0.012791 0.000000 0.000000 0.000000 0.012791 0.000000 0.000000 0.000000 0.012438 0.00000 0.00000 0.00000 Sanishvili, R. Joachimiak, A. Edwards, A. Savchenko, A. Skarina, T. Midwest Center for Structural Genomics (MCSG) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 78.180 78.180 80.400 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK J.Mol.Biol. JMOBAK 0070 0022-2836 374 1091 1103 10.1016/j.jmb.2007.10.012 17976651 Molecular basis of the antimutagenic activity of the house-cleaning inosine triphosphate pyrophosphatase RdgB from Escherichia coli. 2007 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 100 1 Double-crystal monochromator, mirror CCD 2001-08-21 CUSTOM-MADE Double-crystal monochromator, mirror CCD 2001-09-10 CUSTOM-MADE SAGITALLY FOCUSED Si(111) MAD M x-ray 1 SAGITALLY FOCUSED Si(111) SINGLE WAVELENGTH M x-ray 1 0.97937 1.0 0.97918 1.0 1.03321 1.0 19-ID APS 0.97937, 0.97918 SYNCHROTRON APS BEAMLINE 19-ID 19-ID APS 1.03321 SYNCHROTRON APS BEAMLINE 19-ID 23871.471 Hypothetical protein yggV 1 man polymer 18.015 water 252 nat water no yes MGSSHHHHHHSSGRENLYFQGH(MSE)QKVVLATGNVGKVRELASLLSDFGLDIVAQTDLGVDSAEETGLTFIENAILKA RHAAKVTALPAIADDSGLAVDVLGGAPGIYSARYSGEDATDQKNLQKLLET(MSE)KDVPDDQRQARFHCVLVYLRHAED PTPLVCHGSWPGVITREPAGTGGFGYDPIFFVPSEGKTAAELTREEKSAISHRGQALKLLLDALRNGGS MGSSHHHHHHSSGRENLYFQGHMQKVVLATGNVGKVRELASLLSDFGLDIVAQTDLGVDSAEETGLTFIENAILKARHAA KVTALPAIADDSGLAVDVLGGAPGIYSARYSGEDATDQKNLQKLLETMKDVPDDQRQARFHCVLVYLRHAEDPTPLVCHG SWPGVITREPAGTGGFGYDPIFFVPSEGKTAAELTREEKSAISHRGQALKLLLDALRNGGS A APC074 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Escherichia Escherichia sample 562 Escherichia coli 562 Escherichia coli 2 2.57 52.18 VAPOR DIFFUSION 5.8 PEG4k, Am. Acetate, Na-Citrate, pH 5.8, VAPOR DIFFUSION ambient Midwest Center for Structural Genomics MCSG PSI, Protein Structure Initiative repository Initial release Version format compliance Version format compliance 1 0 2002-08-14 1 1 2008-04-27 1 2 2011-07-13 Y RCSB Y RCSB 2001-10-19 REL HOH water HOH 1 2 HOH HOH 200 A HOH 2 2 HOH HOH 201 A HOH 3 2 HOH HOH 202 A HOH 4 2 HOH HOH 203 A HOH 5 2 HOH HOH 204 A HOH 6 2 HOH HOH 205 A HOH 7 2 HOH HOH 206 A HOH 8 2 HOH HOH 207 A HOH 9 2 HOH HOH 208 A HOH 10 2 HOH HOH 209 A HOH 11 2 HOH HOH 210 A HOH 12 2 HOH HOH 211 A HOH 13 2 HOH HOH 212 A HOH 14 2 HOH HOH 213 A HOH 15 2 HOH HOH 214 A HOH 16 2 HOH HOH 215 A HOH 17 2 HOH HOH 216 A HOH 18 2 HOH HOH 217 A HOH 19 2 HOH HOH 218 A HOH 20 2 HOH HOH 219 A HOH 21 2 HOH HOH 220 A HOH 22 2 HOH HOH 221 A HOH 23 2 HOH HOH 222 A HOH 24 2 HOH HOH 223 A HOH 25 2 HOH HOH 224 A HOH 26 2 HOH HOH 225 A HOH 27 2 HOH HOH 226 A HOH 28 2 HOH HOH 227 A HOH 29 2 HOH HOH 228 A HOH 30 2 HOH HOH 229 A HOH 31 2 HOH HOH 230 A HOH 32 2 HOH HOH 231 A HOH 33 2 HOH HOH 232 A HOH 34 2 HOH HOH 233 A HOH 35 2 HOH HOH 234 A HOH 36 2 HOH HOH 235 A HOH 37 2 HOH HOH 236 A HOH 38 2 HOH HOH 237 A HOH 39 2 HOH HOH 238 A HOH 40 2 HOH HOH 239 A HOH 41 2 HOH HOH 240 A HOH 42 2 HOH HOH 241 A HOH 43 2 HOH HOH 242 A HOH 44 2 HOH HOH 243 A HOH 45 2 HOH HOH 244 A HOH 46 2 HOH HOH 245 A HOH 47 2 HOH HOH 246 A HOH 48 2 HOH HOH 247 A HOH 49 2 HOH HOH 248 A HOH 50 2 HOH HOH 249 A HOH 51 2 HOH HOH 250 A HOH 52 2 HOH HOH 251 A HOH 53 2 HOH HOH 252 A HOH 54 2 HOH HOH 253 A HOH 55 2 HOH HOH 254 A HOH 56 2 HOH HOH 255 A HOH 57 2 HOH HOH 256 A HOH 58 2 HOH HOH 257 A HOH 59 2 HOH HOH 258 A HOH 60 2 HOH HOH 259 A HOH 61 2 HOH HOH 260 A HOH 62 2 HOH HOH 261 A HOH 63 2 HOH HOH 262 A HOH 64 2 HOH HOH 263 A HOH 65 2 HOH HOH 264 A HOH 66 2 HOH HOH 265 A HOH 67 2 HOH HOH 266 A HOH 68 2 HOH HOH 267 A HOH 69 2 HOH HOH 268 A HOH 70 2 HOH HOH 269 A HOH 71 2 HOH HOH 270 A HOH 72 2 HOH HOH 271 A HOH 73 2 HOH HOH 272 A HOH 74 2 HOH HOH 273 A HOH 75 2 HOH HOH 274 A HOH 76 2 HOH HOH 275 A HOH 77 2 HOH HOH 276 A HOH 78 2 HOH HOH 277 A HOH 79 2 HOH HOH 278 A HOH 80 2 HOH HOH 279 A HOH 81 2 HOH HOH 280 A HOH 82 2 HOH HOH 281 A HOH 83 2 HOH HOH 282 A HOH 84 2 HOH HOH 283 A HOH 85 2 HOH HOH 284 A HOH 86 2 HOH HOH 285 A HOH 87 2 HOH HOH 286 A HOH 88 2 HOH HOH 287 A HOH 89 2 HOH HOH 288 A HOH 90 2 HOH HOH 289 A HOH 91 2 HOH HOH 290 A HOH 92 2 HOH HOH 291 A HOH 93 2 HOH HOH 292 A HOH 94 2 HOH HOH 293 A HOH 95 2 HOH HOH 294 A HOH 96 2 HOH HOH 295 A HOH 97 2 HOH HOH 296 A HOH 98 2 HOH HOH 297 A HOH 99 2 HOH HOH 298 A HOH 100 2 HOH HOH 299 A HOH 101 2 HOH HOH 300 A HOH 102 2 HOH HOH 301 A HOH 103 2 HOH HOH 302 A HOH 104 2 HOH HOH 303 A HOH 105 2 HOH HOH 304 A HOH 106 2 HOH HOH 305 A HOH 107 2 HOH HOH 306 A HOH 108 2 HOH HOH 307 A HOH 109 2 HOH HOH 308 A HOH 110 2 HOH HOH 309 A HOH 111 2 HOH HOH 310 A HOH 112 2 HOH HOH 311 A HOH 113 2 HOH HOH 312 A HOH 114 2 HOH HOH 313 A HOH 115 2 HOH HOH 314 A HOH 116 2 HOH HOH 315 A HOH 117 2 HOH HOH 316 A HOH 118 2 HOH HOH 317 A HOH 119 2 HOH HOH 318 A HOH 120 2 HOH HOH 319 A HOH 121 2 HOH HOH 320 A HOH 122 2 HOH HOH 321 A HOH 123 2 HOH HOH 322 A HOH 124 2 HOH HOH 323 A HOH 125 2 HOH HOH 324 A HOH 126 2 HOH HOH 325 A HOH 127 2 HOH HOH 326 A HOH 128 2 HOH HOH 327 A HOH 129 2 HOH HOH 328 A HOH 130 2 HOH HOH 329 A HOH 131 2 HOH HOH 330 A HOH 132 2 HOH HOH 331 A HOH 133 2 HOH HOH 332 A HOH 134 2 HOH HOH 333 A HOH 135 2 HOH HOH 334 A HOH 136 2 HOH HOH 335 A HOH 137 2 HOH HOH 336 A HOH 138 2 HOH HOH 337 A HOH 139 2 HOH HOH 338 A HOH 140 2 HOH HOH 339 A HOH 141 2 HOH HOH 340 A HOH 142 2 HOH HOH 341 A HOH 143 2 HOH HOH 342 A HOH 144 2 HOH HOH 343 A HOH 145 2 HOH HOH 344 A HOH 146 2 HOH HOH 345 A HOH 147 2 HOH HOH 346 A HOH 148 2 HOH HOH 347 A HOH 149 2 HOH HOH 348 A HOH 150 2 HOH HOH 349 A HOH 151 2 HOH HOH 350 A HOH 152 2 HOH HOH 351 A HOH 153 2 HOH HOH 352 A HOH 154 2 HOH HOH 353 A HOH 155 2 HOH HOH 354 A HOH 156 2 HOH HOH 355 A HOH 157 2 HOH HOH 356 A HOH 158 2 HOH HOH 357 A HOH 159 2 HOH HOH 358 A HOH 160 2 HOH HOH 359 A HOH 161 2 HOH HOH 360 A HOH 162 2 HOH HOH 361 A HOH 163 2 HOH HOH 362 A HOH 164 2 HOH HOH 363 A HOH 165 2 HOH HOH 364 A HOH 166 2 HOH HOH 365 A HOH 167 2 HOH HOH 366 A HOH 168 2 HOH HOH 367 A HOH 169 2 HOH HOH 368 A HOH 170 2 HOH HOH 369 A HOH 171 2 HOH HOH 370 A HOH 172 2 HOH HOH 371 A HOH 173 2 HOH HOH 372 A HOH 174 2 HOH HOH 373 A HOH 175 2 HOH HOH 374 A HOH 176 2 HOH HOH 375 A HOH 177 2 HOH HOH 376 A HOH 178 2 HOH HOH 377 A HOH 179 2 HOH HOH 378 A HOH 180 2 HOH HOH 379 A HOH 181 2 HOH HOH 380 A HOH 182 2 HOH HOH 381 A HOH 183 2 HOH HOH 382 A HOH 184 2 HOH HOH 383 A HOH 185 2 HOH HOH 384 A HOH 186 2 HOH HOH 385 A HOH 187 2 HOH HOH 386 A HOH 188 2 HOH HOH 387 A HOH 189 2 HOH HOH 388 A HOH 190 2 HOH HOH 389 A HOH 191 2 HOH HOH 390 A HOH 192 2 HOH HOH 391 A HOH 193 2 HOH HOH 392 A HOH 194 2 HOH HOH 393 A HOH 195 2 HOH HOH 394 A HOH 196 2 HOH HOH 395 A HOH 197 2 HOH HOH 396 A HOH 198 2 HOH HOH 397 A HOH 199 2 HOH HOH 398 A HOH 200 2 HOH HOH 399 A HOH 201 2 HOH HOH 400 A HOH 202 2 HOH HOH 401 A HOH 203 2 HOH HOH 402 A HOH 204 2 HOH HOH 403 A HOH 205 2 HOH HOH 404 A HOH 206 2 HOH HOH 405 A HOH 207 2 HOH HOH 406 A HOH 208 2 HOH HOH 407 A HOH 209 2 HOH HOH 408 A HOH 210 2 HOH HOH 409 A HOH 211 2 HOH HOH 410 A HOH 212 2 HOH HOH 411 A HOH 213 2 HOH HOH 412 A HOH 214 2 HOH HOH 413 A HOH 215 2 HOH HOH 414 A HOH 216 2 HOH HOH 415 A HOH 217 2 HOH HOH 416 A HOH 218 2 HOH HOH 417 A HOH 219 2 HOH HOH 418 A HOH 220 2 HOH HOH 419 A HOH 221 2 HOH HOH 420 A HOH 222 2 HOH HOH 421 A HOH 223 2 HOH HOH 422 A HOH 224 2 HOH HOH 423 A HOH 225 2 HOH HOH 424 A HOH 226 2 HOH HOH 425 A HOH 227 2 HOH HOH 426 A HOH 228 2 HOH HOH 427 A HOH 229 2 HOH HOH 428 A HOH 230 2 HOH HOH 429 A HOH 231 2 HOH HOH 430 A HOH 232 2 HOH HOH 431 A HOH 233 2 HOH HOH 432 A HOH 234 2 HOH HOH 433 A HOH 235 2 HOH HOH 434 A HOH 236 2 HOH HOH 435 A HOH 237 2 HOH HOH 436 A HOH 238 2 HOH HOH 437 A HOH 239 2 HOH HOH 438 A HOH 240 2 HOH HOH 439 A HOH 241 2 HOH HOH 440 A HOH 242 2 HOH HOH 441 A HOH 243 2 HOH HOH 442 A HOH 244 2 HOH HOH 443 A HOH 245 2 HOH HOH 444 A HOH 246 2 HOH HOH 445 A HOH 247 2 HOH HOH 446 A HOH 248 2 HOH HOH 447 A HOH 249 2 HOH HOH 448 A HOH 250 2 HOH HOH 449 A HOH 251 2 HOH HOH 450 A HOH 252 2 HOH HOH 451 A n 1 -21 A n 2 -20 A n 3 -19 A n 4 -18 A n 5 -17 A n 6 -16 A n 7 -15 A n 8 -14 A n 9 -13 A n 10 -12 A SER -11 n 11 SER -11 A SER -10 n 12 SER -10 A GLY -9 n 13 GLY -9 A ARG -8 n 14 ARG -8 A GLU -7 n 15 GLU -7 A ASN -6 n 16 ASN -6 A LEU -5 n 17 LEU -5 A TYR -4 n 18 TYR -4 A PHE -3 n 19 PHE -3 A n 20 -2 A n 21 -1 A HIS 0 n 22 HIS 0 A MSE 1 n 23 MSE 1 A GLN 2 n 24 GLN 2 A LYS 3 n 25 LYS 3 A VAL 4 n 26 VAL 4 A VAL 5 n 27 VAL 5 A LEU 6 n 28 LEU 6 A ALA 7 n 29 ALA 7 A THR 8 n 30 THR 8 A GLY 9 n 31 GLY 9 A ASN 10 n 32 ASN 10 A VAL 11 n 33 VAL 11 A GLY 12 n 34 GLY 12 A LYS 13 n 35 LYS 13 A VAL 14 n 36 VAL 14 A ARG 15 n 37 ARG 15 A GLU 16 n 38 GLU 16 A LEU 17 n 39 LEU 17 A ALA 18 n 40 ALA 18 A SER 19 n 41 SER 19 A LEU 20 n 42 LEU 20 A LEU 21 n 43 LEU 21 A SER 22 n 44 SER 22 A ASP 23 n 45 ASP 23 A PHE 24 n 46 PHE 24 A GLY 25 n 47 GLY 25 A LEU 26 n 48 LEU 26 A ASP 27 n 49 ASP 27 A ILE 28 n 50 ILE 28 A VAL 29 n 51 VAL 29 A ALA 30 n 52 ALA 30 A GLN 31 n 53 GLN 31 A THR 32 n 54 THR 32 A ASP 33 n 55 ASP 33 A LEU 34 n 56 LEU 34 A GLY 35 n 57 GLY 35 A VAL 36 n 58 VAL 36 A ASP 37 n 59 ASP 37 A SER 38 n 60 SER 38 A ALA 39 n 61 ALA 39 A GLU 40 n 62 GLU 40 A GLU 41 n 63 GLU 41 A THR 42 n 64 THR 42 A GLY 43 n 65 GLY 43 A LEU 44 n 66 LEU 44 A THR 45 n 67 THR 45 A PHE 46 n 68 PHE 46 A ILE 47 n 69 ILE 47 A GLU 48 n 70 GLU 48 A ASN 49 n 71 ASN 49 A ALA 50 n 72 ALA 50 A ILE 51 n 73 ILE 51 A LEU 52 n 74 LEU 52 A LYS 53 n 75 LYS 53 A ALA 54 n 76 ALA 54 A ARG 55 n 77 ARG 55 A HIS 56 n 78 HIS 56 A ALA 57 n 79 ALA 57 A ALA 58 n 80 ALA 58 A LYS 59 n 81 LYS 59 A VAL 60 n 82 VAL 60 A THR 61 n 83 THR 61 A ALA 62 n 84 ALA 62 A LEU 63 n 85 LEU 63 A PRO 64 n 86 PRO 64 A ALA 65 n 87 ALA 65 A ILE 66 n 88 ILE 66 A ALA 67 n 89 ALA 67 A ASP 68 n 90 ASP 68 A ASP 69 n 91 ASP 69 A SER 70 n 92 SER 70 A GLY 71 n 93 GLY 71 A LEU 72 n 94 LEU 72 A ALA 73 n 95 ALA 73 A VAL 74 n 96 VAL 74 A ASP 75 n 97 ASP 75 A VAL 76 n 98 VAL 76 A LEU 77 n 99 LEU 77 A GLY 78 n 100 GLY 78 A GLY 79 n 101 GLY 79 A ALA 80 n 102 ALA 80 A PRO 81 n 103 PRO 81 A GLY 82 n 104 GLY 82 A ILE 83 n 105 ILE 83 A TYR 84 n 106 TYR 84 A SER 85 n 107 SER 85 A ALA 86 n 108 ALA 86 A ARG 87 n 109 ARG 87 A TYR 88 n 110 TYR 88 A SER 89 n 111 SER 89 A GLY 90 n 112 GLY 90 A GLU 91 n 113 GLU 91 A ASP 92 n 114 ASP 92 A ALA 93 n 115 ALA 93 A THR 94 n 116 THR 94 A ASP 95 n 117 ASP 95 A GLN 96 n 118 GLN 96 A LYS 97 n 119 LYS 97 A ASN 98 n 120 ASN 98 A LEU 99 n 121 LEU 99 A GLN 100 n 122 GLN 100 A LYS 101 n 123 LYS 101 A LEU 102 n 124 LEU 102 A LEU 103 n 125 LEU 103 A GLU 104 n 126 GLU 104 A THR 105 n 127 THR 105 A MSE 106 n 128 MSE 106 A LYS 107 n 129 LYS 107 A ASP 108 n 130 ASP 108 A VAL 109 n 131 VAL 109 A PRO 110 n 132 PRO 110 A ASP 111 n 133 ASP 111 A ASP 112 n 134 ASP 112 A GLN 113 n 135 GLN 113 A ARG 114 n 136 ARG 114 A GLN 115 n 137 GLN 115 A ALA 116 n 138 ALA 116 A ARG 117 n 139 ARG 117 A PHE 118 n 140 PHE 118 A HIS 119 n 141 HIS 119 A CYS 120 n 142 CYS 120 A VAL 121 n 143 VAL 121 A LEU 122 n 144 LEU 122 A VAL 123 n 145 VAL 123 A TYR 124 n 146 TYR 124 A LEU 125 n 147 LEU 125 A ARG 126 n 148 ARG 126 A HIS 127 n 149 HIS 127 A ALA 128 n 150 ALA 128 A GLU 129 n 151 GLU 129 A ASP 130 n 152 ASP 130 A PRO 131 n 153 PRO 131 A THR 132 n 154 THR 132 A PRO 133 n 155 PRO 133 A LEU 134 n 156 LEU 134 A VAL 135 n 157 VAL 135 A CYS 136 n 158 CYS 136 A HIS 137 n 159 HIS 137 A GLY 138 n 160 GLY 138 A SER 139 n 161 SER 139 A TRP 140 n 162 TRP 140 A PRO 141 n 163 PRO 141 A GLY 142 n 164 GLY 142 A VAL 143 n 165 VAL 143 A ILE 144 n 166 ILE 144 A THR 145 n 167 THR 145 A ARG 146 n 168 ARG 146 A GLU 147 n 169 GLU 147 A PRO 148 n 170 PRO 148 A ALA 149 n 171 ALA 149 A GLY 150 n 172 GLY 150 A THR 151 n 173 THR 151 A GLY 152 n 174 GLY 152 A GLY 153 n 175 GLY 153 A PHE 154 n 176 PHE 154 A GLY 155 n 177 GLY 155 A TYR 156 n 178 TYR 156 A ASP 157 n 179 ASP 157 A PRO 158 n 180 PRO 158 A ILE 159 n 181 ILE 159 A PHE 160 n 182 PHE 160 A PHE 161 n 183 PHE 161 A VAL 162 n 184 VAL 162 A PRO 163 n 185 PRO 163 A SER 164 n 186 SER 164 A GLU 165 n 187 GLU 165 A GLY 166 n 188 GLY 166 A LYS 167 n 189 LYS 167 A THR 168 n 190 THR 168 A ALA 169 n 191 ALA 169 A ALA 170 n 192 ALA 170 A GLU 171 n 193 GLU 171 A LEU 172 n 194 LEU 172 A THR 173 n 195 THR 173 A ARG 174 n 196 ARG 174 A GLU 175 n 197 GLU 175 A GLU 176 n 198 GLU 176 A LYS 177 n 199 LYS 177 A SER 178 n 200 SER 178 A ALA 179 n 201 ALA 179 A ILE 180 n 202 ILE 180 A SER 181 n 203 SER 181 A HIS 182 n 204 HIS 182 A ARG 183 n 205 ARG 183 A GLY 184 n 206 GLY 184 A GLN 185 n 207 GLN 185 A ALA 186 n 208 ALA 186 A LEU 187 n 209 LEU 187 A LYS 188 n 210 LYS 188 A LEU 189 n 211 LEU 189 A LEU 190 n 212 LEU 190 A LEU 191 n 213 LEU 191 A ASP 192 n 214 ASP 192 A ALA 193 n 215 ALA 193 A LEU 194 n 216 LEU 194 A ARG 195 n 217 ARG 195 A ASN 196 n 218 ASN 196 A GLY 197 n 219 GLY 197 A n 220 198 A n 221 199 A author_defined_assembly 1 monomeric A MSE 1 SELENOMETHIONINE A MSE 23 MET A MSE 106 SELENOMETHIONINE A MSE 128 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O VAL 29 A O VAL 51 A N LEU 6 A N LEU 28 A N VAL 5 A N VAL 27 A O ILE 66 A O ILE 88 A N ALA 67 A N ALA 89 A O VAL 123 A O VAL 145 A N LEU 122 A N LEU 144 A O CYS 136 A O CYS 158 A N VAL 143 A N VAL 165 A O PHE 161 A O PHE 183 1 A OG SER -11 A OG SER 11 1 Y 1 A CG ARG -8 A CG ARG 14 1 Y 1 A CD ARG -8 A CD ARG 14 1 Y 1 A NE ARG -8 A NE ARG 14 1 Y 1 A CZ ARG -8 A CZ ARG 14 1 Y 1 A NH1 ARG -8 A NH1 ARG 14 1 Y 1 A NH2 ARG -8 A NH2 ARG 14 1 Y 1 A CB GLU -7 A CB GLU 15 1 Y 1 A CG GLU -7 A CG GLU 15 1 Y 1 A CD GLU -7 A CD GLU 15 1 Y 1 A OE1 GLU -7 A OE1 GLU 15 1 Y 1 A OE2 GLU -7 A OE2 GLU 15 1 Y 1 A CG LEU -5 A CG LEU 17 1 Y 1 A CD1 LEU -5 A CD1 LEU 17 1 Y 1 A CD2 LEU -5 A CD2 LEU 17 1 Y 1 A CG TYR -4 A CG TYR 18 1 Y 1 A CD1 TYR -4 A CD1 TYR 18 1 Y 1 A CD2 TYR -4 A CD2 TYR 18 1 Y 1 A CE1 TYR -4 A CE1 TYR 18 1 Y 1 A CE2 TYR -4 A CE2 TYR 18 1 Y 1 A CZ TYR -4 A CZ TYR 18 1 Y 1 A OH TYR -4 A OH TYR 18 1 Y 1 A CB PHE -3 A CB PHE 19 1 Y 1 A CG PHE -3 A CG PHE 19 1 Y 1 A CD1 PHE -3 A CD1 PHE 19 1 Y 1 A CD2 PHE -3 A CD2 PHE 19 1 Y 1 A CE1 PHE -3 A CE1 PHE 19 1 Y 1 A CE2 PHE -3 A CE2 PHE 19 1 Y 1 A CZ PHE -3 A CZ PHE 19 1 Y 1 A CB HIS 0 A CB HIS 22 1 Y 1 A CG HIS 0 A CG HIS 22 1 Y 1 A ND1 HIS 0 A ND1 HIS 22 1 Y 1 A CD2 HIS 0 A CD2 HIS 22 1 Y 1 A CE1 HIS 0 A CE1 HIS 22 1 Y 1 A NE2 HIS 0 A NE2 HIS 22 1 Y 1 A OG SER 22 A OG SER 44 1 Y 1 A CG ARG 174 A CG ARG 196 1 Y 1 A CD ARG 174 A CD ARG 196 1 Y 1 A NE ARG 174 A NE ARG 196 1 Y 1 A CZ ARG 174 A CZ ARG 196 1 Y 1 A NH1 ARG 174 A NH1 ARG 196 1 Y 1 A NH2 ARG 174 A NH2 ARG 196 1 Y 1 A CG LYS 188 A CG LYS 210 1 Y 1 A CD LYS 188 A CD LYS 210 1 Y 1 A CE LYS 188 A CE LYS 210 1 Y 1 A NZ LYS 188 A NZ LYS 210 1 Y 1 A MET -21 A MET 1 1 Y 1 A GLY -20 A GLY 2 1 Y 1 A SER -19 A SER 3 1 Y 1 A SER -18 A SER 4 1 Y 1 A HIS -17 A HIS 5 1 Y 1 A HIS -16 A HIS 6 1 Y 1 A HIS -15 A HIS 7 1 Y 1 A HIS -14 A HIS 8 1 Y 1 A HIS -13 A HIS 9 1 Y 1 A HIS -12 A HIS 10 1 Y 1 A GLN -2 A GLN 20 1 Y 1 A GLY -1 A GLY 21 1 Y 1 A GLY 198 A GLY 220 1 Y 1 A SER 199 A SER 221 1 Y 1 A A OE1 O GLN HOH 100 405 2.08 B 1 A A NZ O LYS HOH 107 286 2.12 1 A A HIS MSE 0 1 B B 147.19 1 29.60 2.70 111.00 140.60 A A A N CA C HIS HIS HIS 0 0 0 B B B N 1 5.44 0.90 118.30 123.74 A A A CB CG OD2 ASP ASP ASP 23 23 23 A A A N 1 -9.94 1.60 110.90 100.96 A A A CG1 CB CG2 VAL VAL VAL 29 29 29 A A N 1 6.34 0.90 118.30 124.64 A A A CB CG OD2 ASP ASP ASP 37 37 37 N 1 6.22 0.90 118.30 124.52 A A A CB CG OD2 ASP ASP ASP 69 69 69 N 1 5.80 0.90 118.30 124.10 A A A CB CG OD2 ASP ASP ASP 192 192 192 B B B N 1 A SER -10 -29.71 148.42 1 A GLU -7 111.18 -14.75 1 A LEU 194 B -69.32 39.54 1 A ARG 195 B -159.07 -23.61 16.815 -0.74 0.00 0.00 -0.74 0.00 1.47 used maximum likelihood method 0.2375100 0.2113500 0.2126100 1.500 55.09 1875 35524 5.1 92.68 2.585 0.098 0.087 RANDOM 1 THROUGHOUT 0 MAD 0.088 0.087 REFMAC defaults 1.500 55.09 255 1956 0 0 1701 0.767 1.176 2.125 2.895 0.2900000 0.2500000 1.539 127 2958 20 0.2570000 0.2290000 1.581 115 2859 20 0.2310000 0.2240000 1.627 123 2814 20 0.2480000 0.2150000 1.677 103 2698 20 0.2690000 0.2180000 1.732 121 2638 20 0.2620000 0.2230000 1.793 128 2540 20 0.2690000 0.2230000 1.860 99 2463 20 0.2640000 0.2200000 1.936 124 2376 20 0.3030000 0.2150000 2.022 113 2285 20 0.3030000 0.2190000 2.121 130 2210 20 0.2400000 0.2240000 2.235 102 2086 20 0.2220000 0.2130000 2.370 106 1978 20 0.2020000 0.2250000 2.534 90 1870 20 0.2440000 0.2190000 2.736 87 1751 20 0.2780000 0.2200000 2.997 76 1613 20 0.2300000 0.2290000 3.349 80 1482 20 0.2020000 0.2040000 3.865 66 1310 20 0.1690000 0.1790000 4.728 52 1131 20 0.2300000 0.2380000 6.663 36 897 20 0.3300000 0.2500000 55.902 18 550 20 1.45 60 1K7K 40104 40104 0 0.0600000 1,2 8.8 99.3 1.45 1.50 93.8 refinement CNS refinement REFMAC 5.0 data reduction d*TREK data reduction HKL-2000 data scaling HKL-2000 phasing CNS Hypothetical protein yggV crystal structure of RdgB- inosine triphosphate pyrophosphatase from E. coli 1 N N 2 N N Molecule is alongated, with dominant beta sheet extending throughout. There are additional beta strands at both ends of the beta sheet. Several alpha helices surround the ends of beta-sheet, leaving large groove on one side of the plane of the sheet. A ASN 10 A ASN 32 HELX_P A SER 22 A SER 44 1 1 13 A THR 45 A THR 67 HELX_P A ALA 62 A ALA 84 1 2 18 A VAL 76 A VAL 98 HELX_P A GLY 78 A GLY 100 5 3 3 A PRO 81 A PRO 103 HELX_P A SER 85 A SER 107 5 4 5 A THR 94 A THR 116 HELX_P A MSE 106 A MSE 128 1 5 13 A PRO 110 A PRO 132 HELX_P A GLN 113 A GLN 135 5 6 4 A TYR 156 A TYR 178 HELX_P A PRO 158 A PRO 180 5 7 3 A VAL 162 A VAL 184 HELX_P A GLY 166 A GLY 188 5 8 5 A THR 168 A THR 190 HELX_P A LEU 172 A LEU 194 5 9 5 A THR 173 A THR 195 HELX_P A SER 181 A SER 203 1 10 9 A SER 181 A SER 203 HELX_P A ASN 196 A ASN 218 1 11 16 covale 1.327 A A A HIS 0 A C HIS 22 1_555 A MSE 1 A N MSE 23 1_555 covale 1.318 B B A HIS 0 A C HIS 22 1_555 A MSE 1 A N MSE 23 1_555 covale 1.333 A A A MSE 1 A C MSE 23 1_555 A GLN 2 A N GLN 24 1_555 covale 1.331 B B A MSE 1 A C MSE 23 1_555 A GLN 2 A N GLN 24 1_555 covale 1.327 A THR 105 A C THR 127 1_555 A MSE 106 A N MSE 128 1_555 covale 1.328 A MSE 106 A C MSE 128 1_555 A LYS 107 A N LYS 129 1_555 STRUCTURAL GENOMICS, UNKNOWN FUNCTION MAD, His-tag, large groove, disordered Se-Met, structural genomics, Putative ribosomal protein, PSI, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, UNKNOWN FUNCTION A ALA 80 A ALA 102 1 A PRO 81 A PRO 103 -3.81 HAM1_ECOLI UNP 1 1 P52061 MQKVVLATGNVGKVRELASLLSDFGLDIVAQTDLGVDSAEETGLTFIENAILKARHAAKVTALPAIADDSGLAVDVLGGA PGIYSARYSGEDATDQKNLQKLLETMKDVPDDQRQARFHCVLVYLRHAEDPTPLVCHGSWPGVITREPAGTGGFGYDPIF FVPSEGKTAAELTREEKSAISHRGQALKLLLDALRNG 1 197 1K7K 1 197 P52061 A 1 23 219 1 EXPRESSION TAG MET -21 1K7K A P52061 UNP 1 1 EXPRESSION TAG GLY -20 1K7K A P52061 UNP 2 1 EXPRESSION TAG SER -19 1K7K A P52061 UNP 3 1 EXPRESSION TAG SER -18 1K7K A P52061 UNP 4 1 EXPRESSION TAG HIS -17 1K7K A P52061 UNP 5 1 EXPRESSION TAG HIS -16 1K7K A P52061 UNP 6 1 EXPRESSION TAG HIS -15 1K7K A P52061 UNP 7 1 EXPRESSION TAG HIS -14 1K7K A P52061 UNP 8 1 EXPRESSION TAG HIS -13 1K7K A P52061 UNP 9 1 EXPRESSION TAG HIS -12 1K7K A P52061 UNP 10 1 EXPRESSION TAG SER -11 1K7K A P52061 UNP 11 1 EXPRESSION TAG SER -10 1K7K A P52061 UNP 12 1 EXPRESSION TAG GLY -9 1K7K A P52061 UNP 13 1 EXPRESSION TAG ARG -8 1K7K A P52061 UNP 14 1 EXPRESSION TAG GLU -7 1K7K A P52061 UNP 15 1 EXPRESSION TAG ASN -6 1K7K A P52061 UNP 16 1 EXPRESSION TAG LEU -5 1K7K A P52061 UNP 17 1 EXPRESSION TAG TYR -4 1K7K A P52061 UNP 18 1 EXPRESSION TAG PHE -3 1K7K A P52061 UNP 19 1 EXPRESSION TAG GLN -2 1K7K A P52061 UNP 20 1 EXPRESSION TAG GLY -1 1K7K A P52061 UNP 21 1 EXPRESSION TAG HIS 0 1K7K A P52061 UNP 22 1 MET MODIFIED RESIDUE MSE 1 1K7K A P52061 UNP 1 23 1 MET MODIFIED RESIDUE MSE 106 1K7K A P52061 UNP 106 128 1 CLONING ARTIFACT GLY 198 1K7K A P52061 UNP 220 1 CLONING ARTIFACT SER 199 1K7K A P52061 UNP 221 6 parallel parallel anti-parallel anti-parallel anti-parallel A LEU 26 A LEU 48 A ALA 30 A ALA 52 A GLN 2 A GLN 24 A LEU 6 A LEU 28 A ALA 65 A ALA 87 A VAL 74 A VAL 96 A GLN 115 A GLN 137 A LEU 125 A LEU 147 A LEU 134 A LEU 156 A ILE 144 A ILE 166 A PHE 160 A PHE 182 A PHE 161 A PHE 183 96 P 43 21 2