0.007193 0.004153 0.000000 0.000000 0.008305 0.000000 0.000000 0.000000 0.008865 0.00000 0.00000 0.00000 Scheffzek, K. Gruenewald, P. Wohlgemuth, S. Kabsch, W. Tu, H. Wigler, M. Wittinghofer, A. Herrmann, C. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 18 90.0 90.0 120.0 139.030 139.030 112.800 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C10 H17 N6 O13 P3 522.196 PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mg 2 24.305 MAGNESIUM ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N P N 138 N O N 139 N O N 140 N O N 141 N N N 142 R P N 143 N O N 144 N O N 145 N O N 146 S P N 147 N O N 148 N O N 149 N O N 150 N C N 151 R C N 152 N O N 153 S C N 154 N O N 155 R C N 156 N O N 157 R C Y 158 N N Y 159 N C Y 160 N N Y 161 N C Y 162 N C N 163 N O Y 164 N N Y 165 N C N 166 N N Y 167 N N Y 168 N C N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N N N 187 S C N 188 N C N 189 N O N 190 N C Y 191 N C Y 192 N N Y 193 N C Y 194 N C Y 195 N N N 196 N O N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N N N 208 S C N 209 N C N 210 N O N 211 S C N 212 N C N 213 N C N 214 N C N 215 N O N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N N N 230 S C N 231 N C N 232 N O N 233 N C N 234 N C N 235 N C N 236 N C N 237 N O N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N N N 252 S C N 253 N C N 254 N O N 255 N C N 256 N C N 257 N C N 258 N C N 259 N N N 260 N O N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N N N 277 S C N 278 N C N 279 N O N 280 N C N 281 N C N 282 N S N 283 N C N 284 N O N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N MG N 297 N N N 298 S C N 299 N C N 300 N O N 301 N C Y 302 N C Y 303 N C Y 304 N C Y 305 N C Y 306 N C Y 307 N C N 308 N O N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N N N 321 S C N 322 N C N 323 N O N 324 N C N 325 N C N 326 N C N 327 N O N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N N N 338 S C N 339 N C N 340 N O N 341 N C N 342 N O N 343 N O N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N N N 352 S C N 353 N C N 354 N O N 355 R C N 356 N O N 357 N C N 358 N O N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N N N 369 S C N 370 N C N 371 N O N 372 N C Y 373 N C Y 374 N C Y 375 N C Y 376 N N Y 377 N C Y 378 N C Y 379 N C Y 380 N C Y 381 N C N 382 N O N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N N N 396 S C N 397 N C N 398 N O N 399 N C Y 400 N C Y 401 N C Y 402 N C Y 403 N C Y 404 N C Y 405 N C N 406 N O N 407 N O N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N N N 420 S C N 421 N C N 422 N O N 423 N C N 424 N C N 425 N C N 426 N O N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N doub N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N doub N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N doub N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing Y 164 N sing Y 165 N sing Y 166 N doub N 167 N sing Y 168 N sing Y 169 N sing Y 170 N doub N 171 N doub Y 172 N sing Y 173 N sing N 174 N sing N 175 N sing Y 176 N doub N 177 N sing N 178 N sing Y 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing Y 191 N sing Y 192 N doub Y 193 N doub N 194 N sing Y 195 N sing N 196 N sing Y 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N doub N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N doub N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N doub N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N doub N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N doub N 293 N sing N 294 N sing N 295 N sing N 296 N sing Y 297 N doub Y 298 N sing Y 299 N sing N 300 N sing Y 301 N doub N 302 N sing Y 303 N doub N 304 N sing Y 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N doub N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N doub N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N doub N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N doub N 362 N sing N 363 N sing N 364 N sing N 365 N sing Y 366 N doub Y 367 N sing Y 368 N sing N 369 N sing Y 370 N doub Y 371 N sing Y 372 N sing N 373 N sing Y 374 N sing Y 375 N doub N 376 N sing Y 377 N doub N 378 N sing Y 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N doub N 390 N sing N 391 N sing N 392 N sing N 393 N sing Y 394 N doub Y 395 N sing Y 396 N sing N 397 N sing Y 398 N doub N 399 N sing Y 400 N doub N 401 N sing Y 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N doub N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing UK Structure STRUE6 2005 0969-2126 9 1043 1050 10.1016/S0969-2126(01)00674-8 11709168 The Ras-Byr2RBD complex: structural basis for Ras effector recognition in yeast. 2001 10.2210/pdb1k8r/pdb pdb_00001k8r 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 290 1 mirrors AREA DETECTOR 1996-08-06 SIEMENS-NICOLET Ni Mirror SINGLE WAVELENGTH M x-ray 1 1.54 1.0 1.54 ROTATING ANODE ELLIOTT GX-18 18875.191 Transforming protein P21/H-RAS-1 GTP-binding/catalytic domain, residues 1-166 1 man polymer 12426.270 Protein kinase byr2 2.7.1.- Ras binding domain (RBD), residues 71-180 1 man polymer 24.305 MAGNESIUM ION 1 syn non-polymer 522.196 PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER 1 syn non-polymer no no MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLC VFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLV REIRQH MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLC VFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLV REIRQH A polypeptide(L) no no CILRFIACNGQTRAVQSRGDYQKTLAIALKKFSLEDASKFIVCVSQSSRIKLITEEEFKQICFNSSSPERDRLIIVPKEK PCPSFEDLRRSWEIELAQPAALSSQSSLSP CILRFIACNGQTRAVQSRGDYQKTLAIALKKFSLEDASKFIVCVSQSSRIKLITEEEFKQICFNSSSPERDRLIIVPKEK PCPSFEDLRRSWEIELAQPAALSSQSSLSP B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia sample Hras or Hras1 9606 Homo sapiens 562 Escherichia coli CK600K Plasmid pGEX-2T fission yeast Schizosaccharomyces Escherichia Escherichia coli sample BYR2 or STE8 or SPBC1D7.05 4896 Schizosaccharomyces pombe 511693 Escherichia coli BL21 BL21 Plasmid pGEX-2T 4 3.35 63.29 VAPOR DIFFUSION, HANGING DROP 8 PEG 3350, pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 290K 290 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_struct_conn_angle software struct_conn struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations Refinement description 1 0 2002-03-13 1 1 2008-04-27 1 2 2011-07-13 1 3 2023-08-16 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _software.name _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Crystal Structure Of Rap. Gmppnp In Complex With The Ras- Binding-Domain Of C-Raf1 Kinase (Rafrbd). Crystal Structure Of The Active Ras Protein Complexed With The Ras-Interacting Domain Of Ralgds Ras G12V - 3-Kinase Complex RCSB Y RCSB 2001-10-25 REL REL MG MAGNESIUM ION GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER 5P21 PDB entry 5p21 PDB experimental model MG 168 3 MG MG 168 A GNP 167 4 GNP GNP 167 A MET 1 n 1 MET 1 A THR 2 n 2 THR 2 A GLU 3 n 3 GLU 3 A TYR 4 n 4 TYR 4 A LYS 5 n 5 LYS 5 A LEU 6 n 6 LEU 6 A VAL 7 n 7 VAL 7 A VAL 8 n 8 VAL 8 A VAL 9 n 9 VAL 9 A GLY 10 n 10 GLY 10 A ALA 11 n 11 ALA 11 A GLY 12 n 12 GLY 12 A GLY 13 n 13 GLY 13 A VAL 14 n 14 VAL 14 A GLY 15 n 15 GLY 15 A LYS 16 n 16 LYS 16 A SER 17 n 17 SER 17 A ALA 18 n 18 ALA 18 A LEU 19 n 19 LEU 19 A THR 20 n 20 THR 20 A ILE 21 n 21 ILE 21 A GLN 22 n 22 GLN 22 A LEU 23 n 23 LEU 23 A ILE 24 n 24 ILE 24 A GLN 25 n 25 GLN 25 A ASN 26 n 26 ASN 26 A HIS 27 n 27 HIS 27 A PHE 28 n 28 PHE 28 A VAL 29 n 29 VAL 29 A ASP 30 n 30 ASP 30 A GLU 31 n 31 GLU 31 A TYR 32 n 32 TYR 32 A ASP 33 n 33 ASP 33 A PRO 34 n 34 PRO 34 A THR 35 n 35 THR 35 A ILE 36 n 36 ILE 36 A GLU 37 n 37 GLU 37 A ASP 38 n 38 ASP 38 A SER 39 n 39 SER 39 A TYR 40 n 40 TYR 40 A ARG 41 n 41 ARG 41 A LYS 42 n 42 LYS 42 A GLN 43 n 43 GLN 43 A VAL 44 n 44 VAL 44 A VAL 45 n 45 VAL 45 A ILE 46 n 46 ILE 46 A ASP 47 n 47 ASP 47 A GLY 48 n 48 GLY 48 A GLU 49 n 49 GLU 49 A THR 50 n 50 THR 50 A CYS 51 n 51 CYS 51 A LEU 52 n 52 LEU 52 A LEU 53 n 53 LEU 53 A ASP 54 n 54 ASP 54 A ILE 55 n 55 ILE 55 A LEU 56 n 56 LEU 56 A ASP 57 n 57 ASP 57 A THR 58 n 58 THR 58 A ALA 59 n 59 ALA 59 A GLY 60 n 60 GLY 60 A GLN 61 n 61 GLN 61 A GLU 62 n 62 GLU 62 A GLU 63 n 63 GLU 63 A TYR 64 n 64 TYR 64 A SER 65 n 65 SER 65 A ALA 66 n 66 ALA 66 A ALA 67 n 67 MET 67 A ARG 68 n 68 ARG 68 A ASP 69 n 69 ASP 69 A GLN 70 n 70 GLN 70 A TYR 71 n 71 TYR 71 A MET 72 n 72 MET 72 A ARG 73 n 73 ARG 73 A THR 74 n 74 THR 74 A GLY 75 n 75 GLY 75 A GLU 76 n 76 GLU 76 A GLY 77 n 77 GLY 77 A PHE 78 n 78 PHE 78 A LEU 79 n 79 LEU 79 A CYS 80 n 80 CYS 80 A VAL 81 n 81 VAL 81 A PHE 82 n 82 PHE 82 A ALA 83 n 83 ALA 83 A ILE 84 n 84 ILE 84 A ASN 85 n 85 ASN 85 A ASN 86 n 86 ASN 86 A THR 87 n 87 THR 87 A LYS 88 n 88 LYS 88 A SER 89 n 89 SER 89 A PHE 90 n 90 PHE 90 A GLU 91 n 91 GLU 91 A ASP 92 n 92 ASP 92 A ILE 93 n 93 ILE 93 A HIS 94 n 94 HIS 94 A GLN 95 n 95 GLN 95 A TYR 96 n 96 TYR 96 A ARG 97 n 97 ARG 97 A GLU 98 n 98 GLU 98 A GLN 99 n 99 GLN 99 A ILE 100 n 100 ILE 100 A LYS 101 n 101 LYS 101 A ARG 102 n 102 ARG 102 A VAL 103 n 103 VAL 103 A LYS 104 n 104 LYS 104 A ASP 105 n 105 ASP 105 A SER 106 n 106 SER 106 A ASP 107 n 107 ASP 107 A ASP 108 n 108 ASP 108 A VAL 109 n 109 VAL 109 A PRO 110 n 110 PRO 110 A MET 111 n 111 MET 111 A VAL 112 n 112 VAL 112 A LEU 113 n 113 LEU 113 A VAL 114 n 114 VAL 114 A GLY 115 n 115 GLY 115 A ASN 116 n 116 ASN 116 A LYS 117 n 117 LYS 117 A CYS 118 n 118 CYS 118 A ASP 119 n 119 ASP 119 A LEU 120 n 120 LEU 120 A ALA 121 n 121 ALA 121 A ALA 122 n 122 ALA 122 A ARG 123 n 123 ARG 123 A THR 124 n 124 THR 124 A VAL 125 n 125 VAL 125 A GLU 126 n 126 GLU 126 A SER 127 n 127 SER 127 A ARG 128 n 128 ARG 128 A GLN 129 n 129 GLN 129 A ALA 130 n 130 ALA 130 A GLN 131 n 131 GLN 131 A ASP 132 n 132 ASP 132 A LEU 133 n 133 LEU 133 A ALA 134 n 134 ALA 134 A ARG 135 n 135 ARG 135 A SER 136 n 136 SER 136 A TYR 137 n 137 TYR 137 A GLY 138 n 138 GLY 138 A ILE 139 n 139 ILE 139 A PRO 140 n 140 PRO 140 A TYR 141 n 141 TYR 141 A ILE 142 n 142 ILE 142 A GLU 143 n 143 GLU 143 A THR 144 n 144 THR 144 A SER 145 n 145 SER 145 A ALA 146 n 146 ALA 146 A LYS 147 n 147 LYS 147 A THR 148 n 148 THR 148 A ARG 149 n 149 ARG 149 A GLN 150 n 150 GLN 150 A GLY 151 n 151 GLY 151 A VAL 152 n 152 VAL 152 A GLU 153 n 153 GLU 153 A ASP 154 n 154 ASP 154 A ALA 155 n 155 ALA 155 A PHE 156 n 156 PHE 156 A TYR 157 n 157 TYR 157 A THR 158 n 158 THR 158 A LEU 159 n 159 LEU 159 A VAL 160 n 160 VAL 160 A ARG 161 n 161 ARG 161 A GLU 162 n 162 GLU 162 A ILE 163 n 163 ILE 163 A ARG 164 n 164 ARG 164 A GLN 165 n 165 GLN 165 A HIS 166 n 166 HIS 166 A CYS 71 n 1 CYS 71 B ILE 72 n 2 ILE 72 B LEU 73 n 3 LEU 73 B ARG 74 n 4 ARG 74 B PHE 75 n 5 PHE 75 B ILE 76 n 6 ILE 76 B ALA 77 n 7 ALA 77 B CYS 78 n 8 CYS 78 B ASN 79 n 9 ASN 79 B GLY 80 n 10 GLY 80 B GLN 81 n 11 GLN 81 B THR 82 n 12 THR 82 B ARG 83 n 13 ARG 83 B ALA 84 n 14 ALA 84 B VAL 85 n 15 VAL 85 B GLN 86 n 16 GLN 86 B SER 87 n 17 SER 87 B ARG 88 n 18 ARG 88 B GLY 89 n 19 GLY 89 B ASP 90 n 20 ASP 90 B TYR 91 n 21 TYR 91 B GLN 92 n 22 GLN 92 B LYS 93 n 23 LYS 93 B THR 94 n 24 THR 94 B LEU 95 n 25 LEU 95 B ALA 96 n 26 ALA 96 B ILE 97 n 27 ILE 97 B ALA 98 n 28 ALA 98 B LEU 99 n 29 LEU 99 B LYS 100 n 30 LYS 100 B LYS 101 n 31 LYS 101 B PHE 102 n 32 PHE 102 B SER 103 n 33 SER 103 B LEU 104 n 34 LEU 104 B GLU 105 n 35 GLU 105 B ASP 106 n 36 ASP 106 B ALA 107 n 37 ALA 107 B SER 108 n 38 SER 108 B LYS 109 n 39 LYS 109 B PHE 110 n 40 PHE 110 B ILE 111 n 41 ILE 111 B VAL 112 n 42 VAL 112 B CYS 113 n 43 CYS 113 B VAL 114 n 44 VAL 114 B SER 115 n 45 SER 115 B GLN 116 n 46 GLN 116 B SER 117 n 47 SER 117 B SER 118 n 48 SER 118 B ARG 119 n 49 ARG 119 B ALA 120 n 50 ILE 120 B LYS 121 n 51 LYS 121 B LEU 122 n 52 LEU 122 B ILE 123 n 53 ILE 123 B THR 124 n 54 THR 124 B GLU 125 n 55 GLU 125 B GLU 126 n 56 GLU 126 B n 57 127 B n 58 128 B n 59 129 B n 60 130 B n 61 131 B n 62 132 B n 63 133 B n 64 134 B n 65 135 B n 66 136 B n 67 137 B n 68 138 B n 69 139 B ARG 140 n 70 ARG 140 B ASP 141 n 71 ASP 141 B ARG 142 n 72 ARG 142 B LEU 143 n 73 LEU 143 B ILE 144 n 74 ILE 144 B ILE 145 n 75 ILE 145 B VAL 146 n 76 VAL 146 B PRO 147 n 77 PRO 147 B LYS 148 n 78 LYS 148 B GLU 149 n 79 GLU 149 B LYS 150 n 80 LYS 150 B PRO 151 n 81 PRO 151 B CYS 152 n 82 CYS 152 B PRO 153 n 83 PRO 153 B SER 154 n 84 SER 154 B PHE 155 n 85 PHE 155 B GLU 156 n 86 GLU 156 B ASP 157 n 87 ASP 157 B LEU 158 n 88 LEU 158 B ARG 159 n 89 ARG 159 B ARG 160 n 90 ARG 160 B SER 161 n 91 SER 161 B TRP 162 n 92 TRP 162 B GLU 163 n 93 GLU 163 B ILE 164 n 94 ILE 164 B GLU 165 n 95 GLU 165 B n 96 166 B n 97 167 B n 98 168 B n 99 169 B n 100 170 B n 101 171 B n 102 172 B n 103 173 B n 104 174 B n 105 175 B n 106 176 B n 107 177 B n 108 178 B n 109 179 B n 110 180 B author_defined_assembly 2 dimeric A SER 17 A OG SER 17 1_555 A MG 168 C MG MG 1_555 A THR 35 A OG1 THR 35 1_555 53.6 A SER 17 A OG SER 17 1_555 A MG 168 C MG MG 1_555 A ASP 57 A OD1 ASP 57 1_555 85.3 A THR 35 A OG1 THR 35 1_555 A MG 168 C MG MG 1_555 A ASP 57 A OD1 ASP 57 1_555 108.1 A SER 17 A OG SER 17 1_555 A MG 168 C MG MG 1_555 A THR 58 A O THR 58 1_555 154.2 A THR 35 A OG1 THR 35 1_555 A MG 168 C MG MG 1_555 A THR 58 A O THR 58 1_555 104.8 A ASP 57 A OD1 ASP 57 1_555 A MG 168 C MG MG 1_555 A THR 58 A O THR 58 1_555 89.5 A SER 17 A OG SER 17 1_555 A MG 168 C MG MG 1_555 A GNP 167 D O2B GNP 1_555 53.7 A THR 35 A OG1 THR 35 1_555 A MG 168 C MG MG 1_555 A GNP 167 D O2B GNP 1_555 86.7 A ASP 57 A OD1 ASP 57 1_555 A MG 168 C MG MG 1_555 A GNP 167 D O2B GNP 1_555 115.5 A THR 58 A O THR 58 1_555 A MG 168 C MG MG 1_555 A GNP 167 D O2B GNP 1_555 148.2 A SER 17 A OG SER 17 1_555 A MG 168 C MG MG 1_555 A GNP 167 D O2G GNP 1_555 78.2 A THR 35 A OG1 THR 35 1_555 A MG 168 C MG MG 1_555 A GNP 167 D O2G GNP 1_555 55.5 A ASP 57 A OD1 ASP 57 1_555 A MG 168 C MG MG 1_555 A GNP 167 D O2G GNP 1_555 161.8 A THR 58 A O THR 58 1_555 A MG 168 C MG MG 1_555 A GNP 167 D O2G GNP 1_555 101.9 A GNP 167 D O2B GNP 1_555 A MG 168 C MG MG 1_555 A GNP 167 D O2G GNP 1_555 60.0 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O ILE 142 A O ILE 142 A N GLY 115 A N GLY 115 A O VAL 114 A O VAL 114 A N CYS 80 A N CYS 80 A O VAL 81 A O VAL 81 A N VAL 9 A N VAL 9 A N LEU 6 A N LEU 6 A O LEU 56 A O LEU 56 A O ASP 57 A O ASP 57 A N ASP 38 A N ASP 38 A N SER 39 A N SER 39 B O THR 82 B O THR 12 B O ARG 83 B O ARG 13 B N PHE 75 B N PHE 5 B N ILE 76 B N ILE 6 B O LEU 143 B O LEU 73 B O VAL 146 B O VAL 76 B N ILE 111 B N ILE 41 B N VAL 114 B N VAL 44 B O LYS 121 B O LYS 51 1 A CG MET 67 A CG MET 67 1 Y 1 A SD MET 67 A SD MET 67 1 Y 1 A CE MET 67 A CE MET 67 1 Y 1 B CG1 ILE 120 B CG1 ILE 50 1 Y 1 B CG2 ILE 120 B CG2 ILE 50 1 Y 1 B CD1 ILE 120 B CD1 ILE 50 1 Y 1 B GLU 127 B GLU 57 1 Y 1 B PHE 128 B PHE 58 1 Y 1 B LYS 129 B LYS 59 1 Y 1 B GLN 130 B GLN 60 1 Y 1 B ILE 131 B ILE 61 1 Y 1 B CYS 132 B CYS 62 1 Y 1 B PHE 133 B PHE 63 1 Y 1 B ASN 134 B ASN 64 1 Y 1 B SER 135 B SER 65 1 Y 1 B SER 136 B SER 66 1 Y 1 B SER 137 B SER 67 1 Y 1 B PRO 138 B PRO 68 1 Y 1 B GLU 139 B GLU 69 1 Y 1 B LEU 166 B LEU 96 1 Y 1 B ALA 167 B ALA 97 1 Y 1 B GLN 168 B GLN 98 1 Y 1 B PRO 169 B PRO 99 1 Y 1 B ALA 170 B ALA 100 1 Y 1 B ALA 171 B ALA 101 1 Y 1 B LEU 172 B LEU 102 1 Y 1 B SER 173 B SER 103 1 Y 1 B SER 174 B SER 104 1 Y 1 B GLN 175 B GLN 105 1 Y 1 B SER 176 B SER 106 1 Y 1 B SER 177 B SER 107 1 Y 1 B LEU 178 B LEU 108 1 Y 1 B SER 179 B SER 109 1 Y 1 B PRO 180 B PRO 110 1 Y 1 14.14 2.30 115.30 129.44 A A A CA CB CG LEU LEU LEU 79 79 79 N 1 A ILE 24 -81.61 -77.26 1 A HIS 27 -178.62 142.89 1 A GLU 37 -175.42 118.50 1 A SER 65 -54.90 -83.41 1 A ALA 66 -10.84 -59.36 1 A ARG 123 -164.60 95.92 1 A GLN 165 -69.13 1.99 1 B ALA 77 -172.81 -178.97 1 B CYS 78 38.56 51.43 1 B ASN 79 76.15 -126.89 1 B GLN 81 -21.77 136.50 1 B ASP 90 -64.49 92.88 1 B SER 103 79.70 46.96 1 B ASP 106 49.30 125.86 1 B ALA 107 -77.80 28.15 1 B SER 117 52.56 -67.13 1 B SER 118 -147.79 50.18 1 B ARG 119 176.37 141.92 1 B GLU 149 -59.29 -73.34 1 B LYS 150 -111.32 78.76 1 B PRO 151 -67.80 50.55 1 B SER 154 -56.53 171.66 1 B GLU 163 -53.92 102.42 residues 127-139 and 166-180 of Byr2 are ill defined in electron density and are not included in the model 0.3050000 0.01 0.2350000 0.2400000 0.2400000 3 25 860 8592 8526 10.0 99.9 random 1 isotropic THROUGHOUT 0 MOLECULAR REPLACEMENT PDB entry 5p21 Engh & Huber 0.55 0.4 25 0.4 0.3 3 25 0 2012 33 0 1979 0.009 1.4 24.1 0.75 0.3500000 0.029 0.2970000 3.19 144 1253 1253 6 10.3 99.9 56 3 25 1K8R 8592 8526 0 -3 0.1390000 0.1390000 1 18.6 12.8 99.7 0.3000000 3 3.1 4.1 788 0.3000000 3.3 99.9 phasing AMoRE refinement CNS data reduction X-GEN data scaling XDS Crystal structure of Ras-Bry2RBD complex 1 N N 2 N N 3 N N 4 N N A GLY 15 A GLY 15 HELX_P A GLN 25 A GLN 25 1 1 11 A GLN 61 A GLN 61 HELX_P A ALA 66 A ALA 66 5 2 6 A MET 67 A MET 67 HELX_P A THR 74 A THR 74 1 3 8 A ASN 86 A ASN 86 HELX_P A ASP 92 A ASP 92 1 4 7 A ASP 92 A ASP 92 HELX_P A LYS 104 A LYS 104 1 5 13 A GLU 126 A GLU 126 HELX_P A GLY 138 A GLY 138 1 6 13 A GLY 151 A GLY 151 HELX_P A GLN 165 A GLN 165 1 7 15 B ASP 90 B ASP 20 HELX_P B SER 103 B SER 33 1 8 14 B SER 154 B SER 84 HELX_P B SER 161 B SER 91 1 9 8 metalc 2.487 A SER 17 A OG SER 17 1_555 A MG 168 C MG MG 1_555 metalc 2.967 A THR 35 A OG1 THR 35 1_555 A MG 168 C MG MG 1_555 metalc 3.075 A ASP 57 A OD1 ASP 57 1_555 A MG 168 C MG MG 1_555 metalc 2.820 A THR 58 A O THR 58 1_555 A MG 168 C MG MG 1_555 metalc 2.978 A GNP 167 D O2B GNP 1_555 A MG 168 C MG MG 1_555 metalc 2.802 A GNP 167 D O2G GNP 1_555 A MG 168 C MG MG 1_555 SIGNALING PROTEIN signal transduction, cancer, GTPase, ubiquitin fold, SIGNALING PROTEIN RASH_HUMAN UNP 1 1 P01112 MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLC VFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLV REIRQH BYR2_SCHPO UNP 2 71 P28829 CILRFIACNGQTRAVQSRGDYQKTLAIALKKFSLEDASKFIVCVSQSSRIKLITEEEFKQICFNSSSPERDRLIIVPKEK PCPSFEDLRRSWEIELAQPAALSSQSSLSP 1 166 1K8R 1 166 P01112 A 1 1 166 71 180 1K8R 71 180 P28829 B 2 1 110 11 parallel parallel parallel parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel A TYR 141 A TYR 141 A GLU 143 A GLU 143 A MET 111 A MET 111 A ASN 116 A ASN 116 A GLY 77 A GLY 77 A ALA 83 A ALA 83 A THR 2 A THR 2 A GLY 10 A GLY 10 A GLU 49 A GLU 49 A ASP 57 A ASP 57 A ASP 38 A ASP 38 A ILE 46 A ILE 46 B THR 82 B THR 12 B GLN 86 B GLN 16 B ILE 72 B ILE 2 B ILE 76 B ILE 6 B LEU 143 B LEU 73 B PRO 147 B PRO 77 B PHE 110 B PHE 40 B SER 115 B SER 45 B ILE 120 B ILE 50 B LEU 122 B LEU 52 BINDING SITE FOR RESIDUE MG A 168 A MG 168 Software 6 BINDING SITE FOR RESIDUE GNP A 167 A GNP 167 Software 22 A LYS 16 A LYS 16 6 1_555 A SER 17 A SER 17 6 1_555 A THR 35 A THR 35 6 1_555 A ASP 57 A ASP 57 6 1_555 A THR 58 A THR 58 6 1_555 A GNP 167 D GNP 6 1_555 A GLY 13 A GLY 13 22 1_555 A VAL 14 A VAL 14 22 1_555 A GLY 15 A GLY 15 22 1_555 A LYS 16 A LYS 16 22 1_555 A SER 17 A SER 17 22 1_555 A ALA 18 A ALA 18 22 1_555 A PHE 28 A PHE 28 22 1_555 A VAL 29 A VAL 29 22 1_555 A ASP 30 A ASP 30 22 1_555 A GLU 31 A GLU 31 22 1_555 A TYR 32 A TYR 32 22 1_555 A PRO 34 A PRO 34 22 1_555 A THR 35 A THR 35 22 1_555 A GLY 60 A GLY 60 22 1_555 A ASN 116 A ASN 116 22 1_555 A LYS 117 A LYS 117 22 1_555 A ASP 119 A ASP 119 22 1_555 A LEU 120 A LEU 120 22 1_555 A SER 145 A SER 145 22 1_555 A ALA 146 A ALA 146 22 1_555 A LYS 147 A LYS 147 22 1_555 A MG 168 C MG 22 1_555 155 H 3 2