0.011529 0.000000 0.000000 0.000000 0.011529 0.000000 0.000000 0.000000 0.012630 0.00000 0.00000 0.00000 Keating, A.E. Malashkevich, V.N. Tidor, B. Kim, P.S. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 24 90.00 90.00 90.00 86.740 86.740 79.176 C2 H4 O 44.053 ACETYL GROUP non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N C N 2 N O N 3 N C N 4 N H N 5 N H N 6 N H N 7 N H N 8 N N N 9 S C N 10 N C N 11 N O N 12 N C N 13 N O N 14 N H N 15 N H N 16 N H N 17 N H N 18 N H N 19 N H N 20 N H N 21 N N N 22 S C N 23 N C N 24 N O N 25 N C N 26 N C N 27 N C N 28 N N N 29 N C N 30 N N N 31 N N N 32 N O N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N N N 49 S C N 50 N C N 51 N O N 52 N C N 53 N C N 54 N O N 55 N N N 56 N O N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N N N 66 R C N 67 N C N 68 N O N 69 N C N 70 N S N 71 N O N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N N N 80 S C N 81 N C N 82 N O N 83 N C N 84 N C N 85 N C N 86 N O N 87 N N N 88 N O N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N N N 100 S C N 101 N C N 102 N O N 103 N C N 104 N C N 105 N C N 106 N O N 107 N O N 108 N O N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N N N 119 S C N 120 N C N 121 N O N 122 N C Y 123 N C Y 124 N N Y 125 N C Y 126 N C Y 127 N N N 128 N O N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N O N 140 N H N 141 N H N 142 N N N 143 S C N 144 N C N 145 N O N 146 N C N 147 N C N 148 N C N 149 N C N 150 N O N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N N N 165 S C N 166 N C N 167 N O N 168 N C N 169 N C N 170 N C N 171 N C N 172 N N N 173 N O N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N N N 190 S C N 191 N C N 192 N O N 193 N C N 194 N O N 195 N O N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N N N 204 S C N 205 N C N 206 N O N 207 N C Y 208 N C Y 209 N C Y 210 N C Y 211 N N Y 212 N C Y 213 N C Y 214 N C Y 215 N C Y 216 N C N 217 N O N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N C N 237 N O N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 1 N doub N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N doub N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N doub N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N doub N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N doub N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N doub N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N doub N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N doub N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N doub N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N doub N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N doub N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N doub N 118 N sing N 119 N sing N 120 N sing N 121 N sing Y 122 N sing Y 123 N doub Y 124 N doub N 125 N sing Y 126 N sing N 127 N sing Y 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N doub N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N doub N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N doub N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N doub N 199 N sing N 200 N sing N 201 N sing N 202 N sing Y 203 N doub Y 204 N sing Y 205 N sing N 206 N sing Y 207 N doub Y 208 N sing Y 209 N sing N 210 N sing Y 211 N sing Y 212 N doub N 213 N sing Y 214 N doub N 215 N sing Y 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N doub N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing US Proc.Natl.Acad.Sci.USA PNASA6 0040 0027-8424 98 14825 14830 10.1073/pnas.261563398 11752430 Side-chain repacking calculations for predicting structures and stabilities of heterodimeric coiled coils. 2001 10.2210/pdb1kd9/pdb pdb_00001kd9 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2000-10-19 ADSC QUANTUM 4 SINGLE WAVELENGTH M x-ray 1 0.9763 1.0 X4A NSLS 0.9763 SYNCHROTRON NSLS BEAMLINE X4A coiled coil acid strand 4156.490 GCN4 ACID BASE HETERODIMER ACID-d12La16L 3 syn polymer coiled coil base strand 4157.150 GCN4 ACID BASE HETERODIMER BASE-d12La16L 3 syn polymer 18.015 water 174 nat water GABH ALL GABH BLL no yes (ACE)EVKQLEAEVEELESELWHLENEVARLEKENAECEA XEVKQLEAEVEELESELWHLENEVARLEKENAECEA A,C,F polypeptide(L) no yes (ACE)KVKQLKAKVEELKSKLWHLKNKVARLKKKNAECKA XKVKQLKAKVEELKSKLWHLKNKVARLKKKNAECKA B,D,E polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n 1 2.982 57.2 VAPOR DIFFUSION, HANGING DROP 7.7 PEG 4000, Na Hepes, 2-propanol, pH 7.7, VAPOR DIFFUSION, HANGING DROP, temperature 293K 293 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_conn repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations Refinement description 1 0 2001-11-28 1 1 2008-04-27 1 2 2011-07-13 1 3 2024-04-03 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_leaving_atom_flag X-ray structure of the coiled coil GABH AIVBLL X-ray structure of the coiled coil GABH ALIBLL RCSB Y RCSB 2001-11-12 REL REL HOH water The peptide was chemically synthesized. sample The peptide was chemically synthesized. sample calculated structure Other in silico model WAT 13 3 HOH HOH 36 A WAT 21 3 HOH HOH 37 A WAT 27 3 HOH HOH 38 A WAT 35 3 HOH HOH 39 A WAT 49 3 HOH HOH 40 A WAT 50 3 HOH HOH 41 A WAT 52 3 HOH HOH 42 A WAT 64 3 HOH HOH 43 A WAT 76 3 HOH HOH 44 A WAT 80 3 HOH HOH 45 A WAT 90 3 HOH HOH 46 A WAT 91 3 HOH HOH 47 A WAT 94 3 HOH HOH 48 A WAT 100 3 HOH HOH 49 A WAT 106 3 HOH HOH 50 A WAT 113 3 HOH HOH 51 A WAT 114 3 HOH HOH 52 A WAT 120 3 HOH HOH 53 A WAT 121 3 HOH HOH 54 A WAT 123 3 HOH HOH 55 A WAT 129 3 HOH HOH 56 A WAT 130 3 HOH HOH 57 A WAT 140 3 HOH HOH 58 A WAT 149 3 HOH HOH 59 A WAT 157 3 HOH HOH 60 A WAT 161 3 HOH HOH 61 A WAT 170 3 HOH HOH 62 A WAT 8 3 HOH HOH 36 B WAT 10 3 HOH HOH 37 B WAT 12 3 HOH HOH 38 B WAT 16 3 HOH HOH 39 B WAT 29 3 HOH HOH 40 B WAT 31 3 HOH HOH 41 B WAT 34 3 HOH HOH 42 B WAT 37 3 HOH HOH 43 B WAT 42 3 HOH HOH 44 B WAT 61 3 HOH HOH 45 B WAT 62 3 HOH HOH 46 B WAT 71 3 HOH HOH 47 B WAT 75 3 HOH HOH 48 B WAT 81 3 HOH HOH 49 B WAT 97 3 HOH HOH 50 B WAT 99 3 HOH HOH 51 B WAT 101 3 HOH HOH 52 B WAT 109 3 HOH HOH 53 B WAT 115 3 HOH HOH 54 B WAT 116 3 HOH HOH 55 B WAT 119 3 HOH HOH 56 B WAT 124 3 HOH HOH 57 B WAT 133 3 HOH HOH 58 B WAT 137 3 HOH HOH 59 B WAT 148 3 HOH HOH 60 B WAT 153 3 HOH HOH 61 B WAT 154 3 HOH HOH 62 B WAT 168 3 HOH HOH 63 B WAT 173 3 HOH HOH 64 B WAT 2 3 HOH HOH 36 C WAT 3 3 HOH HOH 37 C WAT 9 3 HOH HOH 38 C WAT 17 3 HOH HOH 39 C WAT 19 3 HOH HOH 40 C WAT 26 3 HOH HOH 41 C WAT 41 3 HOH HOH 42 C WAT 51 3 HOH HOH 43 C WAT 54 3 HOH HOH 44 C WAT 57 3 HOH HOH 45 C WAT 60 3 HOH HOH 46 C WAT 69 3 HOH HOH 47 C WAT 70 3 HOH HOH 48 C WAT 73 3 HOH HOH 49 C WAT 78 3 HOH HOH 50 C WAT 84 3 HOH HOH 51 C WAT 85 3 HOH HOH 52 C WAT 88 3 HOH HOH 53 C WAT 92 3 HOH HOH 54 C WAT 96 3 HOH HOH 55 C WAT 102 3 HOH HOH 56 C WAT 125 3 HOH HOH 57 C WAT 127 3 HOH HOH 58 C WAT 143 3 HOH HOH 59 C WAT 144 3 HOH HOH 60 C WAT 146 3 HOH HOH 61 C WAT 147 3 HOH HOH 62 C WAT 150 3 HOH HOH 63 C WAT 151 3 HOH HOH 64 C WAT 152 3 HOH HOH 65 C WAT 160 3 HOH HOH 66 C WAT 4 3 HOH HOH 36 D WAT 22 3 HOH HOH 37 D WAT 32 3 HOH HOH 38 D WAT 40 3 HOH HOH 39 D WAT 47 3 HOH HOH 40 D WAT 53 3 HOH HOH 41 D WAT 58 3 HOH HOH 42 D WAT 59 3 HOH HOH 43 D WAT 83 3 HOH HOH 44 D WAT 89 3 HOH HOH 45 D WAT 93 3 HOH HOH 46 D WAT 95 3 HOH HOH 47 D WAT 107 3 HOH HOH 48 D WAT 128 3 HOH HOH 49 D WAT 134 3 HOH HOH 50 D WAT 136 3 HOH HOH 51 D WAT 139 3 HOH HOH 52 D WAT 141 3 HOH HOH 53 D WAT 164 3 HOH HOH 54 D WAT 165 3 HOH HOH 55 D WAT 11 3 HOH HOH 36 E WAT 20 3 HOH HOH 37 E WAT 24 3 HOH HOH 38 E WAT 25 3 HOH HOH 39 E WAT 39 3 HOH HOH 40 E WAT 43 3 HOH HOH 41 E WAT 55 3 HOH HOH 42 E WAT 56 3 HOH HOH 43 E WAT 68 3 HOH HOH 44 E WAT 77 3 HOH HOH 45 E WAT 87 3 HOH HOH 46 E WAT 103 3 HOH HOH 47 E WAT 108 3 HOH HOH 48 E WAT 111 3 HOH HOH 49 E WAT 117 3 HOH HOH 50 E WAT 118 3 HOH HOH 51 E WAT 122 3 HOH HOH 52 E WAT 126 3 HOH HOH 53 E WAT 132 3 HOH HOH 54 E WAT 138 3 HOH HOH 55 E WAT 142 3 HOH HOH 56 E WAT 155 3 HOH HOH 57 E WAT 156 3 HOH HOH 58 E WAT 162 3 HOH HOH 59 E WAT 1 3 HOH HOH 36 F WAT 5 3 HOH HOH 37 F WAT 6 3 HOH HOH 38 F WAT 7 3 HOH HOH 39 F WAT 14 3 HOH HOH 40 F WAT 15 3 HOH HOH 41 F WAT 18 3 HOH HOH 42 F WAT 23 3 HOH HOH 43 F WAT 28 3 HOH HOH 44 F WAT 30 3 HOH HOH 45 F WAT 33 3 HOH HOH 46 F WAT 36 3 HOH HOH 47 F WAT 38 3 HOH HOH 48 F WAT 44 3 HOH HOH 49 F WAT 45 3 HOH HOH 50 F WAT 46 3 HOH HOH 51 F WAT 48 3 HOH HOH 52 F WAT 63 3 HOH HOH 53 F WAT 65 3 HOH HOH 54 F WAT 66 3 HOH HOH 55 F WAT 67 3 HOH HOH 56 F WAT 72 3 HOH HOH 57 F WAT 74 3 HOH HOH 58 F WAT 79 3 HOH HOH 59 F WAT 82 3 HOH HOH 60 F WAT 86 3 HOH HOH 61 F WAT 98 3 HOH HOH 62 F WAT 104 3 HOH HOH 63 F WAT 105 3 HOH HOH 64 F WAT 110 3 HOH HOH 65 F WAT 112 3 HOH HOH 66 F WAT 131 3 HOH HOH 67 F WAT 135 3 HOH HOH 68 F WAT 145 3 HOH HOH 69 F WAT 158 3 HOH HOH 70 F WAT 159 3 HOH HOH 71 F WAT 163 3 HOH HOH 72 F WAT 166 3 HOH HOH 73 F WAT 167 3 HOH HOH 74 F WAT 169 3 HOH HOH 75 F WAT 171 3 HOH HOH 76 F WAT 172 3 HOH HOH 77 F WAT 174 3 HOH HOH 78 F ACE 0 n 1 ACE 0 A GLU 1 n 2 GLU 1 A VAL 2 n 3 VAL 2 A LYS 3 n 4 LYS 3 A ALA 4 n 5 GLN 4 A LEU 5 n 6 LEU 5 A ALA 6 n 7 GLU 6 A ALA 7 n 8 ALA 7 A GLU 8 n 9 GLU 8 A VAL 9 n 10 VAL 9 A GLU 10 n 11 GLU 10 A ALA 11 n 12 GLU 11 A LEU 12 n 13 LEU 12 A GLU 13 n 14 GLU 13 A ALA 14 n 15 SER 14 A GLU 15 n 16 GLU 15 A LEU 16 n 17 LEU 16 A TRP 17 n 18 TRP 17 A HIS 18 n 19 HIS 18 A LEU 19 n 20 LEU 19 A GLU 20 n 21 GLU 20 A ASN 21 n 22 ASN 21 A GLU 22 n 23 GLU 22 A VAL 23 n 24 VAL 23 A ALA 24 n 25 ALA 24 A ALA 25 n 26 ARG 25 A LEU 26 n 27 LEU 26 A GLU 27 n 28 GLU 27 A LYS 28 n 29 LYS 28 A GLU 29 n 30 GLU 29 A ASN 30 n 31 ASN 30 A ALA 31 n 32 ALA 31 A GLU 32 n 33 GLU 32 A CYS 33 n 34 CYS 33 A GLU 34 n 35 GLU 34 A ALA 35 n 36 ALA 35 A n 1 0 B LYS 1 n 2 LYS 1 B VAL 2 n 3 VAL 2 B ALA 3 n 4 LYS 3 B ALA 4 n 5 GLN 4 B LEU 5 n 6 LEU 5 B LYS 6 n 7 LYS 6 B ALA 7 n 8 ALA 7 B LYS 8 n 9 LYS 8 B VAL 9 n 10 VAL 9 B GLU 10 n 11 GLU 10 B GLU 11 n 12 GLU 11 B LEU 12 n 13 LEU 12 B LYS 13 n 14 LYS 13 B ALA 14 n 15 SER 14 B LYS 15 n 16 LYS 15 B LEU 16 n 17 LEU 16 B TRP 17 n 18 TRP 17 B HIS 18 n 19 HIS 18 B LEU 19 n 20 LEU 19 B LYS 20 n 21 LYS 20 B ASN 21 n 22 ASN 21 B LYS 22 n 23 LYS 22 B VAL 23 n 24 VAL 23 B ALA 24 n 25 ALA 24 B ARG 25 n 26 ARG 25 B LEU 26 n 27 LEU 26 B LYS 27 n 28 LYS 27 B LYS 28 n 29 LYS 28 B LYS 29 n 30 LYS 29 B ASN 30 n 31 ASN 30 B ALA 31 n 32 ALA 31 B GLU 32 n 33 GLU 32 B CYS 33 n 34 CYS 33 B ALA 34 n 35 LYS 34 B ALA 35 n 36 ALA 35 B ACE 0 n 1 ACE 0 C GLU 1 n 2 GLU 1 C VAL 2 n 3 VAL 2 C LYS 3 n 4 LYS 3 C GLN 4 n 5 GLN 4 C LEU 5 n 6 LEU 5 C GLU 6 n 7 GLU 6 C ALA 7 n 8 ALA 7 C GLU 8 n 9 GLU 8 C VAL 9 n 10 VAL 9 C GLU 10 n 11 GLU 10 C GLU 11 n 12 GLU 11 C LEU 12 n 13 LEU 12 C GLU 13 n 14 GLU 13 C SER 14 n 15 SER 14 C GLU 15 n 16 GLU 15 C LEU 16 n 17 LEU 16 C TRP 17 n 18 TRP 17 C HIS 18 n 19 HIS 18 C LEU 19 n 20 LEU 19 C GLU 20 n 21 GLU 20 C ASN 21 n 22 ASN 21 C GLU 22 n 23 GLU 22 C VAL 23 n 24 VAL 23 C ALA 24 n 25 ALA 24 C ARG 25 n 26 ARG 25 C LEU 26 n 27 LEU 26 C GLU 27 n 28 GLU 27 C LYS 28 n 29 LYS 28 C GLU 29 n 30 GLU 29 C ASN 30 n 31 ASN 30 C ALA 31 n 32 ALA 31 C GLU 32 n 33 GLU 32 C CYS 33 n 34 CYS 33 C GLU 34 n 35 GLU 34 C ALA 35 n 36 ALA 35 C ACE 0 n 1 ACE 0 D LYS 1 n 2 LYS 1 D VAL 2 n 3 VAL 2 D ALA 3 n 4 LYS 3 D GLN 4 n 5 GLN 4 D LEU 5 n 6 LEU 5 D LYS 6 n 7 LYS 6 D ALA 7 n 8 ALA 7 D LYS 8 n 9 LYS 8 D VAL 9 n 10 VAL 9 D GLU 10 n 11 GLU 10 D GLU 11 n 12 GLU 11 D LEU 12 n 13 LEU 12 D LYS 13 n 14 LYS 13 D SER 14 n 15 SER 14 D LYS 15 n 16 LYS 15 D LEU 16 n 17 LEU 16 D TRP 17 n 18 TRP 17 D HIS 18 n 19 HIS 18 D LEU 19 n 20 LEU 19 D LYS 20 n 21 LYS 20 D ASN 21 n 22 ASN 21 D LYS 22 n 23 LYS 22 D VAL 23 n 24 VAL 23 D ALA 24 n 25 ALA 24 D ARG 25 n 26 ARG 25 D LEU 26 n 27 LEU 26 D LYS 27 n 28 LYS 27 D LYS 28 n 29 LYS 28 D LYS 29 n 30 LYS 29 D ASN 30 n 31 ASN 30 D ALA 31 n 32 ALA 31 D GLU 32 n 33 GLU 32 D CYS 33 n 34 CYS 33 D LYS 34 n 35 LYS 34 D n 36 35 D ACE 0 n 1 ACE 0 E LYS 1 n 2 LYS 1 E VAL 2 n 3 VAL 2 E ALA 3 n 4 LYS 3 E ALA 4 n 5 GLN 4 E LEU 5 n 6 LEU 5 E LYS 6 n 7 LYS 6 E ALA 7 n 8 ALA 7 E LYS 8 n 9 LYS 8 E VAL 9 n 10 VAL 9 E GLU 10 n 11 GLU 10 E GLU 11 n 12 GLU 11 E LEU 12 n 13 LEU 12 E LYS 13 n 14 LYS 13 E SER 14 n 15 SER 14 E LYS 15 n 16 LYS 15 E LEU 16 n 17 LEU 16 E TRP 17 n 18 TRP 17 E HIS 18 n 19 HIS 18 E LEU 19 n 20 LEU 19 E LYS 20 n 21 LYS 20 E ASN 21 n 22 ASN 21 E LYS 22 n 23 LYS 22 E VAL 23 n 24 VAL 23 E ALA 24 n 25 ALA 24 E ARG 25 n 26 ARG 25 E LEU 26 n 27 LEU 26 E LYS 27 n 28 LYS 27 E ALA 28 n 29 LYS 28 E LYS 29 n 30 LYS 29 E ASN 30 n 31 ASN 30 E ALA 31 n 32 ALA 31 E ALA 32 n 33 GLU 32 E CYS 33 n 34 CYS 33 E LYS 34 n 35 LYS 34 E n 36 35 E ACE 0 n 1 ACE 0 F GLU 1 n 2 GLU 1 F VAL 2 n 3 VAL 2 F LYS 3 n 4 LYS 3 F GLN 4 n 5 GLN 4 F LEU 5 n 6 LEU 5 F GLU 6 n 7 GLU 6 F ALA 7 n 8 ALA 7 F GLU 8 n 9 GLU 8 F VAL 9 n 10 VAL 9 F GLU 10 n 11 GLU 10 F GLU 11 n 12 GLU 11 F LEU 12 n 13 LEU 12 F GLU 13 n 14 GLU 13 F SER 14 n 15 SER 14 F GLU 15 n 16 GLU 15 F LEU 16 n 17 LEU 16 F TRP 17 n 18 TRP 17 F HIS 18 n 19 HIS 18 F LEU 19 n 20 LEU 19 F GLU 20 n 21 GLU 20 F ASN 21 n 22 ASN 21 F GLU 22 n 23 GLU 22 F VAL 23 n 24 VAL 23 F ALA 24 n 25 ALA 24 F ARG 25 n 26 ARG 25 F LEU 26 n 27 LEU 26 F GLU 27 n 28 GLU 27 F LYS 28 n 29 LYS 28 F ALA 29 n 30 GLU 29 F ASN 30 n 31 ASN 30 F ALA 31 n 32 ALA 31 F GLU 32 n 33 GLU 32 F CYS 33 n 34 CYS 33 F ALA 34 n 35 GLU 34 F ALA 35 n 36 ALA 35 F author_and_software_defined_assembly PISA 2 dimeric author_and_software_defined_assembly PISA 2 dimeric author_and_software_defined_assembly PISA 2 dimeric 2070 -21 5030 2190 -25 5180 2220 -25 5120 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A CD GLU 1 A CD GLU 2 1 Y 1 A OE1 GLU 1 A OE1 GLU 2 1 Y 1 A OE2 GLU 1 A OE2 GLU 2 1 Y 1 A CD LYS 3 A CD LYS 4 1 Y 1 A CE LYS 3 A CE LYS 4 1 Y 1 A NZ LYS 3 A NZ LYS 4 1 Y 1 A CG GLN 4 A CG GLN 5 1 Y 1 A CD GLN 4 A CD GLN 5 1 Y 1 A OE1 GLN 4 A OE1 GLN 5 1 Y 1 A NE2 GLN 4 A NE2 GLN 5 1 Y 1 A CG GLU 6 A CG GLU 7 1 Y 1 A CD GLU 6 A CD GLU 7 1 Y 1 A OE1 GLU 6 A OE1 GLU 7 1 Y 1 A OE2 GLU 6 A OE2 GLU 7 1 Y 1 A CG GLU 11 A CG GLU 12 1 Y 1 A CD GLU 11 A CD GLU 12 1 Y 1 A OE1 GLU 11 A OE1 GLU 12 1 Y 1 A OE2 GLU 11 A OE2 GLU 12 1 Y 1 A OG SER 14 A OG SER 15 1 Y 1 A CG ARG 25 A CG ARG 26 1 Y 1 A CD ARG 25 A CD ARG 26 1 Y 1 A NE ARG 25 A NE ARG 26 1 Y 1 A CZ ARG 25 A CZ ARG 26 1 Y 1 A NH1 ARG 25 A NH1 ARG 26 1 Y 1 A NH2 ARG 25 A NH2 ARG 26 1 Y 1 B CG LYS 3 B CG LYS 4 1 Y 1 B CD LYS 3 B CD LYS 4 1 Y 1 B CE LYS 3 B CE LYS 4 1 Y 1 B NZ LYS 3 B NZ LYS 4 1 Y 1 B CG GLN 4 B CG GLN 5 1 Y 1 B CD GLN 4 B CD GLN 5 1 Y 1 B OE1 GLN 4 B OE1 GLN 5 1 Y 1 B NE2 GLN 4 B NE2 GLN 5 1 Y 1 B CD LYS 6 B CD LYS 7 1 Y 1 B CE LYS 6 B CE LYS 7 1 Y 1 B NZ LYS 6 B NZ LYS 7 1 Y 1 B OG SER 14 B OG SER 15 1 Y 1 B CG LYS 34 B CG LYS 35 1 Y 1 B CD LYS 34 B CD LYS 35 1 Y 1 B CE LYS 34 B CE LYS 35 1 Y 1 B NZ LYS 34 B NZ LYS 35 1 Y 1 C CD GLU 1 C CD GLU 2 1 Y 1 C OE1 GLU 1 C OE1 GLU 2 1 Y 1 C OE2 GLU 1 C OE2 GLU 2 1 Y 1 C CD GLU 29 C CD GLU 30 1 Y 1 C OE1 GLU 29 C OE1 GLU 30 1 Y 1 C OE2 GLU 29 C OE2 GLU 30 1 Y 1 C CD GLU 32 C CD GLU 33 1 Y 1 C OE1 GLU 32 C OE1 GLU 33 1 Y 1 C OE2 GLU 32 C OE2 GLU 33 1 Y 1 C CD GLU 34 C CD GLU 35 1 Y 1 C OE1 GLU 34 C OE1 GLU 35 1 Y 1 C OE2 GLU 34 C OE2 GLU 35 1 Y 1 D CG LYS 3 D CG LYS 4 1 Y 1 D CD LYS 3 D CD LYS 4 1 Y 1 D CE LYS 3 D CE LYS 4 1 Y 1 D NZ LYS 3 D NZ LYS 4 1 Y 1 D CG LYS 34 D CG LYS 35 1 Y 1 D CD LYS 34 D CD LYS 35 1 Y 1 D CE LYS 34 D CE LYS 35 1 Y 1 D NZ LYS 34 D NZ LYS 35 1 Y 1 E CG LYS 3 E CG LYS 4 1 Y 1 E CD LYS 3 E CD LYS 4 1 Y 1 E CE LYS 3 E CE LYS 4 1 Y 1 E NZ LYS 3 E NZ LYS 4 1 Y 1 E CG GLN 4 E CG GLN 5 1 Y 1 E CD GLN 4 E CD GLN 5 1 Y 1 E OE1 GLN 4 E OE1 GLN 5 1 Y 1 E NE2 GLN 4 E NE2 GLN 5 1 Y 1 E CG LYS 28 E CG LYS 29 1 Y 1 E CD LYS 28 E CD LYS 29 1 Y 1 E CE LYS 28 E CE LYS 29 1 Y 1 E NZ LYS 28 E NZ LYS 29 1 Y 1 E CG GLU 32 E CG GLU 33 1 Y 1 E CD GLU 32 E CD GLU 33 1 Y 1 E OE1 GLU 32 E OE1 GLU 33 1 Y 1 E OE2 GLU 32 E OE2 GLU 33 1 Y 1 E CG LYS 34 E CG LYS 35 1 Y 1 E CD LYS 34 E CD LYS 35 1 Y 1 E CE LYS 34 E CE LYS 35 1 Y 1 E NZ LYS 34 E NZ LYS 35 1 Y 1 F CG GLU 29 F CG GLU 30 1 Y 1 F CD GLU 29 F CD GLU 30 1 Y 1 F OE1 GLU 29 F OE1 GLU 30 1 Y 1 F OE2 GLU 29 F OE2 GLU 30 1 Y 1 F CG GLU 34 F CG GLU 35 1 Y 1 F CD GLU 34 F CD GLU 35 1 Y 1 F OE1 GLU 34 F OE1 GLU 35 1 Y 1 F OE2 GLU 34 F OE2 GLU 35 1 Y 1 B ACE 0 B ACE 1 1 Y 1 D ALA 35 D ALA 36 1 Y 1 E ALA 35 E ALA 36 1 Y 1 B B NE O ARG HOH 25 40 2.11 1 B VAL 2 -38.86 -36.14 58.2 1.01 0.00 0.00 1.01 0.00 -2.03 0.2963 0.007 0.2417 2.1 10. 1788 17771 17771 10.1 98.8 random 1 restrained THROUGHOUT 0 MOLECULAR REPLACEMENT calculated structure ENGH & HUBER flat model 91.0823 0.440279 0.40 0.30 5.0 0.32 0.24 2.1 10. 174 1822 0 0 1648 0.013009 1.40254 14.8 0.98 0.374 0.022 0.309 2.23 302 2624 6 10.3 99.4 34.8 2.0 35 1KD9 20141 20141 0 0 0.04 1 98.3 0.337 2.0 2.07 99.4 data reduction DENZO data scaling SCALEPACK phasing AMoRE refinement CNS 1.0 X-RAY STRUCTURE OF THE COILED COIL GCN4 ACID BASE HETERODIMER ACID-d12La16L BASE-d12La16L 1 N N 2 N N 1 N N 2 N N 2 N N 1 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N The assembly is a dimer. There are three copies of the dimer intact in the asymmetric unit. A GLU 1 A GLU 2 HELX_P A ALA 35 A ALA 36 1 1 35 B LYS 1 B LYS 2 HELX_P B ALA 35 B ALA 36 1 2 35 C GLU 1 C GLU 2 HELX_P C ALA 35 C ALA 36 1 3 35 D LYS 1 D LYS 2 HELX_P D LYS 34 D LYS 35 1 4 34 E LYS 1 E LYS 2 HELX_P E LYS 34 E LYS 35 1 5 34 F GLU 1 F GLU 2 HELX_P F ALA 35 F ALA 36 1 6 35 disulf 2.049 A CYS 33 A SG CYS 34 1_555 B CYS 33 B SG CYS 34 1_555 disulf 2.034 C CYS 33 C SG CYS 34 1_555 D CYS 33 D SG CYS 34 1_555 disulf 2.039 E CYS 33 E SG CYS 34 1_555 F CYS 33 F SG CYS 34 1_555 covale 1.332 both A ACE 0 A C ACE 1 1_555 A GLU 1 A N GLU 2 1_555 covale 1.328 both C ACE 0 C C ACE 1 1_555 C GLU 1 C N GLU 2 1_555 covale 1.332 both D ACE 0 D C ACE 1 1_555 D LYS 1 D N LYS 2 1_555 covale 1.326 both E ACE 0 E C ACE 1 1_555 E LYS 1 E N LYS 2 1_555 covale 1.324 both F ACE 0 F C ACE 1 1_555 F GLU 1 F N GLU 2 1_555 DE NOVO PROTEIN coiled coil heterodimer, DE NOVO PROTEIN 1KD9 PDB 1 1KD9 1KD9 PDB 2 1KD9 0 35 1KD9 0 35 1KD9 A 1 1 36 0 35 1KD9 0 35 1KD9 B 2 1 36 0 35 1KD9 0 35 1KD9 C 1 1 36 0 35 1KD9 0 35 1KD9 D 2 1 36 0 35 1KD9 0 35 1KD9 E 2 1 36 0 35 1KD9 0 35 1KD9 F 1 1 36 92 P 41 21 2