0.009194 0.000000 0.000000 0.000000 0.009194 0.000000 0.000000 0.000000 0.013761 0.00000 0.00000 0.00000 Olson, L.J. Zhang, J. Dahms, N.M. Kim, J.J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 16 90.00 90.00 90.00 108.772 108.772 72.670 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C8 H15 N O6 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE D-saccharide, beta linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US J.Biol.Chem. JBCHA3 0071 0021-9258 277 10156 10161 10.1074/jbc.M112230200 11786557 Twists and turns of the cation-dependent mannose 6-phosphate receptor. Ligand-bound versus ligand-free receptor 2002 US Cell(Cambridge,Mass.) CELLB5 0998 0092-8674 93 639 648 10.1016/S0092-8674(00)81192-7 MOLECULAR BASIS OF LYSOSOMAL ENZYME RECOGNITION: THREE-DIMENSIONAL STRUCTURE OF THE CATION-DEPENDENT MANNOSE 6-PHOSPHATE RECEPTOR 1998 US J.Biol.Chem. JBCHA3 0071 0021-9258 274 29889 29896 10.1074/jbc.274.42.29889 STRUCTURAL BASIS FOR RECOGNITION OF PHOSPHORYLATED HIGH-MANNOSE OLIGOSACCHARIDES BY THE CATION-DEPENDENT MANNOSE 6-PHOSPHATE RECEPTOR 1999 10.2210/pdb1keo/pdb pdb_00001keo NAG A 201 HAS WRONG CHIRALITY AT ATOM C1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 277 1 IMAGE PLATE 1998-01-09 RIGAKU RAXIS IIC SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RU200 17443.580 cation-dependent mannose-6-phosphate receptor (Residues 29-182) N31Q, N57Q, N68Q, N87Q 2 man polymer 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose 2 man non-polymer 18.015 water 75 nat water truncated at residue 154, glycosylation deficient mutant CD MAN-6-P RECEPTOR, CD-MPR, 46 KDA MANNOSE 6-PHOSPHATE RECEPTOR, MPR 46 no no TEEKTCDLVGEKGKESEKELALLKRLTPLFQKSFESTVGQSPDMYSYVFRVCREAGQHSSGAGLVQIQKSNGKETVVGRF NETQIFQGSNWIMLIYKGGDEYDNHCGREQRRAVVMISCNRHTLADNFNPVSEERGKVQDCFYLFEMDSSLACS TEEKTCDLVGEKGKESEKELALLKRLTPLFQKSFESTVGQSPDMYSYVFRVCREAGQHSSGAGLVQIQKSNGKETVVGRF NETQIFQGSNWIMLIYKGGDEYDNHCGREQRRAVVMISCNRHTLADNFNPVSEERGKVQDCFYLFEMDSSLACS A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n cattle Bos cabbage looper Trichoplusia sample 9913 Bos taurus BTI-TN-5B1-4 7111 Trichoplusia ni baculovirus 2 3.08 60.07 VAPOR DIFFUSION, SITTING DROP 6.5 25% PEG 5000 monomethyl ether, 0.2M ammonium acetate, 0.1M cacodoylate, 150 mM Nacl, 50 mM imidazole (pH=6.5), 10 mM Manganese chloride, 5 mM beta-glycerophosphate, VAPOR DIFFUSION, SITTING DROP, temperature 292K 292 chem_comp database_PDB_caveat entity pdbx_chem_comp_identifier pdbx_entity_nonpoly struct_conn struct_site struct_site_gen chem_comp database_2 struct_ref_seq_dif repository Initial release Carbohydrate remediation repository Remediation Version format compliance Non-polymer description Version format compliance Advisory Data collection Derived calculations Structure summary Database references Structure summary 1 0 2002-01-23 1 1 2008-04-27 1 2 2011-07-13 1 3 2020-07-29 1 4 2021-10-27 _chem_comp.name _chem_comp.type _entity.pdbx_description _pdbx_entity_nonpoly.name _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_role _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_label_asym_id _chem_comp.pdbx_synonyms _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details DGlcpNAcb N-acetyl-b-D-glucopyranosamine b-D-GlcpNAc GlcNAc 1M6P contains the same protein complexed with mannose 6-phosphate 1C39 contains the same protein complexed to pentamannosyl phosphate RCSB Y RCSB 2001-11-16 REL REL NAG 2-acetamido-2-deoxy-beta-D-glucopyranose HOH water NAG 201 2 NAG NAG 201 A NAG 201 2 NAG NAG 201 B WAT 2001 3 HOH HOH 2001 A WAT 2002 3 HOH HOH 2002 A WAT 2003 3 HOH HOH 2003 A WAT 2004 3 HOH HOH 2004 A WAT 2005 3 HOH HOH 2005 A WAT 2006 3 HOH HOH 2006 A WAT 2007 3 HOH HOH 2007 A WAT 2015 3 HOH HOH 2015 A WAT 2017 3 HOH HOH 2017 A WAT 2018 3 HOH HOH 2018 A WAT 2020 3 HOH HOH 2020 A WAT 2023 3 HOH HOH 2023 A WAT 2027 3 HOH HOH 2027 A WAT 2028 3 HOH HOH 2028 A WAT 2031 3 HOH HOH 2031 A WAT 2032 3 HOH HOH 2032 A WAT 2033 3 HOH HOH 2033 A WAT 2036 3 HOH HOH 2036 A WAT 2037 3 HOH HOH 2037 A WAT 2038 3 HOH HOH 2038 A WAT 2039 3 HOH HOH 2039 A WAT 2040 3 HOH HOH 2040 A WAT 2041 3 HOH HOH 2041 A WAT 2042 3 HOH HOH 2042 A WAT 2043 3 HOH HOH 2043 A WAT 2044 3 HOH HOH 2044 A WAT 2045 3 HOH HOH 2045 A WAT 2046 3 HOH HOH 2046 A WAT 2047 3 HOH HOH 2047 A WAT 2052 3 HOH HOH 2052 A WAT 2053 3 HOH HOH 2053 A WAT 2055 3 HOH HOH 2055 A WAT 2056 3 HOH HOH 2056 A WAT 2057 3 HOH HOH 2057 A WAT 2061 3 HOH HOH 2061 A WAT 2062 3 HOH HOH 2062 A WAT 2066 3 HOH HOH 2066 A WAT 2069 3 HOH HOH 2069 A WAT 2071 3 HOH HOH 2071 A WAT 2074 3 HOH HOH 2074 A WAT 2008 3 HOH HOH 2008 B WAT 2009 3 HOH HOH 2009 B WAT 2010 3 HOH HOH 2010 B WAT 2011 3 HOH HOH 2011 B WAT 2012 3 HOH HOH 2012 B WAT 2013 3 HOH HOH 2013 B WAT 2014 3 HOH HOH 2014 B WAT 2016 3 HOH HOH 2016 B WAT 2019 3 HOH HOH 2019 B WAT 2021 3 HOH HOH 2021 B WAT 2022 3 HOH HOH 2022 B WAT 2024 3 HOH HOH 2024 B WAT 2025 3 HOH HOH 2025 B WAT 2026 3 HOH HOH 2026 B WAT 2029 3 HOH HOH 2029 B WAT 2030 3 HOH HOH 2030 B WAT 2034 3 HOH HOH 2034 B WAT 2035 3 HOH HOH 2035 B WAT 2048 3 HOH HOH 2048 B WAT 2049 3 HOH HOH 2049 B WAT 2050 3 HOH HOH 2050 B WAT 2051 3 HOH HOH 2051 B WAT 2054 3 HOH HOH 2054 B WAT 2058 3 HOH HOH 2058 B WAT 2059 3 HOH HOH 2059 B WAT 2060 3 HOH HOH 2060 B WAT 2063 3 HOH HOH 2063 B WAT 2064 3 HOH HOH 2064 B WAT 2065 3 HOH HOH 2065 B WAT 2067 3 HOH HOH 2067 B WAT 2068 3 HOH HOH 2068 B WAT 2070 3 HOH HOH 2070 B WAT 2072 3 HOH HOH 2072 B WAT 2073 3 HOH HOH 2073 B WAT 2075 3 HOH HOH 2075 B n 1 1 A n 2 2 A GLU 3 n 3 GLU 3 A LYS 4 n 4 LYS 4 A THR 5 n 5 THR 5 A CYS 6 n 6 CYS 6 A ASP 7 n 7 ASP 7 A LEU 8 n 8 LEU 8 A VAL 9 n 9 VAL 9 A GLY 10 n 10 GLY 10 A GLU 11 n 11 GLU 11 A LYS 12 n 12 LYS 12 A GLY 13 n 13 GLY 13 A LYS 14 n 14 LYS 14 A GLU 15 n 15 GLU 15 A SER 16 n 16 SER 16 A GLU 17 n 17 GLU 17 A LYS 18 n 18 LYS 18 A GLU 19 n 19 GLU 19 A LEU 20 n 20 LEU 20 A ALA 21 n 21 ALA 21 A LEU 22 n 22 LEU 22 A LEU 23 n 23 LEU 23 A LYS 24 n 24 LYS 24 A ARG 25 n 25 ARG 25 A LEU 26 n 26 LEU 26 A THR 27 n 27 THR 27 A PRO 28 n 28 PRO 28 A LEU 29 n 29 LEU 29 A PHE 30 n 30 PHE 30 A GLN 31 n 31 GLN 31 A LYS 32 n 32 LYS 32 A SER 33 n 33 SER 33 A PHE 34 n 34 PHE 34 A GLU 35 n 35 GLU 35 A SER 36 n 36 SER 36 A THR 37 n 37 THR 37 A VAL 38 n 38 VAL 38 A GLY 39 n 39 GLY 39 A GLN 40 n 40 GLN 40 A SER 41 n 41 SER 41 A PRO 42 n 42 PRO 42 A ASP 43 n 43 ASP 43 A MET 44 n 44 MET 44 A TYR 45 n 45 TYR 45 A SER 46 n 46 SER 46 A TYR 47 n 47 TYR 47 A VAL 48 n 48 VAL 48 A PHE 49 n 49 PHE 49 A ARG 50 n 50 ARG 50 A VAL 51 n 51 VAL 51 A CYS 52 n 52 CYS 52 A ARG 53 n 53 ARG 53 A GLU 54 n 54 GLU 54 A ALA 55 n 55 ALA 55 A GLY 56 n 56 GLY 56 A GLN 57 n 57 GLN 57 A HIS 58 n 58 HIS 58 A SER 59 n 59 SER 59 A SER 60 n 60 SER 60 A GLY 61 n 61 GLY 61 A ALA 62 n 62 ALA 62 A GLY 63 n 63 GLY 63 A LEU 64 n 64 LEU 64 A VAL 65 n 65 VAL 65 A GLN 66 n 66 GLN 66 A ILE 67 n 67 ILE 67 A GLN 68 n 68 GLN 68 A LYS 69 n 69 LYS 69 A SER 70 n 70 SER 70 A ASN 71 n 71 ASN 71 A GLY 72 n 72 GLY 72 A LYS 73 n 73 LYS 73 A GLU 74 n 74 GLU 74 A THR 75 n 75 THR 75 A VAL 76 n 76 VAL 76 A VAL 77 n 77 VAL 77 A GLY 78 n 78 GLY 78 A ARG 79 n 79 ARG 79 A PHE 80 n 80 PHE 80 A ASN 81 n 81 ASN 81 A GLU 82 n 82 GLU 82 A THR 83 n 83 THR 83 A GLN 84 n 84 GLN 84 A ILE 85 n 85 ILE 85 A PHE 86 n 86 PHE 86 A GLN 87 n 87 GLN 87 A GLY 88 n 88 GLY 88 A SER 89 n 89 SER 89 A ASN 90 n 90 ASN 90 A TRP 91 n 91 TRP 91 A ILE 92 n 92 ILE 92 A MET 93 n 93 MET 93 A LEU 94 n 94 LEU 94 A ILE 95 n 95 ILE 95 A TYR 96 n 96 TYR 96 A LYS 97 n 97 LYS 97 A GLY 98 n 98 GLY 98 A GLY 99 n 99 GLY 99 A ASP 100 n 100 ASP 100 A GLU 101 n 101 GLU 101 A TYR 102 n 102 TYR 102 A ASP 103 n 103 ASP 103 A ASN 104 n 104 ASN 104 A HIS 105 n 105 HIS 105 A CYS 106 n 106 CYS 106 A GLY 107 n 107 GLY 107 A ARG 108 n 108 ARG 108 A GLU 109 n 109 GLU 109 A GLN 110 n 110 GLN 110 A ARG 111 n 111 ARG 111 A ARG 112 n 112 ARG 112 A ALA 113 n 113 ALA 113 A VAL 114 n 114 VAL 114 A VAL 115 n 115 VAL 115 A MET 116 n 116 MET 116 A ILE 117 n 117 ILE 117 A SER 118 n 118 SER 118 A CYS 119 n 119 CYS 119 A ASN 120 n 120 ASN 120 A ARG 121 n 121 ARG 121 A HIS 122 n 122 HIS 122 A THR 123 n 123 THR 123 A LEU 124 n 124 LEU 124 A ALA 125 n 125 ALA 125 A ASP 126 n 126 ASP 126 A ASN 127 n 127 ASN 127 A PHE 128 n 128 PHE 128 A ASN 129 n 129 ASN 129 A PRO 130 n 130 PRO 130 A VAL 131 n 131 VAL 131 A SER 132 n 132 SER 132 A GLU 133 n 133 GLU 133 A GLU 134 n 134 GLU 134 A ARG 135 n 135 ARG 135 A GLY 136 n 136 GLY 136 A LYS 137 n 137 LYS 137 A VAL 138 n 138 VAL 138 A GLN 139 n 139 GLN 139 A ASP 140 n 140 ASP 140 A CYS 141 n 141 CYS 141 A PHE 142 n 142 PHE 142 A TYR 143 n 143 TYR 143 A LEU 144 n 144 LEU 144 A PHE 145 n 145 PHE 145 A GLU 146 n 146 GLU 146 A MET 147 n 147 MET 147 A ASP 148 n 148 ASP 148 A SER 149 n 149 SER 149 A SER 150 n 150 SER 150 A LEU 151 n 151 LEU 151 A ALA 152 n 152 ALA 152 A CYS 153 n 153 CYS 153 A SER 154 n 154 SER 154 A n 1 1 B n 2 2 B GLU 3 n 3 GLU 3 B LYS 4 n 4 LYS 4 B THR 5 n 5 THR 5 B CYS 6 n 6 CYS 6 B ASP 7 n 7 ASP 7 B LEU 8 n 8 LEU 8 B VAL 9 n 9 VAL 9 B GLY 10 n 10 GLY 10 B GLU 11 n 11 GLU 11 B LYS 12 n 12 LYS 12 B GLY 13 n 13 GLY 13 B LYS 14 n 14 LYS 14 B GLU 15 n 15 GLU 15 B SER 16 n 16 SER 16 B GLU 17 n 17 GLU 17 B LYS 18 n 18 LYS 18 B GLU 19 n 19 GLU 19 B LEU 20 n 20 LEU 20 B ALA 21 n 21 ALA 21 B LEU 22 n 22 LEU 22 B LEU 23 n 23 LEU 23 B LYS 24 n 24 LYS 24 B ARG 25 n 25 ARG 25 B LEU 26 n 26 LEU 26 B THR 27 n 27 THR 27 B PRO 28 n 28 PRO 28 B LEU 29 n 29 LEU 29 B PHE 30 n 30 PHE 30 B GLN 31 n 31 GLN 31 B LYS 32 n 32 LYS 32 B SER 33 n 33 SER 33 B PHE 34 n 34 PHE 34 B GLU 35 n 35 GLU 35 B SER 36 n 36 SER 36 B THR 37 n 37 THR 37 B VAL 38 n 38 VAL 38 B GLY 39 n 39 GLY 39 B GLN 40 n 40 GLN 40 B SER 41 n 41 SER 41 B PRO 42 n 42 PRO 42 B ASP 43 n 43 ASP 43 B MET 44 n 44 MET 44 B TYR 45 n 45 TYR 45 B SER 46 n 46 SER 46 B TYR 47 n 47 TYR 47 B VAL 48 n 48 VAL 48 B PHE 49 n 49 PHE 49 B ARG 50 n 50 ARG 50 B VAL 51 n 51 VAL 51 B CYS 52 n 52 CYS 52 B ARG 53 n 53 ARG 53 B GLU 54 n 54 GLU 54 B ALA 55 n 55 ALA 55 B GLY 56 n 56 GLY 56 B GLN 57 n 57 GLN 57 B HIS 58 n 58 HIS 58 B SER 59 n 59 SER 59 B SER 60 n 60 SER 60 B GLY 61 n 61 GLY 61 B ALA 62 n 62 ALA 62 B GLY 63 n 63 GLY 63 B LEU 64 n 64 LEU 64 B VAL 65 n 65 VAL 65 B GLN 66 n 66 GLN 66 B ILE 67 n 67 ILE 67 B GLN 68 n 68 GLN 68 B LYS 69 n 69 LYS 69 B SER 70 n 70 SER 70 B ASN 71 n 71 ASN 71 B GLY 72 n 72 GLY 72 B LYS 73 n 73 LYS 73 B GLU 74 n 74 GLU 74 B THR 75 n 75 THR 75 B VAL 76 n 76 VAL 76 B VAL 77 n 77 VAL 77 B GLY 78 n 78 GLY 78 B ARG 79 n 79 ARG 79 B PHE 80 n 80 PHE 80 B ASN 81 n 81 ASN 81 B GLU 82 n 82 GLU 82 B THR 83 n 83 THR 83 B GLN 84 n 84 GLN 84 B ILE 85 n 85 ILE 85 B PHE 86 n 86 PHE 86 B GLN 87 n 87 GLN 87 B GLY 88 n 88 GLY 88 B SER 89 n 89 SER 89 B ASN 90 n 90 ASN 90 B TRP 91 n 91 TRP 91 B ILE 92 n 92 ILE 92 B MET 93 n 93 MET 93 B LEU 94 n 94 LEU 94 B ILE 95 n 95 ILE 95 B TYR 96 n 96 TYR 96 B LYS 97 n 97 LYS 97 B GLY 98 n 98 GLY 98 B GLY 99 n 99 GLY 99 B ASP 100 n 100 ASP 100 B GLU 101 n 101 GLU 101 B TYR 102 n 102 TYR 102 B ASP 103 n 103 ASP 103 B ASN 104 n 104 ASN 104 B HIS 105 n 105 HIS 105 B CYS 106 n 106 CYS 106 B GLY 107 n 107 GLY 107 B ARG 108 n 108 ARG 108 B GLU 109 n 109 GLU 109 B GLN 110 n 110 GLN 110 B ARG 111 n 111 ARG 111 B ARG 112 n 112 ARG 112 B ALA 113 n 113 ALA 113 B VAL 114 n 114 VAL 114 B VAL 115 n 115 VAL 115 B MET 116 n 116 MET 116 B ILE 117 n 117 ILE 117 B SER 118 n 118 SER 118 B CYS 119 n 119 CYS 119 B ASN 120 n 120 ASN 120 B ARG 121 n 121 ARG 121 B HIS 122 n 122 HIS 122 B THR 123 n 123 THR 123 B LEU 124 n 124 LEU 124 B ALA 125 n 125 ALA 125 B ASP 126 n 126 ASP 126 B ASN 127 n 127 ASN 127 B PHE 128 n 128 PHE 128 B ASN 129 n 129 ASN 129 B PRO 130 n 130 PRO 130 B VAL 131 n 131 VAL 131 B SER 132 n 132 SER 132 B GLU 133 n 133 GLU 133 B GLU 134 n 134 GLU 134 B ARG 135 n 135 ARG 135 B GLY 136 n 136 GLY 136 B LYS 137 n 137 LYS 137 B VAL 138 n 138 VAL 138 B GLN 139 n 139 GLN 139 B ASP 140 n 140 ASP 140 B CYS 141 n 141 CYS 141 B PHE 142 n 142 PHE 142 B TYR 143 n 143 TYR 143 B LEU 144 n 144 LEU 144 B PHE 145 n 145 PHE 145 B GLU 146 n 146 GLU 146 B MET 147 n 147 MET 147 B ASP 148 n 148 ASP 148 B SER 149 n 149 SER 149 B SER 150 n 150 SER 150 B LEU 151 n 151 LEU 151 B ALA 152 n 152 ALA 152 B CYS 153 n 153 CYS 153 B SER 154 n 154 SER 154 B author_and_software_defined_assembly PISA 2 dimeric 2010 -0 14940 B ASN 81 GLYCOSYLATION SITE B ASN 81 ASN A ASN 81 GLYCOSYLATION SITE A ASN 81 ASN 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N PHE 34 A N PHE 34 A O PHE 49 A O PHE 49 A N SER 46 A N SER 46 A O ILE 67 A O ILE 67 A N GLN 66 A N GLN 66 A O THR 75 A O THR 75 A N PHE 86 A N PHE 86 A O MET 93 A O MET 93 A N TYR 96 A N TYR 96 A O ALA 113 A O ALA 113 A N MET 116 A N MET 116 A O PHE 145 A O PHE 145 A O ASP 148 A O ASP 148 A N ASP 126 A N ASP 126 B N SER 36 B N SER 36 B O TYR 47 B O TYR 47 B N SER 46 B N SER 46 B O ILE 67 B O ILE 67 B N GLN 66 B N GLN 66 B O THR 75 B O THR 75 B N GLN 84 B N GLN 84 B O ILE 95 B O ILE 95 B N TYR 96 B N TYR 96 B O ALA 113 B O ALA 113 B N MET 116 B N MET 116 B O PHE 145 B O PHE 145 B O ASP 148 B O ASP 148 B N ASP 126 B N ASP 126 1 A THR 1 A THR 1 1 Y 1 A GLU 2 A GLU 2 1 Y 1 B THR 1 B THR 1 1 Y 1 B GLU 2 B GLU 2 1 Y 1 A C1 NAG 201 WRONG HAND 1 B B OE1 N GLU GLY 54 61 2.09 1 A LYS 12 -38.40 104.57 1 A ASP 43 -97.82 36.77 1 A HIS 58 -95.22 -77.44 1 A ASN 71 -143.13 12.30 1 A LYS 97 -103.49 -167.27 1 A ASN 104 -165.36 -156.19 1 B GLU 11 -95.19 -131.24 1 B ASP 43 -93.16 34.02 1 B ASN 90 -142.52 51.16 1 B ASP 103 -111.42 55.03 1 B ALA 125 -172.97 126.32 1 B ASP 126 -171.84 -178.75 1 B ARG 135 -161.48 117.83 PROTEIN_REP.PARAM PROTEIN.TOP WATER_REP.PARAM CARBOHYDRATE.TOP CARBOHYDRATE.PARAM WATER_REP.TOP 43.2 1.61 0.00 0.00 1.61 0.00 -3.22 0.2483 0.006 0.215 2.20 30.0 1580 19965 18385 8.0 92.2 RANDOM 116851.23 0.000000 1 RESTRAINED THROUGHOUT 0.0 MOLECULAR REPLACEMENT FLAT MODEL 71.6488 0.353773 0.38 0.32 5.00 0.58 0.57 2.20 30.0 75 2508 29 0 2404 0.008 1.5 27.7 0.80 2.99 1.50 4.59 2.00 5.31 2.00 7.25 2.50 0.4583 0.043 0.3981 2.28 1208 1519 6 8.9 56.7 10.7 2.2 40.0 1KEO 18385 18385 0.0 0.087 1 6.2 94.9 0.49 2.20 2.24 138 1 70.5 data reduction DENZO data scaling SCALEPACK phasing AMoRE refinement CNS 1.0 TWISTS AND TURNS OF THE CD-MPR: LIGAND-BOUND VERSUS LIGAND-FREE RECEPTOR 1 N N 1 N N 2 N N 2 N N 3 N N 3 N N A SER 16 A SER 16 HELX_P A LEU 26 A LEU 26 1 1 11 A THR 27 A THR 27 HELX_P A PHE 30 A PHE 30 5 2 4 A SER 150 A SER 150 HELX_P A CYS 153 A CYS 153 5 3 4 B SER 16 B SER 16 HELX_P B LEU 26 B LEU 26 1 4 11 B THR 27 B THR 27 HELX_P B PHE 30 B PHE 30 5 5 4 B SER 150 B SER 150 HELX_P B CYS 153 B CYS 153 5 6 4 disulf 2.032 A CYS 6 A SG CYS 6 1_555 A CYS 52 A SG CYS 52 1_555 disulf 2.026 A CYS 106 A SG CYS 106 1_555 A CYS 141 A SG CYS 141 1_555 disulf 2.029 A CYS 119 A SG CYS 119 1_555 A CYS 153 A SG CYS 153 1_555 disulf 2.033 B CYS 6 B SG CYS 6 1_555 B CYS 52 B SG CYS 52 1_555 disulf 2.035 B CYS 106 B SG CYS 106 1_555 B CYS 141 B SG CYS 141 1_555 disulf 2.035 B CYS 119 B SG CYS 119 1_555 B CYS 153 B SG CYS 153 1_555 covale 1.454 one N-Glycosylation A ASN 81 A ND2 ASN 81 1_555 A NAG 201 C C1 NAG 1_555 covale 1.461 one N-Glycosylation B ASN 81 B ND2 ASN 81 1_555 B NAG 201 D C1 NAG 1_555 SUGAR BINDING PROTEIN p lectin, receptor, mannose 6-phosphate, SUGAR BINDING PROTEIN A SER 41 A SER 41 1 A PRO 42 A PRO 42 4.11 B SER 41 B SER 41 1 B PRO 42 B PRO 42 0.66 MPRD_BOVIN UNP 1 29 P11456 TEEKTCDLVGEKGKESEKELALLKRLTPLFNKSFESTVGQSPDMYSYVFRVCREAGNHSSGAGLVQINKSNGKETVVGRF NETQIFNGSNWIMLIYKGGDEYDNHCGREQRRAVVMISCNRHTLADNFNPVSEERGKVQDCFYLFEMDSSLACS 29 182 1KEO 1 154 P11456 A 1 1 154 29 182 1KEO 1 154 P11456 B 1 1 154 1 ASN engineered mutation GLN 31 1KEO A P11456 UNP 59 31 1 ASN engineered mutation GLN 57 1KEO A P11456 UNP 85 57 1 ASN engineered mutation GLN 68 1KEO A P11456 UNP 96 68 1 ASN engineered mutation GLN 87 1KEO A P11456 UNP 115 87 2 ASN engineered mutation GLN 31 1KEO B P11456 UNP 59 31 2 ASN engineered mutation GLN 57 1KEO B P11456 UNP 85 57 2 ASN engineered mutation GLN 68 1KEO B P11456 UNP 96 68 2 ASN engineered mutation GLN 87 1KEO B P11456 UNP 115 87 8 8 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel A PHE 34 A PHE 34 A VAL 38 A VAL 38 A TYR 45 A TYR 45 A PHE 49 A PHE 49 A ALA 62 A ALA 62 A GLN 68 A GLN 68 A GLU 74 A GLU 74 A GLN 87 A GLN 87 A TRP 91 A TRP 91 A GLU 101 A GLU 101 A GLN 110 A GLN 110 A CYS 119 A CYS 119 A VAL 138 A VAL 138 A SER 149 A SER 149 A ASP 126 A ASP 126 A ARG 135 A ARG 135 B PHE 34 B PHE 34 B VAL 38 B VAL 38 B TYR 45 B TYR 45 B PHE 49 B PHE 49 B ALA 62 B ALA 62 B GLN 68 B GLN 68 B GLU 74 B GLU 74 B GLY 88 B GLY 88 B TRP 91 B TRP 91 B LYS 97 B LYS 97 B ALA 113 B ALA 113 B CYS 119 B CYS 119 B VAL 138 B VAL 138 B SER 149 B SER 149 B ASP 126 B ASP 126 B ARG 135 B ARG 135 79 I 4