
92
THR
92
A
PHE
93
n
93
PHE
93
A
GLY
94
n
94
GLY
94
A
SER
95
n
95
SER
95
A
PHE
96
n
96
PHE
96
A
VAL
97
n
97
VAL
97
A
ALA
98
n
98
ALA
98
A
GLN
99
n
99
GLN
99
A
LYS
100
n
100
LYS
100
A
LEU
101
n
101
LEU
101
A
SER
102
n
102
SER
102
A
ASN
103
n
103
ASN
103
A
GLU
104
n
104
GLU
104
A
PRO
105
n
105
PRO
105
A
HIS
106
n
106
HIS
106
A
LEU
107
n
107
LEU
107
A
ARG
108
n
108
ARG
108
A
ASP
109
n
109
ASP
109
A
PHE
110
n
110
PHE
110
A
ALA
111
n
111
ALA
111
A
LEU
112
n
112
LEU
112
A
ALA
113
n
113
ALA
113
A
VAL
114
n
114
VAL
114
A
LEU
115
n
115
LEU
115
A
PRO
116
n
116
PRO
116
A
ALA
117
n
117
ALA
117
A
TYR
118
n
118
TYR
118
A
ALA
119
n
119
ALA
119
A
TYR
120
n
120
TYR
120
A
GLU
121
n
121
GLU
121
A
ALA
122
n
122
ALA
122
A
ILE
123
n
123
ILE
123
A
GLY
124
n
124
GLY
124
A
PRO
125
n
125
PRO
125
A
GLN
126
n
126
GLN
126
A
TRP
127
n
127
TRP
127
A
PHE
128
n
128
PHE
128
A
ARG
129
n
129
ARG
129
A
ALA
130
n
130
ALA
130
A
ARG
131
n
131
ARG
131
A
GLY
132
n
132
GLY
132
A
GLY
133
n
133
GLY
133
A
TRP
134
n
134
TRP
134
A
ARG
135
n
135
ARG
135
A
GLY
136
n
136
GLY
136
A
LEU
137
n
137
LEU
137
A
LYS
138
n
138
LYS
138
A
ALA
139
n
139
ALA
139
A
TYR
140
n
140
TYR
140
A
CYS
141
n
141
CYS
141
A
THR
142
n
142
THR
142
A
GLN
143
n
143
GLN
143
A
VAL
144
n
144
VAL
144
A
LEU
145
n
145
LEU
145
A
THR
146
n
146
THR
146
A
n
147
147
A
n
148
148
A
n
149
149
A
n
150
150
A
n
151
151
A
n
152
152
A
n
153
153
A
n
154
154
A
n
155
155
A
n
156
156
A
n
157
157
A
n
158
158
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
ASP
147
A
ASP
147
1
Y
1
A
ASP
148
A
ASP
148
1
Y
1
A
ASP
149
A
ASP
149
1
Y
1
A
ASP
150
A
ASP
150
1
Y
1
A
LEU
151
A
LEU
151
1
Y
1
A
GLU
152
A
GLU
152
1
Y
1
A
HIS
153
A
HIS
153
1
Y
1
A
HIS
154
A
HIS
154
1
Y
1
A
HIS
155
A
HIS
155
1
Y
1
A
HIS
156
A
HIS
156
1
Y
1
A
HIS
157
A
HIS
157
1
Y
1
A
HIS
158
A
HIS
158
1
Y
1
A
ASP
2
-163.87
32.73
1
A
GLU
3
-56.18
90.91
1
A
LEU
6
-178.75
56.67
1
A
PRO
31
-59.45
-157.39
1
A
LEU
33
-49.33
-91.55
1
A
SER
34
-151.86
41.72
1
A
VAL
58
167.71
150.65
1
A
SER
62
44.52
-166.77
1
A
SER
77
-96.20
40.01
1
A
ASP
79
-176.38
88.21
1
A
MET
82
49.10
93.75
1
A
ARG
86
-64.41
-72.11
1
A
VAL
114
-132.16
-51.14
1
A
ALA
130
-92.07
-62.03
1
A
TRP
134
69.27
-67.89
Solution Structure of a Bcl-2 Homolog from Kaposi's Sarcoma Virus
1
N
N
A
VAL
10
A
VAL
10
HELX_P
A
ALA
19
A
ALA
19
1
1
10
A
SER
34
A
SER
34
HELX_P
A
LEU
55
A
LEU
55
1
2
22
A
HIS
61
A
HIS
61
HELX_P
A
LEU
71
A
LEU
71
1
3
11
A
LEU
71
A
LEU
71
HELX_P
A
SER
77
A
SER
77
1
4
7
A
ASN
83
A
ASN
83
HELX_P
A
LEU
101
A
LEU
101
1
5
19
A
PRO
105
A
PRO
105
HELX_P
A
VAL
114
A
VAL
114
1
6
10
A
VAL
114
A
VAL
114
HELX_P
A
GLY
124
A
GLY
124
1
7
11
A
GLY
124
A
GLY
124
HELX_P
A
ARG
131
A
ARG
131
1
8
8
A
TRP
134
A
TRP
134
HELX_P
A
VAL
144
A
VAL
144
1
9
11
APOPTOSIS
Bcl-2, herpesvirus, solution structure, APOPTOSIS
P90504_HHV8
UNP
1
1
P90504
MDEDVLPGEVLAIEGIFMACGLNEPEYLYHPLLSPIKLYITGLMRDKESLFEAMLANVRFHSTTGINQLGLSMLQVSGDG
NMNWGRALAILTFGSFVAQKLSNEPHLRDFALAVLPVYAYEAIGPQWFRARGGWRGLKAYCTQVLT
1
146
1K3K
1
146
P90504
A
1
1
146
1
ASN
engineered mutation
ASP
67
1K3K
A
P90504
UNP
67
67
1
VAL
engineered mutation
ALA
117
1K3K
A
P90504
UNP
117
117
1
expression tag
ASP
147
1K3K
A
P90504
UNP
147
1
expression tag
ASP
148
1K3K
A
P90504
UNP
148
1
expression tag
ASP
149
1K3K
A
P90504
UNP
149
1
expression tag
ASP
150
1K3K
A
P90504
UNP
150
1
expression tag
LEU
151
1K3K
A
P90504
UNP
151
1
expression tag
GLU
152
1K3K
A
P90504
UNP
152
1
expression tag
HIS
153
1K3K
A
P90504
UNP
153
1
expression tag
HIS
154
1K3K
A
P90504
UNP
154
1
expression tag
HIS
155
1K3K
A
P90504
UNP
155
1
expression tag
HIS
156
1K3K
A
P90504
UNP
156
1
expression tag
HIS
157
1K3K
A
P90504
UNP
157
1
expression tag
HIS
158
1K3K
A
P90504
UNP
158