0.012674
0.000000
0.000000
0.000000
0.012674
0.000000
0.000000
0.000000
0.004562
0.00000
0.00000
0.00000
Holden, H.M.
Rayment, I.
Sakon, J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
16
90.00
90.00
90.00
78.900
78.900
219.200
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
N
N
159
S
C
N
160
N
C
N
161
N
O
N
162
S
C
N
163
N
C
N
164
N
C
N
165
N
C
N
166
N
O
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
N
N
181
S
C
N
182
N
C
N
183
N
O
N
184
N
C
N
185
N
C
N
186
N
C
N
187
N
C
N
188
N
O
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
N
N
203
S
C
N
204
N
C
N
205
N
O
N
206
N
C
N
207
N
C
N
208
N
C
N
209
N
C
N
210
N
N
N
211
N
O
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
N
N
228
S
C
N
229
N
C
N
230
N
O
N
231
N
C
N
232
N
C
N
233
N
S
N
234
N
C
N
235
N
O
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
N
N
248
S
C
N
249
N
C
N
250
N
O
N
251
N
C
Y
252
N
C
Y
253
N
C
Y
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
N
258
N
O
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
N
N
271
S
C
N
272
N
C
N
273
N
O
N
274
N
C
N
275
N
C
N
276
N
C
N
277
N
O
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
N
C
N
292
N
O
N
293
N
O
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
N
N
302
S
C
N
303
N
C
N
304
N
O
N
305
R
C
N
306
N
O
N
307
N
C
N
308
N
O
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
N
C
Y
323
N
C
Y
324
N
C
Y
325
N
C
Y
326
N
N
Y
327
N
C
Y
328
N
C
Y
329
N
C
Y
330
N
C
Y
331
N
C
N
332
N
O
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
N
N
346
S
C
N
347
N
C
N
348
N
O
N
349
N
C
Y
350
N
C
Y
351
N
C
Y
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
N
356
N
O
N
357
N
O
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
N
N
370
S
C
N
371
N
C
N
372
N
O
N
373
N
C
N
374
N
C
N
375
N
C
N
376
N
O
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
doub
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
doub
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
doub
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
doub
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
Y
246
N
doub
Y
247
N
sing
Y
248
N
sing
N
249
N
sing
Y
250
N
doub
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
doub
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
doub
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
doub
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
doub
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
Y
315
N
doub
Y
316
N
sing
Y
317
N
sing
N
318
N
sing
Y
319
N
doub
Y
320
N
sing
Y
321
N
sing
N
322
N
sing
Y
323
N
sing
Y
324
N
doub
N
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
doub
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
Y
343
N
doub
Y
344
N
sing
Y
345
N
sing
N
346
N
sing
Y
347
N
doub
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
doub
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
32
11977
11984
10.1021/bi00096a006
8218273
Molecular structure of kanamycin nucleotidyltransferase determined to 3.0-A resolution.
1993
10.2210/pdb1kan/pdb
pdb_00001kan
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
x-ray
1
1.0
28901.689
KANAMYCIN NUCLEOTIDYLTRANSFERASE
2.7.7.-
2
man
polymer
no
no
MNGPIIMTREERMKIVHEIKERILDKYGDDVKAIGVYGSLGRQTDGPYSDIEMMCVMSTEEAEFSHEWTTGEWKVEVNFY
SEEILLDYASQVESDWPLTHGQFFSILPIYDSGGYLEKVYQTAKSVEAQKFHDAICALIVEELFEYAGKWRNIRVQGPTT
FLPSLTVQVAMAGAMLIGLHHRICYTTSASVLTEAVKQSDLPSGYDHLCQFVMSGQLSDSEKLLESLENFWNGIQEWTER
HGYIVDVSKRIPF
MNGPIIMTREERMKIVHEIKERILDKYGDDVKAIGVYGSLGRQTDGPYSDIEMMCVMSTEEAEFSHEWTTGEWKVEVNFY
SEEILLDYASQVESDWPLTHGQFFSILPIYDSGGYLEKVYQTAKSVEAQKFHDAICALIVEELFEYAGKWRNIRVQGPTT
FLPSLTVQVAMAGAMLIGLHHRICYTTSASVLTEAVKQSDLPSGYDHLCQFVMSGQLSDSEKLLESLENFWNGIQEWTER
HGYIVDVSKRIPF
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Staphylococcus
sample
1280
Staphylococcus aureus
2.95
58.31
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Other
1
0
1994-08-31
1
1
2008-03-24
1
2
2011-07-13
1
3
2024-02-07
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
_struct_ref_seq_dif.details
CA ATOMS ONLY
CA ATOMS ONLY
Y
BNL
1993-08-13
REL
MET
1
n
1
MET
1
A
ASN
2
n
2
ASN
2
A
GLY
3
n
3
GLY
3
A
PRO
4
n
4
PRO
4
A
ILE
5
n
5
ILE
5
A
ILE
6
n
6
ILE
6
A
MET
7
n
7
MET
7
A
THR
8
n
8
THR
8
A
ARG
9
n
9
ARG
9
A
GLU
10
n
10
GLU
10
A
GLU
11
n
11
GLU
11
A
ARG
12
n
12
ARG
12
A
MET
13
n
13
MET
13
A
LYS
14
n
14
LYS
14
A
ILE
15
n
15
ILE
15
A
VAL
16
n
16
VAL
16
A
HIS
17
n
17
HIS
17
A
GLU
18
n
18
GLU
18
A
ILE
19
n
19
ILE
19
A
LYS
20
n
20
LYS
20
A
GLU
21
n
21
GLU
21
A
ARG
22
n
22
ARG
22
A
ILE
23
n
23
ILE
23
A
LEU
24
n
24
LEU
24
A
ASP
25
n
25
ASP
25
A
LYS
26
n
26
LYS
26
A
TYR
27
n
27
TYR
27
A
GLY
28
n
28
GLY
28
A
ASP
29
n
29
ASP
29
A
ASP
30
n
30
ASP
30
A
VAL
31
n
31
VAL
31
A
LYS
32
n
32
LYS
32
A
ALA
33
n
33
ALA
33
A
ILE
34
n
34
ILE
34
A
GLY
35
n
35
GLY
35
A
VAL
36
n
36
VAL
36
A
TYR
37
n
37
TYR
37
A
GLY
38
n
38
GLY
38
A
SER
39
n
39
SER
39
A
LEU
40
n
40
LEU
40
A
GLY
41
n
41
GLY
41
A
ARG
42
n
42
ARG
42
A
GLN
43
n
43
GLN
43
A
THR
44
n
44
THR
44
A
ASP
45
n
45
ASP
45
A
GLY
46
n
46
GLY
46
A
PRO
47
n
47
PRO
47
A
TYR
48
n
48
TYR
48
A
SER
49
n
49
SER
49
A
ASP
50
n
50
ASP
50
A
ILE
51
n
51
ILE
51
A
GLU
52
n
52
GLU
52
A
MET
53
n
53
MET
53
A
MET
54
n
54
MET
54
A
CYS
55
n
55
CYS
55
A
VAL
56
n
56
VAL
56
A
MET
57
n
57
MET
57
A
SER
58
n
58
SER
58
A
THR
59
n
59
THR
59
A
GLU
60
n
60
GLU
60
A
GLU
61
n
61
GLU
61
A
ALA
62
n
62
ALA
62
A
GLU
63
n
63
GLU
63
A
PHE
64
n
64
PHE
64
A
SER
65
n
65
SER
65
A
HIS
66
n
66
HIS
66
A
GLU
67
n
67
GLU
67
A
TRP
68
n
68
TRP
68
A
THR
69
n
69
THR
69
A
THR
70
n
70
THR
70
A
GLY
71
n
71
GLY
71
A
GLU
72
n
72
GLU
72
A
TRP
73
n
73
TRP
73
A
LYS
74
n
74
LYS
74
A
VAL
75
n
75
VAL
75
A
GLU
76
n
76
GLU
76
A
VAL
77
n
77
VAL
77
A
ASN
78
n
78
ASN
78
A
PHE
79
n
79
PHE
79
A
TYR
80
n
80
TYR
80
A
SER
81
n
81
SER
81
A
GLU
82
n
82
GLU
82
A
GLU
83
n
83
GLU
83
A
ILE
84
n
84
ILE
84
A
LEU
85
n
85
LEU
85
A
LEU
86
n
86
LEU
86
A
ASP
87
n
87
ASP
87
A
TYR
88
n
88
TYR
88
A
ALA
89
n
89
ALA
89
A
SER
90
n
90
SER
90
A
GLN
91
n
91
GLN
91
A
VAL
92
n
92
VAL
92
A
GLU
93
n
93
GLU
93
A
SER
94
n
94
SER
94
A
ASP
95
n
95
ASP
95
A
TRP
96
n
96
TRP
96
A
PRO
97
n
97
PRO
97
A
LEU
98
n
98
LEU
98
A
THR
99
n
99
THR
99
A
HIS
100
n
100
HIS
100
A
GLY
101
n
101
GLY
101
A
GLN
102
n
102
GLN
102
A
PHE
103
n
103
PHE
103
A
PHE
104
n
104
PHE
104
A
SER
105
n
105
SER
105
A
ILE
106
n
106
ILE
106
A
LEU
107
n
107
LEU
107
A
PRO
108
n
108
PRO
108
A
ILE
109
n
109
ILE
109
A
TYR
110
n
110
TYR
110
A
ASP
111
n
111
ASP
111
A
SER
112
n
112
SER
112
A
GLY
113
n
113
GLY
113
A
GLY
114
n
114
GLY
114
A
TYR
115
n
115
TYR
115
A
LEU
116
n
116
LEU
116
A
GLU
117
n
117
GLU
117
A
LYS
118
n
118
LYS
118
A
VAL
119
n
119
VAL
119
A
TYR
120
n
120
TYR
120
A
GLN
121
n
121
GLN
121
A
THR
122
n
122
THR
122
A
ALA
123
n
123
ALA
123
A
LYS
124
n
124
LYS
124
A
SER
125
n
125
SER
125
A
VAL
126
n
126
VAL
126
A
GLU
127
n
127
GLU
127
A
ALA
128
n
128
ALA
128
A
GLN
129
n
129
GLN
129
A
LYS
130
n
130
LYS
130
A
PHE
131
n
131
PHE
131
A
HIS
132
n
132
HIS
132
A
ASP
133
n
133
ASP
133
A
ALA
134
n
134
ALA
134
A
ILE
135
n
135
ILE
135
A
CYS
136
n
136
CYS
136
A
ALA
137
n
137
ALA
137
A
LEU
138
n
138
LEU
138
A
ILE
139
n
139
ILE
139
A
VAL
140
n
140
VAL
140
A
GLU
141
n
141
GLU
141
A
GLU
142
n
142
GLU
142
A
LEU
143
n
143
LEU
143
A
PHE
144
n
144
PHE
144
A
GLU
145
n
145
GLU
145
A
TYR
146
n
146
TYR
146
A
ALA
147
n
147
ALA
147
A
GLY
148
n
148
GLY
148
A
LYS
149
n
149
LYS
149
A
TRP
150
n
150
TRP
150
A
ARG
151
n
151
ARG
151
A
ASN
152
n
152
ASN
152
A
ILE
153
n
153
ILE
153
A
ARG
154
n
154
ARG
154
A
VAL
155
n
155
VAL
155
A
GLN
156
n
156
GLN
156
A
GLY
157
n
157
GLY
157
A
PRO
158
n
158
PRO
158
A
THR
159
n
159
THR
159
A
THR
160
n
160
THR
160
A
PHE
161
n
161
PHE
161
A
LEU
162
n
162
LEU
162
A
PRO
163
n
163
PRO
163
A
SER
164
n
164
SER
164
A
LEU
165
n
165
LEU
165
A
THR
166
n
166
THR
166
A
VAL
167
n
167
VAL
167
A
GLN
168
n
168
GLN
168
A
VAL
169
n
169
VAL
169
A
ALA
170
n
170
ALA
170
A
MET
171
n
171
MET
171
A
ALA
172
n
172
ALA
172
A
GLY
173
n
173
GLY
173
A
ALA
174
n
174
ALA
174
A
MET
175
n
175
MET
175
A
LEU
176
n
176
LEU
176
A
ILE
177
n
177
ILE
177
A
GLY
178
n
178
GLY
178
A
LEU
179
n
179
LEU
179
A
HIS
180
n
180
HIS
180
A
HIS
181
n
181
HIS
181
A
ARG
182
n
182
ARG
182
A
ILE
183
n
183
ILE
183
A
CYS
184
n
184
CYS
184
A
TYR
185
n
185
TYR
185
A
THR
186
n
186
THR
186
A
THR
187
n
187
THR
187
A
SER
188
n
188
SER
188
A
ALA
189
n
189
ALA
189
A
SER
190
n
190
SER
190
A
VAL
191
n
191
VAL
191
A
LEU
192
n
192
LEU
192
A
THR
193
n
193
THR
193
A
GLU
194
n
194
GLU
194
A
ALA
195
n
195
ALA
195
A
VAL
196
n
196
VAL
196
A
LYS
197
n
197
LYS
197
A
GLN
198
n
198
GLN
198
A
SER
199
n
199
SER
199
A
ASP
200
n
200
ASP
200
A
LEU
201
n
201
LEU
201
A
PRO
202
n
202
PRO
202
A
SER
203
n
203
SER
203
A
GLY
204
n
204
GLY
204
A
TYR
205
n
205
TYR
205
A
ASP
206
n
206
ASP
206
A
HIS
207
n
207
HIS
207
A
LEU
208
n
208
LEU
208
A
CYS
209
n
209
CYS
209
A
GLN
210
n
210
GLN
210
A
PHE
211
n
211
PHE
211
A
VAL
212
n
212
VAL
212
A
MET
213
n
213
MET
213
A
SER
214
n
214
SER
214
A
GLY
215
n
215
GLY
215
A
GLN
216
n
216
GLN
216
A
LEU
217
n
217
LEU
217
A
SER
218
n
218
SER
218
A
ASP
219
n
219
ASP
219
A
SER
220
n
220
SER
220
A
GLU
221
n
221
GLU
221
A
LYS
222
n
222
LYS
222
A
LEU
223
n
223
LEU
223
A
LEU
224
n
224
LEU
224
A
GLU
225
n
225
GLU
225
A
SER
226
n
226
SER
226
A
LEU
227
n
227
LEU
227
A
GLU
228
n
228
GLU
228
A
ASN
229
n
229
ASN
229
A
PHE
230
n
230
PHE
230
A
TRP
231
n
231
TRP
231
A
ASN
232
n
232
ASN
232
A
GLY
233
n
233
GLY
233
A
ILE
234
n
234
ILE
234
A
GLN
235
n
235
GLN
235
A
GLU
236
n
236
GLU
236
A
TRP
237
n
237
TRP
237
A
THR
238
n
238
THR
238
A
GLU
239
n
239
GLU
239
A
ARG
240
n
240
ARG
240
A
HIS
241
n
241
HIS
241
A
GLY
242
n
242
GLY
242
A
TYR
243
n
243
TYR
243
A
ILE
244
n
244
ILE
244
A
VAL
245
n
245
VAL
245
A
ASP
246
n
246
ASP
246
A
VAL
247
n
247
VAL
247
A
SER
248
n
248
SER
248
A
LYS
249
n
249
LYS
249
A
ARG
250
n
250
ARG
250
A
ILE
251
n
251
ILE
251
A
PRO
252
n
252
PRO
252
A
PHE
253
n
253
PHE
253
A
MET
1
n
1
MET
1
B
ASN
2
n
2
ASN
2
B
GLY
3
n
3
GLY
3
B
PRO
4
n
4
PRO
4
B
ILE
5
n
5
ILE
5
B
ILE
6
n
6
ILE
6
B
MET
7
n
7
MET
7
B
THR
8
n
8
THR
8
B
ARG
9
n
9
ARG
9
B
GLU
10
n
10
GLU
10
B
GLU
11
n
11
GLU
11
B
ARG
12
n
12
ARG
12
B
MET
13
n
13
MET
13
B
LYS
14
n
14
LYS
14
B
ILE
15
n
15
ILE
15
B
VAL
16
n
16
VAL
16
B
HIS
17
n
17
HIS
17
B
GLU
18
n
18
GLU
18
B
ILE
19
n
19
ILE
19
B
LYS
20
n
20
LYS
20
B
GLU
21
n
21
GLU
21
B
ARG
22
n
22
ARG
22
B
ILE
23
n
23
ILE
23
B
LEU
24
n
24
LEU
24
B
ASP
25
n
25
ASP
25
B
LYS
26
n
26
LYS
26
B
TYR
27
n
27
TYR
27
B
GLY
28
n
28
GLY
28
B
ASP
29
n
29
ASP
29
B
ASP
30
n
30
ASP
30
B
VAL
31
n
31
VAL
31
B
LYS
32
n
32
LYS
32
B
ALA
33
n
33
ALA
33
B
ILE
34
n
34
ILE
34
B
GLY
35
n
35
GLY
35
B
VAL
36
n
36
VAL
36
B
TYR
37
n
37
TYR
37
B
GLY
38
n
38
GLY
38
B
SER
39
n
39
SER
39
B
LEU
40
n
40
LEU
40
B
GLY
41
n
41
GLY
41
B
ARG
42
n
42
ARG
42
B
GLN
43
n
43
GLN
43
B
THR
44
n
44
THR
44
B
ASP
45
n
45
ASP
45
B
GLY
46
n
46
GLY
46
B
PRO
47
n
47
PRO
47
B
TYR
48
n
48
TYR
48
B
SER
49
n
49
SER
49
B
ASP
50
n
50
ASP
50
B
ILE
51
n
51
ILE
51
B
GLU
52
n
52
GLU
52
B
MET
53
n
53
MET
53
B
MET
54
n
54
MET
54
B
CYS
55
n
55
CYS
55
B
VAL
56
n
56
VAL
56
B
MET
57
n
57
MET
57
B
SER
58
n
58
SER
58
B
THR
59
n
59
THR
59
B
GLU
60
n
60
GLU
60
B
GLU
61
n
61
GLU
61
B
ALA
62
n
62
ALA
62
B
GLU
63
n
63
GLU
63
B
PHE
64
n
64
PHE
64
B
SER
65
n
65
SER
65
B
HIS
66
n
66
HIS
66
B
GLU
67
n
67
GLU
67
B
TRP
68
n
68
TRP
68
B
THR
69
n
69
THR
69
B
THR
70
n
70
THR
70
B
GLY
71
n
71
GLY
71
B
GLU
72
n
72
GLU
72
B
TRP
73
n
73
TRP
73
B
LYS
74
n
74
LYS
74
B
VAL
75
n
75
VAL
75
B
GLU
76
n
76
GLU
76
B
VAL
77
n
77
VAL
77
B
ASN
78
n
78
ASN
78
B
PHE
79
n
79
PHE
79
B
TYR
80
n
80
TYR
80
B
SER
81
n
81
SER
81
B
GLU
82
n
82
GLU
82
B
GLU
83
n
83
GLU
83
B
ILE
84
n
84
ILE
84
B
LEU
85
n
85
LEU
85
B
LEU
86
n
86
LEU
86
B
ASP
87
n
87
ASP
87
B
TYR
88
n
88
TYR
88
B
ALA
89
n
89
ALA
89
B
SER
90
n
90
SER
90
B
GLN
91
n
91
GLN
91
B
VAL
92
n
92
VAL
92
B
GLU
93
n
93
GLU
93
B
SER
94
n
94
SER
94
B
ASP
95
n
95
ASP
95
B
TRP
96
n
96
TRP
96
B
PRO
97
n
97
PRO
97
B
LEU
98
n
98
LEU
98
B
THR
99
n
99
THR
99
B
HIS
100
n
100
HIS
100
B
GLY
101
n
101
GLY
101
B
GLN
102
n
102
GLN
102
B
PHE
103
n
103
PHE
103
B
PHE
104
n
104
PHE
104
B
SER
105
n
105
SER
105
B
ILE
106
n
106
ILE
106
B
LEU
107
n
107
LEU
107
B
PRO
108
n
108
PRO
108
B
ILE
109
n
109
ILE
109
B
TYR
110
n
110
TYR
110
B
ASP
111
n
111
ASP
111
B
SER
112
n
112
SER
112
B
GLY
113
n
113
GLY
113
B
GLY
114
n
114
GLY
114
B
TYR
115
n
115
TYR
115
B
LEU
116
n
116
LEU
116
B
GLU
117
n
117
GLU
117
B
LYS
118
n
118
LYS
118
B
VAL
119
n
119
VAL
119
B
TYR
120
n
120
TYR
120
B
GLN
121
n
121
GLN
121
B
THR
122
n
122
THR
122
B
ALA
123
n
123
ALA
123
B
LYS
124
n
124
LYS
124
B
SER
125
n
125
SER
125
B
VAL
126
n
126
VAL
126
B
GLU
127
n
127
GLU
127
B
ALA
128
n
128
ALA
128
B
GLN
129
n
129
GLN
129
B
LYS
130
n
130
LYS
130
B
PHE
131
n
131
PHE
131
B
HIS
132
n
132
HIS
132
B
ASP
133
n
133
ASP
133
B
ALA
134
n
134
ALA
134
B
ILE
135
n
135
ILE
135
B
CYS
136
n
136
CYS
136
B
ALA
137
n
137
ALA
137
B
LEU
138
n
138
LEU
138
B
ILE
139
n
139
ILE
139
B
VAL
140
n
140
VAL
140
B
GLU
141
n
141
GLU
141
B
GLU
142
n
142
GLU
142
B
LEU
143
n
143
LEU
143
B
PHE
144
n
144
PHE
144
B
GLU
145
n
145
GLU
145
B
TYR
146
n
146
TYR
146
B
ALA
147
n
147
ALA
147
B
GLY
148
n
148
GLY
148
B
LYS
149
n
149
LYS
149
B
TRP
150
n
150
TRP
150
B
ARG
151
n
151
ARG
151
B
ASN
152
n
152
ASN
152
B
ILE
153
n
153
ILE
153
B
ARG
154
n
154
ARG
154
B
VAL
155
n
155
VAL
155
B
GLN
156
n
156
GLN
156
B
GLY
157
n
157
GLY
157
B
PRO
158
n
158
PRO
158
B
THR
159
n
159
THR
159
B
THR
160
n
160
THR
160
B
PHE
161
n
161
PHE
161
B
LEU
162
n
162
LEU
162
B
PRO
163
n
163
PRO
163
B
SER
164
n
164
SER
164
B
LEU
165
n
165
LEU
165
B
THR
166
n
166
THR
166
B
VAL
167
n
167
VAL
167
B
GLN
168
n
168
GLN
168
B
VAL
169
n
169
VAL
169
B
ALA
170
n
170
ALA
170
B
MET
171
n
171
MET
171
B
ALA
172
n
172
ALA
172
B
GLY
173
n
173
GLY
173
B
ALA
174
n
174
ALA
174
B
MET
175
n
175
MET
175
B
LEU
176
n
176
LEU
176
B
ILE
177
n
177
ILE
177
B
GLY
178
n
178
GLY
178
B
LEU
179
n
179
LEU
179
B
HIS
180
n
180
HIS
180
B
HIS
181
n
181
HIS
181
B
ARG
182
n
182
ARG
182
B
ILE
183
n
183
ILE
183
B
CYS
184
n
184
CYS
184
B
TYR
185
n
185
TYR
185
B
THR
186
n
186
THR
186
B
THR
187
n
187
THR
187
B
SER
188
n
188
SER
188
B
ALA
189
n
189
ALA
189
B
SER
190
n
190
SER
190
B
VAL
191
n
191
VAL
191
B
LEU
192
n
192
LEU
192
B
THR
193
n
193
THR
193
B
GLU
194
n
194
GLU
194
B
ALA
195
n
195
ALA
195
B
VAL
196
n
196
VAL
196
B
LYS
197
n
197
LYS
197
B
GLN
198
n
198
GLN
198
B
SER
199
n
199
SER
199
B
ASP
200
n
200
ASP
200
B
LEU
201
n
201
LEU
201
B
PRO
202
n
202
PRO
202
B
SER
203
n
203
SER
203
B
GLY
204
n
204
GLY
204
B
TYR
205
n
205
TYR
205
B
ASP
206
n
206
ASP
206
B
HIS
207
n
207
HIS
207
B
LEU
208
n
208
LEU
208
B
CYS
209
n
209
CYS
209
B
GLN
210
n
210
GLN
210
B
PHE
211
n
211
PHE
211
B
VAL
212
n
212
VAL
212
B
MET
213
n
213
MET
213
B
SER
214
n
214
SER
214
B
GLY
215
n
215
GLY
215
B
GLN
216
n
216
GLN
216
B
LEU
217
n
217
LEU
217
B
SER
218
n
218
SER
218
B
ASP
219
n
219
ASP
219
B
SER
220
n
220
SER
220
B
GLU
221
n
221
GLU
221
B
LYS
222
n
222
LYS
222
B
LEU
223
n
223
LEU
223
B
LEU
224
n
224
LEU
224
B
GLU
225
n
225
GLU
225
B
SER
226
n
226
SER
226
B
LEU
227
n
227
LEU
227
B
GLU
228
n
228
GLU
228
B
ASN
229
n
229
ASN
229
B
PHE
230
n
230
PHE
230
B
TRP
231
n
231
TRP
231
B
ASN
232
n
232
ASN
232
B
GLY
233
n
233
GLY
233
B
ILE
234
n
234
ILE
234
B
GLN
235
n
235
GLN
235
B
GLU
236
n
236
GLU
236
B
TRP
237
n
237
TRP
237
B
THR
238
n
238
THR
238
B
GLU
239
n
239
GLU
239
B
ARG
240
n
240
ARG
240
B
HIS
241
n
241
HIS
241
B
GLY
242
n
242
GLY
242
B
TYR
243
n
243
TYR
243
B
ILE
244
n
244
ILE
244
B
VAL
245
n
245
VAL
245
B
ASP
246
n
246
ASP
246
B
VAL
247
n
247
VAL
247
B
SER
248
n
248
SER
248
B
LYS
249
n
249
LYS
249
B
ARG
250
n
250
ARG
250
B
ILE
251
n
251
ILE
251
B
PRO
252
n
252
PRO
252
B
PHE
253
n
253
PHE
253
B
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.1890000
3.0
1
3.0
0
506
0
0
506
0.012
3.0
refinement
TNT
MOLECULAR STRUCTURE OF KANAMYCIN NUCLEOTIDYLTRANSFERASE DETERMINED TO 3.0-ANGSTROMS RESOLUTION
1
N
N
1
N
N
A
ARG
9
A
ARG
9
HELX_P
A
ASP
25
A
ASP
25
1
A1
17
A
SER
39
A
SER
39
HELX_P
ALPHA-HELICAL TURN
A
ARG
42
A
ARG
42
1
A3
4
A
GLU
82
A
GLU
82
HELX_P
A
SER
90
A
SER
90
1
A7
9
A
TRP
96
A
TRP
96
HELX_P
A
PHE
104
A
PHE
104
1
A8
9
A
TYR
115
A
TYR
115
HELX_P
A
LYS
124
A
LYS
124
1
A10
10
A
ALA
128
A
ALA
128
HELX_P
A
ILE
153
A
ILE
153
1
A11
26
A
LEU
162
A
LEU
162
HELX_P
A
HIS
180
A
HIS
180
1
A12
19
A
ALA
189
A
ALA
189
HELX_P
A
ALA
195
A
ALA
195
1
A13
7
A
TYR
205
A
TYR
205
HELX_P
A
SER
214
A
SER
214
1
A14
10
A
SER
220
A
SER
220
HELX_P
A
HIS
241
A
HIS
241
1
A15
22
B
ARG
9
B
ARG
9
HELX_P
B
ASP
25
B
ASP
25
1
B1
17
B
SER
39
B
SER
39
HELX_P
ALPHA-HELICAL TURN
B
ARG
42
B
ARG
42
1
B3
4
B
GLU
82
B
GLU
82
HELX_P
B
SER
90
B
SER
90
1
B7
9
B
TRP
96
B
TRP
96
HELX_P
B
PHE
104
B
PHE
104
1
B8
9
B
TYR
115
B
TYR
115
HELX_P
B
LYS
124
B
LYS
124
1
B10
10
B
ALA
128
B
ALA
128
HELX_P
B
ILE
153
B
ILE
153
1
B11
26
B
LEU
162
B
LEU
162
HELX_P
B
HIS
180
B
HIS
180
1
B12
19
B
ALA
189
B
ALA
189
HELX_P
B
ALA
195
B
ALA
195
1
B13
7
B
TYR
205
B
TYR
205
HELX_P
B
SER
214
B
SER
214
1
B14
10
B
SER
220
B
SER
220
HELX_P
B
HIS
241
B
HIS
241
1
B15
22
NUCLEOTIDYLTRANSFERASE
NUCLEOTIDYLTRANSFERASE
KANU_STAAU
UNP
1
1
P05057
MNGPIIMTREERMKIVHEIKERILDKYGDDVKAIGVYGSLGRQTDGPYSDIEMMCVMSTEEAEFSHEWTTGEWKVEVNFD
SEEILLDYASQVESDWPLTHGQFFSILPIYDSGGYLEKVYQTAKSVEAQTFHDAICALIVEELFEYAGKWRNIRVQGPTT
FLPSLTVQVAMAGAMLIGLHHRICYTTSASVLTEAVKQSDLPSGYDHLCQFVMSGQLSDSEKLLESLENFWNGIQEWTER
HGYIVDVSKRIPF
1
253
1KAN
1
253
P05057
A
1
1
253
1
253
1KAN
1
253
P05057
B
1
1
253
1
ASP
conflict
TYR
80
1KAN
A
P05057
UNP
80
80
1
THR
conflict
LYS
130
1KAN
A
P05057
UNP
130
130
2
ASP
conflict
TYR
80
1KAN
B
P05057
UNP
80
80
2
THR
conflict
LYS
130
1KAN
B
P05057
UNP
130
130
5
5
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ALA
62
A
ALA
62
A
THR
69
A
THR
69
A
LYS
74
A
LYS
74
A
SER
81
A
SER
81
A
ILE
51
A
ILE
51
A
MET
57
A
MET
57
A
VAL
31
A
VAL
31
A
VAL
36
A
VAL
36
A
LEU
107
A
LEU
107
A
ASP
111
A
ASP
111
B
ALA
62
B
ALA
62
B
THR
69
B
THR
69
B
LYS
74
B
LYS
74
B
SER
81
B
SER
81
B
ILE
51
B
ILE
51
B
MET
57
B
MET
57
B
VAL
31
B
VAL
31
B
VAL
36
B
VAL
36
B
LEU
107
B
LEU
107
B
ASP
111
B
ASP
111
96
P 43 21 2