1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Tisne, C. Hantz, E. Hartmann, B. Delepierre, M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking N 1 N O N 2 N P N 3 N O N 4 N O N 5 N O N 6 N C N 7 R C N 8 N O N 9 S C N 10 N O N 11 N C N 12 R C Y 13 N N Y 14 N C Y 15 N N Y 16 N C Y 17 N C N 18 N N Y 19 N N Y 20 N C Y 21 N N Y 22 N C N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N O N 38 N P N 39 N O N 40 N O N 41 N O N 42 N C N 43 R C N 44 N O N 45 S C N 46 N O N 47 N C N 48 R C N 49 N N N 50 N C N 51 N O N 52 N N N 53 N C N 54 N N N 55 N C N 56 N C N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N O N 72 N P N 73 N O N 74 N O N 75 N O N 76 N C N 77 R C N 78 N O N 79 S C N 80 N O N 81 N C N 82 R C Y 83 N N Y 84 N C Y 85 N N Y 86 N C N 87 N C N 88 N O N 89 N N N 90 N C N 91 N N N 92 N N Y 93 N C N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N O N 109 N P N 110 N O N 111 N O N 112 N O N 113 N C N 114 R C N 115 N O N 116 S C N 117 N O N 118 N C N 119 R C N 120 N N N 121 N C N 122 N O N 123 N N N 124 N C N 125 N O N 126 N C N 127 N C N 128 N C N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing Y 24 N sing Y 25 N sing Y 26 N doub N 27 N sing Y 28 N sing Y 29 N sing Y 30 N doub N 31 N sing Y 32 N doub N 33 N sing N 34 N sing Y 35 N sing Y 36 N doub N 37 N sing Y 38 N sing N 39 N sing N 40 N sing N 41 N doub N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N doub N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N doub N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing Y 97 N sing Y 98 N sing Y 99 N doub N 100 N sing Y 101 N sing N 102 N sing Y 103 N doub N 104 N doub N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N doub N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N doub N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N doub N 139 N sing N 140 N sing N 141 N sing N 142 N doub N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing UK J.Mol.Biol. JMOBAK 0070 0022-2836 279 127 142 10.1006/jmbi.1998.1757 9636705 Solution structure of a non-palindromic 16 base-pair DNA related to the HIV-1 kappa B site: evidence for BI-BII equilibrium inducing a global dynamic curvature of the duplex. 1998 10.2210/pdb1kbd/pdb pdb_00001kbd 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 4930.189 DNA (5'-D(*CP*TP*GP*GP*GP*GP*AP*CP*TP*TP*TP*CP*CP*AP*GP*G)-3') 1 syn polymer 4868.169 DNA (5'-D(*CP*CP*TP*GP*GP*AP*AP*AP*GP*TP*CP*CP*CP*CP*AP*G)-3') 1 syn polymer HIV-1 KAPA-B SITE HIV-1 KAPA-B SITE no no (DC)(DT)(DG)(DG)(DG)(DG)(DA)(DC)(DT)(DT)(DT)(DC)(DC)(DA)(DG)(DG) CTGGGGACTTTCCAGG A polydeoxyribonucleotide no no (DC)(DC)(DT)(DG)(DG)(DA)(DA)(DA)(DG)(DT)(DC)(DC)(DC)(DC)(DA)(DG) CCTGGAAAGTCCCCAG B polydeoxyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n -20.083 1 19 A 1 B 32 -1.175 A_DC1:DG32_B 1 10.261 0.273 0.486 -0.020 -7.230 1 20 A 2 B 31 -5.816 A_DT2:DA31_B 2 -18.330 -0.250 0.152 0.017 9.595 1 19 A 3 B 30 -0.658 A_DG3:DC30_B 3 6.628 -0.301 0.122 -0.056 15.992 1 19 A 4 B 29 -1.480 A_DG4:DC29_B 4 13.301 -0.327 0.139 -0.037 7.118 1 19 A 5 B 28 -1.044 A_DG5:DC28_B 5 9.943 -0.458 -0.037 -0.103 -0.343 1 19 A 6 B 27 -0.980 A_DG6:DC27_B 6 5.717 -0.417 -0.111 -0.091 -1.348 1 20 A 7 B 26 -1.241 A_DA7:DT26_B 7 -0.427 0.132 -0.181 -0.007 -3.598 1 19 A 8 B 25 -1.157 A_DC8:DG25_B 8 3.171 0.427 0.085 -0.097 -15.009 1 20 A 9 B 24 -2.430 A_DT9:DA24_B 9 -6.236 -0.062 0.132 0.021 -6.569 1 20 A 10 B 23 -1.823 A_DT10:DA23_B 10 -10.101 -0.118 -0.061 -0.004 0.756 1 20 A 11 B 22 -1.464 A_DT11:DA22_B 11 -9.614 -0.161 -0.273 -0.005 2.712 1 19 A 12 B 21 -1.179 A_DC12:DG21_B 12 0.373 0.435 -0.276 -0.103 -10.084 1 19 A 13 B 20 -1.340 A_DC13:DG20_B 13 8.618 0.321 0.084 -0.056 0.083 1 20 A 14 B 19 -2.830 A_DA14:DT19_B 14 -6.529 0.053 -0.016 -0.004 8.117 1 19 A 15 B 18 -1.266 A_DG15:DC18_B 15 0.105 -0.301 0.169 -0.064 10.227 1 19 A 16 B 17 -1.231 A_DG16:DC17_B 16 9.592 -0.388 0.088 -0.073 2.898 39.809 A A 1 2 -28.454 B B 32 31 3.211 -18.634 -1.678 -0.500 AA_DC1DT2:DA31DG32_BB 1 4.215 -6.436 35.089 1.423 2.953 3.158 35.982 A A 2 3 -20.500 B B 31 30 3.339 -12.419 1.919 -0.133 AA_DT2DG3:DC30DA31_BB 2 -0.629 1.039 33.832 1.600 -3.198 3.484 36.115 A A 3 4 -9.878 B B 30 29 3.381 -6.095 0.166 -0.953 AA_DG3DG4:DC29DC30_BB 3 -1.267 2.053 35.592 -0.627 -0.458 4.370 35.863 A A 4 5 -23.321 B B 29 28 3.943 -14.000 0.376 -1.879 AA_DG4DG5:DC28DC29_BB 4 1.111 -1.851 33.083 -0.390 -0.400 4.196 36.660 A A 5 6 -19.848 B B 28 27 3.853 -12.246 0.167 -1.700 AA_DG5DG6:DC27DC28_BB 5 3.019 -4.894 34.492 -0.570 0.260 3.469 36.785 A A 6 7 -4.494 B B 27 26 3.399 -2.829 0.069 -1.185 AA_DG6DA7:DT26DC27_BB 6 3.622 -5.753 36.506 -1.472 0.410 3.663 36.580 A A 7 8 -8.470 B B 26 25 3.525 -5.291 0.004 -1.344 AA_DA7DC8:DG25DT26_BB 7 -3.460 5.538 36.048 -1.335 -0.533 4.060 32.851 A A 8 9 -12.593 B B 25 24 3.788 -7.069 -0.651 -1.762 AA_DC8DT9:DA24DG25_BB 8 0.639 -1.138 32.096 -1.646 1.284 3.150 38.164 A A 9 10 -12.995 B B 24 23 3.124 -8.431 -0.367 -0.513 AA_DT9DT10:DA23DA24_BB 9 1.113 -1.716 37.239 0.249 0.697 3.073 39.464 A A 10 11 -7.215 B B 23 22 3.067 -4.859 0.188 -0.194 AA_DT10DT11:DA22DA23_BB 10 1.326 -1.968 39.154 0.253 -0.131 3.247 36.171 A A 11 12 0.833 B B 22 21 3.283 0.517 0.749 -0.874 AA_DT11DC12:DG21DA22_BB 11 -1.083 1.745 36.152 -1.480 -1.358 3.526 33.100 A A 12 13 5.075 B B 21 20 3.690 2.881 -0.229 -1.787 AA_DC12DC13:DG20DG21_BB 12 -4.021 7.083 32.739 -3.676 -0.351 3.520 28.509 A A 13 14 -11.651 B B 20 19 3.314 -5.673 -0.403 -1.979 AA_DC13DA14:DT19DG20_BB 13 4.910 -10.084 27.524 -2.641 2.011 3.229 29.423 A A 14 15 -3.189 B B 19 18 3.168 -1.619 0.488 -1.320 AA_DA14DG15:DC18DT19_BB 14 -0.314 0.619 29.378 -2.260 -1.026 3.719 37.743 A A 15 16 -15.206 B B 18 17 3.473 -9.733 0.655 -1.378 AA_DG15DG16:DC17DC18_BB 15 0.783 -1.224 36.503 -0.723 -0.900 database_2 pdbx_struct_assembly pdbx_struct_oper_list chem_comp_atom chem_comp_bond repository Initial release Version format compliance Version format compliance Database references Derived calculations Data collection 1 0 1998-12-02 1 1 2008-04-26 1 2 2011-07-13 1 3 2022-02-23 1 4 2023-12-27 _database_2.pdbx_DOI _database_2.pdbx_database_accession PDBE Y RCSB 1998-11-28 REL ENERGY 3 NOESY 7.0 308.0 K BOELENS ET AL. refinement IRMA structure calculation JUMNA 500 Varian UNITY C 1 n 1 DC 1 A T 2 n 2 DT 2 A G 3 n 3 DG 3 A G 4 n 4 DG 4 A G 5 n 5 DG 5 A G 6 n 6 DG 6 A A 7 n 7 DA 7 A C 8 n 8 DC 8 A T 9 n 9 DT 9 A T 10 n 10 DT 10 A T 11 n 11 DT 11 A C 12 n 12 DC 12 A C 13 n 13 DC 13 A A 14 n 14 DA 14 A G 15 n 15 DG 15 A G 16 n 16 DG 16 A C 17 n 1 DC 17 B C 18 n 2 DC 18 B T 19 n 3 DT 19 B G 20 n 4 DG 20 B G 21 n 5 DG 21 B A 22 n 6 DA 22 B A 23 n 7 DA 23 B A 24 n 8 DA 24 B G 25 n 9 DG 25 B T 26 n 10 DT 26 B C 27 n 11 DC 27 B C 28 n 12 DC 28 B C 29 n 13 DC 29 B C 30 n 14 DC 30 B A 31 n 15 DA 31 B G 32 n 16 DG 32 B author_defined_assembly 2 dimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A O5' DC 1 A O5' DC 1 1 Y 1 B O5' DC 17 B O5' DC 1 1 Y 2 A O5' DC 1 A O5' DC 1 1 Y 2 B O5' DC 17 B O5' DC 1 1 Y 3 A O5' DC 1 A O5' DC 1 1 Y 3 B O5' DC 17 B O5' DC 1 1 Y 1 2.69 0.30 108.30 110.99 A A A O4' C1' N1 DC DC DC 1 1 1 N 1 2.64 0.30 108.30 110.94 A A A O4' C1' N1 DT DT DT 2 2 2 N 1 4.21 0.30 108.30 112.51 A A A O4' C1' N9 DG DG DG 3 3 3 N 1 3.07 0.30 108.30 111.37 A A A O4' C1' N9 DG DG DG 4 4 4 N 1 3.19 0.30 108.30 111.49 A A A O4' C1' N9 DG DG DG 5 5 5 N 1 3.17 0.30 108.30 111.47 A A A O4' C1' N9 DG DG DG 6 6 6 N 1 3.28 0.30 108.30 111.58 A A A O4' C1' N9 DA DA DA 7 7 7 N 1 3.39 0.30 108.30 111.69 A A A O4' C1' N1 DC DC DC 8 8 8 N 1 3.06 0.30 108.30 111.36 A A A O4' C1' N1 DT DT DT 9 9 9 N 1 2.95 0.30 108.30 111.25 A A A O4' C1' N1 DT DT DT 10 10 10 N 1 2.78 0.30 108.30 111.08 A A A O4' C1' N1 DT DT DT 11 11 11 N 1 3.90 0.30 108.30 112.20 A A A O4' C1' N1 DC DC DC 12 12 12 N 1 3.28 0.30 108.30 111.58 A A A O4' C1' N1 DC DC DC 13 13 13 N 1 3.48 0.30 108.30 111.78 A A A O4' C1' N9 DA DA DA 14 14 14 N 1 3.85 0.30 108.30 112.15 A A A O4' C1' N9 DG DG DG 15 15 15 N 1 3.06 0.30 108.30 111.36 A A A O4' C1' N9 DG DG DG 16 16 16 N 1 3.35 0.30 108.30 111.65 B B B O4' C1' N1 DC DC DC 17 17 17 N 1 2.81 0.30 108.30 111.11 B B B O4' C1' N1 DC DC DC 18 18 18 N 1 3.36 0.30 108.30 111.66 B B B O4' C1' N1 DT DT DT 19 19 19 N 1 3.88 0.30 108.30 112.18 B B B O4' C1' N9 DG DG DG 20 20 20 N 1 3.28 0.30 108.30 111.58 B B B O4' C1' N9 DG DG DG 21 21 21 N 1 2.84 0.30 108.30 111.14 B B B O4' C1' N9 DA DA DA 22 22 22 N 1 2.70 0.30 108.30 111.00 B B B O4' C1' N9 DA DA DA 23 23 23 N 1 3.24 0.30 108.30 111.54 B B B O4' C1' N9 DA DA DA 24 24 24 N 1 3.58 0.30 108.30 111.88 B B B O4' C1' N9 DG DG DG 25 25 25 N 1 3.21 0.30 108.30 111.51 B B B O4' C1' N1 DT DT DT 26 26 26 N 1 3.27 0.30 108.30 111.57 B B B O4' C1' N1 DC DC DC 27 27 27 N 1 3.22 0.30 108.30 111.52 B B B O4' C1' N1 DC DC DC 28 28 28 N 1 3.13 0.30 108.30 111.43 B B B O4' C1' N1 DC DC DC 29 29 29 N 1 3.17 0.30 108.30 111.47 B B B O4' C1' N1 DC DC DC 30 30 30 N 1 2.56 0.30 108.30 110.86 B B B O4' C1' N9 DA DA DA 31 31 31 N 1 3.30 0.30 108.30 111.60 B B B O4' C1' N9 DG DG DG 32 32 32 N 2 3.37 0.30 108.30 111.67 A A A O4' C1' N1 DC DC DC 1 1 1 N 2 2.54 0.30 108.30 110.84 A A A O4' C1' N1 DT DT DT 2 2 2 N 2 -5.60 0.80 105.90 100.30 A A A O4' C1' C2' DG DG DG 3 3 3 N 2 4.45 0.30 108.30 112.75 A A A O4' C1' N9 DG DG DG 3 3 3 N 2 2.52 0.30 108.30 110.82 A A A O4' C1' N9 DG DG DG 4 4 4 N 2 3.20 0.30 108.30 111.50 A A A O4' C1' N9 DG DG DG 5 5 5 N 2 2.81 0.30 108.30 111.11 A A A O4' C1' N9 DG DG DG 6 6 6 N 2 3.21 0.30 108.30 111.51 A A A O4' C1' N9 DA DA DA 7 7 7 N 2 3.22 0.30 108.30 111.52 A A A O4' C1' N1 DC DC DC 8 8 8 N 2 2.76 0.30 108.30 111.06 A A A O4' C1' N1 DT DT DT 9 9 9 N 2 2.81 0.30 108.30 111.11 A A A O4' C1' N1 DT DT DT 10 10 10 N 2 2.34 0.30 108.30 110.64 A A A O4' C1' N1 DT DT DT 11 11 11 N 2 -5.22 0.80 105.90 100.68 A A A O4' C1' C2' DC DC DC 12 12 12 N 2 4.34 0.30 108.30 112.64 A A A O4' C1' N1 DC DC DC 12 12 12 N 2 2.97 0.30 108.30 111.27 A A A O4' C1' N1 DC DC DC 13 13 13 N 2 3.29 0.30 108.30 111.59 A A A O4' C1' N9 DA DA DA 14 14 14 N 2 4.10 0.30 108.30 112.40 A A A O4' C1' N9 DG DG DG 15 15 15 N 2 2.55 0.30 108.30 110.85 A A A O4' C1' N9 DG DG DG 16 16 16 N 2 3.71 0.30 108.30 112.01 B B B O4' C1' N1 DC DC DC 17 17 17 N 2 2.56 0.30 108.30 110.86 B B B O4' C1' N1 DC DC DC 18 18 18 N 2 3.25 0.30 108.30 111.55 B B B O4' C1' N1 DT DT DT 19 19 19 N 2 4.03 0.30 108.30 112.33 B B B O4' C1' N9 DG DG DG 20 20 20 N 2 2.82 0.30 108.30 111.12 B B B O4' C1' N9 DG DG DG 21 21 21 N 2 3.01 0.30 108.30 111.31 B B B O4' C1' N9 DA DA DA 22 22 22 N 2 2.39 0.30 108.30 110.69 B B B O4' C1' N9 DA DA DA 23 23 23 N 2 3.14 0.30 108.30 111.44 B B B O4' C1' N9 DA DA DA 24 24 24 N 2 3.49 0.30 108.30 111.79 B B B O4' C1' N9 DG DG DG 25 25 25 N 2 2.71 0.30 108.30 111.01 B B B O4' C1' N1 DT DT DT 26 26 26 N 2 3.63 0.30 108.30 111.93 B B B O4' C1' N1 DC DC DC 27 27 27 N 2 2.81 0.30 108.30 111.11 B B B O4' C1' N1 DC DC DC 28 28 28 N 2 2.93 0.30 108.30 111.23 B B B O4' C1' N1 DC DC DC 29 29 29 N 2 3.24 0.30 108.30 111.54 B B B O4' C1' N1 DC DC DC 30 30 30 N 2 2.32 0.30 108.30 110.62 B B B O4' C1' N9 DA DA DA 31 31 31 N 2 3.55 0.30 108.30 111.85 B B B O4' C1' N9 DG DG DG 32 32 32 N 3 2.75 0.30 108.30 111.05 A A A O4' C1' N1 DC DC DC 1 1 1 N 3 2.68 0.30 108.30 110.98 A A A O4' C1' N1 DT DT DT 2 2 2 N 3 -5.62 0.80 105.90 100.28 A A A O4' C1' C2' DG DG DG 3 3 3 N 3 4.44 0.30 108.30 112.74 A A A O4' C1' N9 DG DG DG 3 3 3 N 3 2.67 0.30 108.30 110.97 A A A O4' C1' N9 DG DG DG 4 4 4 N 3 3.12 0.30 108.30 111.42 A A A O4' C1' N9 DG DG DG 5 5 5 N 3 2.76 0.30 108.30 111.06 A A A O4' C1' N9 DG DG DG 6 6 6 N 3 3.07 0.30 108.30 111.37 A A A O4' C1' N9 DA DA DA 7 7 7 N 3 3.23 0.30 108.30 111.53 A A A O4' C1' N1 DC DC DC 8 8 8 N 3 2.62 0.30 108.30 110.92 A A A O4' C1' N1 DT DT DT 9 9 9 N 3 2.72 0.30 108.30 111.02 A A A O4' C1' N1 DT DT DT 10 10 10 N 3 2.32 0.30 108.30 110.62 A A A O4' C1' N1 DT DT DT 11 11 11 N 3 4.15 0.30 108.30 112.45 A A A O4' C1' N1 DC DC DC 12 12 12 N 3 3.15 0.30 108.30 111.45 A A A O4' C1' N1 DC DC DC 13 13 13 N 3 2.97 0.30 108.30 111.27 A A A O4' C1' N9 DA DA DA 14 14 14 N 3 3.73 0.30 108.30 112.03 A A A O4' C1' N9 DG DG DG 15 15 15 N 3 2.23 0.30 108.30 110.53 A A A O4' C1' N9 DG DG DG 16 16 16 N 3 2.99 0.30 108.30 111.29 B B B O4' C1' N1 DC DC DC 17 17 17 N 3 2.42 0.30 108.30 110.72 B B B O4' C1' N1 DC DC DC 18 18 18 N 3 3.95 0.30 108.30 112.25 B B B O4' C1' N1 DT DT DT 19 19 19 N 3 4.20 0.30 108.30 112.50 B B B O4' C1' N9 DG DG DG 20 20 20 N 3 2.52 0.30 108.30 110.82 B B B O4' C1' N9 DG DG DG 21 21 21 N 3 2.76 0.30 108.30 111.06 B B B O4' C1' N9 DA DA DA 22 22 22 N 3 2.40 0.30 108.30 110.70 B B B O4' C1' N9 DA DA DA 23 23 23 N 3 3.15 0.30 108.30 111.45 B B B O4' C1' N9 DA DA DA 24 24 24 N 3 3.51 0.30 108.30 111.81 B B B O4' C1' N9 DG DG DG 25 25 25 N 3 2.63 0.30 108.30 110.93 B B B O4' C1' N1 DT DT DT 26 26 26 N 3 3.39 0.30 108.30 111.69 B B B O4' C1' N1 DC DC DC 27 27 27 N 3 2.84 0.30 108.30 111.14 B B B O4' C1' N1 DC DC DC 28 28 28 N 3 2.97 0.30 108.30 111.27 B B B O4' C1' N1 DC DC DC 29 29 29 N 3 3.16 0.30 108.30 111.46 B B B O4' C1' N1 DC DC DC 30 30 30 N 3 2.35 0.30 108.30 110.65 B B B O4' C1' N9 DA DA DA 31 31 31 N 3 3.57 0.30 108.30 111.87 B B B O4' C1' N9 DG DG DG 32 32 32 N SOLUTION STRUCTURE OF A 16 BASE-PAIR DNA RELATED TO THE HIV-1 KAPPA B SITE 1 N N 2 N N hydrog WATSON-CRICK A DC 1 A N3 DC 1 1_555 B DG 32 B N1 DG 16 1_555 hydrog WATSON-CRICK A DC 1 A N4 DC 1 1_555 B DG 32 B O6 DG 16 1_555 hydrog WATSON-CRICK A DC 1 A O2 DC 1 1_555 B DG 32 B N2 DG 16 1_555 hydrog WATSON-CRICK A DT 2 A N3 DT 2 1_555 B DA 31 B N1 DA 15 1_555 hydrog WATSON-CRICK A DT 2 A O4 DT 2 1_555 B DA 31 B N6 DA 15 1_555 hydrog WATSON-CRICK A DG 3 A N1 DG 3 1_555 B DC 30 B N3 DC 14 1_555 hydrog WATSON-CRICK A DG 3 A N2 DG 3 1_555 B DC 30 B O2 DC 14 1_555 hydrog WATSON-CRICK A DG 3 A O6 DG 3 1_555 B DC 30 B N4 DC 14 1_555 hydrog WATSON-CRICK A DG 4 A N1 DG 4 1_555 B DC 29 B N3 DC 13 1_555 hydrog WATSON-CRICK A DG 4 A N2 DG 4 1_555 B DC 29 B O2 DC 13 1_555 hydrog WATSON-CRICK A DG 4 A O6 DG 4 1_555 B DC 29 B N4 DC 13 1_555 hydrog WATSON-CRICK A DG 5 A N1 DG 5 1_555 B DC 28 B N3 DC 12 1_555 hydrog WATSON-CRICK A DG 5 A N2 DG 5 1_555 B DC 28 B O2 DC 12 1_555 hydrog WATSON-CRICK A DG 5 A O6 DG 5 1_555 B DC 28 B N4 DC 12 1_555 hydrog WATSON-CRICK A DG 6 A N1 DG 6 1_555 B DC 27 B N3 DC 11 1_555 hydrog WATSON-CRICK A DG 6 A N2 DG 6 1_555 B DC 27 B O2 DC 11 1_555 hydrog WATSON-CRICK A DG 6 A O6 DG 6 1_555 B DC 27 B N4 DC 11 1_555 hydrog WATSON-CRICK A DA 7 A N1 DA 7 1_555 B DT 26 B N3 DT 10 1_555 hydrog WATSON-CRICK A DA 7 A N6 DA 7 1_555 B DT 26 B O4 DT 10 1_555 hydrog WATSON-CRICK A DC 8 A N3 DC 8 1_555 B DG 25 B N1 DG 9 1_555 hydrog WATSON-CRICK A DC 8 A N4 DC 8 1_555 B DG 25 B O6 DG 9 1_555 hydrog WATSON-CRICK A DC 8 A O2 DC 8 1_555 B DG 25 B N2 DG 9 1_555 hydrog WATSON-CRICK A DT 9 A N3 DT 9 1_555 B DA 24 B N1 DA 8 1_555 hydrog WATSON-CRICK A DT 9 A O4 DT 9 1_555 B DA 24 B N6 DA 8 1_555 hydrog WATSON-CRICK A DT 10 A N3 DT 10 1_555 B DA 23 B N1 DA 7 1_555 hydrog WATSON-CRICK A DT 10 A O4 DT 10 1_555 B DA 23 B N6 DA 7 1_555 hydrog WATSON-CRICK A DT 11 A N3 DT 11 1_555 B DA 22 B N1 DA 6 1_555 hydrog WATSON-CRICK A DT 11 A O4 DT 11 1_555 B DA 22 B N6 DA 6 1_555 hydrog WATSON-CRICK A DC 12 A N3 DC 12 1_555 B DG 21 B N1 DG 5 1_555 hydrog WATSON-CRICK A DC 12 A N4 DC 12 1_555 B DG 21 B O6 DG 5 1_555 hydrog WATSON-CRICK A DC 12 A O2 DC 12 1_555 B DG 21 B N2 DG 5 1_555 hydrog WATSON-CRICK A DC 13 A N3 DC 13 1_555 B DG 20 B N1 DG 4 1_555 hydrog WATSON-CRICK A DC 13 A N4 DC 13 1_555 B DG 20 B O6 DG 4 1_555 hydrog WATSON-CRICK A DC 13 A O2 DC 13 1_555 B DG 20 B N2 DG 4 1_555 hydrog WATSON-CRICK A DA 14 A N1 DA 14 1_555 B DT 19 B N3 DT 3 1_555 hydrog WATSON-CRICK A DA 14 A N6 DA 14 1_555 B DT 19 B O4 DT 3 1_555 hydrog WATSON-CRICK A DG 15 A N1 DG 15 1_555 B DC 18 B N3 DC 2 1_555 hydrog WATSON-CRICK A DG 15 A N2 DG 15 1_555 B DC 18 B O2 DC 2 1_555 hydrog WATSON-CRICK A DG 15 A O6 DG 15 1_555 B DC 18 B N4 DC 2 1_555 hydrog WATSON-CRICK A DG 16 A N1 DG 16 1_555 B DC 17 B N3 DC 1 1_555 hydrog WATSON-CRICK A DG 16 A N2 DG 16 1_555 B DC 17 B O2 DC 1 1_555 hydrog WATSON-CRICK A DG 16 A O6 DG 16 1_555 B DC 17 B N4 DC 1 1_555 DNA DNA STRUCTURE, MODELING, DEOXYRIBONUCLEIC ACID, DNA 1KBD PDB 1 1KBD 1KBD PDB 2 1KBD 1 16 1KBD 1 16 1KBD A 1 1 16 17 32 1KBD 17 32 1KBD B 2 1 16 1 P 1