0.00 1.195 0.434 2.038 A C1 G6S 1 HETATM A C1 G6S 1 1.00 1 C 0.00 1.152 -0.273 3.386 A C2 G6S 1 HETATM A C2 G6S 1 1.00 1 C 0.00 1.658 0.647 4.487 A C3 G6S 1 HETATM A C3 G6S 1 1.00 1 C 0.00 3.032 1.196 4.125 A C4 G6S 1 HETATM A C4 G6S 1 1.00 1 C 0.00 2.999 1.820 2.734 A C5 G6S 1 HETATM A C5 G6S 1 1.00 1 C 0.00 4.363 2.283 2.268 A C6 G6S 1 HETATM A C6 G6S 1 1.00 1 C 0.00 0.850 -0.481 1.052 A O1 G6S 1 HETATM A O1 G6S 1 1.00 1 O 0.00 -0.181 -0.694 3.653 A O2 G6S 1 HETATM A O2 G6S 1 1.00 1 O 0.00 4.004 0.149 4.131 A O4 G6S 1 HETATM A O4 G6S 1 1.00 1 O 0.00 2.532 0.862 1.772 A O5 G6S 1 HETATM A O5 G6S 1 1.00 1 O 0.00 4.305 2.887 0.977 A O6 G6S 1 HETATM A O6 G6S 1 1.00 1 O 0.00 5.696 3.414 0.386 A S G6S 1 HETATM A S G6S 1 1.00 1 S 0.00 6.623 2.305 0.270 A O7 G6S 1 HETATM A O7 G6S 1 1.00 1 O 0.00 6.251 4.416 1.275 A O8 G6S 1 HETATM A O8 G6S 1 1.00 1 O 0.00 5.476 3.998 -0.923 A O9 G6S 1 HETATM A O9 G6S 1 1.00 1 O 0.00 1.737 -0.075 5.717 A O3 G6S 1 HETATM A O3 G6S 1 1.00 1 O 0.00 0.862 0.315 6.723 A C1 NGS 2 HETATM A C1 NGS 1 1.00 1 C 0.00 0.013 -0.888 7.115 A C2 NGS 2 HETATM A C2 NGS 1 1.00 1 C 0.00 -0.864 -0.553 8.312 A C3 NGS 2 HETATM A C3 NGS 1 1.00 1 C 0.00 -0.016 0.000 9.450 A C4 NGS 2 HETATM A C4 NGS 1 1.00 1 C 0.00 0.849 1.151 8.950 A C5 NGS 2 HETATM A C5 NGS 1 1.00 1 C 0.00 1.799 1.670 10.008 A C6 NGS 2 HETATM A C6 NGS 1 1.00 1 C 0.00 -1.548 -1.729 8.748 A O3 NGS 2 HETATM A O3 NGS 1 1.00 1 O 0.00 1.654 0.720 7.841 A O5 NGS 2 HETATM A O5 NGS 1 1.00 1 O 0.00 2.581 2.764 9.528 A O6 NGS 2 HETATM A O6 NGS 1 1.00 1 O 0.00 -0.812 -1.302 5.959 A N2 NGS 2 HETATM A N2 NGS 1 1.00 1 N 0.00 -0.629 -2.562 5.426 A C7 NGS 2 HETATM A C7 NGS 1 1.00 1 C 0.00 0.183 -3.364 5.858 A O7 NGS 2 HETATM A O7 NGS 1 1.00 1 O 0.00 -1.535 -2.850 4.253 A C8 NGS 2 HETATM A C8 NGS 1 1.00 1 C 0.00 4.038 2.920 10.170 A S NGS 2 HETATM A S NGS 1 1.00 1 S 0.00 4.814 1.724 9.905 A O7A NGS 2 HETATM A O7A NGS 1 1.00 1 O 0.00 3.918 3.109 11.603 A O8 NGS 2 HETATM A O8 NGS 1 1.00 1 O 0.00 4.704 4.067 9.585 A O9 NGS 2 HETATM A O9 NGS 1 1.00 1 O 0.00 -0.850 0.481 10.502 A O4 NGS 2 HETATM A O4 NGS 1 1.00 1 O 0.00 -1.195 -0.434 11.488 A C1 G6S 3 HETATM A C1 G6S 1 1.00 1 C 0.00 -1.152 0.273 12.836 A C2 G6S 3 HETATM A C2 G6S 1 1.00 1 C 0.00 -1.658 -0.647 13.937 A C3 G6S 3 HETATM A C3 G6S 1 1.00 1 C 0.00 -3.032 -1.196 13.575 A C4 G6S 3 HETATM A C4 G6S 1 1.00 1 C 0.00 -2.999 -1.820 12.184 A C5 G6S 3 HETATM A C5 G6S 1 1.00 1 C 0.00 -4.363 -2.283 11.718 A C6 G6S 3 HETATM A C6 G6S 1 1.00 1 C 0.00 0.181 0.694 13.103 A O2 G6S 3 HETATM A O2 G6S 1 1.00 1 O 0.00 -4.004 -0.149 13.581 A O4 G6S 3 HETATM A O4 G6S 1 1.00 1 O 0.00 -2.532 -0.862 11.222 A O5 G6S 3 HETATM A O5 G6S 1 1.00 1 O 0.00 -4.305 -2.887 10.427 A O6 G6S 3 HETATM A O6 G6S 1 1.00 1 O 0.00 -5.696 -3.414 9.836 A S G6S 3 HETATM A S G6S 1 1.00 1 S 0.00 -6.623 -2.305 9.720 A O7 G6S 3 HETATM A O7 G6S 1 1.00 1 O 0.00 -6.251 -4.416 10.725 A O8 G6S 3 HETATM A O8 G6S 1 1.00 1 O 0.00 -5.476 -3.998 8.527 A O9 G6S 3 HETATM A O9 G6S 1 1.00 1 O 0.00 -1.737 0.075 15.167 A O3 G6S 3 HETATM A O3 G6S 1 1.00 1 O 0.00 -0.862 -0.315 16.173 A C1 NGS 4 HETATM A C1 NGS 1 1.00 1 C 0.00 -0.013 0.888 16.565 A C2 NGS 4 HETATM A C2 NGS 1 1.00 1 C 0.00 0.864 0.553 17.762 A C3 NGS 4 HETATM A C3 NGS 1 1.00 1 C 0.00 0.016 0.000 18.900 A C4 NGS 4 HETATM A C4 NGS 1 1.00 1 C 0.00 -0.849 -1.151 18.400 A C5 NGS 4 HETATM A C5 NGS 1 1.00 1 C 0.00 -1.799 -1.670 19.458 A C6 NGS 4 HETATM A C6 NGS 1 1.00 1 C 0.00 1.548 1.729 18.198 A O3 NGS 4 HETATM A O3 NGS 1 1.00 1 O 0.00 -1.654 -0.720 17.291 A O5 NGS 4 HETATM A O5 NGS 1 1.00 1 O 0.00 -2.581 -2.764 18.978 A O6 NGS 4 HETATM A O6 NGS 1 1.00 1 O 0.00 0.812 1.302 15.409 A N2 NGS 4 HETATM A N2 NGS 1 1.00 1 N 0.00 0.629 2.562 14.876 A C7 NGS 4 HETATM A C7 NGS 1 1.00 1 C 0.00 -0.183 3.364 15.308 A O7 NGS 4 HETATM A O7 NGS 1 1.00 1 O 0.00 1.535 2.850 13.703 A C8 NGS 4 HETATM A C8 NGS 1 1.00 1 C 0.00 -4.038 -2.920 19.620 A S NGS 4 HETATM A S NGS 1 1.00 1 S 0.00 -4.814 -1.724 19.355 A O7A NGS 4 HETATM A O7A NGS 1 1.00 1 O 0.00 -3.918 -3.109 21.053 A O8 NGS 4 HETATM A O8 NGS 1 1.00 1 O 0.00 -4.704 -4.067 19.035 A O9 NGS 4 HETATM A O9 NGS 1 1.00 1 O 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Arnott, S. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C6 H12 O9 S 260.219 n 6-O-sulfo-beta-D-galactopyranose D-GALACTOSE-6-SULFATE; 6-O-sulfo-beta-D-galactose; 6-O-sulfo-D-galactose; 6-O-sulfo-galactose D-saccharide, beta linking C8 H15 N O9 S 301.271 n 2-acetamido-2-deoxy-6-O-sulfo-beta-D-glucopyranose 2-(acetylamino)-2-deoxy-6-O-sulfo-beta-D-glucopyranose; N-ACETYL-D-GLUCOSAMINE-6-SULFATE; N-acetyl-6-O-sulfo-beta-D-glucosamine; 2-acetamido-2-deoxy-6-O-sulfo-beta-D-glucose; 2-acetamido-2-deoxy-6-O-sulfo-D-glucose; 2-acetamido-2-deoxy-6-O-sulfo-glucose D-saccharide, beta linking N 1 R C N 2 R C N 3 S C N 4 R C N 5 R C N 6 N C N 7 N O N 8 N O N 9 N O N 10 N O N 11 N O N 12 N S N 13 N O N 14 N O N 15 N O N 16 N O N 17 N H N 18 N H N 19 N H N 20 N H N 21 N H N 22 N H N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 R C N 30 R C N 31 R C N 32 S C N 33 R C N 34 N C N 35 N O N 36 N O N 37 N O N 38 N O N 39 N N N 40 N C N 41 N O N 42 N C N 43 N S N 44 N O N 45 N O N 46 N O N 47 N O N 48 N H N 49 N H N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N doub N 15 N doub N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N doub N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N doub N 58 N sing N 59 N doub N 60 N sing N 61 N sing N 62 N sing UK J.Mol.Biol. JMOBAK 0070 0022-2836 88 175 184 10.1016/0022-2836(74)90303-9 4280446 Conformation of keratan sulphate. 1974 UK J.Chem.Soc.,Perkin Trans.2 JCPKBH 0188 0300-9580 324 Accurate X-Ray Diffraction Analysis of Fibrous Polysaccharides Containing Pyranose Rings. Part 1 the Linked-Atom Approach. 1972 10.2210/pdb1kes/pdb pdb_00001kes .100000 0.000000 0.000000 0.000000 .100000 0.000000 0.000000 0.000000 .100000 0.00000 0.00000 0.00000 0.00000 0.00000 18.90000 1068.934 2-acetamido-2-deoxy-6-O-sulfo-beta-D-glucopyranose-(1-3)-6-O-sulfo-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-6-O-sulfo-beta-D-glucopyranose-(1-3)-6-O-sulfo-beta-D-galactopyranose 1 man branched atom_site chem_comp entity pdbx_branch_scheme pdbx_chem_comp_identifier pdbx_database_status pdbx_entity_branch pdbx_entity_branch_descriptor pdbx_entity_branch_link pdbx_entity_branch_list pdbx_entity_nonpoly pdbx_nonpoly_scheme pdbx_struct_assembly pdbx_struct_oper_list struct_asym struct_conn struct_ref struct_ref_seq chem_comp chem_comp_atom chem_comp_bond database_2 repository Initial release Carbohydrate remediation repository Remediation Version format compliance Version format compliance Atomic model Data collection Database references Derived calculations Other Structure summary Data collection Database references Structure summary 1 0 1980-03-28 1 1 2008-03-21 1 2 2011-07-13 2 0 2020-07-29 2 1 2024-02-07 _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.label_asym_id _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_entity_id _atom_site.type_symbol _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.type _pdbx_database_status.process_site _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_value_order _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _chem_comp.pdbx_synonyms _database_2.pdbx_DOI _database_2.pdbx_database_accession GLS 1 n A G6S 1 NGS 2 n A NGS 2 GLS 3 n A G6S 3 NGS 4 n A NGS 4 DGalp[6S]b 6-sulfo-b-D-galactopyranose b-D-Galp6SO3 DGlcpNAc[6S]b N-acetyl-6-sulfo-b-D-glucopyranose b-D-GlcpNAc6SO3 Y BNL 1978-05-23 REL oligosaccharide DGlcpNAc[6S]b1-3DGalp[6S]b1-4DGlcpNAc[6S]b1-3DGalp[6S]b1-ROH 1 GMML 1.0 Glycam Condensed Sequence WURCS=2.0/2,4,3/[a2112h-1b_1-5_6*OSO/3=O/3=O][a2122h-1b_1-5_2*NCC/3=O_6*OSO/3=O/3=O]/1-2-1-2/a3-b1_b4-c1_c3-d1 1 PDB2Glycan 1.1.0 WURCS [][b-D-Galp6SO3]{[(3+1)][b-D-GlcpNAc6SO3]{[(4+1)][b-D-Galp6SO3]{[(3+1)][b-D-4-deoxy-GlcpNAc6SO3]{}}}} 1 PDB-CARE LINUCS C1 O3 NGS G6S 2 1 1 O1 HO3 sing C1 O4 G6S NGS 3 2 1 O1 HO4 sing C1 O3 NGS G6S 4 3 1 O1 HO3 sing n n n n author_defined_assembly 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A O4 NGS 4 A O4 NGS 4 1 N 3.0 1 3.0 0 66 66 0 0 refinement LINKED-ATOM LEAST-SQUARES MODEL-BUILDING PROCEDURE refinement LALS CONFORMATION OF KERATAN SULPHATE 1 N N THE FOUR-RESIDUE CHAIN SEGMENT GIVEN HERE WAS GENERATED FROM THE PUBLISHED TWO-RESIDUE SEGMENT BY APPLICATION OF THE TWO-FOLD SCREW AXIS PARALLEL TO Z AND PASSING THROUGH X=0,Y=0. covale 1.389 both sing A G6S 1 A O3 G6S 1_555 A NGS 2 A C1 NGS 1_555 covale 1.389 both sing A NGS 2 A O4 NGS 1_555 A G6S 3 A C1 G6S 1_555 covale 1.389 both sing A G6S 3 A O3 G6S 1_555 A NGS 4 A C1 NGS 1_555 TEXTURE OF CONNECTIVE TISSUE TEXTURE OF CONNECTIVE TISSUE 1 P 1