1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
THR 143 - ASP 144 MODEL 2 OMEGA = 264.10 PEPTIDE BOND DEVIATES SIGNIFICANTLY FROM TRANS CONFORMATION
Campbell, A.P.
Mcinnes, C.
Hodges, R.S.
Sykes, B.D.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C2 H4 O
44.053
ACETYL GROUP
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Biochemistry
BICHAW
0033
0006-2960
34
16255
16268
10.1021/bi00050a005
8845350
Comparison of NMR solution structures of the receptor binding domains of Pseudomonas aeruginosa pili strains PAO, KB7, and PAK: implications for receptor binding and synthetic vaccine design.
1995
US
Biopolymers
BIPMAA
0161
0006-3525
34
1221
Conformational Differences between Cis and Trans Proline Isomers of a Peptide Antigen Representing the Receptor Binding Domain of Pseudomonas Aeruginosa as Studied by 1H NMR
1994
US
Biochemistry
BICHAW
0033
0006-2960
32
13432
NMR Solution Structure and Flexibility of a Peptide Antigen Representing the Receptor Binding Domain of Pseudomonas Aeruginosa
1993
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1814.006
KB7 PILIN, TRANS
1
man
polymer
FIMBRIAL PROTEIN
no
yes
(ACE)SCATTVDAKFRPNGCTD
XSCATTVDAKFRPNGCTD
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Pseudomonas
KB7
sample
287
Pseudomonas aeruginosa
pdbx_database_status
pdbx_struct_assembly
pdbx_struct_oper_list
struct_conf
repository
Initial release
Version format compliance
Version format compliance
Derived calculations
Other
1
0
1996-01-29
1
1
2008-03-24
1
2
2011-07-13
1
3
2017-11-29
_pdbx_database_status.process_site
Y
BNL
1995-10-05
REL
33
refinement
PEPFLEX II
ACE
127
n
1
ACE
127
A
SER
128
n
2
SER
128
A
CYS
129
n
3
CYS
129
A
ALA
130
n
4
ALA
130
A
THR
131
n
5
THR
131
A
THR
132
n
6
THR
132
A
VAL
133
n
7
VAL
133
A
ASP
134
n
8
ASP
134
A
ALA
135
n
9
ALA
135
A
LYS
136
n
10
LYS
136
A
PHE
137
n
11
PHE
137
A
ARG
138
n
12
ARG
138
A
PRO
139
n
13
PRO
139
A
ASN
140
n
14
ASN
140
A
GLY
141
n
15
GLY
141
A
CYS
142
n
16
CYS
142
A
THR
143
n
17
THR
143
A
ASP
144
n
18
ASP
144
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
identity operation
0.0000000000
0.0000000000
0.0000000000
28
A
A
THR
ASP
143
144
-95.90
1
-6.06
0.90
118.30
112.24
A
A
A
CB
CG
OD2
ASP
ASP
ASP
134
134
134
N
1
3.67
0.50
120.30
123.97
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
1
-5.91
0.90
118.30
112.39
A
A
A
CB
CG
OD2
ASP
ASP
ASP
144
144
144
N
2
-6.04
0.90
118.30
112.26
A
A
A
CB
CG
OD2
ASP
ASP
ASP
134
134
134
N
2
3.77
0.50
120.30
124.07
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
2
-6.12
0.90
118.30
112.18
A
A
A
CB
CG
OD2
ASP
ASP
ASP
144
144
144
N
3
-5.97
0.90
118.30
112.33
A
A
A
CB
CG
OD2
ASP
ASP
ASP
134
134
134
N
3
3.74
0.50
120.30
124.04
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
3
-5.88
0.90
118.30
112.42
A
A
A
CB
CG
OD2
ASP
ASP
ASP
144
144
144
N
4
-6.12
0.90
118.30
112.18
A
A
A
CB
CG
OD2
ASP
ASP
ASP
134
134
134
N
4
3.67
0.50
120.30
123.97
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
4
-6.04
0.90
118.30
112.26
A
A
A
CB
CG
OD2
ASP
ASP
ASP
144
144
144
N
5
-6.09
0.90
118.30
112.21
A
A
A
CB
CG
OD2
ASP
ASP
ASP
134
134
134
N
5
3.73
0.50
120.30
124.03
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
5
-6.01
0.90
118.30
112.29
A
A
A
CB
CG
OD2
ASP
ASP
ASP
144
144
144
N
6
-5.99
0.90
118.30
112.31
A
A
A
CB
CG
OD2
ASP
ASP
ASP
134
134
134
N
6
3.77
0.50
120.30
124.07
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
6
-5.87
0.90
118.30
112.43
A
A
A
CB
CG
OD2
ASP
ASP
ASP
144
144
144
N
7
-5.96
0.90
118.30
112.34
A
A
A
CB
CG
OD2
ASP
ASP
ASP
134
134
134
N
7
3.69
0.50
120.30
123.99
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
7
-6.02
0.90
118.30
112.28
A
A
A
CB
CG
OD2
ASP
ASP
ASP
144
144
144
N
8
-5.89
0.90
118.30
112.41
A
A
A
CB
CG
OD2
ASP
ASP
ASP
134
134
134
N
8
3.67
0.50
120.30
123.97
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
8
-6.01
0.90
118.30
112.29
A
A
A
CB
CG
OD2
ASP
ASP
ASP
144
144
144
N
9
-6.08
0.90
118.30
112.22
A
A
A
CB
CG
OD2
ASP
ASP
ASP
134
134
134
N
9
3.72
0.50
120.30
124.02
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
9
-5.78
0.90
118.30
112.52
A
A
A
CB
CG
OD2
ASP
ASP
ASP
144
144
144
N
10
-6.07
0.90
118.30
112.23
A
A
A
CB
CG
OD2
ASP
ASP
ASP
134
134
134
N
10
3.76
0.50
120.30
124.06
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
10
-5.97
0.90
118.30
112.33
A
A
A
CB
CG
OD2
ASP
ASP
ASP
144
144
144
N
11
5.47
0.90
118.30
123.77
A
A
A
CB
CG
OD1
ASP
ASP
ASP
134
134
134
N
11
-6.15
0.90
118.30
112.15
A
A
A
CB
CG
OD2
ASP
ASP
ASP
134
134
134
N
11
3.70
0.50
120.30
124.00
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
11
-5.94
0.90
118.30
112.36
A
A
A
CB
CG
OD2
ASP
ASP
ASP
144
144
144
N
12
-6.10
0.90
118.30
112.20
A
A
A
CB
CG
OD2
ASP
ASP
ASP
134
134
134
N
12
3.66
0.50
120.30
123.96
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
12
-6.03
0.90
118.30
112.27
A
A
A
CB
CG
OD2
ASP
ASP
ASP
144
144
144
N
13
-6.06
0.90
118.30
112.24
A
A
A
CB
CG
OD2
ASP
ASP
ASP
134
134
134
N
13
3.78
0.50
120.30
124.08
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
13
-5.92
0.90
118.30
112.38
A
A
A
CB
CG
OD2
ASP
ASP
ASP
144
144
144
N
14
-5.95
0.90
118.30
112.35
A
A
A
CB
CG
OD2
ASP
ASP
ASP
134
134
134
N
14
3.69
0.50
120.30
123.99
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
14
-5.93
0.90
118.30
112.37
A
A
A
CB
CG
OD2
ASP
ASP
ASP
144
144
144
N
15
-5.95
0.90
118.30
112.35
A
A
A
CB
CG
OD2
ASP
ASP
ASP
134
134
134
N
15
3.63
0.50
120.30
123.93
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
15
-6.14
0.90
118.30
112.16
A
A
A
CB
CG
OD2
ASP
ASP
ASP
144
144
144
N
16
-5.95
0.90
118.30
112.35
A
A
A
CB
CG
OD2
ASP
ASP
ASP
134
134
134
N
16
3.69
0.50
120.30
123.99
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
16
-5.90
0.90
118.30
112.40
A
A
A
CB
CG
OD2
ASP
ASP
ASP
144
144
144
N
17
-6.01
0.90
118.30
112.29
A
A
A
CB
CG
OD2
ASP
ASP
ASP
134
134
134
N
17
3.65
0.50
120.30
123.95
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
17
-5.99
0.90
118.30
112.31
A
A
A
CB
CG
OD2
ASP
ASP
ASP
144
144
144
N
18
5.41
0.90
118.30
123.71
A
A
A
CB
CG
OD1
ASP
ASP
ASP
134
134
134
N
18
-6.13
0.90
118.30
112.17
A
A
A
CB
CG
OD2
ASP
ASP
ASP
134
134
134
N
18
3.71
0.50
120.30
124.01
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
18
-6.06
0.90
118.30
112.24
A
A
A
CB
CG
OD2
ASP
ASP
ASP
144
144
144
N
19
-5.97
0.90
118.30
112.33
A
A
A
CB
CG
OD2
ASP
ASP
ASP
134
134
134
N
19
3.78
0.50
120.30
124.08
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
19
-6.08
0.90
118.30
112.22
A
A
A
CB
CG
OD2
ASP
ASP
ASP
144
144
144
N
20
-6.12
0.90
118.30
112.18
A
A
A
CB
CG
OD2
ASP
ASP
ASP
134
134
134
N
20
3.77
0.50
120.30
124.07
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
20
-6.03
0.90
118.30
112.27
A
A
A
CB
CG
OD2
ASP
ASP
ASP
144
144
144
N
21
-6.10
0.90
118.30
112.20
A
A
A
CB
CG
OD2
ASP
ASP
ASP
134
134
134
N
21
3.78
0.50
120.30
124.08
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
21
-6.03
0.90
118.30
112.27
A
A
A
CB
CG
OD2
ASP
ASP
ASP
144
144
144
N
22
-6.02
0.90
118.30
112.28
A
A
A
CB
CG
OD2
ASP
ASP
ASP
134
134
134
N
22
3.93
0.50
120.30
124.23
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
22
-6.04
0.90
118.30
112.26
A
A
A
CB
CG
OD2
ASP
ASP
ASP
144
144
144
N
23
-6.11
0.90
118.30
112.19
A
A
A
CB
CG
OD2
ASP
ASP
ASP
134
134
134
N
23
3.70
0.50
120.30
124.00
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
23
-5.85
0.90
118.30
112.45
A
A
A
CB
CG
OD2
ASP
ASP
ASP
144
144
144
N
24
-5.94
0.90
118.30
112.36
A
A
A
CB
CG
OD2
ASP
ASP
ASP
134
134
134
N
24
3.65
0.50
120.30
123.95
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
24
-5.94
0.90
118.30
112.36
A
A
A
CB
CG
OD2
ASP
ASP
ASP
144
144
144
N
25
6.21
0.90
118.30
124.51
A
A
A
CB
CG
OD1
ASP
ASP
ASP
134
134
134
N
25
-6.63
0.90
118.30
111.67
A
A
A
CB
CG
OD2
ASP
ASP
ASP
134
134
134
N
25
3.36
0.50
120.30
123.66
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
25
-6.07
0.90
118.30
112.23
A
A
A
CB
CG
OD2
ASP
ASP
ASP
144
144
144
N
26
-6.14
0.90
118.30
112.16
A
A
A
CB
CG
OD2
ASP
ASP
ASP
134
134
134
N
26
3.75
0.50
120.30
124.05
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
26
-6.11
0.90
118.30
112.19
A
A
A
CB
CG
OD2
ASP
ASP
ASP
144
144
144
N
27
5.44
0.90
118.30
123.74
A
A
A
CB
CG
OD1
ASP
ASP
ASP
134
134
134
N
27
-6.16
0.90
118.30
112.14
A
A
A
CB
CG
OD2
ASP
ASP
ASP
134
134
134
N
27
3.60
0.50
120.30
123.90
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
27
-6.00
0.90
118.30
112.30
A
A
A
CB
CG
OD2
ASP
ASP
ASP
144
144
144
N
28
-6.03
0.90
118.30
112.27
A
A
A
CB
CG
OD2
ASP
ASP
ASP
134
134
134
N
28
3.44
0.50
120.30
123.74
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
28
5.44
0.90
118.30
123.74
A
A
A
CB
CG
OD1
ASP
ASP
ASP
144
144
144
N
28
-6.54
0.90
118.30
111.76
A
A
A
CB
CG
OD2
ASP
ASP
ASP
144
144
144
N
29
-5.96
0.90
118.30
112.34
A
A
A
CB
CG
OD2
ASP
ASP
ASP
134
134
134
N
29
3.80
0.50
120.30
124.10
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
29
-6.07
0.90
118.30
112.23
A
A
A
CB
CG
OD2
ASP
ASP
ASP
144
144
144
N
30
-5.99
0.90
118.30
112.31
A
A
A
CB
CG
OD2
ASP
ASP
ASP
134
134
134
N
30
3.64
0.50
120.30
123.94
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
30
-5.88
0.90
118.30
112.42
A
A
A
CB
CG
OD2
ASP
ASP
ASP
144
144
144
N
31
-6.03
0.90
118.30
112.27
A
A
A
CB
CG
OD2
ASP
ASP
ASP
134
134
134
N
31
3.88
0.50
120.30
124.18
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
31
-5.90
0.90
118.30
112.40
A
A
A
CB
CG
OD2
ASP
ASP
ASP
144
144
144
N
32
-5.96
0.90
118.30
112.34
A
A
A
CB
CG
OD2
ASP
ASP
ASP
134
134
134
N
32
3.65
0.50
120.30
123.95
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
32
-6.05
0.90
118.30
112.25
A
A
A
CB
CG
OD2
ASP
ASP
ASP
144
144
144
N
33
-5.97
0.90
118.30
112.33
A
A
A
CB
CG
OD2
ASP
ASP
ASP
134
134
134
N
33
3.84
0.50
120.30
124.14
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
33
-6.00
0.90
118.30
112.30
A
A
A
CB
CG
OD2
ASP
ASP
ASP
144
144
144
N
1
A
A
C
OXT
ASP
ASP
144
144
0.143
0.019
1.229
1.372
N
2
A
A
C
OXT
ASP
ASP
144
144
0.147
0.019
1.229
1.376
N
3
A
A
C
OXT
ASP
ASP
144
144
0.146
0.019
1.229
1.375
N
4
A
A
C
OXT
ASP
ASP
144
144
0.146
0.019
1.229
1.375
N
5
A
A
C
OXT
ASP
ASP
144
144
0.143
0.019
1.229
1.372
N
6
A
A
C
OXT
ASP
ASP
144
144
0.143
0.019
1.229
1.372
N
7
A
A
C
OXT
ASP
ASP
144
144
0.143
0.019
1.229
1.372
N
8
A
A
C
OXT
ASP
ASP
144
144
0.146
0.019
1.229
1.375
N
9
A
A
C
OXT
ASP
ASP
144
144
0.145
0.019
1.229
1.374
N
10
A
A
C
OXT
ASP
ASP
144
144
0.143
0.019
1.229
1.372
N
11
A
A
C
OXT
ASP
ASP
144
144
0.143
0.019
1.229
1.372
N
12
A
A
C
OXT
ASP
ASP
144
144
0.142
0.019
1.229
1.371
N
13
A
A
C
OXT
ASP
ASP
144
144
0.143
0.019
1.229
1.372
N
14
A
A
C
OXT
ASP
ASP
144
144
0.147
0.019
1.229
1.376
N
15
A
A
C
OXT
ASP
ASP
144
144
0.144
0.019
1.229
1.373
N
16
A
A
C
OXT
ASP
ASP
144
144
0.142
0.019
1.229
1.371
N
17
A
A
C
OXT
ASP
ASP
144
144
0.144
0.019
1.229
1.373
N
18
A
A
C
OXT
ASP
ASP
144
144
0.146
0.019
1.229
1.375
N
19
A
A
C
OXT
ASP
ASP
144
144
0.146
0.019
1.229
1.375
N
20
A
A
C
OXT
ASP
ASP
144
144
0.147
0.019
1.229
1.376
N
21
A
A
C
OXT
ASP
ASP
144
144
0.143
0.019
1.229
1.372
N
22
A
A
C
OXT
ASP
ASP
144
144
0.143
0.019
1.229
1.372
N
23
A
A
C
OXT
ASP
ASP
144
144
0.142
0.019
1.229
1.371
N
24
A
A
C
OXT
ASP
ASP
144
144
0.143
0.019
1.229
1.372
N
25
A
A
C
OXT
ASP
ASP
144
144
0.146
0.019
1.229
1.375
N
26
A
A
C
OXT
ASP
ASP
144
144
0.144
0.019
1.229
1.373
N
27
A
A
C
OXT
ASP
ASP
144
144
0.147
0.019
1.229
1.376
N
28
A
A
C
OXT
ASP
ASP
144
144
0.143
0.019
1.229
1.372
N
29
A
A
C
OXT
ASP
ASP
144
144
0.146
0.019
1.229
1.375
N
30
A
A
C
OXT
ASP
ASP
144
144
0.146
0.019
1.229
1.375
N
31
A
A
C
OXT
ASP
ASP
144
144
0.143
0.019
1.229
1.372
N
32
A
A
C
OXT
ASP
ASP
144
144
0.147
0.019
1.229
1.376
N
33
A
A
C
OXT
ASP
ASP
144
144
0.142
0.019
1.229
1.371
N
1
A
CYS
129
-78.70
-83.33
1
A
THR
131
-140.81
-63.77
1
A
VAL
133
-84.35
-94.01
2
A
THR
131
-129.54
-69.41
3
A
THR
131
-138.53
-55.70
3
A
CYS
142
-96.92
-68.57
4
A
THR
131
-130.42
-67.89
5
A
THR
131
-106.48
-66.47
6
A
THR
131
-129.82
-55.19
7
A
THR
131
-130.49
-79.18
8
A
THR
131
-130.67
-68.35
9
A
THR
132
-88.79
-98.67
9
A
VAL
133
-162.30
84.99
9
A
ASP
134
-150.97
87.91
10
A
CYS
129
-75.10
-72.05
10
A
THR
132
-85.15
-88.83
10
A
VAL
133
-154.03
52.48
11
A
THR
131
-135.25
-68.84
12
A
THR
131
-148.11
-63.72
12
A
THR
143
-96.13
-66.04
13
A
THR
131
-127.15
-80.50
13
A
CYS
142
-99.78
-77.73
16
A
THR
131
-141.86
-68.98
17
A
THR
131
-130.36
-80.04
18
A
THR
131
-134.99
-68.93
19
A
THR
131
-133.36
-70.92
19
A
CYS
142
-90.76
-69.79
20
A
THR
131
-137.36
-52.72
20
A
VAL
133
-100.25
75.00
20
A
ASP
134
-164.16
117.01
20
A
CYS
142
-93.65
-75.35
21
A
THR
131
-133.99
-73.27
22
A
THR
131
-135.55
-74.39
22
A
VAL
133
-61.57
97.82
23
A
THR
131
-142.98
-70.87
24
A
THR
131
-131.87
-78.38
25
A
THR
131
-143.13
-71.04
25
A
ASP
134
-170.57
93.95
26
A
THR
131
-103.78
-66.96
26
A
CYS
142
-125.80
-60.59
27
A
THR
131
-129.81
-70.13
28
A
THR
131
-120.79
-75.64
29
A
THR
131
-132.23
-57.18
30
A
THR
131
-122.54
-74.76
32
A
THR
131
-132.14
-78.17
KB7 PILIN, TRANS
A COMPARISON OF NMR SOLUTION STRUCTURES OF THE RECEPTOR BINDING DOMAINS OF PSEUDOMONAS AERUGINOSA PILI STRAINS PAO, KB7, AND PAK: IMPLICATIONS FOR RECEPTOR BINDING AND SYNTHETIC VACCINE DESIGN
1
Y
N
disulf
1.993
A
CYS
129
A
SG
CYS
3
1_555
A
CYS
142
A
SG
CYS
16
1_555
covale
1.342
A
ACE
127
A
C
ACE
1
1_555
A
SER
128
A
N
SER
2
1_555
FIMBRIAL PROTEIN
FIMBRIAL PROTEIN
FMK7_PSEAE
UNP
1
1
Q53391
DVNGGWSCATTVDAKFRPNGCTD
7
23
1KB8
128
144
Q53391
A
1
2
18
BINDING SITE FOR RESIDUE ACE A 127
Software
1
A
ASP
144
A
ASP
18
1
1_555
1
P 1