0.027322
0.000000
0.001863
0.000000
0.009066
0.000000
0.000000
0.000000
0.020882
0.00000
0.00000
0.00000
Kovari, Z.
Flachner, B.
Naray-Szabo, G.
Vas, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90
93.9
90
36.6
110.3
48.0
C3 H7 O7 P
186.057
3-PHOSPHOGLYCERIC ACID
non-polymer
C11 H18 N5 O12 P3
505.208
PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
ADENOSINE-5'-[BETA, GAMMA-METHYLENE]TRIPHOSPHATE
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
C
N
2
N
O
N
3
N
O
N
4
R
C
N
5
N
O
N
6
N
C
N
7
N
O
N
8
N
P
N
9
N
O
N
10
N
O
N
11
N
O
N
12
N
H
N
13
N
H
N
14
N
H
N
15
N
H
N
16
N
H
N
17
N
H
N
18
N
H
N
19
N
P
N
20
N
O
N
21
N
O
N
22
N
O
N
23
S
P
N
24
N
O
N
25
N
O
N
26
N
C
N
27
R
P
N
28
N
O
N
29
N
O
N
30
N
O
N
31
N
O
N
32
N
C
N
33
R
C
N
34
N
O
N
35
S
C
N
36
N
O
N
37
R
C
N
38
N
O
N
39
R
C
Y
40
N
N
Y
41
N
C
Y
42
N
N
Y
43
N
C
Y
44
N
C
N
45
N
N
Y
46
N
N
Y
47
N
C
Y
48
N
N
Y
49
N
C
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
N
N
69
S
C
N
70
N
C
N
71
N
O
N
72
N
C
N
73
N
O
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
N
N
82
S
C
N
83
N
C
N
84
N
O
N
85
N
C
N
86
N
C
N
87
N
C
N
88
N
N
N
89
N
C
N
90
N
N
N
91
N
N
N
92
N
O
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
O
N
115
N
N
N
116
N
O
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
N
N
126
S
C
N
127
N
C
N
128
N
O
N
129
N
C
N
130
N
C
N
131
N
O
N
132
N
O
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
N
N
142
R
C
N
143
N
C
N
144
N
O
N
145
N
C
N
146
N
S
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
N
N
156
S
C
N
157
N
C
N
158
N
O
N
159
N
C
N
160
N
C
N
161
N
C
N
162
N
O
N
163
N
N
N
164
N
O
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
N
N
176
S
C
N
177
N
C
N
178
N
O
N
179
N
C
N
180
N
C
N
181
N
C
N
182
N
O
N
183
N
O
N
184
N
O
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
N
N
195
N
C
N
196
N
C
N
197
N
O
N
198
N
O
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
N
N
205
S
C
N
206
N
C
N
207
N
O
N
208
N
C
Y
209
N
C
Y
210
N
N
Y
211
N
C
Y
212
N
C
Y
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
O
N
226
N
H
N
227
N
H
N
228
N
N
N
229
S
C
N
230
N
C
N
231
N
O
N
232
S
C
N
233
N
C
N
234
N
C
N
235
N
C
N
236
N
O
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
N
255
N
C
N
256
N
C
N
257
N
C
N
258
N
O
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
N
N
273
S
C
N
274
N
C
N
275
N
O
N
276
N
C
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
N
N
281
N
O
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
N
N
298
S
C
N
299
N
C
N
300
N
O
N
301
N
C
N
302
N
C
N
303
N
S
N
304
N
C
N
305
N
O
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
MG
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
N
C
Y
323
N
C
Y
324
N
C
Y
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
N
329
N
O
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
N
N
342
S
C
N
343
N
C
N
344
N
O
N
345
N
C
N
346
N
C
N
347
N
C
N
348
N
O
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
N
N
359
S
C
N
360
N
C
N
361
N
O
N
362
N
C
N
363
N
O
N
364
N
O
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
R
C
N
377
N
O
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
N
N
390
S
C
N
391
N
C
N
392
N
O
N
393
N
C
Y
394
N
C
Y
395
N
C
Y
396
N
C
Y
397
N
N
Y
398
N
C
Y
399
N
C
Y
400
N
C
Y
401
N
C
Y
402
N
C
N
403
N
O
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
N
N
417
S
C
N
418
N
C
N
419
N
O
N
420
N
C
Y
421
N
C
Y
422
N
C
Y
423
N
C
Y
424
N
C
Y
425
N
C
Y
426
N
C
N
427
N
O
N
428
N
O
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
N
N
441
S
C
N
442
N
C
N
443
N
O
N
444
N
C
N
445
N
C
N
446
N
C
N
447
N
O
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
doub
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
doub
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
doub
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
doub
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
Y
54
N
sing
Y
55
N
sing
Y
56
N
doub
N
57
N
sing
Y
58
N
sing
Y
59
N
sing
Y
60
N
doub
N
61
N
sing
Y
62
N
doub
N
63
N
sing
N
64
N
sing
Y
65
N
sing
Y
66
N
doub
N
67
N
sing
Y
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
doub
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
doub
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
doub
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
doub
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
doub
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
doub
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
doub
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
doub
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
doub
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
doub
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
doub
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
doub
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
Y
208
N
sing
Y
209
N
doub
Y
210
N
doub
N
211
N
sing
Y
212
N
sing
N
213
N
sing
Y
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
doub
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
doub
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
doub
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
doub
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
doub
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
Y
316
N
doub
Y
317
N
sing
Y
318
N
sing
N
319
N
sing
Y
320
N
doub
N
321
N
sing
Y
322
N
doub
N
323
N
sing
Y
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
doub
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
doub
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
doub
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
Y
385
N
doub
Y
386
N
sing
Y
387
N
sing
N
388
N
sing
Y
389
N
doub
Y
390
N
sing
Y
391
N
sing
N
392
N
sing
Y
393
N
sing
Y
394
N
doub
N
395
N
sing
Y
396
N
doub
N
397
N
sing
Y
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
doub
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
Y
413
N
doub
Y
414
N
sing
Y
415
N
sing
N
416
N
sing
Y
417
N
doub
N
418
N
sing
Y
419
N
doub
N
420
N
sing
Y
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
doub
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
41
8796
8806
10.1021/bi020210j
12102622
Crystallographic and thiol-reactivity studies on the complex of pig muscle phosphoglycerate kinase with ATP analogues: correlation between nucleotide binding mode and helix flexibility.
2002
10.2210/pdb1kf0/pdb
pdb_00001kf0
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
297
1
IMAGE PLATE
1996-04-03
MARRESEARCH
graphite
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
44526.453
Phosphoglycerate Kinase
2.7.2.3
1
nat
polymer
24.305
MAGNESIUM ION
1
syn
non-polymer
186.057
3-PHOSPHOGLYCERIC ACID
1
syn
non-polymer
505.208
PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
1
syn
non-polymer
18.015
water
81
nat
water
no
no
SLSNKLTLDKLNVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDDGAKSVVLMSHLGRPDGSPMPDKYSLQPV
AVELKSLLGKDVLFLKDCVGPEVEKACADPAAGSVILLENLRFHVEEEGKGKDASGNKVKAEPAKIKTFRASLSKLGDVY
VNDAFGTAHRAHSSMVGVNLPKKAGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMA
FTFLKVLNNMEIGTSLFDEEGAKIVKNLMSKAEKNGVKITLPVDFVTADKFDEHAKTGQATVASGIPAGWMGLDCGPESS
KKYSEAVARAKQIVWNGPVGVFEWEAFAQGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLE
LLEGKVLPGVDALSNV
SLSNKLTLDKLNVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDDGAKSVVLMSHLGRPDGSPMPDKYSLQPV
AVELKSLLGKDVLFLKDCVGPEVEKACADPAAGSVILLENLRFHVEEEGKGKDASGNKVKAEPAKIKTFRASLSKLGDVY
VNDAFGTAHRAHSSMVGVNLPKKAGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMA
FTFLKVLNNMEIGTSLFDEEGAKIVKNLMSKAEKNGVKITLPVDFVTADKFDEHAKTGQATVASGIPAGWMGLDCGPESS
KKYSEAVARAKQIVWNGPVGVFEWEAFAQGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLE
LLEGKVLPGVDALSNV
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
pig
muscle
Sus
sample
9823
Sus scrofa
1
2.17
43.32
VAPOR DIFFUSION, HANGING DROP
7.0
magnesium chloride, PEG 8000, PH 7.0, 288K, VAPOR DIFFUSION, HANGING DROP
288
chem_comp_atom
chem_comp_bond
database_2
pdbx_struct_conn_angle
struct_conn
struct_site
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Refinement description
1
0
2002-07-24
1
1
2008-04-27
1
2
2011-07-13
1
3
2024-02-07
1
4
2024-04-03
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
SEQUENCE
SEQUENCE AUTHOR REMARK STATES THAT THE PIG PHOSPHOGLYCERATE
KINASE (PGK) HAS NOT YET BEEN SEQUENCED. THEREFORE THE
SEQUENCE OF THE STRUCTURE IS BASED ON THE SEQUENCE OF THE
HORSE MUSCLE PGK AND ON THE INTERPRETATION OF THE ELECTRON
DENSITY MAPS.
RCSB
Y
RCSB
2001-11-19
REL
REL
MG
MAGNESIUM ION
3PG
3-PHOSPHOGLYCERIC ACID
ACP
PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
HOH
water
pig muscle PGK ternary complex with MnAMP-PNP and 3-PG May et al., Proteins, 24:292-303, 1996)
Other
experimental model
MG
518
2
MG
MG
518
A
MP3
417
3
3PG
3PG
417
A
ACP
418
4
ACP
ACP
418
A
HOH
419
5
HOH
HOH
419
A
HOH
420
5
HOH
HOH
420
A
HOH
421
5
HOH
HOH
421
A
HOH
422
5
HOH
HOH
422
A
HOH
423
5
HOH
HOH
423
A
HOH
424
5
HOH
HOH
424
A
HOH
425
5
HOH
HOH
425
A
HOH
426
5
HOH
HOH
426
A
HOH
427
5
HOH
HOH
427
A
HOH
428
5
HOH
HOH
428
A
HOH
429
5
HOH
HOH
429
A
HOH
430
5
HOH
HOH
430
A
HOH
431
5
HOH
HOH
431
A
HOH
432
5
HOH
HOH
432
A
HOH
433
5
HOH
HOH
433
A
HOH
435
5
HOH
HOH
435
A
HOH
436
5
HOH
HOH
436
A
HOH
438
5
HOH
HOH
438
A
HOH
439
5
HOH
HOH
439
A
HOH
440
5
HOH
HOH
440
A
HOH
441
5
HOH
HOH
441
A
HOH
442
5
HOH
HOH
442
A
HOH
443
5
HOH
HOH
443
A
HOH
444
5
HOH
HOH
444
A
HOH
445
5
HOH
HOH
445
A
HOH
446
5
HOH
HOH
446
A
HOH
447
5
HOH
HOH
447
A
HOH
448
5
HOH
HOH
448
A
HOH
449
5
HOH
HOH
449
A
HOH
450
5
HOH
HOH
450
A
HOH
451
5
HOH
HOH
451
A
HOH
452
5
HOH
HOH
452
A
HOH
453
5
HOH
HOH
453
A
HOH
454
5
HOH
HOH
454
A
HOH
455
5
HOH
HOH
455
A
HOH
456
5
HOH
HOH
456
A
HOH
457
5
HOH
HOH
457
A
HOH
458
5
HOH
HOH
458
A
HOH
459
5
HOH
HOH
459
A
HOH
460
5
HOH
HOH
460
A
HOH
461
5
HOH
HOH
461
A
HOH
462
5
HOH
HOH
462
A
HOH
463
5
HOH
HOH
463
A
HOH
464
5
HOH
HOH
464
A
HOH
465
5
HOH
HOH
465
A
HOH
466
5
HOH
HOH
466
A
HOH
467
5
HOH
HOH
467
A
HOH
468
5
HOH
HOH
468
A
HOH
469
5
HOH
HOH
469
A
HOH
470
5
HOH
HOH
470
A
HOH
471
5
HOH
HOH
471
A
HOH
472
5
HOH
HOH
472
A
HOH
473
5
HOH
HOH
473
A
HOH
474
5
HOH
HOH
474
A
HOH
475
5
HOH
HOH
475
A
HOH
476
5
HOH
HOH
476
A
HOH
477
5
HOH
HOH
477
A
HOH
478
5
HOH
HOH
478
A
HOH
480
5
HOH
HOH
480
A
HOH
481
5
HOH
HOH
481
A
HOH
482
5
HOH
HOH
482
A
HOH
483
5
HOH
HOH
483
A
HOH
484
5
HOH
HOH
484
A
HOH
485
5
HOH
HOH
485
A
HOH
486
5
HOH
HOH
486
A
HOH
487
5
HOH
HOH
487
A
HOH
488
5
HOH
HOH
488
A
HOH
489
5
HOH
HOH
489
A
HOH
490
5
HOH
HOH
490
A
HOH
491
5
HOH
HOH
491
A
HOH
493
5
HOH
HOH
493
A
HOH
494
5
HOH
HOH
494
A
HOH
495
5
HOH
HOH
495
A
HOH
496
5
HOH
HOH
496
A
HOH
500
5
HOH
HOH
500
A
HOH
501
5
HOH
HOH
501
A
HOH
502
5
HOH
HOH
502
A
HOH
503
5
HOH
HOH
503
A
HOH
504
5
HOH
HOH
504
A
HOH
505
5
HOH
HOH
505
A
HOH
506
5
HOH
HOH
506
A
SER
1
n
1
SER
1
A
LEU
2
n
2
LEU
2
A
SER
3
n
3
SER
3
A
ASN
4
n
4
ASN
4
A
LYS
5
n
5
LYS
5
A
LEU
6
n
6
LEU
6
A
THR
7
n
7
THR
7
A
LEU
8
n
8
LEU
8
A
ASP
9
n
9
ASP
9
A
LYS
10
n
10
LYS
10
A
LEU
11
n
11
LEU
11
A
ASN
12
n
12
ASN
12
A
VAL
13
n
13
VAL
13
A
LYS
14
n
14
LYS
14
A
GLY
15
n
15
GLY
15
A
LYS
16
n
16
LYS
16
A
ARG
17
n
17
ARG
17
A
VAL
18
n
18
VAL
18
A
VAL
19
n
19
VAL
19
A
MET
20
n
20
MET
20
A
ARG
21
n
21
ARG
21
A
VAL
22
n
22
VAL
22
A
ASP
23
n
23
ASP
23
A
PHE
24
n
24
PHE
24
A
ASN
25
n
25
ASN
25
A
VAL
26
n
26
VAL
26
A
PRO
27
n
27
PRO
27
A
MET
28
n
28
MET
28
A
LYS
29
n
29
LYS
29
A
ASN
30
n
30
ASN
30
A
ASN
31
n
31
ASN
31
A
GLN
32
n
32
GLN
32
A
ILE
33
n
33
ILE
33
A
THR
34
n
34
THR
34
A
ASN
35
n
35
ASN
35
A
ASN
36
n
36
ASN
36
A
GLN
37
n
37
GLN
37
A
ARG
38
n
38
ARG
38
A
ILE
39
n
39
ILE
39
A
LYS
40
n
40
LYS
40
A
ALA
41
n
41
ALA
41
A
ALA
42
n
42
ALA
42
A
VAL
43
n
43
VAL
43
A
PRO
44
n
44
PRO
44
A
SER
45
n
45
SER
45
A
ILE
46
n
46
ILE
46
A
LYS
47
n
47
LYS
47
A
PHE
48
n
48
PHE
48
A
CYS
49
n
49
CYS
49
A
LEU
50
n
50
LEU
50
A
ASP
51
n
51
ASP
51
A
ASP
52
n
52
ASP
52
A
GLY
53
n
53
GLY
53
A
ALA
54
n
54
ALA
54
A
LYS
55
n
55
LYS
55
A
SER
56
n
56
SER
56
A
VAL
57
n
57
VAL
57
A
VAL
58
n
58
VAL
58
A
LEU
59
n
59
LEU
59
A
MET
60
n
60
MET
60
A
SER
61
n
61
SER
61
A
HIS
62
n
62
HIS
62
A
LEU
63
n
63
LEU
63
A
GLY
64
n
64
GLY
64
A
ARG
65
n
65
ARG
65
A
PRO
66
n
66
PRO
66
A
ASP
67
n
67
ASP
67
A
GLY
68
n
68
GLY
68
A
SER
69
n
69
SER
69
A
PRO
70
n
70
PRO
70
A
MET
71
n
71
MET
71
A
PRO
72
n
72
PRO
72
A
ASP
73
n
73
ASP
73
A
LYS
74
n
74
LYS
74
A
TYR
75
n
75
TYR
75
A
SER
76
n
76
SER
76
A
LEU
77
n
77
LEU
77
A
GLN
78
n
78
GLN
78
A
PRO
79
n
79
PRO
79
A
VAL
80
n
80
VAL
80
A
ALA
81
n
81
ALA
81
A
VAL
82
n
82
VAL
82
A
GLU
83
n
83
GLU
83
A
LEU
84
n
84
LEU
84
A
LYS
85
n
85
LYS
85
A
SER
86
n
86
SER
86
A
LEU
87
n
87
LEU
87
A
LEU
88
n
88
LEU
88
A
GLY
89
n
89
GLY
89
A
LYS
90
n
90
LYS
90
A
ASP
91
n
91
ASP
91
A
VAL
92
n
92
VAL
92
A
LEU
93
n
93
LEU
93
A
PHE
94
n
94
PHE
94
A
LEU
95
n
95
LEU
95
A
LYS
96
n
96
LYS
96
A
ASP
97
n
97
ASP
97
A
CYS
98
n
98
CYS
98
A
VAL
99
n
99
VAL
99
A
GLY
100
n
100
GLY
100
A
PRO
101
n
101
PRO
101
A
GLU
102
n
102
GLU
102
A
VAL
103
n
103
VAL
103
A
GLU
104
n
104
GLU
104
A
LYS
105
n
105
LYS
105
A
ALA
106
n
106
ALA
106
A
CYS
107
n
107
CYS
107
A
ALA
108
n
108
ALA
108
A
ASP
109
n
109
ASP
109
A
PRO
110
n
110
PRO
110
A
ALA
111
n
111
ALA
111
A
ALA
112
n
112
ALA
112
A
GLY
113
n
113
GLY
113
A
SER
114
n
114
SER
114
A
VAL
115
n
115
VAL
115
A
ILE
116
n
116
ILE
116
A
LEU
117
n
117
LEU
117
A
LEU
118
n
118
LEU
118
A
GLU
119
n
119
GLU
119
A
ASN
120
n
120
ASN
120
A
LEU
121
n
121
LEU
121
A
ARG
122
n
122
ARG
122
A
PHE
123
n
123
PHE
123
A
HIS
124
n
124
HIS
124
A
VAL
125
n
125
VAL
125
A
GLU
126
n
126
GLU
126
A
GLU
127
n
127
GLU
127
A
GLU
128
n
128
GLU
128
A
GLY
129
n
129
GLY
129
A
LYS
130
n
130
LYS
130
A
GLY
131
n
131
GLY
131
A
LYS
132
n
132
LYS
132
A
ASP
133
n
133
ASP
133
A
ALA
134
n
134
ALA
134
A
SER
135
n
135
SER
135
A
GLY
136
n
136
GLY
136
A
ASN
137
n
137
ASN
137
A
LYS
138
n
138
LYS
138
A
VAL
139
n
139
VAL
139
A
LYS
140
n
140
LYS
140
A
ALA
141
n
141
ALA
141
A
GLU
142
n
142
GLU
142
A
PRO
143
n
143
PRO
143
A
ALA
144
n
144
ALA
144
A
LYS
145
n
145
LYS
145
A
ILE
146
n
146
ILE
146
A
LYS
147
n
147
LYS
147
A
THR
148
n
148
THR
148
A
PHE
149
n
149
PHE
149
A
ARG
150
n
150
ARG
150
A
ALA
151
n
151
ALA
151
A
SER
152
n
152
SER
152
A
LEU
153
n
153
LEU
153
A
SER
154
n
154
SER
154
A
LYS
155
n
155
LYS
155
A
LEU
156
n
156
LEU
156
A
GLY
157
n
157
GLY
157
A
ASP
158
n
158
ASP
158
A
VAL
159
n
159
VAL
159
A
TYR
160
n
160
TYR
160
A
VAL
161
n
161
VAL
161
A
ASN
162
n
162
ASN
162
A
ASP
163
n
163
ASP
163
A
ALA
164
n
164
ALA
164
A
PHE
165
n
165
PHE
165
A
GLY
166
n
166
GLY
166
A
THR
167
n
167
THR
167
A
ALA
168
n
168
ALA
168
A
HIS
169
n
169
HIS
169
A
ARG
170
n
170
ARG
170
A
ALA
171
n
171
ALA
171
A
HIS
172
n
172
HIS
172
A
SER
173
n
173
SER
173
A
SER
174
n
174
SER
174
A
MET
175
n
175
MET
175
A
VAL
176
n
176
VAL
176
A
GLY
177
n
177
GLY
177
A
VAL
178
n
178
VAL
178
A
ASN
179
n
179
ASN
179
A
LEU
180
n
180
LEU
180
A
PRO
181
n
181
PRO
181
A
LYS
182
n
182
LYS
182
A
LYS
183
n
183
LYS
183
A
ALA
184
n
184
ALA
184
A
GLY
185
n
185
GLY
185
A
GLY
186
n
186
GLY
186
A
PHE
187
n
187
PHE
187
A
LEU
188
n
188
LEU
188
A
MET
189
n
189
MET
189
A
LYS
190
n
190
LYS
190
A
LYS
191
n
191
LYS
191
A
GLU
192
n
192
GLU
192
A
LEU
193
n
193
LEU
193
A
ASN
194
n
194
ASN
194
A
TYR
195
n
195
TYR
195
A
PHE
196
n
196
PHE
196
A
ALA
197
n
197
ALA
197
A
LYS
198
n
198
LYS
198
A
ALA
199
n
199
ALA
199
A
LEU
200
n
200
LEU
200
A
GLU
201
n
201
GLU
201
A
SER
202
n
202
SER
202
A
PRO
203
n
203
PRO
203
A
GLU
204
n
204
GLU
204
A
ARG
205
n
205
ARG
205
A
PRO
206
n
206
PRO
206
A
PHE
207
n
207
PHE
207
A
LEU
208
n
208
LEU
208
A
ALA
209
n
209
ALA
209
A
ILE
210
n
210
ILE
210
A
LEU
211
n
211
LEU
211
A
GLY
212
n
212
GLY
212
A
GLY
213
n
213
GLY
213
A
ALA
214
n
214
ALA
214
A
LYS
215
n
215
LYS
215
A
VAL
216
n
216
VAL
216
A
ALA
217
n
217
ALA
217
A
ASP
218
n
218
ASP
218
A
LYS
219
n
219
LYS
219
A
ILE
220
n
220
ILE
220
A
GLN
221
n
221
GLN
221
A
LEU
222
n
222
LEU
222
A
ILE
223
n
223
ILE
223
A
ASN
224
n
224
ASN
224
A
ASN
225
n
225
ASN
225
A
MET
226
n
226
MET
226
A
LEU
227
n
227
LEU
227
A
ASP
228
n
228
ASP
228
A
LYS
229
n
229
LYS
229
A
VAL
230
n
230
VAL
230
A
ASN
231
n
231
ASN
231
A
GLU
232
n
232
GLU
232
A
MET
233
n
233
MET
233
A
ILE
234
n
234
ILE
234
A
ILE
235
n
235
ILE
235
A
GLY
236
n
236
GLY
236
A
GLY
237
n
237
GLY
237
A
GLY
238
n
238
GLY
238
A
MET
239
n
239
MET
239
A
ALA
240
n
240
ALA
240
A
PHE
241
n
241
PHE
241
A
THR
242
n
242
THR
242
A
PHE
243
n
243
PHE
243
A
LEU
244
n
244
LEU
244
A
LYS
245
n
245
LYS
245
A
VAL
246
n
246
VAL
246
A
LEU
247
n
247
LEU
247
A
ASN
248
n
248
ASN
248
A
ASN
249
n
249
ASN
249
A
MET
250
n
250
MET
250
A
GLU
251
n
251
GLU
251
A
ILE
252
n
252
ILE
252
A
GLY
253
n
253
GLY
253
A
THR
254
n
254
THR
254
A
SER
255
n
255
SER
255
A
LEU
256
n
256
LEU
256
A
PHE
257
n
257
PHE
257
A
ASP
258
n
258
ASP
258
A
GLU
259
n
259
GLU
259
A
GLU
260
n
260
GLU
260
A
GLY
261
n
261
GLY
261
A
ALA
262
n
262
ALA
262
A
LYS
263
n
263
LYS
263
A
ILE
264
n
264
ILE
264
A
VAL
265
n
265
VAL
265
A
LYS
266
n
266
LYS
266
A
ASN
267
n
267
ASN
267
A
LEU
268
n
268
LEU
268
A
MET
269
n
269
MET
269
A
SER
270
n
270
SER
270
A
LYS
271
n
271
LYS
271
A
ALA
272
n
272
ALA
272
A
GLU
273
n
273
GLU
273
A
LYS
274
n
274
LYS
274
A
ASN
275
n
275
ASN
275
A
GLY
276
n
276
GLY
276
A
VAL
277
n
277
VAL
277
A
LYS
278
n
278
LYS
278
A
ILE
279
n
279
ILE
279
A
THR
280
n
280
THR
280
A
LEU
281
n
281
LEU
281
A
PRO
282
n
282
PRO
282
A
VAL
283
n
283
VAL
283
A
ASP
284
n
284
ASP
284
A
PHE
285
n
285
PHE
285
A
VAL
286
n
286
VAL
286
A
THR
287
n
287
THR
287
A
ALA
288
n
288
ALA
288
A
ASP
289
n
289
ASP
289
A
LYS
290
n
290
LYS
290
A
PHE
291
n
291
PHE
291
A
ASP
292
n
292
ASP
292
A
GLU
293
n
293
GLU
293
A
HIS
294
n
294
HIS
294
A
ALA
295
n
295
ALA
295
A
LYS
296
n
296
LYS
296
A
THR
297
n
297
THR
297
A
GLY
298
n
298
GLY
298
A
GLN
299
n
299
GLN
299
A
ALA
300
n
300
ALA
300
A
THR
301
n
301
THR
301
A
VAL
302
n
302
VAL
302
A
ALA
303
n
303
ALA
303
A
SER
304
n
304
SER
304
A
GLY
305
n
305
GLY
305
A
ILE
306
n
306
ILE
306
A
PRO
307
n
307
PRO
307
A
ALA
308
n
308
ALA
308
A
GLY
309
n
309
GLY
309
A
TRP
310
n
310
TRP
310
A
MET
311
n
311
MET
311
A
GLY
312
n
312
GLY
312
A
LEU
313
n
313
LEU
313
A
ASP
314
n
314
ASP
314
A
CYS
315
n
315
CYS
315
A
GLY
316
n
316
GLY
316
A
PRO
317
n
317
PRO
317
A
GLU
318
n
318
GLU
318
A
SER
319
n
319
SER
319
A
SER
320
n
320
SER
320
A
LYS
321
n
321
LYS
321
A
LYS
322
n
322
LYS
322
A
TYR
323
n
323
TYR
323
A
SER
324
n
324
SER
324
A
GLU
325
n
325
GLU
325
A
ALA
326
n
326
ALA
326
A
VAL
327
n
327
VAL
327
A
ALA
328
n
328
ALA
328
A
ARG
329
n
329
ARG
329
A
ALA
330
n
330
ALA
330
A
LYS
331
n
331
LYS
331
A
GLN
332
n
332
GLN
332
A
ILE
333
n
333
ILE
333
A
VAL
334
n
334
VAL
334
A
TRP
335
n
335
TRP
335
A
ASN
336
n
336
ASN
336
A
GLY
337
n
337
GLY
337
A
PRO
338
n
338
PRO
338
A
VAL
339
n
339
VAL
339
A
GLY
340
n
340
GLY
340
A
VAL
341
n
341
VAL
341
A
PHE
342
n
342
PHE
342
A
GLU
343
n
343
GLU
343
A
TRP
344
n
344
TRP
344
A
GLU
345
n
345
GLU
345
A
ALA
346
n
346
ALA
346
A
PHE
347
n
347
PHE
347
A
ALA
348
n
348
ALA
348
A
GLN
349
n
349
GLN
349
A
GLY
350
n
350
GLY
350
A
THR
351
n
351
THR
351
A
LYS
352
n
352
LYS
352
A
ALA
353
n
353
ALA
353
A
LEU
354
n
354
LEU
354
A
MET
355
n
355
MET
355
A
ASP
356
n
356
ASP
356
A
GLU
357
n
357
GLU
357
A
VAL
358
n
358
VAL
358
A
VAL
359
n
359
VAL
359
A
LYS
360
n
360
LYS
360
A
ALA
361
n
361
ALA
361
A
THR
362
n
362
THR
362
A
SER
363
n
363
SER
363
A
ARG
364
n
364
ARG
364
A
GLY
365
n
365
GLY
365
A
CYS
366
n
366
CYS
366
A
ILE
367
n
367
ILE
367
A
THR
368
n
368
THR
368
A
ILE
369
n
369
ILE
369
A
ILE
370
n
370
ILE
370
A
GLY
371
n
371
GLY
371
A
GLY
372
n
372
GLY
372
A
GLY
373
n
373
GLY
373
A
ASP
374
n
374
ASP
374
A
THR
375
n
375
THR
375
A
ALA
376
n
376
ALA
376
A
THR
377
n
377
THR
377
A
CYS
378
n
378
CYS
378
A
CYS
379
n
379
CYS
379
A
ALA
380
n
380
ALA
380
A
LYS
381
n
381
LYS
381
A
TRP
382
n
382
TRP
382
A
ASN
383
n
383
ASN
383
A
THR
384
n
384
THR
384
A
GLU
385
n
385
GLU
385
A
ASP
386
n
386
ASP
386
A
LYS
387
n
387
LYS
387
A
VAL
388
n
388
VAL
388
A
SER
389
n
389
SER
389
A
HIS
390
n
390
HIS
390
A
VAL
391
n
391
VAL
391
A
SER
392
n
392
SER
392
A
THR
393
n
393
THR
393
A
GLY
394
n
394
GLY
394
A
GLY
395
n
395
GLY
395
A
GLY
396
n
396
GLY
396
A
ALA
397
n
397
ALA
397
A
SER
398
n
398
SER
398
A
LEU
399
n
399
LEU
399
A
GLU
400
n
400
GLU
400
A
LEU
401
n
401
LEU
401
A
LEU
402
n
402
LEU
402
A
GLU
403
n
403
GLU
403
A
GLY
404
n
404
GLY
404
A
LYS
405
n
405
LYS
405
A
VAL
406
n
406
VAL
406
A
LEU
407
n
407
LEU
407
A
PRO
408
n
408
PRO
408
A
GLY
409
n
409
GLY
409
A
VAL
410
n
410
VAL
410
A
ASP
411
n
411
ASP
411
A
ALA
412
n
412
ALA
412
A
LEU
413
n
413
LEU
413
A
SER
414
n
414
SER
414
A
ASN
415
n
415
ASN
415
A
VAL
416
n
416
VAL
416
A
author_defined_assembly
1
monomeric
A
ASP
218
A
OD1
ASP
218
1_555
A
MG
518
B
MG
MG
1_555
A
ACP
418
D
O2B
ACP
1_555
173.5
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LEU
93
A
N
LEU
93
A
O
VAL
115
A
O
VAL
115
A
O
ILE
116
A
O
ILE
116
A
N
LEU
59
A
N
LEU
59
A
O
VAL
58
A
O
VAL
58
A
N
VAL
18
A
N
VAL
18
A
N
VAL
19
A
N
VAL
19
A
O
VAL
161
A
O
VAL
161
A
N
TYR
160
A
N
TYR
160
A
O
ALA
184
A
O
ALA
184
A
N
GLY
131
A
N
GLY
131
A
O
VAL
139
A
O
VAL
139
A
O
THR
280
A
O
THR
280
A
N
MET
233
A
N
MET
233
A
O
ILE
234
A
O
ILE
234
A
N
LEU
211
A
N
LEU
211
A
N
ILE
210
A
N
ILE
210
A
O
VAL
334
A
O
VAL
334
A
N
ILE
333
A
N
ILE
333
A
O
ILE
367
A
O
ILE
367
A
N
ILE
370
A
N
ILE
370
A
O
HIS
390
A
O
HIS
390
A
O
ALA
300
A
O
ALA
300
A
N
PHE
285
A
N
PHE
285
A
N
VAL
286
A
N
VAL
286
A
O
ASP
314
A
O
ASP
314
1
A
CG
LYS
29
A
CG
LYS
29
1
Y
1
A
CD
LYS
29
A
CD
LYS
29
1
Y
1
A
CE
LYS
29
A
CE
LYS
29
1
Y
1
A
NZ
LYS
29
A
NZ
LYS
29
1
Y
1
A
CB
ASN
30
A
CB
ASN
30
1
Y
1
A
CG
ASN
30
A
CG
ASN
30
1
Y
1
A
OD1
ASN
30
A
OD1
ASN
30
1
Y
1
A
ND2
ASN
30
A
ND2
ASN
30
1
Y
1
A
CG
ASN
31
A
CG
ASN
31
1
Y
1
A
OD1
ASN
31
A
OD1
ASN
31
1
Y
1
A
ND2
ASN
31
A
ND2
ASN
31
1
Y
1
A
CB
GLN
32
A
CB
GLN
32
1
Y
1
A
CG
GLN
32
A
CG
GLN
32
1
Y
1
A
CD
GLN
32
A
CD
GLN
32
1
Y
1
A
OE1
GLN
32
A
OE1
GLN
32
1
Y
1
A
NE2
GLN
32
A
NE2
GLN
32
1
Y
1
A
CG
GLN
37
A
CG
GLN
37
1
Y
1
A
CD
GLN
37
A
CD
GLN
37
1
Y
1
A
OE1
GLN
37
A
OE1
GLN
37
1
Y
1
A
NE2
GLN
37
A
NE2
GLN
37
1
Y
1
A
CG
LYS
47
A
CG
LYS
47
1
Y
1
A
CD
LYS
47
A
CD
LYS
47
1
Y
1
A
CE
LYS
47
A
CE
LYS
47
1
Y
1
A
NZ
LYS
47
A
NZ
LYS
47
1
Y
1
A
CB
LYS
74
A
CB
LYS
74
1
Y
1
A
CG
LYS
74
A
CG
LYS
74
1
Y
1
A
CD
LYS
74
A
CD
LYS
74
1
Y
1
A
CE
LYS
74
A
CE
LYS
74
1
Y
1
A
NZ
LYS
74
A
NZ
LYS
74
1
Y
1
A
CD
LYS
85
A
CD
LYS
85
1
Y
1
A
CE
LYS
85
A
CE
LYS
85
1
Y
1
A
NZ
LYS
85
A
NZ
LYS
85
1
Y
1
A
CG
LYS
96
A
CG
LYS
96
1
Y
1
A
CD
LYS
96
A
CD
LYS
96
1
Y
1
A
CE
LYS
96
A
CE
LYS
96
1
Y
1
A
NZ
LYS
96
A
NZ
LYS
96
1
Y
1
A
CB
LYS
130
A
CB
LYS
130
1
Y
1
A
CG
LYS
130
A
CG
LYS
130
1
Y
1
A
CD
LYS
130
A
CD
LYS
130
1
Y
1
A
CE
LYS
130
A
CE
LYS
130
1
Y
1
A
NZ
LYS
130
A
NZ
LYS
130
1
Y
1
A
CG
LYS
138
A
CG
LYS
138
1
Y
1
A
CD
LYS
138
A
CD
LYS
138
1
Y
1
A
CE
LYS
138
A
CE
LYS
138
1
Y
1
A
NZ
LYS
138
A
NZ
LYS
138
1
Y
1
A
CG
LYS
140
A
CG
LYS
140
1
Y
1
A
CD
LYS
140
A
CD
LYS
140
1
Y
1
A
CE
LYS
140
A
CE
LYS
140
1
Y
1
A
NZ
LYS
140
A
NZ
LYS
140
1
Y
1
A
CG
LYS
147
A
CG
LYS
147
1
Y
1
A
CD
LYS
147
A
CD
LYS
147
1
Y
1
A
CE
LYS
147
A
CE
LYS
147
1
Y
1
A
NZ
LYS
147
A
NZ
LYS
147
1
Y
1
A
OG1
THR
148
A
OG1
THR
148
1
Y
1
A
CG2
THR
148
A
CG2
THR
148
1
Y
1
A
CB
ASN
179
A
CB
ASN
179
1
Y
1
A
CG
ASN
179
A
CG
ASN
179
1
Y
1
A
OD1
ASN
179
A
OD1
ASN
179
1
Y
1
A
ND2
ASN
179
A
ND2
ASN
179
1
Y
1
A
CD
LYS
215
A
CD
LYS
215
1
Y
1
A
CE
LYS
215
A
CE
LYS
215
1
Y
1
A
NZ
LYS
215
A
NZ
LYS
215
1
Y
1
A
CG
GLU
273
A
CG
GLU
273
1
Y
1
A
CD
GLU
273
A
CD
GLU
273
1
Y
1
A
OE1
GLU
273
A
OE1
GLU
273
1
Y
1
A
OE2
GLU
273
A
OE2
GLU
273
1
Y
1
A
CG
LYS
274
A
CG
LYS
274
1
Y
1
A
CD
LYS
274
A
CD
LYS
274
1
Y
1
A
CE
LYS
274
A
CE
LYS
274
1
Y
1
A
NZ
LYS
274
A
NZ
LYS
274
1
Y
1
A
CD
LYS
352
A
CD
LYS
352
1
Y
1
A
CE
LYS
352
A
CE
LYS
352
1
Y
1
A
NZ
LYS
352
A
NZ
LYS
352
1
Y
1
A
CG
ARG
364
A
CG
ARG
364
1
Y
1
A
CD
ARG
364
A
CD
ARG
364
1
Y
1
A
NE
ARG
364
A
NE
ARG
364
1
Y
1
A
CZ
ARG
364
A
CZ
ARG
364
1
Y
1
A
NH1
ARG
364
A
NH1
ARG
364
1
Y
1
A
NH2
ARG
364
A
NH2
ARG
364
1
Y
1
A
CB
LYS
381
A
CB
LYS
381
1
Y
1
A
CG
LYS
381
A
CG
LYS
381
1
Y
1
A
CD
LYS
381
A
CD
LYS
381
1
Y
1
A
CE
LYS
381
A
CE
LYS
381
1
Y
1
A
NZ
LYS
381
A
NZ
LYS
381
1
Y
1
A
ASN
30
-168.48
-19.92
1
A
ASN
31
178.62
1.73
1
A
ASN
120
-31.57
111.89
1
A
ALA
171
-97.24
53.40
1
A
ALA
199
-99.18
39.69
1
A
LEU
200
-159.32
-19.71
1
A
SER
202
-158.82
78.63
24.16
-5.075
0.000
0.880
-5.437
0.000
-4.459
0.2524000
0.1730000
0.2476000
0.2000000
2.50
20.0
609
11956
10666
RANDOM
1
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
pig muscle PGK ternary complex with MnAMP-PNP and 3-PG
May et al., Proteins, 24:292-303, 1996)
Engh & Huber
2.50
20.0
81
3156
43
0
3032
0.004
0.842
27.050
0.500
0.3722000
0.1249000
2.61
36
790
48.08
2.50
20.0
1KF0
12274
12274
0.0
0.0
0.0810000
1
95.3
0.2520000
2.50
2.60
79.3
phasing
AMoRE
refinement
X-PLOR
3.851
data reduction
DENZO
data scaling
SCALEPACK
Crystal Structure of Pig Muscle Phosphoglycerate Kinase Ternary Complex with AMP-PCP and 3PG
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
A
THR
7
A
THR
7
HELX_P
A
LEU
11
A
LEU
11
5
1
5
A
ASN
36
A
ASN
36
HELX_P
A
ALA
41
A
ALA
41
1
2
6
A
ALA
42
A
ALA
42
HELX_P
A
ASP
52
A
ASP
52
1
3
11
A
LEU
77
A
LEU
77
HELX_P
A
GLY
89
A
GLY
89
1
4
13
A
GLY
100
A
GLY
100
HELX_P
A
CYS
107
A
CYS
107
1
5
8
A
ASN
120
A
ASN
120
HELX_P
A
HIS
124
A
HIS
124
5
6
5
A
GLU
142
A
GLU
142
HELX_P
A
LEU
156
A
LEU
156
1
7
15
A
ALA
164
A
ALA
164
HELX_P
A
ALA
168
A
ALA
168
5
8
5
A
HIS
172
A
HIS
172
HELX_P
A
GLY
177
A
GLY
177
1
9
6
A
GLY
186
A
GLY
186
HELX_P
A
ALA
199
A
ALA
199
1
10
14
A
VAL
216
A
VAL
216
HELX_P
A
ASP
218
A
ASP
218
5
11
3
A
LYS
219
A
LYS
219
HELX_P
A
LEU
227
A
LEU
227
1
12
9
A
GLY
237
A
GLY
237
HELX_P
A
ASN
249
A
ASN
249
1
13
13
A
ASP
258
A
ASP
258
HELX_P
A
LYS
263
A
LYS
263
1
14
6
A
ILE
264
A
ILE
264
HELX_P
A
GLY
276
A
GLY
276
1
15
13
A
GLY
316
A
GLY
316
HELX_P
A
ALA
330
A
ALA
330
1
16
15
A
TRP
344
A
TRP
344
HELX_P
A
PHE
347
A
PHE
347
5
17
4
A
ALA
348
A
ALA
348
HELX_P
A
SER
363
A
SER
363
1
18
16
A
GLY
373
A
GLY
373
HELX_P
A
LYS
381
A
LYS
381
1
19
9
A
GLY
394
A
GLY
394
HELX_P
A
GLU
403
A
GLU
403
1
20
10
A
LEU
407
A
LEU
407
HELX_P
A
ALA
412
A
ALA
412
1
21
6
metalc
2.251
A
ASP
218
A
OD1
ASP
218
1_555
A
MG
518
B
MG
MG
1_555
metalc
2.233
A
ACP
418
D
O2B
ACP
1_555
A
MG
518
B
MG
MG
1_555
TRANSFERASE
ATP analogue, TRANSFERASE
A
ARG
205
A
ARG
205
1
A
PRO
206
A
PRO
206
-0.07
PGK1_PIG
UNP
1
1
Q7SIB7
1
416
1KF0
1
416
Q7SIB7
A
1
1
416
6
2
6
3
parallel
parallel
parallel
parallel
parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
A
LEU
93
A
LEU
93
A
PHE
94
A
PHE
94
A
SER
114
A
SER
114
A
LEU
117
A
LEU
117
A
SER
56
A
SER
56
A
MET
60
A
MET
60
A
ARG
17
A
ARG
17
A
ARG
21
A
ARG
21
A
VAL
159
A
VAL
159
A
ASN
162
A
ASN
162
A
LYS
183
A
LYS
183
A
GLY
185
A
GLY
185
A
LYS
130
A
LYS
130
A
LYS
132
A
LYS
132
A
LYS
138
A
LYS
138
A
LYS
140
A
LYS
140
A
LYS
278
A
LYS
278
A
THR
280
A
THR
280
A
GLU
232
A
GLU
232
A
ILE
235
A
ILE
235
A
PHE
207
A
PHE
207
A
LEU
211
A
LEU
211
A
GLN
332
A
GLN
332
A
ASN
336
A
ASN
336
A
ILE
367
A
ILE
367
A
ILE
370
A
ILE
370
A
HIS
390
A
HIS
390
A
VAL
391
A
VAL
391
A
THR
297
A
THR
297
A
THR
301
A
THR
301
A
ASP
284
A
ASP
284
A
ALA
288
A
ALA
288
A
MET
311
A
MET
311
A
CYS
315
A
CYS
315
BINDING SITE FOR RESIDUE MG A 518
A
MG
518
Software
2
BINDING SITE FOR RESIDUE 3PG A 417
A
3PG
417
Software
11
BINDING SITE FOR RESIDUE ACP A 418
A
ACP
418
Software
16
A
ASP
218
A
ASP
218
2
1_555
A
ACP
418
D
ACP
2
1_555
A
ASP
23
A
ASP
23
11
1_555
A
ASN
25
A
ASN
25
11
1_555
A
ARG
38
A
ARG
38
11
1_555
A
HIS
62
A
HIS
62
11
1_555
A
ARG
65
A
ARG
65
11
1_555
A
ARG
122
A
ARG
122
11
1_555
A
GLY
166
A
GLY
166
11
1_555
A
ARG
170
A
ARG
170
11
1_555
A
HOH
451
E
HOH
11
1_555
A
HOH
476
E
HOH
11
1_555
A
HOH
500
E
HOH
11
1_555
A
GLY
213
A
GLY
213
16
1_555
A
ALA
214
A
ALA
214
16
1_555
A
LYS
215
A
LYS
215
16
1_555
A
LYS
219
A
LYS
219
16
1_555
A
GLY
237
A
GLY
237
16
1_555
A
GLY
238
A
GLY
238
16
1_555
A
PHE
241
A
PHE
241
16
1_555
A
GLY
312
A
GLY
312
16
1_555
A
GLY
340
A
GLY
340
16
1_555
A
VAL
341
A
VAL
341
16
1_555
A
GLU
343
A
GLU
343
16
1_555
A
ASP
374
A
ASP
374
16
1_555
A
HOH
426
E
HOH
16
1_555
A
HOH
467
E
HOH
16
1_555
A
HOH
506
E
HOH
16
1_555
A
MG
518
B
MG
16
1_555
4
P 1 21 1