0.009194
0.000000
0.000000
0.000000
0.009194
0.000000
0.000000
0.000000
0.013761
0.00000
0.00000
0.00000
Olson, L.J.
Zhang, J.
Dahms, N.M.
Kim, J.J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
16
90.00
90.00
90.00
108.772
108.772
72.670
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C8 H15 N O6
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE
D-saccharide, beta linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
277
10156
10161
10.1074/jbc.M112230200
11786557
Twists and turns of the cation-dependent mannose 6-phosphate receptor. Ligand-bound versus ligand-free receptor
2002
US
Cell(Cambridge,Mass.)
CELLB5
0998
0092-8674
93
639
648
10.1016/S0092-8674(00)81192-7
MOLECULAR BASIS OF LYSOSOMAL ENZYME
RECOGNITION: THREE-DIMENSIONAL
STRUCTURE OF THE CATION-DEPENDENT MANNOSE
6-PHOSPHATE RECEPTOR
1998
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
274
29889
29896
10.1074/jbc.274.42.29889
STRUCTURAL BASIS FOR RECOGNITION OF PHOSPHORYLATED
HIGH-MANNOSE OLIGOSACCHARIDES BY THE
CATION-DEPENDENT MANNOSE 6-PHOSPHATE RECEPTOR
1999
10.2210/pdb1keo/pdb
pdb_00001keo
NAG A 201 HAS WRONG CHIRALITY AT ATOM C1
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
277
1
IMAGE PLATE
1998-01-09
RIGAKU RAXIS IIC
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
17443.580
cation-dependent mannose-6-phosphate receptor
(Residues 29-182)
N31Q, N57Q, N68Q, N87Q
2
man
polymer
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
2
man
non-polymer
18.015
water
75
nat
water
truncated at residue 154, glycosylation deficient mutant
CD MAN-6-P RECEPTOR, CD-MPR, 46 KDA MANNOSE 6-PHOSPHATE RECEPTOR, MPR 46
no
no
TEEKTCDLVGEKGKESEKELALLKRLTPLFQKSFESTVGQSPDMYSYVFRVCREAGQHSSGAGLVQIQKSNGKETVVGRF
NETQIFQGSNWIMLIYKGGDEYDNHCGREQRRAVVMISCNRHTLADNFNPVSEERGKVQDCFYLFEMDSSLACS
TEEKTCDLVGEKGKESEKELALLKRLTPLFQKSFESTVGQSPDMYSYVFRVCREAGQHSSGAGLVQIQKSNGKETVVGRF
NETQIFQGSNWIMLIYKGGDEYDNHCGREQRRAVVMISCNRHTLADNFNPVSEERGKVQDCFYLFEMDSSLACS
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
cattle
Bos
cabbage looper
Trichoplusia
sample
9913
Bos taurus
BTI-TN-5B1-4
7111
Trichoplusia ni
baculovirus
2
3.08
60.07
VAPOR DIFFUSION, SITTING DROP
6.5
25% PEG 5000 monomethyl ether, 0.2M ammonium acetate, 0.1M cacodoylate, 150 mM Nacl, 50 mM imidazole (pH=6.5), 10 mM Manganese chloride, 5 mM beta-glycerophosphate, VAPOR DIFFUSION, SITTING DROP, temperature 292K
292
chem_comp
database_PDB_caveat
entity
pdbx_chem_comp_identifier
pdbx_entity_nonpoly
struct_conn
struct_site
struct_site_gen
chem_comp
database_2
struct_ref_seq_dif
repository
Initial release
Carbohydrate remediation
repository
Remediation
Version format compliance
Non-polymer description
Version format compliance
Advisory
Data collection
Derived calculations
Structure summary
Database references
Structure summary
1
0
2002-01-23
1
1
2008-04-27
1
2
2011-07-13
1
3
2020-07-29
1
4
2021-10-27
_chem_comp.name
_chem_comp.type
_entity.pdbx_description
_pdbx_entity_nonpoly.name
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_role
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_label_asym_id
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
DGlcpNAcb
N-acetyl-b-D-glucopyranosamine
b-D-GlcpNAc
GlcNAc
1M6P contains the same protein complexed with mannose 6-phosphate
1C39 contains the same protein complexed to pentamannosyl phosphate
RCSB
Y
RCSB
2001-11-16
REL
REL
NAG
2-acetamido-2-deoxy-beta-D-glucopyranose
HOH
water
NAG
201
2
NAG
NAG
201
A
NAG
201
2
NAG
NAG
201
B
WAT
2001
3
HOH
HOH
2001
A
WAT
2002
3
HOH
HOH
2002
A
WAT
2003
3
HOH
HOH
2003
A
WAT
2004
3
HOH
HOH
2004
A
WAT
2005
3
HOH
HOH
2005
A
WAT
2006
3
HOH
HOH
2006
A
WAT
2007
3
HOH
HOH
2007
A
WAT
2015
3
HOH
HOH
2015
A
WAT
2017
3
HOH
HOH
2017
A
WAT
2018
3
HOH
HOH
2018
A
WAT
2020
3
HOH
HOH
2020
A
WAT
2023
3
HOH
HOH
2023
A
WAT
2027
3
HOH
HOH
2027
A
WAT
2028
3
HOH
HOH
2028
A
WAT
2031
3
HOH
HOH
2031
A
WAT
2032
3
HOH
HOH
2032
A
WAT
2033
3
HOH
HOH
2033
A
WAT
2036
3
HOH
HOH
2036
A
WAT
2037
3
HOH
HOH
2037
A
WAT
2038
3
HOH
HOH
2038
A
WAT
2039
3
HOH
HOH
2039
A
WAT
2040
3
HOH
HOH
2040
A
WAT
2041
3
HOH
HOH
2041
A
WAT
2042
3
HOH
HOH
2042
A
WAT
2043
3
HOH
HOH
2043
A
WAT
2044
3
HOH
HOH
2044
A
WAT
2045
3
HOH
HOH
2045
A
WAT
2046
3
HOH
HOH
2046
A
WAT
2047
3
HOH
HOH
2047
A
WAT
2052
3
HOH
HOH
2052
A
WAT
2053
3
HOH
HOH
2053
A
WAT
2055
3
HOH
HOH
2055
A
WAT
2056
3
HOH
HOH
2056
A
WAT
2057
3
HOH
HOH
2057
A
WAT
2061
3
HOH
HOH
2061
A
WAT
2062
3
HOH
HOH
2062
A
WAT
2066
3
HOH
HOH
2066
A
WAT
2069
3
HOH
HOH
2069
A
WAT
2071
3
HOH
HOH
2071
A
WAT
2074
3
HOH
HOH
2074
A
WAT
2008
3
HOH
HOH
2008
B
WAT
2009
3
HOH
HOH
2009
B
WAT
2010
3
HOH
HOH
2010
B
WAT
2011
3
HOH
HOH
2011
B
WAT
2012
3
HOH
HOH
2012
B
WAT
2013
3
HOH
HOH
2013
B
WAT
2014
3
HOH
HOH
2014
B
WAT
2016
3
HOH
HOH
2016
B
WAT
2019
3
HOH
HOH
2019
B
WAT
2021
3
HOH
HOH
2021
B
WAT
2022
3
HOH
HOH
2022
B
WAT
2024
3
HOH
HOH
2024
B
WAT
2025
3
HOH
HOH
2025
B
WAT
2026
3
HOH
HOH
2026
B
WAT
2029
3
HOH
HOH
2029
B
WAT
2030
3
HOH
HOH
2030
B
WAT
2034
3
HOH
HOH
2034
B
WAT
2035
3
HOH
HOH
2035
B
WAT
2048
3
HOH
HOH
2048
B
WAT
2049
3
HOH
HOH
2049
B
WAT
2050
3
HOH
HOH
2050
B
WAT
2051
3
HOH
HOH
2051
B
WAT
2054
3
HOH
HOH
2054
B
WAT
2058
3
HOH
HOH
2058
B
WAT
2059
3
HOH
HOH
2059
B
WAT
2060
3
HOH
HOH
2060
B
WAT
2063
3
HOH
HOH
2063
B
WAT
2064
3
HOH
HOH
2064
B
WAT
2065
3
HOH
HOH
2065
B
WAT
2067
3
HOH
HOH
2067
B
WAT
2068
3
HOH
HOH
2068
B
WAT
2070
3
HOH
HOH
2070
B
WAT
2072
3
HOH
HOH
2072
B
WAT
2073
3
HOH
HOH
2073
B
WAT
2075
3
HOH
HOH
2075
B
n
1
1
A
n
2
2
A
GLU
3
n
3
GLU
3
A
LYS
4
n
4
LYS
4
A
THR
5
n
5
THR
5
A
CYS
6
n
6
CYS
6
A
ASP
7
n
7
ASP
7
A
LEU
8
n
8
LEU
8
A
VAL
9
n
9
VAL
9
A
GLY
10
n
10
GLY
10
A
GLU
11
n
11
GLU
11
A
LYS
12
n
12
LYS
12
A
GLY
13
n
13
GLY
13
A
LYS
14
n
14
LYS
14
A
GLU
15
n
15
GLU
15
A
SER
16
n
16
SER
16
A
GLU
17
n
17
GLU
17
A
LYS
18
n
18
LYS
18
A
GLU
19
n
19
GLU
19
A
LEU
20
n
20
LEU
20
A
ALA
21
n
21
ALA
21
A
LEU
22
n
22
LEU
22
A
LEU
23
n
23
LEU
23
A
LYS
24
n
24
LYS
24
A
ARG
25
n
25
ARG
25
A
LEU
26
n
26
LEU
26
A
THR
27
n
27
THR
27
A
PRO
28
n
28
PRO
28
A
LEU
29
n
29
LEU
29
A
PHE
30
n
30
PHE
30
A
GLN
31
n
31
GLN
31
A
LYS
32
n
32
LYS
32
A
SER
33
n
33
SER
33
A
PHE
34
n
34
PHE
34
A
GLU
35
n
35
GLU
35
A
SER
36
n
36
SER
36
A
THR
37
n
37
THR
37
A
VAL
38
n
38
VAL
38
A
GLY
39
n
39
GLY
39
A
GLN
40
n
40
GLN
40
A
SER
41
n
41
SER
41
A
PRO
42
n
42
PRO
42
A
ASP
43
n
43
ASP
43
A
MET
44
n
44
MET
44
A
TYR
45
n
45
TYR
45
A
SER
46
n
46
SER
46
A
TYR
47
n
47
TYR
47
A
VAL
48
n
48
VAL
48
A
PHE
49
n
49
PHE
49
A
ARG
50
n
50
ARG
50
A
VAL
51
n
51
VAL
51
A
CYS
52
n
52
CYS
52
A
ARG
53
n
53
ARG
53
A
GLU
54
n
54
GLU
54
A
ALA
55
n
55
ALA
55
A
GLY
56
n
56
GLY
56
A
GLN
57
n
57
GLN
57
A
HIS
58
n
58
HIS
58
A
SER
59
n
59
SER
59
A
SER
60
n
60
SER
60
A
GLY
61
n
61
GLY
61
A
ALA
62
n
62
ALA
62
A
GLY
63
n
63
GLY
63
A
LEU
64
n
64
LEU
64
A
VAL
65
n
65
VAL
65
A
GLN
66
n
66
GLN
66
A
ILE
67
n
67
ILE
67
A
GLN
68
n
68
GLN
68
A
LYS
69
n
69
LYS
69
A
SER
70
n
70
SER
70
A
ASN
71
n
71
ASN
71
A
GLY
72
n
72
GLY
72
A
LYS
73
n
73
LYS
73
A
GLU
74
n
74
GLU
74
A
THR
75
n
75
THR
75
A
VAL
76
n
76
VAL
76
A
VAL
77
n
77
VAL
77
A
GLY
78
n
78
GLY
78
A
ARG
79
n
79
ARG
79
A
PHE
80
n
80
PHE
80
A
ASN
81
n
81
ASN
81
A
GLU
82
n
82
GLU
82
A
THR
83
n
83
THR
83
A
GLN
84
n
84
GLN
84
A
ILE
85
n
85
ILE
85
A
PHE
86
n
86
PHE
86
A
GLN
87
n
87
GLN
87
A
GLY
88
n
88
GLY
88
A
SER
89
n
89
SER
89
A
ASN
90
n
90
ASN
90
A
TRP
91
n
91
TRP
91
A
ILE
92
n
92
ILE
92
A
MET
93
n
93
MET
93
A
LEU
94
n
94
LEU
94
A
ILE
95
n
95
ILE
95
A
TYR
96
n
96
TYR
96
A
LYS
97
n
97
LYS
97
A
GLY
98
n
98
GLY
98
A
GLY
99
n
99
GLY
99
A
ASP
100
n
100
ASP
100
A
GLU
101
n
101
GLU
101
A
TYR
102
n
102
TYR
102
A
ASP
103
n
103
ASP
103
A
ASN
104
n
104
ASN
104
A
HIS
105
n
105
HIS
105
A
CYS
106
n
106
CYS
106
A
GLY
107
n
107
GLY
107
A
ARG
108
n
108
ARG
108
A
GLU
109
n
109
GLU
109
A
GLN
110
n
110
GLN
110
A
ARG
111
n
111
ARG
111
A
ARG
112
n
112
ARG
112
A
ALA
113
n
113
ALA
113
A
VAL
114
n
114
VAL
114
A
VAL
115
n
115
VAL
115
A
MET
116
n
116
MET
116
A
ILE
117
n
117
ILE
117
A
SER
118
n
118
SER
118
A
CYS
119
n
119
CYS
119
A
ASN
120
n
120
ASN
120
A
ARG
121
n
121
ARG
121
A
HIS
122
n
122
HIS
122
A
THR
123
n
123
THR
123
A
LEU
124
n
124
LEU
124
A
ALA
125
n
125
ALA
125
A
ASP
126
n
126
ASP
126
A
ASN
127
n
127
ASN
127
A
PHE
128
n
128
PHE
128
A
ASN
129
n
129
ASN
129
A
PRO
130
n
130
PRO
130
A
VAL
131
n
131
VAL
131
A
SER
132
n
132
SER
132
A
GLU
133
n
133
GLU
133
A
GLU
134
n
134
GLU
134
A
ARG
135
n
135
ARG
135
A
GLY
136
n
136
GLY
136
A
LYS
137
n
137
LYS
137
A
VAL
138
n
138
VAL
138
A
GLN
139
n
139
GLN
139
A
ASP
140
n
140
ASP
140
A
CYS
141
n
141
CYS
141
A
PHE
142
n
142
PHE
142
A
TYR
143
n
143
TYR
143
A
LEU
144
n
144
LEU
144
A
PHE
145
n
145
PHE
145
A
GLU
146
n
146
GLU
146
A
MET
147
n
147
MET
147
A
ASP
148
n
148
ASP
148
A
SER
149
n
149
SER
149
A
SER
150
n
150
SER
150
A
LEU
151
n
151
LEU
151
A
ALA
152
n
152
ALA
152
A
CYS
153
n
153
CYS
153
A
SER
154
n
154
SER
154
A
n
1
1
B
n
2
2
B
GLU
3
n
3
GLU
3
B
LYS
4
n
4
LYS
4
B
THR
5
n
5
THR
5
B
CYS
6
n
6
CYS
6
B
ASP
7
n
7
ASP
7
B
LEU
8
n
8
LEU
8
B
VAL
9
n
9
VAL
9
B
GLY
10
n
10
GLY
10
B
GLU
11
n
11
GLU
11
B
LYS
12
n
12
LYS
12
B
GLY
13
n
13
GLY
13
B
LYS
14
n
14
LYS
14
B
GLU
15
n
15
GLU
15
B
SER
16
n
16
SER
16
B
GLU
17
n
17
GLU
17
B
LYS
18
n
18
LYS
18
B
GLU
19
n
19
GLU
19
B
LEU
20
n
20
LEU
20
B
ALA
21
n
21
ALA
21
B
LEU
22
n
22
LEU
22
B
LEU
23
n
23
LEU
23
B
LYS
24
n
24
LYS
24
B
ARG
25
n
25
ARG
25
B
LEU
26
n
26
LEU
26
B
THR
27
n
27
THR
27
B
PRO
28
n
28
PRO
28
B
LEU
29
n
29
LEU
29
B
PHE
30
n
30
PHE
30
B
GLN
31
n
31
GLN
31
B
LYS
32
n
32
LYS
32
B
SER
33
n
33
SER
33
B
PHE
34
n
34
PHE
34
B
GLU
35
n
35
GLU
35
B
SER
36
n
36
SER
36
B
THR
37
n
37
THR
37
B
VAL
38
n
38
VAL
38
B
GLY
39
n
39
GLY
39
B
GLN
40
n
40
GLN
40
B
SER
41
n
41
SER
41
B
PRO
42
n
42
PRO
42
B
ASP
43
n
43
ASP
43
B
MET
44
n
44
MET
44
B
TYR
45
n
45
TYR
45
B
SER
46
n
46
SER
46
B
TYR
47
n
47
TYR
47
B
VAL
48
n
48
VAL
48
B
PHE
49
n
49
PHE
49
B
ARG
50
n
50
ARG
50
B
VAL
51
n
51
VAL
51
B
CYS
52
n
52
CYS
52
B
ARG
53
n
53
ARG
53
B
GLU
54
n
54
GLU
54
B
ALA
55
n
55
ALA
55
B
GLY
56
n
56
GLY
56
B
GLN
57
n
57
GLN
57
B
HIS
58
n
58
HIS
58
B
SER
59
n
59
SER
59
B
SER
60
n
60
SER
60
B
GLY
61
n
61
GLY
61
B
ALA
62
n
62
ALA
62
B
GLY
63
n
63
GLY
63
B
LEU
64
n
64
LEU
64
B
VAL
65
n
65
VAL
65
B
GLN
66
n
66
GLN
66
B
ILE
67
n
67
ILE
67
B
GLN
68
n
68
GLN
68
B
LYS
69
n
69
LYS
69
B
SER
70
n
70
SER
70
B
ASN
71
n
71
ASN
71
B
GLY
72
n
72
GLY
72
B
LYS
73
n
73
LYS
73
B
GLU
74
n
74
GLU
74
B
THR
75
n
75
THR
75
B
VAL
76
n
76
VAL
76
B
VAL
77
n
77
VAL
77
B
GLY
78
n
78
GLY
78
B
ARG
79
n
79
ARG
79
B
PHE
80
n
80
PHE
80
B
ASN
81
n
81
ASN
81
B
GLU
82
n
82
GLU
82
B
THR
83
n
83
THR
83
B
GLN
84
n
84
GLN
84
B
ILE
85
n
85
ILE
85
B
PHE
86
n
86
PHE
86
B
GLN
87
n
87
GLN
87
B
GLY
88
n
88
GLY
88
B
SER
89
n
89
SER
89
B
ASN
90
n
90
ASN
90
B
TRP
91
n
91
TRP
91
B
ILE
92
n
92
ILE
92
B
MET
93
n
93
MET
93
B
LEU
94
n
94
LEU
94
B
ILE
95
n
95
ILE
95
B
TYR
96
n
96
TYR
96
B
LYS
97
n
97
LYS
97
B
GLY
98
n
98
GLY
98
B
GLY
99
n
99
GLY
99
B
ASP
100
n
100
ASP
100
B
GLU
101
n
101
GLU
101
B
TYR
102
n
102
TYR
102
B
ASP
103
n
103
ASP
103
B
ASN
104
n
104
ASN
104
B
HIS
105
n
105
HIS
105
B
CYS
106
n
106
CYS
106
B
GLY
107
n
107
GLY
107
B
ARG
108
n
108
ARG
108
B
GLU
109
n
109
GLU
109
B
GLN
110
n
110
GLN
110
B
ARG
111
n
111
ARG
111
B
ARG
112
n
112
ARG
112
B
ALA
113
n
113
ALA
113
B
VAL
114
n
114
VAL
114
B
VAL
115
n
115
VAL
115
B
MET
116
n
116
MET
116
B
ILE
117
n
117
ILE
117
B
SER
118
n
118
SER
118
B
CYS
119
n
119
CYS
119
B
ASN
120
n
120
ASN
120
B
ARG
121
n
121
ARG
121
B
HIS
122
n
122
HIS
122
B
THR
123
n
123
THR
123
B
LEU
124
n
124
LEU
124
B
ALA
125
n
125
ALA
125
B
ASP
126
n
126
ASP
126
B
ASN
127
n
127
ASN
127
B
PHE
128
n
128
PHE
128
B
ASN
129
n
129
ASN
129
B
PRO
130
n
130
PRO
130
B
VAL
131
n
131
VAL
131
B
SER
132
n
132
SER
132
B
GLU
133
n
133
GLU
133
B
GLU
134
n
134
GLU
134
B
ARG
135
n
135
ARG
135
B
GLY
136
n
136
GLY
136
B
LYS
137
n
137
LYS
137
B
VAL
138
n
138
VAL
138
B
GLN
139
n
139
GLN
139
B
ASP
140
n
140
ASP
140
B
CYS
141
n
141
CYS
141
B
PHE
142
n
142
PHE
142
B
TYR
143
n
143
TYR
143
B
LEU
144
n
144
LEU
144
B
PHE
145
n
145
PHE
145
B
GLU
146
n
146
GLU
146
B
MET
147
n
147
MET
147
B
ASP
148
n
148
ASP
148
B
SER
149
n
149
SER
149
B
SER
150
n
150
SER
150
B
LEU
151
n
151
LEU
151
B
ALA
152
n
152
ALA
152
B
CYS
153
n
153
CYS
153
B
SER
154
n
154
SER
154
B
author_and_software_defined_assembly
PISA
2
dimeric
2010
-0
14940
B
ASN
81
GLYCOSYLATION SITE
B
ASN
81
ASN
A
ASN
81
GLYCOSYLATION SITE
A
ASN
81
ASN
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
PHE
34
A
N
PHE
34
A
O
PHE
49
A
O
PHE
49
A
N
SER
46
A
N
SER
46
A
O
ILE
67
A
O
ILE
67
A
N
GLN
66
A
N
GLN
66
A
O
THR
75
A
O
THR
75
A
N
PHE
86
A
N
PHE
86
A
O
MET
93
A
O
MET
93
A
N
TYR
96
A
N
TYR
96
A
O
ALA
113
A
O
ALA
113
A
N
MET
116
A
N
MET
116
A
O
PHE
145
A
O
PHE
145
A
O
ASP
148
A
O
ASP
148
A
N
ASP
126
A
N
ASP
126
B
N
SER
36
B
N
SER
36
B
O
TYR
47
B
O
TYR
47
B
N
SER
46
B
N
SER
46
B
O
ILE
67
B
O
ILE
67
B
N
GLN
66
B
N
GLN
66
B
O
THR
75
B
O
THR
75
B
N
GLN
84
B
N
GLN
84
B
O
ILE
95
B
O
ILE
95
B
N
TYR
96
B
N
TYR
96
B
O
ALA
113
B
O
ALA
113
B
N
MET
116
B
N
MET
116
B
O
PHE
145
B
O
PHE
145
B
O
ASP
148
B
O
ASP
148
B
N
ASP
126
B
N
ASP
126
1
A
THR
1
A
THR
1
1
Y
1
A
GLU
2
A
GLU
2
1
Y
1
B
THR
1
B
THR
1
1
Y
1
B
GLU
2
B
GLU
2
1
Y
1
A
C1
NAG
201
WRONG HAND
1
B
B
OE1
N
GLU
GLY
54
61
2.09
1
A
LYS
12
-38.40
104.57
1
A
ASP
43
-97.82
36.77
1
A
HIS
58
-95.22
-77.44
1
A
ASN
71
-143.13
12.30
1
A
LYS
97
-103.49
-167.27
1
A
ASN
104
-165.36
-156.19
1
B
GLU
11
-95.19
-131.24
1
B
ASP
43
-93.16
34.02
1
B
ASN
90
-142.52
51.16
1
B
ASP
103
-111.42
55.03
1
B
ALA
125
-172.97
126.32
1
B
ASP
126
-171.84
-178.75
1
B
ARG
135
-161.48
117.83
PROTEIN_REP.PARAM
PROTEIN.TOP
WATER_REP.PARAM
CARBOHYDRATE.TOP
CARBOHYDRATE.PARAM
WATER_REP.TOP
43.2
1.61
0.00
0.00
1.61
0.00
-3.22
0.2483
0.006
0.215
2.20
30.0
1580
19965
18385
8.0
92.2
RANDOM
116851.23
0.000000
1
RESTRAINED
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
FLAT MODEL
71.6488
0.353773
0.38
0.32
5.00
0.58
0.57
2.20
30.0
75
2508
29
0
2404
0.008
1.5
27.7
0.80
2.99
1.50
4.59
2.00
5.31
2.00
7.25
2.50
0.4583
0.043
0.3981
2.28
1208
1519
6
8.9
56.7
10.7
2.2
40.0
1KEO
18385
18385
0.0
0.087
1
6.2
94.9
0.49
2.20
2.24
138
1
70.5
data reduction
DENZO
data scaling
SCALEPACK
phasing
AMoRE
refinement
CNS
1.0
TWISTS AND TURNS OF THE CD-MPR: LIGAND-BOUND VERSUS LIGAND-FREE RECEPTOR
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
A
SER
16
A
SER
16
HELX_P
A
LEU
26
A
LEU
26
1
1
11
A
THR
27
A
THR
27
HELX_P
A
PHE
30
A
PHE
30
5
2
4
A
SER
150
A
SER
150
HELX_P
A
CYS
153
A
CYS
153
5
3
4
B
SER
16
B
SER
16
HELX_P
B
LEU
26
B
LEU
26
1
4
11
B
THR
27
B
THR
27
HELX_P
B
PHE
30
B
PHE
30
5
5
4
B
SER
150
B
SER
150
HELX_P
B
CYS
153
B
CYS
153
5
6
4
disulf
2.032
A
CYS
6
A
SG
CYS
6
1_555
A
CYS
52
A
SG
CYS
52
1_555
disulf
2.026
A
CYS
106
A
SG
CYS
106
1_555
A
CYS
141
A
SG
CYS
141
1_555
disulf
2.029
A
CYS
119
A
SG
CYS
119
1_555
A
CYS
153
A
SG
CYS
153
1_555
disulf
2.033
B
CYS
6
B
SG
CYS
6
1_555
B
CYS
52
B
SG
CYS
52
1_555
disulf
2.035
B
CYS
106
B
SG
CYS
106
1_555
B
CYS
141
B
SG
CYS
141
1_555
disulf
2.035
B
CYS
119
B
SG
CYS
119
1_555
B
CYS
153
B
SG
CYS
153
1_555
covale
1.454
one
N-Glycosylation
A
ASN
81
A
ND2
ASN
81
1_555
A
NAG
201
C
C1
NAG
1_555
covale
1.461
one
N-Glycosylation
B
ASN
81
B
ND2
ASN
81
1_555
B
NAG
201
D
C1
NAG
1_555
SUGAR BINDING PROTEIN
p lectin, receptor, mannose 6-phosphate, SUGAR BINDING PROTEIN
A
SER
41
A
SER
41
1
A
PRO
42
A
PRO
42
4.11
B
SER
41
B
SER
41
1
B
PRO
42
B
PRO
42
0.66
MPRD_BOVIN
UNP
1
29
P11456
TEEKTCDLVGEKGKESEKELALLKRLTPLFNKSFESTVGQSPDMYSYVFRVCREAGNHSSGAGLVQINKSNGKETVVGRF
NETQIFNGSNWIMLIYKGGDEYDNHCGREQRRAVVMISCNRHTLADNFNPVSEERGKVQDCFYLFEMDSSLACS
29
182
1KEO
1
154
P11456
A
1
1
154
29
182
1KEO
1
154
P11456
B
1
1
154
1
ASN
engineered mutation
GLN
31
1KEO
A
P11456
UNP
59
31
1
ASN
engineered mutation
GLN
57
1KEO
A
P11456
UNP
85
57
1
ASN
engineered mutation
GLN
68
1KEO
A
P11456
UNP
96
68
1
ASN
engineered mutation
GLN
87
1KEO
A
P11456
UNP
115
87
2
ASN
engineered mutation
GLN
31
1KEO
B
P11456
UNP
59
31
2
ASN
engineered mutation
GLN
57
1KEO
B
P11456
UNP
85
57
2
ASN
engineered mutation
GLN
68
1KEO
B
P11456
UNP
96
68
2
ASN
engineered mutation
GLN
87
1KEO
B
P11456
UNP
115
87
8
8
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
A
PHE
34
A
PHE
34
A
VAL
38
A
VAL
38
A
TYR
45
A
TYR
45
A
PHE
49
A
PHE
49
A
ALA
62
A
ALA
62
A
GLN
68
A
GLN
68
A
GLU
74
A
GLU
74
A
GLN
87
A
GLN
87
A
TRP
91
A
TRP
91
A
GLU
101
A
GLU
101
A
GLN
110
A
GLN
110
A
CYS
119
A
CYS
119
A
VAL
138
A
VAL
138
A
SER
149
A
SER
149
A
ASP
126
A
ASP
126
A
ARG
135
A
ARG
135
B
PHE
34
B
PHE
34
B
VAL
38
B
VAL
38
B
TYR
45
B
TYR
45
B
PHE
49
B
PHE
49
B
ALA
62
B
ALA
62
B
GLN
68
B
GLN
68
B
GLU
74
B
GLU
74
B
GLY
88
B
GLY
88
B
TRP
91
B
TRP
91
B
LYS
97
B
LYS
97
B
ALA
113
B
ALA
113
B
CYS
119
B
CYS
119
B
VAL
138
B
VAL
138
B
SER
149
B
SER
149
B
ASP
126
B
ASP
126
B
ARG
135
B
ARG
135
79
I 4