0.033070
0.019093
0.000000
0.000000
0.038186
0.000000
0.000000
0.000000
0.025419
0.000000
0.000000
0.000000
Adams, A.
Guss, J.M.
Denny, W.A.
Wakelin, L.P.G.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
30.239
30.239
39.340
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C20 H22 N4 O2
350.414
9-AMINO-N-[2-(4-MORPHOLINYL)ETHYL]-4-ACRIDINECARBOXAMIDE
non-polymer
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
H2 O
18.015
WATER
non-polymer
N
1
N
O
N
2
N
P
N
3
N
O
N
4
N
O
N
5
N
O
N
6
N
C
N
7
R
C
N
8
N
O
N
9
S
C
N
10
N
O
N
11
N
C
N
12
R
C
Y
13
N
N
Y
14
N
C
Y
15
N
N
Y
16
N
C
Y
17
N
C
N
18
N
N
Y
19
N
N
Y
20
N
C
Y
21
N
N
Y
22
N
C
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
O
N
38
N
P
N
39
N
O
N
40
N
O
N
41
N
O
N
42
N
C
N
43
R
C
N
44
N
O
N
45
S
C
N
46
N
O
N
47
N
C
N
48
R
C
N
49
N
N
N
50
N
C
N
51
N
O
N
52
N
N
N
53
N
C
N
54
N
N
N
55
N
C
N
56
N
C
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
O
N
72
N
P
N
73
N
O
N
74
N
O
N
75
N
O
N
76
N
C
N
77
R
C
N
78
N
O
N
79
S
C
N
80
N
O
N
81
N
C
N
82
R
C
Y
83
N
N
Y
84
N
C
Y
85
N
N
Y
86
N
C
N
87
N
C
N
88
N
O
N
89
N
N
N
90
N
C
N
91
N
N
N
92
N
N
Y
93
N
C
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
O
N
109
N
C
N
110
N
C
N
111
N
C
N
112
N
C
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
N
N
117
N
C
N
118
N
O
N
119
N
N
Y
120
N
C
Y
121
N
C
Y
122
N
C
Y
123
N
C
Y
124
N
C
Y
125
N
C
Y
126
N
C
Y
127
N
C
Y
128
N
C
Y
129
N
N
Y
130
N
C
Y
131
N
C
Y
132
N
C
Y
133
N
C
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
O
N
157
N
P
N
158
N
O
N
159
N
O
N
160
N
O
N
161
N
C
N
162
R
C
N
163
N
O
N
164
S
C
N
165
N
O
N
166
N
C
N
167
R
C
N
168
N
N
N
169
N
C
N
170
N
O
N
171
N
N
N
172
N
C
N
173
N
O
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
O
N
193
N
H
N
194
N
H
N
1
N
sing
N
2
N
sing
N
3
N
doub
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
Y
24
N
sing
Y
25
N
sing
Y
26
N
doub
N
27
N
sing
Y
28
N
sing
Y
29
N
sing
Y
30
N
doub
N
31
N
sing
Y
32
N
doub
N
33
N
sing
N
34
N
sing
Y
35
N
sing
Y
36
N
doub
N
37
N
sing
Y
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
doub
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
doub
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
doub
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
Y
97
N
sing
Y
98
N
sing
Y
99
N
doub
N
100
N
sing
Y
101
N
sing
N
102
N
sing
Y
103
N
doub
N
104
N
doub
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
doub
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
doub
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
Y
141
N
doub
Y
142
N
sing
Y
143
N
sing
N
144
N
sing
Y
145
N
doub
N
146
N
sing
Y
147
N
sing
N
148
N
sing
Y
149
N
doub
Y
150
N
sing
Y
151
N
sing
Y
152
N
doub
Y
153
N
sing
Y
154
N
sing
Y
155
N
doub
Y
156
N
sing
Y
157
N
doub
N
158
N
sing
Y
159
N
sing
N
160
N
sing
Y
161
N
doub
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
doub
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
doub
N
194
N
sing
N
195
N
sing
N
196
N
doub
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
UK
Nucleic Acids Res.
NARHAD
0389
0305-1048
30
719
725
10.1093/nar/30.3.719
11809884
Crystal structure of 9-amino-N-[2-(4-morpholinyl)ethyl]-4-acridinecarboxamide bound to d(CGTACG)2: implications for structure-activity relationships of acridinecarboxamide topoisomerase poisons.
2002
10.2210/pdb1kci/pdb
pdb_00001kci
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
110
1
focusing mirror
IMAGE PLATE
2000-08-01
RIGAKU RAXIS II
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
1809.217
5'-D(*CP*GP*TP*AP*CP*G)-3'
1
syn
polymer
350.414
9-AMINO-N-[2-(4-MORPHOLINYL)ETHYL]-4-ACRIDINECARBOXAMIDE
2
syn
non-polymer
18.015
water
20
nat
water
no
no
(DC)(DG)(DT)(DA)(DC)(DG)
CGTACG
A
polydeoxyribonucleotide
n
n
n
n
n
n
1
2.75
55.25
VAPOR DIFFUSION, SITTING DROP
6.0
cacodylate, spermine, KCl, MgCl2, MPD, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 285K
285
cacodylate
1
spermine
1
KCl
1
MgCl2
1
MPD
1
2.482
1
19
A
1001
A
1006
-2.502
A_DC1001:DG1006_A
1
-12.144
-0.068
0.020
-0.125
-6.840
1
19
A
1002
A
1005
1.355
A_DG1002:DC1005_A
2
-2.296
-0.211
-0.089
-0.102
2.803
1
20
A
1003
A
1004
-3.608
A_DT1003:DA1004_A
3
-11.915
-0.043
-0.027
-0.158
-2.803
1
20
A
1004
A
1003
-3.608
A_DA1004:DT1003_A
4
-11.915
0.043
-0.027
-0.158
6.840
1
19
A
1005
A
1002
1.355
A_DC1005:DG1002_A
5
-2.296
0.211
-0.089
-0.102
-2.482
1
19
A
1006
A
1001
-2.502
A_DG1006:DC1001_A
6
-12.144
0.068
0.020
-0.125
6.953
24.957
A
A
1001
1002
7.847
A
A
1006
1005
6.958
3.380
0.519
0.576
AA_DC1001DG1002:DC1005DG1006_AA
1
-0.791
1.836
24.718
-0.824
-1.705
3.070
28.579
A
A
1002
1003
6.253
A
A
1005
1004
3.091
3.081
-0.730
-0.071
AA_DG1002DT1003:DA1004DC1005_AA
2
-0.150
0.304
28.415
-0.804
1.446
3.178
48.040
A
A
1003
1004
-5.835
A
A
1004
1003
3.352
-4.743
0.000
1.714
AA_DT1003DA1004:DT1003DA1004_AA
3
0.000
0.000
47.819
2.479
0.000
3.070
28.579
A
A
1004
1005
6.253
A
A
1003
1002
3.091
3.081
0.730
-0.071
AA_DA1004DC1005:DG1002DT1003_AA
4
0.150
-0.304
28.415
-0.804
-1.446
6.953
24.957
A
A
1005
1006
7.847
A
A
1002
1001
6.958
3.380
-0.519
0.576
AA_DC1005DG1006:DC1001DG1002_AA
5
0.791
-1.836
24.718
-0.824
1.705
chem_comp_atom
chem_comp_bond
database_2
struct_site
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Refinement description
1
0
2002-02-01
1
1
2008-04-27
1
2
2011-07-13
1
3
2024-02-07
1
4
2024-04-03
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
5'-d(CpGpTpApCpG)-3', 9-amino-[N-(2-dimethylamino)ethyl]acridine-4-carboxamide
5'-d(CpGpTpApCpG)-3', 5-F-9-amino-[N-(2-dimethylamino)ethyl]acridine-4-carboxamide
5'-d(CG5BrUACG)-3', 6Br-9-amino-[N-(2-dimethylamino)ethyl]acridine-4-carboxamide
RCSB
Y
RCSB
2001-11-08
REL
REL
DRC
9-AMINO-N-[2-(4-MORPHOLINYL)ETHYL]-4-ACRIDINECARBOXAMIDE
HOH
water
465D
NDB entry DD0015
PDB
experimental model
DRC
3014
2
DRC
DRC
3014
A
DRC
3015
2
DRC
DRC
3015
A
HOH
4001
3
HOH
HOH
4001
A
HOH
4002
3
HOH
HOH
4002
A
HOH
4003
3
HOH
HOH
4003
A
HOH
4004
3
HOH
HOH
4004
A
HOH
4005
3
HOH
HOH
4005
A
HOH
4006
3
HOH
HOH
4006
A
HOH
4007
3
HOH
HOH
4007
A
HOH
4008
3
HOH
HOH
4008
A
HOH
4009
3
HOH
HOH
4009
A
HOH
4010
3
HOH
HOH
4010
A
HOH
4011
3
HOH
HOH
4011
A
HOH
4012
3
HOH
HOH
4012
A
HOH
4013
3
HOH
HOH
4013
A
HOH
4014
3
HOH
HOH
4014
A
HOH
4015
3
HOH
HOH
4015
A
HOH
4016
3
HOH
HOH
4016
A
HOH
4017
3
HOH
HOH
4017
A
HOH
4018
3
HOH
HOH
4018
A
HOH
4019
3
HOH
HOH
4019
A
HOH
4020
3
HOH
HOH
4020
A
C
1001
n
1
DC
1001
A
G
1002
n
2
DG
1002
A
T
1003
n
3
DT
1003
A
A
1004
n
4
DA
1004
A
C
1005
n
5
DC
1005
A
G
1006
n
6
DG
1006
A
0.2190000
0.2150000
0.2910000
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
4_655
-x+1,-y,z
crystal symmetry operation
30.2390000000
0.0000000000
0.0000000000
1
A
HOH
4009
D
HOH
1
A
HOH
4019
D
HOH
1
A
HOH
4020
D
HOH
1
-6.50
0.80
109.40
102.90
A
A
A
O5'
C5'
C4'
DC
DC
DC
1001
1001
1001
N
1
7.90
1.10
109.80
117.70
A
A
A
C5'
C4'
O4'
DC
DC
DC
1001
1001
1001
N
1
9.36
0.90
103.10
112.46
A
A
A
C4'
C3'
C2'
DC
DC
DC
1001
1001
1001
N
1
-6.89
0.80
102.40
95.51
A
A
A
C3'
C2'
C1'
DC
DC
DC
1001
1001
1001
N
1
4.77
0.50
106.80
111.57
A
A
A
O4'
C1'
C2'
DC
DC
DC
1001
1001
1001
N
1
-4.79
0.70
108.00
103.21
A
A
A
O4'
C1'
N1
DC
DC
DC
1001
1001
1001
N
1
-9.95
0.80
109.40
99.45
A
A
A
O5'
C5'
C4'
DG
DG
DG
1002
1002
1002
N
1
-11.67
1.60
120.90
109.23
A
A
A
P
O5'
C5'
DG
DG
DG
1002
1002
1002
N
1
9.32
1.10
109.80
119.12
A
A
A
C5'
C4'
O4'
DG
DG
DG
1002
1002
1002
N
1
7.86
0.90
103.10
110.96
A
A
A
C4'
C3'
C2'
DG
DG
DG
1002
1002
1002
N
1
-6.54
0.80
102.40
95.86
A
A
A
C3'
C2'
C1'
DG
DG
DG
1002
1002
1002
N
1
3.98
0.50
106.80
110.78
A
A
A
O4'
C1'
C2'
DG
DG
DG
1002
1002
1002
N
1
-10.78
0.80
109.40
98.62
A
A
A
O5'
C5'
C4'
DT
DT
DT
1003
1003
1003
N
1
-14.97
1.60
120.90
105.93
A
A
A
P
O5'
C5'
DT
DT
DT
1003
1003
1003
N
1
7.05
1.10
109.80
116.85
A
A
A
C5'
C4'
O4'
DT
DT
DT
1003
1003
1003
N
1
6.99
0.90
103.10
110.09
A
A
A
C4'
C3'
C2'
DT
DT
DT
1003
1003
1003
N
1
-11.19
0.80
102.40
91.21
A
A
A
C3'
C2'
C1'
DT
DT
DT
1003
1003
1003
N
1
3.13
0.50
106.80
109.93
A
A
A
O4'
C1'
C2'
DT
DT
DT
1003
1003
1003
N
1
11.51
1.20
119.70
131.21
A
A
A
C3'
O3'
P
DT
DT
DA
1003
1003
1004
Y
1
-9.54
0.80
109.40
99.86
A
A
A
O5'
C5'
C4'
DA
DA
DA
1004
1004
1004
N
1
7.20
1.10
109.80
117.00
A
A
A
C5'
C4'
O4'
DA
DA
DA
1004
1004
1004
N
1
8.07
0.90
103.10
111.17
A
A
A
C4'
C3'
C2'
DA
DA
DA
1004
1004
1004
N
1
-7.43
0.80
102.40
94.97
A
A
A
C3'
C2'
C1'
DA
DA
DA
1004
1004
1004
N
1
4.95
0.50
106.80
111.75
A
A
A
O4'
C1'
C2'
DA
DA
DA
1004
1004
1004
N
1
-8.65
0.80
109.40
100.75
A
A
A
O5'
C5'
C4'
DC
DC
DC
1005
1005
1005
N
1
-10.25
1.60
120.90
110.65
A
A
A
P
O5'
C5'
DC
DC
DC
1005
1005
1005
N
1
7.44
1.10
109.80
117.24
A
A
A
C5'
C4'
O4'
DC
DC
DC
1005
1005
1005
N
1
8.08
0.90
103.10
111.18
A
A
A
C4'
C3'
C2'
DC
DC
DC
1005
1005
1005
N
1
-9.82
0.80
102.40
92.58
A
A
A
C3'
C2'
C1'
DC
DC
DC
1005
1005
1005
N
1
-9.23
0.80
109.40
100.17
A
A
A
O5'
C5'
C4'
DG
DG
DG
1006
1006
1006
N
1
-15.44
1.60
120.90
105.46
A
A
A
P
O5'
C5'
DG
DG
DG
1006
1006
1006
N
1
7.34
0.90
103.10
110.44
A
A
A
C4'
C3'
C2'
DG
DG
DG
1006
1006
1006
N
1
-8.33
0.80
102.40
94.07
A
A
A
C3'
C2'
C1'
DG
DG
DG
1006
1006
1006
N
1
6.21
0.50
106.80
113.01
A
A
A
O4'
C1'
C2'
DG
DG
DG
1006
1006
1006
N
1
A
A
C2'
C1'
DC
DC
1001
1001
0.119
0.010
1.519
1.638
N
1
A
A
O4'
C1'
DC
DC
1001
1001
0.077
0.011
1.420
1.497
N
1
A
A
O3'
C3'
DC
DC
1001
1001
-0.054
0.006
1.419
1.365
N
1
A
A
O3'
P
DC
DG
1001
1002
0.113
0.012
1.607
1.720
Y
1
A
A
P
O5'
DG
DG
1002
1002
0.075
0.010
1.593
1.668
N
1
A
A
C2'
C1'
DG
DG
1002
1002
0.126
0.010
1.519
1.645
N
1
A
A
O3'
C3'
DG
DG
1002
1002
-0.062
0.006
1.419
1.357
N
1
A
A
O3'
P
DG
DT
1002
1003
0.118
0.012
1.607
1.725
Y
1
A
A
P
O5'
DT
DT
1003
1003
0.073
0.010
1.593
1.666
N
1
A
A
C2'
C1'
DT
DT
1003
1003
0.142
0.010
1.519
1.661
N
1
A
A
O3'
C3'
DT
DT
1003
1003
-0.070
0.006
1.419
1.349
N
1
A
A
O3'
P
DT
DA
1003
1004
0.110
0.012
1.607
1.717
Y
1
A
A
P
O5'
DA
DA
1004
1004
0.080
0.010
1.593
1.673
N
1
A
A
C2'
C1'
DA
DA
1004
1004
0.122
0.010
1.519
1.641
N
1
A
A
O3'
C3'
DA
DA
1004
1004
-0.057
0.006
1.419
1.362
N
1
A
A
O3'
P
DA
DC
1004
1005
0.132
0.012
1.607
1.739
Y
1
A
A
P
O5'
DC
DC
1005
1005
0.067
0.010
1.593
1.660
N
1
A
A
C2'
C1'
DC
DC
1005
1005
0.140
0.010
1.519
1.659
N
1
A
A
O3'
C3'
DC
DC
1005
1005
-0.052
0.006
1.419
1.367
N
1
A
A
O3'
P
DC
DG
1005
1006
0.130
0.012
1.607
1.737
Y
1
A
A
P
O5'
DG
DG
1006
1006
0.067
0.010
1.593
1.660
N
1
A
A
C2'
C1'
DG
DG
1006
1006
0.128
0.010
1.519
1.647
N
1
A
A
O3'
C3'
DG
DG
1006
1006
-0.056
0.006
1.419
1.363
N
28
0.2910000
0.2150000
0.2190000
0.2190000
1.8
40
143
1931
1931
Random
1
isotropic
Rfree
0.0
0.0
ISOMORPHOUS
NDB entry DD0015
SHELX 2000 DNA dictioary
1.8
40
20
192
52
120
0
1.8
40
1KCI
1951
1951
0.0
0.0
0.0940000
1
21.5
7.7
99.8
1.80
1.86
5.0
195
0.3500000
6.6
100
refinement
SHELXL-97
data reduction
DENZO
data scaling
SCALEPACK
Crystal Structure of 9-amino-N-[2-(4-morpholinyl)ethyl]-4-acridinecarboxamide Bound to d(CGTACG)2
1
N
N
2
N
N
2
N
N
3
N
N
hydrog
WATSON-CRICK
A
DC
1001
A
N3
DC
1
1_555
A
DG
1006
A
N1
DG
6
4_655
hydrog
WATSON-CRICK
A
DC
1001
A
N4
DC
1
1_555
A
DG
1006
A
O6
DG
6
4_655
hydrog
WATSON-CRICK
A
DC
1001
A
O2
DC
1
1_555
A
DG
1006
A
N2
DG
6
4_655
hydrog
WATSON-CRICK
A
DG
1002
A
N1
DG
2
1_555
A
DC
1005
A
N3
DC
5
4_655
hydrog
WATSON-CRICK
A
DG
1002
A
N2
DG
2
1_555
A
DC
1005
A
O2
DC
5
4_655
hydrog
WATSON-CRICK
A
DG
1002
A
O6
DG
2
1_555
A
DC
1005
A
N4
DC
5
4_655
hydrog
WATSON-CRICK
A
DT
1003
A
N3
DT
3
1_555
A
DA
1004
A
N1
DA
4
4_655
hydrog
WATSON-CRICK
A
DT
1003
A
O4
DT
3
1_555
A
DA
1004
A
N6
DA
4
4_655
hydrog
WATSON-CRICK
A
DA
1004
A
N1
DA
4
1_555
A
DT
1003
A
N3
DT
3
4_655
hydrog
WATSON-CRICK
A
DA
1004
A
N6
DA
4
1_555
A
DT
1003
A
O4
DT
3
4_655
hydrog
WATSON-CRICK
A
DC
1005
A
N3
DC
5
1_555
A
DG
1002
A
N1
DG
2
4_655
hydrog
WATSON-CRICK
A
DC
1005
A
N4
DC
5
1_555
A
DG
1002
A
O6
DG
2
4_655
hydrog
WATSON-CRICK
A
DC
1005
A
O2
DC
5
1_555
A
DG
1002
A
N2
DG
2
4_655
hydrog
WATSON-CRICK
A
DG
1006
A
N1
DG
6
1_555
A
DC
1001
A
N3
DC
1
4_655
hydrog
WATSON-CRICK
A
DG
1006
A
N2
DG
6
1_555
A
DC
1001
A
O2
DC
1
4_655
hydrog
WATSON-CRICK
A
DG
1006
A
O6
DG
6
1_555
A
DC
1001
A
N4
DC
1
4_655
DNA
DNA, intercalator, aminoacridinecarboxamide
1KCI
PDB
1
1KCI
1001
1006
1KCI
1001
1006
1KCI
A
1
1
6
BINDING SITE FOR RESIDUE DRC A 3014
A
DRC
3014
Software
11
BINDING SITE FOR RESIDUE DRC A 3015
A
DRC
3015
Software
6
A
DC
1001
A
DC
1
11
1_555
A
DG
1002
A
DG
2
11
1_555
A
DG
1002
A
DG
2
11
3_664
A
DT
1003
A
DT
3
11
1_555
A
DA
1004
A
DA
4
11
2_655
A
DC
1005
A
DC
5
11
4_655
A
DG
1006
A
DG
6
11
4_655
A
DRC
3015
C
DRC
11
4_655
A
HOH
4016
D
HOH
11
2_655
A
HOH
4019
D
HOH
11
4_655
A
HOH
4019
D
HOH
11
1_555
A
DC
1001
A
DC
1
6
4_655
A
DC
1001
A
DC
1
6
1_445
A
DG
1006
A
DG
6
6
4_545
A
DG
1006
A
DG
6
6
1_555
A
DRC
3014
B
DRC
6
4_655
A
HOH
4011
D
HOH
6
1_555
172
P 64