0.014342
0.000000
0.000000
0.000000
0.013758
0.000000
0.000000
0.000000
0.011835
0.00000
0.00000
0.00000
Nair, D.T.
Singh, K.
Sahu, N.
Rao, K.V.S.
Salunke, D.M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
69.724
72.686
84.493
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
J.Immunol.
JOIMA3
0952
0022-1767
165
6949
6955
11120821
Crystal structure of an antibody bound to an immunodominant peptide epitope: novel features in peptide-antibody recognition.
2000
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
300
1
IMAGE PLATE
MARRESEARCH
GRAPHITE
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU
23279.693
PC283 IMMUNOGLOBULIN
light chain
1
nat
polymer
22981.807
PC283 IMMUNOGLOBULIN
heavy chain
1
nat
polymer
1584.622
PS1 peptide
1
syn
polymer
18.015
water
31
nat
water
no
no
DIVLTQSPKSMSMSVGERVTLSCKASENVGTYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFTGSGSATDFTLKISSVQA
EDLADYHCGQTYSYPTFGGGTKLAIKRADAAPTVSIFPPSSEQLTAGGASVVCFLNNFYPKDINVKWKIDGSERQNGVAN
SWTAQDSADSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
DIVLTQSPKSMSMSVGERVTLSCKASENVGTYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFTGSGSATDFTLKISSVQA
EDLADYHCGQTYSYPTFGGGTKLAIKRADAAPTVSIFPPSSEQLTAGGASVVCFLNNFYPKDINVKWKIDGSERQNGVAN
SWTAQDSADSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
L
polypeptide(L)
no
no
QVALQESGPGLVKPSQSLSLTCTVTGYSITSDYAWNWIRQFPGNKLEWMGYIRNGGSTTYNPSLASRISITRDTSKNQFF
LQLNSVTTEDTATYYCARGGTGFTYWGAGTLVTVSAAATTPPSVYPLAPGSAAAAAAMVTLGCLVKGYFPEPVTVTWNSG
SLSSGVHTFPAVLQSALYTLSSSVTVPSSPRPSATVTCNVAHPASSTKVDKKIVPRDC
QVALQESGPGLVKPSQSLSLTCTVTGYSITSDYAWNWIRQFPGNKLEWMGYIRNGGSTTYNPSLASRISITRDTSKNQFF
LQLNSVTTEDTATYYCARGGTGFTYWGAGTLVTVSAAATTPPSVYPLAPGSAAAAAAMVTLGCLVKGYFPEPVTVTWNSG
SLSSGVHTFPAVLQSALYTLSSSVTVPSSPRPSATVTCNVAHPASSTKVDKKIVPRDC
H
polypeptide(L)
no
no
HQLDPAFGANSTNPD
HQLDPAFGANSTNPD
P
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
house mouse
Mus
sample
10090
Mus musculus
house mouse
Mus
sample
10090
Mus musculus
1
2.24
44.99
VAPOR DIFFUSION, HANGING DROP
7.2
18% PEG 3K, pH 7.2, VAPOR DIFFUSION, HANGING DROP, temperature 300K
300
repository
Initial release
Version format compliance
Version format compliance
1
0
2002-05-11
1
1
2008-04-27
1
2
2011-07-13
CRYSTAL STRUCTURE OF ANTIBODY PC287 IN COMPLEX WITH PS1 PEPTIDE
CRYSTAL STRUCTURE OF ANTIBODY PC282 IN COMPLEX WITH PS1 PEPTIDE
CRYSTAL STRUCTURE OF ANTIBODY PC287
CRYSTAL STRUCTURE OF ANTIBODY PC282
SEQUENCE
An appropriate sequence database match for the
Immunoglobulin was not available at the time of
processing.
RCSB
Y
RCSB
2001-11-11
REL
HOH
water
The peptide was chemically synthesized. The sequence of the peptide is naturally found in Hepatitis B virus.
sample
WAT
4
4
HOH
HOH
214
L
WAT
5
4
HOH
HOH
215
L
WAT
6
4
HOH
HOH
216
L
WAT
10
4
HOH
HOH
217
L
WAT
11
4
HOH
HOH
218
L
WAT
14
4
HOH
HOH
219
L
WAT
18
4
HOH
HOH
220
L
WAT
19
4
HOH
HOH
221
L
WAT
20
4
HOH
HOH
222
L
WAT
21
4
HOH
HOH
223
L
WAT
22
4
HOH
HOH
224
L
WAT
23
4
HOH
HOH
225
L
WAT
24
4
HOH
HOH
226
L
WAT
27
4
HOH
HOH
227
L
WAT
30
4
HOH
HOH
228
L
WAT
31
4
HOH
HOH
229
L
WAT
1
4
HOH
HOH
219
H
WAT
2
4
HOH
HOH
220
H
WAT
3
4
HOH
HOH
221
H
WAT
7
4
HOH
HOH
222
H
WAT
8
4
HOH
HOH
223
H
WAT
9
4
HOH
HOH
224
H
WAT
12
4
HOH
HOH
225
H
WAT
13
4
HOH
HOH
226
H
WAT
15
4
HOH
HOH
227
H
WAT
16
4
HOH
HOH
228
H
WAT
17
4
HOH
HOH
229
H
WAT
25
4
HOH
HOH
230
H
WAT
26
4
HOH
HOH
231
H
WAT
28
4
HOH
HOH
232
H
WAT
29
4
HOH
HOH
233
H
ASP
1
n
1
ASP
1
L
ILE
2
n
2
ILE
2
L
VAL
3
n
3
VAL
3
L
LEU
4
n
4
LEU
4
L
THR
5
n
5
THR
5
L
GLN
6
n
6
GLN
6
L
SER
7
n
7
SER
7
L
PRO
8
n
8
PRO
8
L
LYS
9
n
9
LYS
9
L
SER
10
n
10
SER
10
L
MET
11
n
11
MET
11
L
SER
12
n
12
SER
12
L
MET
13
n
13
MET
13
L
SER
14
n
14
SER
14
L
VAL
15
n
15
VAL
15
L
GLY
16
n
16
GLY
16
L
GLU
17
n
17
GLU
17
L
ARG
18
n
18
ARG
18
L
VAL
19
n
19
VAL
19
L
THR
20
n
20
THR
20
L
LEU
21
n
21
LEU
21
L
SER
22
n
22
SER
22
L
CYS
23
n
23
CYS
23
L
LYS
24
n
24
LYS
24
L
ALA
25
n
25
ALA
25
L
SER
26
n
26
SER
26
L
GLU
27
n
27
GLU
27
L
ASN
28
n
28
ASN
28
L
VAL
29
n
29
VAL
29
L
GLY
30
n
30
GLY
30
L
THR
31
n
31
THR
31
L
TYR
32
n
32
TYR
32
L
VAL
33
n
33
VAL
33
L
SER
34
n
34
SER
34
L
TRP
35
n
35
TRP
35
L
TYR
36
n
36
TYR
36
L
GLN
37
n
37
GLN
37
L
GLN
38
n
38
GLN
38
L
LYS
39
n
39
LYS
39
L
PRO
40
n
40
PRO
40
L
GLU
41
n
41
GLU
41
L
GLN
42
n
42
GLN
42
L
SER
43
n
43
SER
43
L
PRO
44
n
44
PRO
44
L
LYS
45
n
45
LYS
45
L
LEU
46
n
46
LEU
46
L
LEU
47
n
47
LEU
47
L
ILE
48
n
48
ILE
48
L
TYR
49
n
49
TYR
49
L
GLY
50
n
50
GLY
50
L
ALA
51
n
51
ALA
51
L
SER
52
n
52
SER
52
L
ASN
53
n
53
ASN
53
L
ARG
54
n
54
ARG
54
L
TYR
55
n
55
TYR
55
L
THR
56
n
56
THR
56
L
GLY
57
n
57
GLY
57
L
VAL
58
n
58
VAL
58
L
PRO
59
n
59
PRO
59
L
ASP
60
n
60
ASP
60
L
ARG
61
n
61
ARG
61
L
PHE
62
n
62
PHE
62
L
THR
63
n
63
THR
63
L
GLY
64
n
64
GLY
64
L
SER
65
n
65
SER
65
L
GLY
66
n
66
GLY
66
L
SER
67
n
67
SER
67
L
ALA
68
n
68
ALA
68
L
THR
69
n
69
THR
69
L
ASP
70
n
70
ASP
70
L
PHE
71
n
71
PHE
71
L
THR
72
n
72
THR
72
L
LEU
73
n
73
LEU
73
L
LYS
74
n
74
LYS
74
L
ILE
75
n
75
ILE
75
L
SER
76
n
76
SER
76
L
SER
77
n
77
SER
77
L
VAL
78
n
78
VAL
78
L
GLN
79
n
79
GLN
79
L
ALA
80
n
80
ALA
80
L
GLU
81
n
81
GLU
81
L
ASP
82
n
82
ASP
82
L
LEU
83
n
83
LEU
83
L
ALA
84
n
84
ALA
84
L
ASP
85
n
85
ASP
85
L
TYR
86
n
86
TYR
86
L
HIS
87
n
87
HIS
87
L
CYS
88
n
88
CYS
88
L
GLY
89
n
89
GLY
89
L
GLN
90
n
90
GLN
90
L
THR
91
n
91
THR
91
L
TYR
92
n
92
TYR
92
L
SER
93
n
93
SER
93
L
TYR
94
n
94
TYR
94
L
PRO
95
n
95
PRO
95
L
THR
96
n
96
THR
96
L
PHE
97
n
97
PHE
97
L
GLY
98
n
98
GLY
98
L
GLY
99
n
99
GLY
99
L
GLY
100
n
100
GLY
100
L
THR
101
n
101
THR
101
L
LYS
102
n
102
LYS
102
L
LEU
103
n
103
LEU
103
L
ALA
104
n
104
ALA
104
L
ILE
105
n
105
ILE
105
L
LYS
106
n
106
LYS
106
L
ARG
107
n
107
ARG
107
L
ALA
108
n
108
ALA
108
L
ASP
109
n
109
ASP
109
L
ALA
110
n
110
ALA
110
L
ALA
111
n
111
ALA
111
L
PRO
112
n
112
PRO
112
L
THR
113
n
113
THR
113
L
VAL
114
n
114
VAL
114
L
SER
115
n
115
SER
115
L
ILE
116
n
116
ILE
116
L
PHE
117
n
117
PHE
117
L
PRO
118
n
118
PRO
118
L
PRO
119
n
119
PRO
119
L
SER
120
n
120
SER
120
L
SER
121
n
121
SER
121
L
GLU
122
n
122
GLU
122
L
GLN
123
n
123
GLN
123
L
LEU
124
n
124
LEU
124
L
THR
125
n
125
THR
125
L
ALA
126
n
126
ALA
126
L
GLY
127
n
127
GLY
127
L
GLY
128
n
128
GLY
128
L
ALA
129
n
129
ALA
129
L
SER
130
n
130
SER
130
L
VAL
131
n
131
VAL
131
L
VAL
132
n
132
VAL
132
L
CYS
133
n
133
CYS
133
L
PHE
134
n
134
PHE
134
L
LEU
135
n
135
LEU
135
L
ASN
136
n
136
ASN
136
L
ASN
137
n
137
ASN
137
L
PHE
138
n
138
PHE
138
L
TYR
139
n
139
TYR
139
L
PRO
140
n
140
PRO
140
L
LYS
141
n
141
LYS
141
L
ASP
142
n
142
ASP
142
L
ILE
143
n
143
ILE
143
L
ASN
144
n
144
ASN
144
L
VAL
145
n
145
VAL
145
L
LYS
146
n
146
LYS
146
L
TRP
147
n
147
TRP
147
L
LYS
148
n
148
LYS
148
L
ILE
149
n
149
ILE
149
L
ASP
150
n
150
ASP
150
L
GLY
151
n
151
GLY
151
L
SER
152
n
152
SER
152
L
GLU
153
n
153
GLU
153
L
ARG
154
n
154
ARG
154
L
GLN
155
n
155
GLN
155
L
ASN
156
n
156
ASN
156
L
GLY
157
n
157
GLY
157
L
VAL
158
n
158
VAL
158
L
ALA
159
n
159
ALA
159
L
ASN
160
n
160
ASN
160
L
SER
161
n
161
SER
161
L
TRP
162
n
162
TRP
162
L
THR
163
n
163
THR
163
L
ALA
164
n
164
ALA
164
L
GLN
165
n
165
GLN
165
L
ASP
166
n
166
ASP
166
L
SER
167
n
167
SER
167
L
ALA
168
n
168
ALA
168
L
ASP
169
n
169
ASP
169
L
SER
170
n
170
SER
170
L
THR
171
n
171
THR
171
L
TYR
172
n
172
TYR
172
L
SER
173
n
173
SER
173
L
MET
174
n
174
MET
174
L
SER
175
n
175
SER
175
L
SER
176
n
176
SER
176
L
THR
177
n
177
THR
177
L
LEU
178
n
178
LEU
178
L
THR
179
n
179
THR
179
L
LEU
180
n
180
LEU
180
L
THR
181
n
181
THR
181
L
LYS
182
n
182
LYS
182
L
ASP
183
n
183
ASP
183
L
GLU
184
n
184
GLU
184
L
TYR
185
n
185
TYR
185
L
GLU
186
n
186
GLU
186
L
ARG
187
n
187
ARG
187
L
HIS
188
n
188
HIS
188
L
ASN
189
n
189
ASN
189
L
SER
190
n
190
SER
190
L
TYR
191
n
191
TYR
191
L
THR
192
n
192
THR
192
L
CYS
193
n
193
CYS
193
L
GLU
194
n
194
GLU
194
L
ALA
195
n
195
ALA
195
L
THR
196
n
196
THR
196
L
HIS
197
n
197
HIS
197
L
LYS
198
n
198
LYS
198
L
THR
199
n
199
THR
199
L
SER
200
n
200
SER
200
L
THR
201
n
201
THR
201
L
SER
202
n
202
SER
202
L
PRO
203
n
203
PRO
203
L
ILE
204
n
204
ILE
204
L
VAL
205
n
205
VAL
205
L
LYS
206
n
206
LYS
206
L
SER
207
n
207
SER
207
L
PHE
208
n
208
PHE
208
L
ASN
209
n
209
ASN
209
L
ARG
210
n
210
ARG
210
L
ASN
211
n
211
ASN
211
L
GLU
212
n
212
GLU
212
L
CYS
213
n
213
CYS
213
L
GLN
1
n
1
GLN
1
H
VAL
2
n
2
VAL
2
H
ALA
3
n
3
ALA
3
H
LEU
4
n
4
LEU
4
H
GLN
5
n
5
GLN
5
H
GLU
6
n
6
GLU
6
H
SER
7
n
7
SER
7
H
GLY
8
n
8
GLY
8
H
PRO
9
n
9
PRO
9
H
GLY
10
n
10
GLY
10
H
LEU
11
n
11
LEU
11
H
VAL
12
n
12
VAL
12
H
LYS
13
n
13
LYS
13
H
PRO
14
n
14
PRO
14
H
SER
15
n
15
SER
15
H
GLN
16
n
16
GLN
16
H
SER
17
n
17
SER
17
H
LEU
18
n
18
LEU
18
H
SER
19
n
19
SER
19
H
LEU
20
n
20
LEU
20
H
THR
21
n
21
THR
21
H
CYS
22
n
22
CYS
22
H
THR
23
n
23
THR
23
H
VAL
24
n
24
VAL
24
H
THR
25
n
25
THR
25
H
GLY
26
n
26
GLY
26
H
TYR
27
n
27
TYR
27
H
SER
28
n
28
SER
28
H
ILE
29
n
29
ILE
29
H
THR
30
n
30
THR
30
H
SER
31
n
31
SER
31
H
ASP
32
n
32
ASP
32
H
TYR
33
n
33
TYR
33
H
ALA
34
n
34
ALA
34
H
TRP
35
n
35
TRP
35
H
ASN
36
n
36
ASN
36
H
TRP
37
n
37
TRP
37
H
ILE
38
n
38
ILE
38
H
ARG
39
n
39
ARG
39
H
GLN
40
n
40
GLN
40
H
PHE
41
n
41
PHE
41
H
PRO
42
n
42
PRO
42
H
GLY
43
n
43
GLY
43
H
ASN
44
n
44
ASN
44
H
LYS
45
n
45
LYS
45
H
LEU
46
n
46
LEU
46
H
GLU
47
n
47
GLU
47
H
TRP
48
n
48
TRP
48
H
MET
49
n
49
MET
49
H
GLY
50
n
50
GLY
50
H
TYR
51
n
51
TYR
51
H
ILE
52
n
52
ILE
52
H
ARG
53
n
53
ARG
53
H
ASN
54
n
54
ASN
54
H
GLY
55
n
55
GLY
55
H
GLY
56
n
56
GLY
56
H
SER
57
n
57
SER
57
H
THR
58
n
58
THR
58
H
THR
59
n
59
THR
59
H
TYR
60
n
60
TYR
60
H
ASN
61
n
61
ASN
61
H
PRO
62
n
62
PRO
62
H
SER
63
n
63
SER
63
H
LEU
64
n
64
LEU
64
H
ALA
65
n
65
ALA
65
H
SER
66
n
66
SER
66
H
ARG
67
n
67
ARG
67
H
ILE
68
n
68
ILE
68
H
SER
69
n
69
SER
69
H
ILE
70
n
70
ILE
70
H
THR
71
n
71
THR
71
H
ARG
72
n
72
ARG
72
H
ASP
73
n
73
ASP
73
H
THR
74
n
74
THR
74
H
SER
75
n
75
SER
75
H
LYS
76
n
76
LYS
76
H
ASN
77
n
77
ASN
77
H
GLN
78
n
78
GLN
78
H
PHE
79
n
79
PHE
79
H
PHE
80
n
80
PHE
80
H
LEU
81
n
81
LEU
81
H
GLN
82
n
82
GLN
82
H
LEU
83
n
83
LEU
83
H
ASN
84
n
84
ASN
84
H
SER
85
n
85
SER
85
H
VAL
86
n
86
VAL
86
H
THR
87
n
87
THR
87
H
THR
88
n
88
THR
88
H
GLU
89
n
89
GLU
89
H
ASP
90
n
90
ASP
90
H
THR
91
n
91
THR
91
H
ALA
92
n
92
ALA
92
H
THR
93
n
93
THR
93
H
TYR
94
n
94
TYR
94
H
TYR
95
n
95
TYR
95
H
CYS
96
n
96
CYS
96
H
ALA
97
n
97
ALA
97
H
ARG
98
n
98
ARG
98
H
GLY
99
n
99
GLY
99
H
GLY
100
n
100
GLY
100
H
THR
101
n
101
THR
101
H
GLY
102
n
102
GLY
102
H
PHE
103
n
103
PHE
103
H
THR
104
n
104
THR
104
H
TYR
105
n
105
TYR
105
H
TRP
106
n
106
TRP
106
H
GLY
107
n
107
GLY
107
H
ALA
108
n
108
ALA
108
H
GLY
109
n
109
GLY
109
H
THR
110
n
110
THR
110
H
LEU
111
n
111
LEU
111
H
VAL
112
n
112
VAL
112
H
THR
113
n
113
THR
113
H
VAL
114
n
114
VAL
114
H
SER
115
n
115
SER
115
H
ALA
116
n
116
ALA
116
H
ALA
117
n
117
ALA
117
H
ALA
118
n
118
ALA
118
H
THR
119
n
119
THR
119
H
THR
120
n
120
THR
120
H
PRO
121
n
121
PRO
121
H
PRO
122
n
122
PRO
122
H
SER
123
n
123
SER
123
H
VAL
124
n
124
VAL
124
H
TYR
125
n
125
TYR
125
H
PRO
126
n
126
PRO
126
H
LEU
127
n
127
LEU
127
H
ALA
128
n
128
ALA
128
H
PRO
129
n
129
PRO
129
H
GLY
130
n
130
GLY
130
H
SER
131
n
131
SER
131
H
ALA
132
n
132
ALA
132
H
ALA
133
n
133
ALA
133
H
ALA
134
n
134
ALA
134
H
ALA
135
n
135
ALA
135
H
ALA
136
n
136
ALA
136
H
ALA
137
n
137
ALA
137
H
MET
138
n
138
MET
138
H
VAL
139
n
139
VAL
139
H
THR
140
n
140
THR
140
H
LEU
141
n
141
LEU
141
H
GLY
142
n
142
GLY
142
H
CYS
143
n
143
CYS
143
H
LEU
144
n
144
LEU
144
H
VAL
145
n
145
VAL
145
H
LYS
146
n
146
LYS
146
H
GLY
147
n
147
GLY
147
H
TYR
148
n
148
TYR
148
H
PHE
149
n
149
PHE
149
H
PRO
150
n
150
PRO
150
H
GLU
151
n
151
GLU
151
H
PRO
152
n
152
PRO
152
H
VAL
153
n
153
VAL
153
H
THR
154
n
154
THR
154
H
VAL
155
n
155
VAL
155
H
THR
156
n
156
THR
156
H
TRP
157
n
157
TRP
157
H
ASN
158
n
158
ASN
158
H
SER
159
n
159
SER
159
H
GLY
160
n
160
GLY
160
H
SER
161
n
161
SER
161
H
LEU
162
n
162
LEU
162
H
SER
163
n
163
SER
163
H
SER
164
n
164
SER
164
H
GLY
165
n
165
GLY
165
H
VAL
166
n
166
VAL
166
H
HIS
167
n
167
HIS
167
H
THR
168
n
168
THR
168
H
PHE
169
n
169
PHE
169
H
PRO
170
n
170
PRO
170
H
ALA
171
n
171
ALA
171
H
VAL
172
n
172
VAL
172
H
LEU
173
n
173
LEU
173
H
GLN
174
n
174
GLN
174
H
SER
175
n
175
SER
175
H
ALA
176
n
176
ALA
176
H
LEU
177
n
177
LEU
177
H
TYR
178
n
178
TYR
178
H
THR
179
n
179
THR
179
H
LEU
180
n
180
LEU
180
H
SER
181
n
181
SER
181
H
SER
182
n
182
SER
182
H
SER
183
n
183
SER
183
H
VAL
184
n
184
VAL
184
H
THR
185
n
185
THR
185
H
VAL
186
n
186
VAL
186
H
PRO
187
n
187
PRO
187
H
SER
188
n
188
SER
188
H
SER
189
n
189
SER
189
H
PRO
190
n
190
PRO
190
H
ARG
191
n
191
ARG
191
H
PRO
192
n
192
PRO
192
H
SER
193
n
193
SER
193
H
ALA
194
n
194
ALA
194
H
THR
195
n
195
THR
195
H
VAL
196
n
196
VAL
196
H
THR
197
n
197
THR
197
H
CYS
198
n
198
CYS
198
H
ASN
199
n
199
ASN
199
H
VAL
200
n
200
VAL
200
H
ALA
201
n
201
ALA
201
H
HIS
202
n
202
HIS
202
H
PRO
203
n
203
PRO
203
H
ALA
204
n
204
ALA
204
H
SER
205
n
205
SER
205
H
SER
206
n
206
SER
206
H
THR
207
n
207
THR
207
H
LYS
208
n
208
LYS
208
H
VAL
209
n
209
VAL
209
H
ASP
210
n
210
ASP
210
H
LYS
211
n
211
LYS
211
H
LYS
212
n
212
LYS
212
H
ILE
213
n
213
ILE
213
H
VAL
214
n
214
VAL
214
H
PRO
215
n
215
PRO
215
H
ARG
216
n
216
ARG
216
H
ASP
217
n
217
ASP
217
H
CYS
218
n
218
CYS
218
H
HIS
1
n
1
HIS
1
P
GLN
2
n
2
GLN
2
P
LEU
3
n
3
LEU
3
P
ASP
4
n
4
ASP
4
P
PRO
5
n
5
PRO
5
P
ALA
6
n
6
ALA
6
P
PHE
7
n
7
PHE
7
P
GLY
8
n
8
GLY
8
P
ALA
9
n
9
ALA
9
P
ASN
10
n
10
ASN
10
P
SER
11
n
11
SER
11
P
THR
12
n
12
THR
12
P
ASN
13
n
13
ASN
13
P
PRO
14
n
14
PRO
14
P
ASP
15
n
15
ASP
15
P
author_and_software_defined_assembly
PISA
3
trimeric
4840
-32
19580
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
L
N
THR
5
A
N
THR
5
L
O
LYS
24
A
O
LYS
24
L
N
CYS
23
A
N
CYS
23
L
O
PHE
71
A
O
PHE
71
L
N
LYS
74
A
N
LYS
74
L
O
THR
63
A
O
THR
63
L
N
MET
11
A
N
MET
11
L
O
LYS
102
A
O
LYS
102
L
N
LEU
103
A
N
LEU
103
L
O
ALA
84
A
O
ALA
84
L
N
GLN
90
A
N
GLN
90
L
O
THR
96
A
O
THR
96
L
O
THR
96
A
O
THR
96
L
N
GLN
90
A
N
GLN
90
L
O
GLY
89
A
O
GLY
89
L
N
SER
34
A
N
SER
34
L
N
GLN
37
A
N
GLN
37
L
O
LYS
45
A
O
LYS
45
L
N
TYR
49
A
N
TYR
49
L
O
ASN
53
A
O
ASN
53
L
N
PHE
117
A
N
PHE
117
L
O
VAL
132
A
O
VAL
132
L
O
PHE
138
A
O
PHE
138
L
N
TYR
172
A
N
TYR
172
L
O
THR
177
A
O
THR
177
L
N
ALA
159
A
N
ALA
159
L
O
SER
152
A
O
SER
152
L
N
ILE
149
A
N
ILE
149
L
N
LYS
148
A
N
LYS
148
L
O
THR
192
A
O
THR
192
L
O
ALA
195
A
O
ALA
195
L
N
ILE
204
A
N
ILE
204
H
O
SER
7
B
O
SER
7
H
N
THR
21
B
N
THR
21
H
N
CYS
22
B
N
CYS
22
H
O
PHE
79
B
O
PHE
79
H
O
GLN
82
B
O
GLN
82
H
N
SER
69
B
N
SER
69
H
N
VAL
12
B
N
VAL
12
H
O
THR
113
B
O
THR
113
H
N
VAL
112
B
N
VAL
112
H
O
ALA
92
B
O
ALA
92
H
O
ARG
98
B
O
ARG
98
H
N
THR
104
B
N
THR
104
H
O
TYR
105
B
O
TYR
105
H
N
ARG
98
B
N
ARG
98
H
N
GLY
99
B
N
GLY
99
H
O
ALA
34
B
O
ALA
34
H
N
ARG
39
B
N
ARG
39
H
O
GLU
47
B
O
GLU
47
H
O
TYR
51
B
O
TYR
51
H
N
THR
59
B
N
THR
59
H
N
LEU
127
B
N
LEU
127
H
O
GLY
142
B
O
GLY
142
H
O
TYR
148
B
O
TYR
148
H
N
TYR
178
B
N
TYR
178
H
O
SER
183
B
O
SER
183
H
N
HIS
167
B
N
HIS
167
H
O
THR
156
B
O
THR
156
H
N
ASN
199
B
N
ASN
199
H
N
HIS
202
B
N
HIS
202
H
O
THR
207
B
O
THR
207
1
-11.18
1.60
122.70
111.52
H
H
H
O
C
N
LYS
LYS
LEU
45
45
46
Y
1
L
L
C
OXT
CYS
CYS
213
213
17.951
0.019
1.229
19.180
N
1
L
ILE
2
22.14
94.35
1
L
SER
7
-86.49
-91.51
1
L
PRO
8
-53.42
98.69
1
L
THR
20
-164.08
105.23
1
L
ASN
28
-26.73
110.87
1
L
TYR
32
-97.66
48.38
1
L
LEU
47
-120.51
-51.30
1
L
ALA
51
60.59
-25.89
1
L
TYR
55
-96.24
-158.61
1
L
ARG
61
-57.93
-0.95
1
L
ALA
68
25.83
93.23
1
L
THR
69
96.78
-63.32
1
L
ASP
82
-81.65
34.18
1
L
ALA
84
171.76
175.99
1
L
TYR
92
-100.41
-77.65
1
L
SER
93
-80.87
-118.48
1
L
ALA
129
-175.79
111.86
1
L
GLN
165
-54.42
-162.43
1
L
ASP
166
63.03
-119.00
1
L
SER
167
80.12
35.42
1
L
ALA
168
69.25
-4.31
1
L
ASN
189
-109.20
-80.95
1
L
THR
199
-98.15
44.41
1
L
SER
200
-172.93
106.00
1
L
ARG
210
-56.33
-2.22
1
L
GLU
212
-156.52
59.00
1
H
SER
15
72.35
-8.87
1
H
TYR
27
164.50
121.42
1
H
ASP
32
65.73
148.27
1
H
TYR
33
94.49
149.41
1
H
LYS
45
179.36
113.76
1
H
PRO
62
-45.87
-12.83
1
H
ALA
92
-175.87
-175.17
1
H
ALA
117
-60.69
-177.06
1
H
SER
131
178.25
84.53
1
H
ALA
132
60.55
-149.18
1
H
ALA
133
-94.67
58.05
1
H
ALA
134
85.18
-164.57
1
H
ALA
135
-106.20
-84.12
1
H
ALA
136
-103.72
-143.14
1
H
PRO
150
-113.46
-166.72
1
H
SER
175
86.40
-86.81
1
H
PRO
190
-93.54
32.92
1
H
ARG
191
-90.71
-64.29
1
H
HIS
202
-115.55
76.77
1
H
PRO
203
-29.60
-67.03
1
H
ASP
217
-37.64
135.97
1
P
GLN
2
63.70
-15.29
1
P
LEU
3
94.66
36.41
1
P
PHE
7
-95.14
-78.90
1
P
ALA
9
-23.58
86.90
1
P
ASN
10
-142.37
-109.99
1
P
THR
12
178.46
121.86
1
P
PRO
14
-56.40
-164.62
PROTEIN_REP.PARAM
PROTEIN.TOP
WATER_REP.PARAM
WATER_REP.TOP
24.5
0.24
0.00
0.00
-0.81
0.00
0.56
0.277
0.007
0.184
2.90
50.0
785
7953
7953
10.6
82.4
RANDOM
146232.66
0.000000
1
OVERALL
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
ENGH & HUBER
FLAT MODEL
19.185
0.219768
0.34
0.34
5.00
0.46
0.46
2.90
50.0
31
3394
0
0
3363
0.306
1.6
27.2
1.21
0.326
0.034
0.305
3.08
93
731
6
11.3
51.0
37.5
2.90
50
1KCR
9651
7953
0.124
1
5.1
1.4
82
data collection
MAR
data scaling
SCALEPACK
phasing
AMoRE
refinement
CNS
0.5
data reduction
MAR
PC283 Immunoglobulin (light and heavy chain), PS1 peptide
CRYSTAL STRUCTURE OF ANTIBODY PC283 IN COMPLEX WITH PS1 PEPTIDE
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
L
SER
120
A
SER
120
HELX_P
L
ALA
126
A
ALA
126
1
1
7
L
LYS
182
A
LYS
182
HELX_P
L
GLU
186
A
GLU
186
1
2
5
H
THR
87
B
THR
87
HELX_P
H
THR
91
B
THR
91
5
3
5
H
SER
159
B
SER
159
HELX_P
H
SER
161
B
SER
161
5
4
3
H
PRO
203
B
PRO
203
HELX_P
H
SER
206
B
SER
206
5
5
4
disulf
2.638
L
CYS
23
A
SG
CYS
23
1_555
L
CYS
88
A
SG
CYS
88
1_555
disulf
2.458
L
CYS
133
A
SG
CYS
133
1_555
L
CYS
193
A
SG
CYS
193
1_555
disulf
2.638
H
CYS
22
B
SG
CYS
22
1_555
H
CYS
96
B
SG
CYS
96
1_555
disulf
2.607
H
CYS
143
B
SG
CYS
143
1_555
H
CYS
198
B
SG
CYS
198
1_555
IMMUNE SYSTEM
ANTIBODY, PEPTIDE ANTIGEN COMPLEX (ANTIBODY-PEPTIDE), IMMUNE SYSTEM
L
TYR
139
A
TYR
139
1
L
PRO
140
A
PRO
140
-0.08
H
PHE
149
B
PHE
149
1
H
PRO
150
B
PRO
150
0.22
H
GLU
151
B
GLU
151
1
H
PRO
152
B
PRO
152
0.09
KAC_MOUSE
UNP
1
1
P01837
IGH1M_MOUSE
UNP
2
1
P01869
AAK97192
GB
3
17
15419846
1
106
1KCR
108
213
P01837
L
1
108
213
1
102
1KCR
117
218
P01869
H
2
117
218
17
31
1KCR
1
15
15419846
P
3
1
15
4
8
4
4
4
8
4
3
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
L
THR
5
A
THR
5
L
GLN
6
A
GLN
6
L
VAL
19
A
VAL
19
L
LYS
24
A
LYS
24
L
ASP
70
A
ASP
70
L
ILE
75
A
ILE
75
L
PHE
62
A
PHE
62
L
SER
67
A
SER
67
L
SER
10
A
SER
10
L
MET
13
A
MET
13
L
THR
101
A
THR
101
L
ILE
105
A
ILE
105
L
ALA
84
A
ALA
84
L
GLN
90
A
GLN
90
L
THR
96
A
THR
96
L
PHE
97
A
PHE
97
L
ALA
84
A
ALA
84
L
GLN
90
A
GLN
90
L
VAL
33
A
VAL
33
L
GLN
38
A
GLN
38
L
LYS
45
A
LYS
45
L
TYR
49
A
TYR
49
L
ASN
53
A
ASN
53
L
ARG
54
A
ARG
54
L
THR
113
A
THR
113
L
PHE
117
A
PHE
117
L
GLY
128
A
GLY
128
L
PHE
138
A
PHE
138
L
TYR
172
A
TYR
172
L
THR
181
A
THR
181
L
VAL
158
A
VAL
158
L
TRP
162
A
TRP
162
L
SER
152
A
SER
152
L
GLU
153
A
GLU
153
L
ASN
144
A
ASN
144
L
ILE
149
A
ILE
149
L
SER
190
A
SER
190
L
THR
196
A
THR
196
L
ILE
204
A
ILE
204
L
ASN
209
A
ASN
209
H
ALA
3
B
ALA
3
H
SER
7
B
SER
7
H
LEU
18
B
LEU
18
H
THR
25
B
THR
25
H
GLN
78
B
GLN
78
H
LEU
83
B
LEU
83
H
ILE
68
B
ILE
68
H
ASP
73
B
ASP
73
H
LEU
11
B
LEU
11
H
VAL
12
B
VAL
12
H
THR
110
B
THR
110
H
VAL
114
B
VAL
114
H
ALA
92
B
ALA
92
H
GLY
99
B
GLY
99
H
PHE
103
B
PHE
103
H
TRP
106
B
TRP
106
H
ALA
92
B
ALA
92
H
GLY
99
B
GLY
99
H
ALA
34
B
ALA
34
H
GLN
40
B
GLN
40
H
LEU
46
B
LEU
46
H
ILE
52
B
ILE
52
H
THR
58
B
THR
58
H
TYR
60
B
TYR
60
H
SER
123
B
SER
123
H
LEU
127
B
LEU
127
H
MET
138
B
MET
138
H
TYR
148
B
TYR
148
H
TYR
178
B
TYR
178
H
PRO
187
B
PRO
187
H
VAL
166
B
VAL
166
H
LEU
173
B
LEU
173
H
THR
154
B
THR
154
H
TRP
157
B
TRP
157
H
THR
197
B
THR
197
H
HIS
202
B
HIS
202
H
THR
207
B
THR
207
H
LYS
212
B
LYS
212
19
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