0.022297
0.000000
0.008265
0.000000
0.010892
0.000000
0.000000
0.000000
0.023747
0.00000
0.00000
0.00000
Muraki, M.
Ishimura, M.
Harata, K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
110.34
90.00
44.850
91.810
44.910
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C6 H12 O6
180.156
beta-D-glucopyranose
beta-D-glucose; D-glucose; glucose
D-saccharide, beta linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C6 H12 O6
180.156
beta-D-galactopyranose
beta-D-galactose; D-galactose; galactose
D-saccharide, beta linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C8 H15 N O6
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE
D-saccharide, beta linking
C5 H7 N O3
129.114
n
PYROGLUTAMIC ACID
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
R
C
N
75
S
C
N
76
S
C
N
77
R
C
N
78
N
C
N
79
R
C
N
80
N
O
N
81
N
O
N
82
N
O
N
83
N
O
N
84
N
O
N
85
N
O
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
N
N
99
R
C
N
100
N
C
N
101
N
O
N
102
N
C
N
103
N
S
N
104
N
O
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
R
C
N
113
R
C
N
114
S
C
N
115
R
C
N
116
R
C
N
117
N
C
N
118
N
O
N
119
N
O
N
120
N
O
N
121
N
O
N
122
N
O
N
123
N
O
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
N
N
137
S
C
N
138
N
C
N
139
N
O
N
140
N
C
N
141
N
C
N
142
N
C
N
143
N
O
N
144
N
N
N
145
N
O
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
N
N
157
S
C
N
158
N
C
N
159
N
O
N
160
N
C
N
161
N
C
N
162
N
C
N
163
N
O
N
164
N
O
N
165
N
O
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
N
N
176
N
C
N
177
N
C
N
178
N
O
N
179
N
O
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
N
N
186
S
C
N
187
N
C
N
188
N
O
N
189
N
C
Y
190
N
C
Y
191
N
N
Y
192
N
C
Y
193
N
C
Y
194
N
N
N
195
N
O
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
O
N
207
N
H
N
208
N
H
N
209
N
N
N
210
S
C
N
211
N
C
N
212
N
O
N
213
S
C
N
214
N
C
N
215
N
C
N
216
N
C
N
217
N
O
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
N
N
232
S
C
N
233
N
C
N
234
N
O
N
235
N
C
N
236
N
C
N
237
N
C
N
238
N
C
N
239
N
O
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
N
N
254
S
C
N
255
N
C
N
256
N
O
N
257
N
C
N
258
N
C
N
259
N
C
N
260
N
C
N
261
N
N
N
262
N
O
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
N
N
279
S
C
N
280
N
C
N
281
N
O
N
282
N
C
N
283
N
C
N
284
N
S
N
285
N
C
N
286
N
O
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
R
C
N
299
R
C
N
300
R
C
N
301
S
C
N
302
R
C
N
303
N
C
N
304
N
C
N
305
N
C
N
306
N
N
N
307
N
O
N
308
N
O
N
309
N
O
N
310
N
O
N
311
N
O
N
312
N
O
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
N
N
329
S
C
N
330
N
C
N
331
N
C
N
332
N
C
N
333
N
O
N
334
N
C
N
335
N
O
N
336
N
O
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
N
N
345
S
C
N
346
N
C
N
347
N
O
N
348
N
C
Y
349
N
C
Y
350
N
C
Y
351
N
C
Y
352
N
C
Y
353
N
C
Y
354
N
C
N
355
N
O
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
N
N
368
S
C
N
369
N
C
N
370
N
O
N
371
N
C
N
372
N
C
N
373
N
C
N
374
N
O
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
N
N
385
S
C
N
386
N
C
N
387
N
O
N
388
N
C
N
389
N
O
N
390
N
O
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
N
N
399
S
C
N
400
N
C
N
401
N
O
N
402
R
C
N
403
N
O
N
404
N
C
N
405
N
O
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
N
N
416
S
C
N
417
N
C
N
418
N
O
N
419
N
C
Y
420
N
C
Y
421
N
C
Y
422
N
C
Y
423
N
N
Y
424
N
C
Y
425
N
C
Y
426
N
C
Y
427
N
C
Y
428
N
C
N
429
N
O
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
N
N
443
S
C
N
444
N
C
N
445
N
O
N
446
N
C
Y
447
N
C
Y
448
N
C
Y
449
N
C
Y
450
N
C
Y
451
N
C
Y
452
N
C
N
453
N
O
N
454
N
O
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
N
N
467
S
C
N
468
N
C
N
469
N
O
N
470
N
C
N
471
N
C
N
472
N
C
N
473
N
O
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
doub
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
doub
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
doub
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
doub
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
doub
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
Y
188
N
sing
Y
189
N
doub
Y
190
N
doub
N
191
N
sing
Y
192
N
sing
N
193
N
sing
Y
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
doub
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
doub
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
doub
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
doub
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
doub
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
doub
N
328
N
doub
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
doub
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
Y
342
N
doub
Y
343
N
sing
Y
344
N
sing
N
345
N
sing
Y
346
N
doub
N
347
N
sing
Y
348
N
doub
N
349
N
sing
Y
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
doub
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
doub
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
doub
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
doub
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
Y
411
N
doub
Y
412
N
sing
Y
413
N
sing
N
414
N
sing
Y
415
N
doub
Y
416
N
sing
Y
417
N
sing
N
418
N
sing
Y
419
N
sing
Y
420
N
doub
N
421
N
sing
Y
422
N
doub
N
423
N
sing
Y
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
doub
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
Y
439
N
doub
Y
440
N
sing
Y
441
N
sing
N
442
N
sing
Y
443
N
doub
N
444
N
sing
Y
445
N
doub
N
446
N
sing
Y
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
doub
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
NE
Biochim.Biophys.Acta
BBACAQ
0113
0006-3002
1569
10
20
10.1016/S0304-4165(01)00231-8
11853952
Interactions of wheat-germ agglutinin with GlcNAc beta 1,6Gal sequence
2002
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
51
1013
1019
10.1107/S0907444995004070
X-ray structure of wheat germ agglutinin isolectin 3
1995
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
297
673
681
10.1006/jmbi.2000.3594
Crystal structures of Urtica dioica agglutinin and its complex with tri-N-acetylchitotriose
2000
UK
Protein Eng.
PRENE9
0859
0269-2139
13
385
389
10.1093/protein/13.6.385
Chemically prepared hevein domains: effect of C-terminal truncation and the mutagenesis of aromatic residues on the affinity for chitin
2000
10.2210/pdb1k7v/pdb
pdb_00001k7v
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
AREA DETECTOR
2000-12-31
ENRAF-NONIUS FAST
GRAPHITE
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
ENRAF-NONIUS FR571
18752.932
agglutinin isolectin 3
2
nat
polymer
545.490
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-6)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
2
man
branched
18.015
water
120
nat
water
WGA3
no
yes
(PCA)RCGEQGSGMECPNNLCCSQYGYCGMGGDYCGKGCQNGACWTSKRCGSQAGGKTCPNNHCCSQYGHCGFGAEYCGA
GCQGGPCRADIKCGSQAGGKLCPNNLCCSQWGYCGLGSEFCGEGCQNGACSTDKPCGKDAGGRVCTNNYCCSKWGSCGIG
PGYCGAGCQSGGCDGVFAEAIATNSTLLAE
QRCGEQGSGMECPNNLCCSQYGYCGMGGDYCGKGCQNGACWTSKRCGSQAGGKTCPNNHCCSQYGHCGFGAEYCGAGCQG
GPCRADIKCGSQAGGKLCPNNLCCSQWGYCGLGSEFCGEGCQNGACSTDKPCGKDAGGRVCTNNYCCSKWGSCGIGPGYC
GAGCQSGGCDGVFAEAIATNSTLLAE
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
bread wheat
Triticum
sample
4565
Triticum aestivum
1
2.31
46.77
VAPOR DIFFUSION, SITTING DROP
4.9
sodium acetate, calcium chloride, Ethanol, pH 4.9, VAPOR DIFFUSION, SITTING DROP, temperature 298.0K
298.0
chem_comp
entity_poly
pdbx_struct_mod_residue
software
struct_conn
atom_site
chem_comp
entity
pdbx_branch_scheme
pdbx_chem_comp_identifier
pdbx_entity_branch
pdbx_entity_branch_descriptor
pdbx_entity_branch_link
pdbx_entity_branch_list
pdbx_entity_nonpoly
pdbx_nonpoly_scheme
pdbx_struct_assembly_gen
struct_asym
struct_conn
struct_site
struct_site_gen
chem_comp
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_conn
repository
Initial release
Carbohydrate remediation
repository
Remediation
Version format compliance
Derived calculations
Version format compliance
Data collection
Derived calculations
Polymer sequence
Refinement description
Atomic model
Data collection
Derived calculations
Structure summary
Data collection
Database references
Derived calculations
Refinement description
Structure summary
1
0
2002-04-03
1
1
2008-04-27
1
2
2011-07-13
2
0
2019-12-25
3
0
2020-07-29
3
1
2024-04-03
_chem_comp.type
_entity_poly.pdbx_seq_one_letter_code_can
_pdbx_struct_mod_residue.parent_comp_id
_struct_conn.pdbx_leaving_atom_flag
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.label_asym_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_entity_id
_atom_site.type_symbol
_chem_comp.name
_chem_comp.type
_pdbx_struct_assembly_gen.asym_id_list
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_leaving_atom_flag
A
BGC
189
n
C
BGC
1
A
GAL
188
n
C
GAL
2
A
NAG
187
n
C
NAG
3
B
BGC
189
n
D
BGC
1
B
GAL
188
n
D
GAL
2
B
NAG
187
n
D
NAG
3
DGlcpb
b-D-glucopyranose
b-D-Glcp
Glc
DGalpb
b-D-galactopyranose
b-D-Galp
Gal
DGlcpNAcb
N-acetyl-b-D-glucopyranosamine
b-D-GlcpNAc
GlcNAc
1WGT contains Wheat-germ-agglutinin 3 (WGA3)
1K7T contains crosslinked-WGA3/GlcNAcbeta1,6Gal complex
1K7U contains crosslinked-WGA3/GlcNAcbeta1,4GlcNAc complex
RCSB
Y
PDBJ
2001-10-22
REL
REL
oligosaccharide
DGlcpNAcb1-6DGalpb1-4DGlcpb1-ROH
2
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/3,3,2/[a2122h-1b_1-5][a2112h-1b_1-5][a2122h-1b_1-5_2*NCC/3=O]/1-2-3/a4-b1_b6-c1
2
PDB2Glycan
1.1.0
WURCS
[][b-D-Glcp]{[(4+1)][b-D-Galp]{[(6+1)][b-D-GlcpNAc]{}}}
2
PDB-CARE
LINUCS
C1
O4
GAL
BGC
2
1
2
O1
HO4
sing
C1
O6
NAG
GAL
3
2
2
O1
HO6
sing
n
n
n
HOH
water
Native WGA3
Other
experimental model
HOH
190
3
HOH
HOH
190
A
HOH
191
3
HOH
HOH
191
A
HOH
192
3
HOH
HOH
192
A
HOH
193
3
HOH
HOH
193
A
HOH
194
3
HOH
HOH
194
A
HOH
195
3
HOH
HOH
195
A
HOH
196
3
HOH
HOH
196
A
HOH
197
3
HOH
HOH
197
A
HOH
198
3
HOH
HOH
198
A
HOH
199
3
HOH
HOH
199
A
HOH
200
3
HOH
HOH
200
A
HOH
201
3
HOH
HOH
201
A
HOH
202
3
HOH
HOH
202
A
HOH
203
3
HOH
HOH
203
A
HOH
204
3
HOH
HOH
204
A
HOH
205
3
HOH
HOH
205
A
HOH
206
3
HOH
HOH
206
A
HOH
207
3
HOH
HOH
207
A
HOH
208
3
HOH
HOH
208
A
HOH
209
3
HOH
HOH
209
A
HOH
210
3
HOH
HOH
210
A
HOH
211
3
HOH
HOH
211
A
HOH
212
3
HOH
HOH
212
A
HOH
213
3
HOH
HOH
213
A
HOH
214
3
HOH
HOH
214
A
HOH
215
3
HOH
HOH
215
A
HOH
216
3
HOH
HOH
216
A
HOH
217
3
HOH
HOH
217
A
HOH
218
3
HOH
HOH
218
A
HOH
219
3
HOH
HOH
219
A
HOH
220
3
HOH
HOH
220
A
HOH
221
3
HOH
HOH
221
A
HOH
222
3
HOH
HOH
222
A
HOH
223
3
HOH
HOH
223
A
HOH
224
3
HOH
HOH
224
A
HOH
225
3
HOH
HOH
225
A
HOH
226
3
HOH
HOH
226
A
HOH
227
3
HOH
HOH
227
A
HOH
228
3
HOH
HOH
228
A
HOH
229
3
HOH
HOH
229
A
HOH
230
3
HOH
HOH
230
A
HOH
231
3
HOH
HOH
231
A
HOH
232
3
HOH
HOH
232
A
HOH
233
3
HOH
HOH
233
A
HOH
234
3
HOH
HOH
234
A
HOH
235
3
HOH
HOH
235
A
HOH
236
3
HOH
HOH
236
A
HOH
237
3
HOH
HOH
237
A
HOH
238
3
HOH
HOH
238
A
HOH
239
3
HOH
HOH
239
A
HOH
240
3
HOH
HOH
240
A
HOH
241
3
HOH
HOH
241
A
HOH
242
3
HOH
HOH
242
A
HOH
190
3
HOH
HOH
190
B
HOH
191
3
HOH
HOH
191
B
HOH
192
3
HOH
HOH
192
B
HOH
193
3
HOH
HOH
193
B
HOH
194
3
HOH
HOH
194
B
HOH
195
3
HOH
HOH
195
B
HOH
196
3
HOH
HOH
196
B
HOH
197
3
HOH
HOH
197
B
HOH
198
3
HOH
HOH
198
B
HOH
199
3
HOH
HOH
199
B
HOH
200
3
HOH
HOH
200
B
HOH
201
3
HOH
HOH
201
B
HOH
202
3
HOH
HOH
202
B
HOH
203
3
HOH
HOH
203
B
HOH
204
3
HOH
HOH
204
B
HOH
205
3
HOH
HOH
205
B
HOH
206
3
HOH
HOH
206
B
HOH
207
3
HOH
HOH
207
B
HOH
208
3
HOH
HOH
208
B
HOH
209
3
HOH
HOH
209
B
HOH
210
3
HOH
HOH
210
B
HOH
211
3
HOH
HOH
211
B
HOH
212
3
HOH
HOH
212
B
HOH
213
3
HOH
HOH
213
B
HOH
214
3
HOH
HOH
214
B
HOH
215
3
HOH
HOH
215
B
HOH
216
3
HOH
HOH
216
B
HOH
217
3
HOH
HOH
217
B
HOH
218
3
HOH
HOH
218
B
HOH
219
3
HOH
HOH
219
B
HOH
220
3
HOH
HOH
220
B
HOH
221
3
HOH
HOH
221
B
HOH
222
3
HOH
HOH
222
B
HOH
223
3
HOH
HOH
223
B
HOH
224
3
HOH
HOH
224
B
HOH
225
3
HOH
HOH
225
B
HOH
226
3
HOH
HOH
226
B
HOH
227
3
HOH
HOH
227
B
HOH
228
3
HOH
HOH
228
B
HOH
229
3
HOH
HOH
229
B
HOH
230
3
HOH
HOH
230
B
HOH
231
3
HOH
HOH
231
B
HOH
232
3
HOH
HOH
232
B
HOH
233
3
HOH
HOH
233
B
HOH
234
3
HOH
HOH
234
B
HOH
235
3
HOH
HOH
235
B
HOH
236
3
HOH
HOH
236
B
HOH
237
3
HOH
HOH
237
B
HOH
238
3
HOH
HOH
238
B
HOH
239
3
HOH
HOH
239
B
HOH
240
3
HOH
HOH
240
B
HOH
241
3
HOH
HOH
241
B
HOH
242
3
HOH
HOH
242
B
HOH
243
3
HOH
HOH
243
B
HOH
244
3
HOH
HOH
244
B
HOH
245
3
HOH
HOH
245
B
HOH
246
3
HOH
HOH
246
B
HOH
247
3
HOH
HOH
247
B
HOH
248
3
HOH
HOH
248
B
HOH
249
3
HOH
HOH
249
B
HOH
250
3
HOH
HOH
250
B
HOH
251
3
HOH
HOH
251
B
HOH
252
3
HOH
HOH
252
B
HOH
253
3
HOH
HOH
253
B
HOH
254
3
HOH
HOH
254
B
HOH
255
3
HOH
HOH
255
B
HOH
256
3
HOH
HOH
256
B
PCA
1
n
1
PCA
1
A
ARG
2
n
2
ARG
2
A
CYS
3
n
3
CYS
3
A
GLY
4
n
4
GLY
4
A
GLU
5
n
5
GLU
5
A
GLN
6
n
6
GLN
6
A
GLY
7
n
7
GLY
7
A
SER
8
n
8
SER
8
A
GLY
9
n
9
GLY
9
A
MET
10
n
10
MET
10
A
GLU
11
n
11
GLU
11
A
CYS
12
n
12
CYS
12
A
PRO
13
n
13
PRO
13
A
ASN
14
n
14
ASN
14
A
ASN
15
n
15
ASN
15
A
LEU
16
n
16
LEU
16
A
CYS
17
n
17
CYS
17
A
CYS
18
n
18
CYS
18
A
SER
19
n
19
SER
19
A
GLN
20
n
20
GLN
20
A
TYR
21
n
21
TYR
21
A
GLY
22
n
22
GLY
22
A
TYR
23
n
23
TYR
23
A
CYS
24
n
24
CYS
24
A
GLY
25
n
25
GLY
25
A
MET
26
n
26
MET
26
A
GLY
27
n
27
GLY
27
A
GLY
28
n
28
GLY
28
A
ASP
29
n
29
ASP
29
A
TYR
30
n
30
TYR
30
A
CYS
31
n
31
CYS
31
A
GLY
32
n
32
GLY
32
A
LYS
33
n
33
LYS
33
A
GLY
34
n
34
GLY
34
A
CYS
35
n
35
CYS
35
A
GLN
36
n
36
GLN
36
A
ASN
37
n
37
ASN
37
A
GLY
38
n
38
GLY
38
A
ALA
39
n
39
ALA
39
A
CYS
40
n
40
CYS
40
A
TRP
41
n
41
TRP
41
A
THR
42
n
42
THR
42
A
SER
43
n
43
SER
43
A
LYS
44
n
44
LYS
44
A
ARG
45
n
45
ARG
45
A
CYS
46
n
46
CYS
46
A
GLY
47
n
47
GLY
47
A
SER
48
n
48
SER
48
A
GLN
49
n
49
GLN
49
A
ALA
50
n
50
ALA
50
A
GLY
51
n
51
GLY
51
A
GLY
52
n
52
GLY
52
A
LYS
53
n
53
LYS
53
A
THR
54
n
54
THR
54
A
CYS
55
n
55
CYS
55
A
PRO
56
n
56
PRO
56
A
ASN
57
n
57
ASN
57
A
ASN
58
n
58
ASN
58
A
HIS
59
n
59
HIS
59
A
CYS
60
n
60
CYS
60
A
CYS
61
n
61
CYS
61
A
SER
62
n
62
SER
62
A
GLN
63
n
63
GLN
63
A
TYR
64
n
64
TYR
64
A
GLY
65
n
65
GLY
65
A
HIS
66
n
66
HIS
66
A
CYS
67
n
67
CYS
67
A
GLY
68
n
68
GLY
68
A
PHE
69
n
69
PHE
69
A
GLY
70
n
70
GLY
70
A
ALA
71
n
71
ALA
71
A
GLU
72
n
72
GLU
72
A
TYR
73
n
73
TYR
73
A
CYS
74
n
74
CYS
74
A
GLY
75
n
75
GLY
75
A
ALA
76
n
76
ALA
76
A
GLY
77
n
77
GLY
77
A
CYS
78
n
78
CYS
78
A
GLN
79
n
79
GLN
79
A
GLY
80
n
80
GLY
80
A
GLY
81
n
81
GLY
81
A
PRO
82
n
82
PRO
82
A
CYS
83
n
83
CYS
83
A
ARG
84
n
84
ARG
84
A
ALA
85
n
85
ALA
85
A
ASP
86
n
86
ASP
86
A
ILE
87
n
87
ILE
87
A
LYS
88
n
88
LYS
88
A
CYS
89
n
89
CYS
89
A
GLY
90
n
90
GLY
90
A
SER
91
n
91
SER
91
A
GLN
92
n
92
GLN
92
A
ALA
93
n
93
ALA
93
A
GLY
94
n
94
GLY
94
A
GLY
95
n
95
GLY
95
A
LYS
96
n
96
LYS
96
A
LEU
97
n
97
LEU
97
A
CYS
98
n
98
CYS
98
A
PRO
99
n
99
PRO
99
A
ASN
100
n
100
ASN
100
A
ASN
101
n
101
ASN
101
A
LEU
102
n
102
LEU
102
A
CYS
103
n
103
CYS
103
A
CYS
104
n
104
CYS
104
A
SER
105
n
105
SER
105
A
GLN
106
n
106
GLN
106
A
TRP
107
n
107
TRP
107
A
GLY
108
n
108
GLY
108
A
TYR
109
n
109
TYR
109
A
CYS
110
n
110
CYS
110
A
GLY
111
n
111
GLY
111
A
LEU
112
n
112
LEU
112
A
GLY
113
n
113
GLY
113
A
SER
114
n
114
SER
114
A
GLU
115
n
115
GLU
115
A
PHE
116
n
116
PHE
116
A
CYS
117
n
117
CYS
117
A
GLY
118
n
118
GLY
118
A
GLU
119
n
119
GLU
119
A
GLY
120
n
120
GLY
120
A
CYS
121
n
121
CYS
121
A
GLN
122
n
122
GLN
122
A
ASN
123
n
123
ASN
123
A
GLY
124
n
124
GLY
124
A
ALA
125
n
125
ALA
125
A
CYS
126
n
126
CYS
126
A
SER
127
n
127
SER
127
A
THR
128
n
128
THR
128
A
ASP
129
n
129
ASP
129
A
LYS
130
n
130
LYS
130
A
PRO
131
n
131
PRO
131
A
CYS
132
n
132
CYS
132
A
GLY
133
n
133
GLY
133
A
LYS
134
n
134
LYS
134
A
ASP
135
n
135
ASP
135
A
ALA
136
n
136
ALA
136
A
GLY
137
n
137
GLY
137
A
GLY
138
n
138
GLY
138
A
ARG
139
n
139
ARG
139
A
VAL
140
n
140
VAL
140
A
CYS
141
n
141
CYS
141
A
THR
142
n
142
THR
142
A
ASN
143
n
143
ASN
143
A
ASN
144
n
144
ASN
144
A
TYR
145
n
145
TYR
145
A
CYS
146
n
146
CYS
146
A
CYS
147
n
147
CYS
147
A
SER
148
n
148
SER
148
A
LYS
149
n
149
LYS
149
A
TRP
150
n
150
TRP
150
A
GLY
151
n
151
GLY
151
A
SER
152
n
152
SER
152
A
CYS
153
n
153
CYS
153
A
GLY
154
n
154
GLY
154
A
ILE
155
n
155
ILE
155
A
GLY
156
n
156
GLY
156
A
PRO
157
n
157
PRO
157
A
GLY
158
n
158
GLY
158
A
TYR
159
n
159
TYR
159
A
CYS
160
n
160
CYS
160
A
GLY
161
n
161
GLY
161
A
ALA
162
n
162
ALA
162
A
GLY
163
n
163
GLY
163
A
CYS
164
n
164
CYS
164
A
GLN
165
n
165
GLN
165
A
SER
166
n
166
SER
166
A
GLY
167
n
167
GLY
167
A
GLY
168
n
168
GLY
168
A
CYS
169
n
169
CYS
169
A
ASP
170
n
170
ASP
170
A
GLY
171
n
171
GLY
171
A
n
172
172
A
n
173
173
A
n
174
174
A
n
175
175
A
n
176
176
A
n
177
177
A
n
178
178
A
n
179
179
A
n
180
180
A
n
181
181
A
n
182
182
A
n
183
183
A
n
184
184
A
n
185
185
A
n
186
186
A
PCA
1
n
1
PCA
1
B
ARG
2
n
2
ARG
2
B
CYS
3
n
3
CYS
3
B
GLY
4
n
4
GLY
4
B
GLU
5
n
5
GLU
5
B
GLN
6
n
6
GLN
6
B
GLY
7
n
7
GLY
7
B
SER
8
n
8
SER
8
B
GLY
9
n
9
GLY
9
B
MET
10
n
10
MET
10
B
GLU
11
n
11
GLU
11
B
CYS
12
n
12
CYS
12
B
PRO
13
n
13
PRO
13
B
ASN
14
n
14
ASN
14
B
ASN
15
n
15
ASN
15
B
LEU
16
n
16
LEU
16
B
CYS
17
n
17
CYS
17
B
CYS
18
n
18
CYS
18
B
SER
19
n
19
SER
19
B
GLN
20
n
20
GLN
20
B
TYR
21
n
21
TYR
21
B
GLY
22
n
22
GLY
22
B
TYR
23
n
23
TYR
23
B
CYS
24
n
24
CYS
24
B
GLY
25
n
25
GLY
25
B
MET
26
n
26
MET
26
B
GLY
27
n
27
GLY
27
B
GLY
28
n
28
GLY
28
B
ASP
29
n
29
ASP
29
B
TYR
30
n
30
TYR
30
B
CYS
31
n
31
CYS
31
B
GLY
32
n
32
GLY
32
B
LYS
33
n
33
LYS
33
B
GLY
34
n
34
GLY
34
B
CYS
35
n
35
CYS
35
B
GLN
36
n
36
GLN
36
B
ASN
37
n
37
ASN
37
B
GLY
38
n
38
GLY
38
B
ALA
39
n
39
ALA
39
B
CYS
40
n
40
CYS
40
B
TRP
41
n
41
TRP
41
B
THR
42
n
42
THR
42
B
SER
43
n
43
SER
43
B
LYS
44
n
44
LYS
44
B
ARG
45
n
45
ARG
45
B
CYS
46
n
46
CYS
46
B
GLY
47
n
47
GLY
47
B
SER
48
n
48
SER
48
B
GLN
49
n
49
GLN
49
B
ALA
50
n
50
ALA
50
B
GLY
51
n
51
GLY
51
B
GLY
52
n
52
GLY
52
B
LYS
53
n
53
LYS
53
B
THR
54
n
54
THR
54
B
CYS
55
n
55
CYS
55
B
PRO
56
n
56
PRO
56
B
ASN
57
n
57
ASN
57
B
ASN
58
n
58
ASN
58
B
HIS
59
n
59
HIS
59
B
CYS
60
n
60
CYS
60
B
CYS
61
n
61
CYS
61
B
SER
62
n
62
SER
62
B
GLN
63
n
63
GLN
63
B
TYR
64
n
64
TYR
64
B
GLY
65
n
65
GLY
65
B
HIS
66
n
66
HIS
66
B
CYS
67
n
67
CYS
67
B
GLY
68
n
68
GLY
68
B
PHE
69
n
69
PHE
69
B
GLY
70
n
70
GLY
70
B
ALA
71
n
71
ALA
71
B
GLU
72
n
72
GLU
72
B
TYR
73
n
73
TYR
73
B
CYS
74
n
74
CYS
74
B
GLY
75
n
75
GLY
75
B
ALA
76
n
76
ALA
76
B
GLY
77
n
77
GLY
77
B
CYS
78
n
78
CYS
78
B
GLN
79
n
79
GLN
79
B
GLY
80
n
80
GLY
80
B
GLY
81
n
81
GLY
81
B
PRO
82
n
82
PRO
82
B
CYS
83
n
83
CYS
83
B
ARG
84
n
84
ARG
84
B
ALA
85
n
85
ALA
85
B
ASP
86
n
86
ASP
86
B
ILE
87
n
87
ILE
87
B
LYS
88
n
88
LYS
88
B
CYS
89
n
89
CYS
89
B
GLY
90
n
90
GLY
90
B
SER
91
n
91
SER
91
B
GLN
92
n
92
GLN
92
B
ALA
93
n
93
ALA
93
B
GLY
94
n
94
GLY
94
B
GLY
95
n
95
GLY
95
B
LYS
96
n
96
LYS
96
B
LEU
97
n
97
LEU
97
B
CYS
98
n
98
CYS
98
B
PRO
99
n
99
PRO
99
B
ASN
100
n
100
ASN
100
B
ASN
101
n
101
ASN
101
B
LEU
102
n
102
LEU
102
B
CYS
103
n
103
CYS
103
B
CYS
104
n
104
CYS
104
B
SER
105
n
105
SER
105
B
GLN
106
n
106
GLN
106
B
TRP
107
n
107
TRP
107
B
GLY
108
n
108
GLY
108
B
TYR
109
n
109
TYR
109
B
CYS
110
n
110
CYS
110
B
GLY
111
n
111
GLY
111
B
LEU
112
n
112
LEU
112
B
GLY
113
n
113
GLY
113
B
SER
114
n
114
SER
114
B
GLU
115
n
115
GLU
115
B
PHE
116
n
116
PHE
116
B
CYS
117
n
117
CYS
117
B
GLY
118
n
118
GLY
118
B
GLU
119
n
119
GLU
119
B
GLY
120
n
120
GLY
120
B
CYS
121
n
121
CYS
121
B
GLN
122
n
122
GLN
122
B
ASN
123
n
123
ASN
123
B
GLY
124
n
124
GLY
124
B
ALA
125
n
125
ALA
125
B
CYS
126
n
126
CYS
126
B
SER
127
n
127
SER
127
B
THR
128
n
128
THR
128
B
ASP
129
n
129
ASP
129
B
LYS
130
n
130
LYS
130
B
PRO
131
n
131
PRO
131
B
CYS
132
n
132
CYS
132
B
GLY
133
n
133
GLY
133
B
LYS
134
n
134
LYS
134
B
ASP
135
n
135
ASP
135
B
ALA
136
n
136
ALA
136
B
GLY
137
n
137
GLY
137
B
GLY
138
n
138
GLY
138
B
ARG
139
n
139
ARG
139
B
VAL
140
n
140
VAL
140
B
CYS
141
n
141
CYS
141
B
THR
142
n
142
THR
142
B
ASN
143
n
143
ASN
143
B
ASN
144
n
144
ASN
144
B
TYR
145
n
145
TYR
145
B
CYS
146
n
146
CYS
146
B
CYS
147
n
147
CYS
147
B
SER
148
n
148
SER
148
B
LYS
149
n
149
LYS
149
B
TRP
150
n
150
TRP
150
B
GLY
151
n
151
GLY
151
B
SER
152
n
152
SER
152
B
CYS
153
n
153
CYS
153
B
GLY
154
n
154
GLY
154
B
ILE
155
n
155
ILE
155
B
GLY
156
n
156
GLY
156
B
PRO
157
n
157
PRO
157
B
GLY
158
n
158
GLY
158
B
TYR
159
n
159
TYR
159
B
CYS
160
n
160
CYS
160
B
GLY
161
n
161
GLY
161
B
ALA
162
n
162
ALA
162
B
GLY
163
n
163
GLY
163
B
CYS
164
n
164
CYS
164
B
GLN
165
n
165
GLN
165
B
SER
166
n
166
SER
166
B
GLY
167
n
167
GLY
167
B
GLY
168
n
168
GLY
168
B
CYS
169
n
169
CYS
169
B
ASP
170
n
170
ASP
170
B
GLY
171
n
171
GLY
171
B
n
172
172
B
n
173
173
B
n
174
174
B
n
175
175
B
n
176
176
B
n
177
177
B
n
178
178
B
n
179
179
B
n
180
180
B
n
181
181
B
n
182
182
B
n
183
183
B
n
184
184
B
n
185
185
B
n
186
186
B
author_and_software_defined_assembly
PQS
2
dimeric
software_defined_assembly
PISA
2
dimeric
5530
-14
15440
A
PCA
1
PYROGLUTAMIC ACID
A
PCA
1
GLN
B
PCA
1
PYROGLUTAMIC ACID
B
PCA
1
GLN
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_554
x,y,z-1
crystal symmetry operation
15.6102820334
0.0000000000
-42.1097042834
A
N
CYS
17
A
N
CYS
17
A
O
GLY
25
A
O
GLY
25
A
N
CYS
60
A
N
CYS
60
A
O
GLY
68
A
O
GLY
68
A
N
CYS
103
A
N
CYS
103
A
O
GLY
111
A
O
GLY
111
A
N
CYS
146
A
N
CYS
146
A
O
GLY
154
A
O
GLY
154
B
N
CYS
17
B
N
CYS
17
B
O
GLY
25
B
O
GLY
25
B
N
CYS
60
B
N
CYS
60
B
O
GLY
68
B
O
GLY
68
B
N
CYS
103
B
N
CYS
103
B
O
GLY
111
B
O
GLY
111
B
N
CYS
146
B
N
CYS
146
B
O
GLY
154
B
O
GLY
154
1
A
VAL
172
A
VAL
172
1
Y
1
A
PHE
173
A
PHE
173
1
Y
1
A
ALA
174
A
ALA
174
1
Y
1
A
GLU
175
A
GLU
175
1
Y
1
A
ALA
176
A
ALA
176
1
Y
1
A
ILE
177
A
ILE
177
1
Y
1
A
ALA
178
A
ALA
178
1
Y
1
A
THR
179
A
THR
179
1
Y
1
A
ASN
180
A
ASN
180
1
Y
1
A
SER
181
A
SER
181
1
Y
1
A
THR
182
A
THR
182
1
Y
1
A
LEU
183
A
LEU
183
1
Y
1
A
LEU
184
A
LEU
184
1
Y
1
A
ALA
185
A
ALA
185
1
Y
1
A
GLU
186
A
GLU
186
1
Y
1
B
VAL
172
B
VAL
172
1
Y
1
B
PHE
173
B
PHE
173
1
Y
1
B
ALA
174
B
ALA
174
1
Y
1
B
GLU
175
B
GLU
175
1
Y
1
B
ALA
176
B
ALA
176
1
Y
1
B
ILE
177
B
ILE
177
1
Y
1
B
ALA
178
B
ALA
178
1
Y
1
B
THR
179
B
THR
179
1
Y
1
B
ASN
180
B
ASN
180
1
Y
1
B
SER
181
B
SER
181
1
Y
1
B
THR
182
B
THR
182
1
Y
1
B
LEU
183
B
LEU
183
1
Y
1
B
LEU
184
B
LEU
184
1
Y
1
B
ALA
185
B
ALA
185
1
Y
1
B
GLU
186
B
GLU
186
1
Y
1
A
PRO
82
-68.87
61.82
1
A
CYS
89
-170.76
-179.03
1
A
ALA
93
-143.62
42.05
1
A
ALA
125
-64.59
49.28
1
B
CYS
35
-36.38
126.00
1
B
ALA
39
-91.20
53.12
1
B
ALA
50
-112.71
52.77
1
B
CYS
78
-23.07
122.17
1
B
CYS
89
-171.83
-176.79
1
B
ALA
136
-141.93
10.40
1
B
ASN
143
53.99
18.39
1
B
SER
166
170.37
162.22
1
B
ASP
170
-109.01
-65.52
19.13
Average B-value are for protein atoms
0.31
0.232
2.2
8.0
1375
13756
10
random
1
2
MOLECULAR REPLACEMENT
Native WGA3
0.25
2.2
8.0
120
2540
74
0
2346
0.012
1.76
23.9
1.52
2.2
23.5
1K7V
33443
0
0.102
1
2.07
0.204
2.20
2.24
1
data collection
MADNESS
model building
X-PLOR
refinement
X-PLOR
3.1
data reduction
MADNESS
phasing
X-PLOR
Crystal Structure Analysis of crosslinked-WGA3/GlcNAcbeta1,6Galbeta1,4Glc
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
A
CYS
3
A
CYS
3
HELX_P
A
SER
8
A
SER
8
5
1
6
A
CYS
12
A
CYS
12
HELX_P
A
LEU
16
A
LEU
16
5
2
5
A
GLY
27
A
GLY
27
HELX_P
A
GLY
32
A
GLY
32
1
3
6
A
CYS
46
A
CYS
46
HELX_P
A
GLY
51
A
GLY
51
5
4
6
A
CYS
55
A
CYS
55
HELX_P
A
HIS
59
A
HIS
59
5
5
5
A
GLY
70
A
GLY
70
HELX_P
A
GLY
75
A
GLY
75
1
6
6
A
GLY
90
A
GLY
90
HELX_P
A
GLY
94
A
GLY
94
5
7
5
A
CYS
98
A
CYS
98
HELX_P
A
LEU
102
A
LEU
102
5
8
5
A
GLY
113
A
GLY
113
HELX_P
A
GLY
118
A
GLY
118
1
9
6
A
GLY
156
A
GLY
156
HELX_P
A
GLY
161
A
GLY
161
1
10
6
B
GLY
4
B
GLY
4
HELX_P
B
SER
8
B
SER
8
5
11
5
B
CYS
12
B
CYS
12
HELX_P
B
LEU
16
B
LEU
16
5
12
5
B
GLY
27
B
GLY
27
HELX_P
B
GLY
32
B
GLY
32
1
13
6
B
CYS
55
B
CYS
55
HELX_P
B
HIS
59
B
HIS
59
5
14
5
B
GLY
70
B
GLY
70
HELX_P
B
GLY
75
B
GLY
75
1
15
6
B
CYS
89
B
CYS
89
HELX_P
B
GLY
94
B
GLY
94
5
16
6
B
CYS
98
B
CYS
98
HELX_P
B
LEU
102
B
LEU
102
5
17
5
B
GLY
113
B
GLY
113
HELX_P
B
GLY
118
B
GLY
118
1
18
6
B
GLY
133
B
GLY
133
HELX_P
B
GLY
137
B
GLY
137
5
19
5
B
GLY
156
B
GLY
156
HELX_P
B
GLY
161
B
GLY
161
1
20
6
disulf
2.001
A
CYS
3
A
SG
CYS
3
1_555
A
CYS
18
A
SG
CYS
18
1_555
disulf
2.030
A
CYS
12
A
SG
CYS
12
1_555
A
CYS
24
A
SG
CYS
24
1_555
disulf
2.029
A
CYS
17
A
SG
CYS
17
1_555
A
CYS
31
A
SG
CYS
31
1_555
disulf
2.015
A
CYS
35
A
SG
CYS
35
1_555
A
CYS
40
A
SG
CYS
40
1_555
disulf
2.025
A
CYS
46
A
SG
CYS
46
1_555
A
CYS
61
A
SG
CYS
61
1_555
disulf
2.023
A
CYS
55
A
SG
CYS
55
1_555
A
CYS
67
A
SG
CYS
67
1_555
disulf
2.020
A
CYS
60
A
SG
CYS
60
1_555
A
CYS
74
A
SG
CYS
74
1_555
disulf
2.011
A
CYS
78
A
SG
CYS
78
1_555
A
CYS
83
A
SG
CYS
83
1_555
disulf
2.029
A
CYS
89
A
SG
CYS
89
1_555
A
CYS
104
A
SG
CYS
104
1_555
disulf
2.029
A
CYS
98
A
SG
CYS
98
1_555
A
CYS
110
A
SG
CYS
110
1_555
disulf
2.000
A
CYS
103
A
SG
CYS
103
1_555
A
CYS
117
A
SG
CYS
117
1_555
disulf
2.006
A
CYS
121
A
SG
CYS
121
1_555
A
CYS
126
A
SG
CYS
126
1_555
disulf
2.026
A
CYS
132
A
SG
CYS
132
1_555
A
CYS
147
A
SG
CYS
147
1_555
disulf
2.024
A
CYS
141
A
SG
CYS
141
1_555
A
CYS
153
A
SG
CYS
153
1_555
disulf
2.025
A
CYS
146
A
SG
CYS
146
1_555
A
CYS
160
A
SG
CYS
160
1_555
disulf
2.031
A
CYS
164
A
SG
CYS
164
1_555
A
CYS
169
A
SG
CYS
169
1_555
disulf
2.019
B
CYS
3
B
SG
CYS
3
1_555
B
CYS
18
B
SG
CYS
18
1_555
disulf
2.030
B
CYS
12
B
SG
CYS
12
1_555
B
CYS
24
B
SG
CYS
24
1_555
disulf
2.012
B
CYS
17
B
SG
CYS
17
1_555
B
CYS
31
B
SG
CYS
31
1_555
disulf
2.020
B
CYS
35
B
SG
CYS
35
1_555
B
CYS
40
B
SG
CYS
40
1_555
disulf
2.017
B
CYS
46
B
SG
CYS
46
1_555
B
CYS
61
B
SG
CYS
61
1_555
disulf
2.029
B
CYS
55
B
SG
CYS
55
1_555
B
CYS
67
B
SG
CYS
67
1_555
disulf
2.016
B
CYS
60
B
SG
CYS
60
1_555
B
CYS
74
B
SG
CYS
74
1_555
disulf
2.033
B
CYS
78
B
SG
CYS
78
1_555
B
CYS
83
B
SG
CYS
83
1_555
disulf
2.027
B
CYS
89
B
SG
CYS
89
1_555
B
CYS
104
B
SG
CYS
104
1_555
disulf
2.008
B
CYS
98
B
SG
CYS
98
1_555
B
CYS
110
B
SG
CYS
110
1_555
disulf
2.029
B
CYS
103
B
SG
CYS
103
1_555
B
CYS
117
B
SG
CYS
117
1_555
disulf
2.008
B
CYS
121
B
SG
CYS
121
1_555
B
CYS
126
B
SG
CYS
126
1_555
disulf
2.037
B
CYS
132
B
SG
CYS
132
1_555
B
CYS
147
B
SG
CYS
147
1_555
disulf
2.023
B
CYS
141
B
SG
CYS
141
1_555
B
CYS
153
B
SG
CYS
153
1_555
disulf
2.032
B
CYS
146
B
SG
CYS
146
1_555
B
CYS
160
B
SG
CYS
160
1_555
disulf
2.027
B
CYS
164
B
SG
CYS
164
1_555
B
CYS
169
B
SG
CYS
169
1_555
covale
1.334
both
A
PCA
1
A
C
PCA
1
1_555
A
ARG
2
A
N
ARG
2
1_555
covale
1.358
both
B
PCA
1
B
C
PCA
1
1_555
B
ARG
2
B
N
ARG
2
1_555
covale
1.391
both
C
BGC
1
C
O4
BGC
1_555
C
GAL
2
C
C1
GAL
1_555
covale
1.391
both
C
GAL
2
C
O6
GAL
1_555
C
NAG
3
C
C1
NAG
1_555
covale
1.402
both
D
BGC
1
D
O4
BGC
1_555
D
GAL
2
D
C1
GAL
1_555
covale
1.393
both
D
GAL
2
D
O6
GAL
1_555
D
NAG
3
D
C1
NAG
1_555
SUGAR BINDING PROTEIN
Hevein-type fold, SUGAR BINDING PROTEIN
AGI3_WHEAT
UNP
1
P10969
QRCGEQGSGMECPNNLCCSQYGYCGMGGDYCGKGCQNGACWTSKRCGSQAGGKTCPNNHCCSQYGHCGFGAEYCGAGCQG
GPCRADIKCGSQAGGKLCPNNLCCSQWGYCGLGSEFCGEGCQNGACSTDKPCGKDAGGRVCTNNYCCSKWGSCGIGPGYC
GAGCQSGGCDGVFAEAIATNSTLLAE
1
186
1K7V
1
186
P10969
A
1
1
186
1
186
1K7V
1
186
P10969
B
1
1
186
2
2
2
2
2
2
2
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
CYS
17
A
CYS
17
A
CYS
18
A
CYS
18
A
CYS
24
A
CYS
24
A
GLY
25
A
GLY
25
A
CYS
60
A
CYS
60
A
CYS
61
A
CYS
61
A
CYS
67
A
CYS
67
A
GLY
68
A
GLY
68
A
CYS
103
A
CYS
103
A
CYS
104
A
CYS
104
A
CYS
110
A
CYS
110
A
GLY
111
A
GLY
111
A
CYS
146
A
CYS
146
A
CYS
147
A
CYS
147
A
CYS
153
A
CYS
153
A
GLY
154
A
GLY
154
B
CYS
17
B
CYS
17
B
CYS
18
B
CYS
18
B
CYS
24
B
CYS
24
B
GLY
25
B
GLY
25
B
CYS
60
B
CYS
60
B
CYS
61
B
CYS
61
B
CYS
67
B
CYS
67
B
GLY
68
B
GLY
68
B
CYS
103
B
CYS
103
B
CYS
104
B
CYS
104
B
CYS
110
B
CYS
110
B
GLY
111
B
GLY
111
B
CYS
146
B
CYS
146
B
CYS
147
B
CYS
147
B
CYS
153
B
CYS
153
B
GLY
154
B
GLY
154
4
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