1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Van't Slot, K.A. Van den Burg, H.A. Kloks, C.P. Hilbers, C.W. Knogge, W. Papavoine, C.H. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US J.Biol.Chem. JBCHA3 0071 0021-9258 278 45730 45736 10.1074/jbc.M308304200 12944393 Solution Structure of the Plant Disease Resistance-triggering Protein NIP1 from the Fungus Rhynchosporium secalis Shows a Novel beta-Sheet Fold. 2003 10.2210/pdb1kg1/pdb pdb_00001kg1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 SINGLE WAVELENGTH M 1 1.0 6451.364 Necrosis Inducing Protein 1 1 man polymer NIP1 no no DRCRYTLCCDGALKAVSACLHESESCLVPGDCCRGKSRLTLCSYGEGGNGFQCPTGYRQC DRCRYTLCCDGALKAVSACLHESESCLVPGDCCRGKSRLTLCSYGEGGNGFQCPTGYRQC A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n leaf blotch of barley Rhynchosporium Escherichia sample Nip1 38038 Rhynchosporium secalis 562 Escherichia coli AD494 Plasmid pQE30 database_2 pdbx_struct_assembly pdbx_struct_oper_list repository Initial release Version format compliance Version format compliance Database references Derived calculations 1 0 2003-11-11 1 1 2008-04-27 1 2 2011-07-13 1 3 2022-02-23 _database_2.pdbx_DOI _database_2.pdbx_database_accession 5199 contains NIP1 WITH CHEMICAL SHIFT VALUES AND TORSION ANGLES. RCSB Y PDBJ 2001-11-26 REL REL Disulfide bond pattern was determined independently target function 100 25 3D_15N-separated_NOESY HNHA HNHB 2D NOESY 2D NOESY DQF-COSY HMQC-NOESY-HMQC hmqc-noesy-hmqc 2D HMQC-J DQF-COSY 6.0 ambient 298 K The structures are besed on a total of 785 restraints: 740 NOE restraints and 45, 40 torsion angle restraints and 5 disulfide bonds torsion angle dynamics 1 closest to the average 2.0mM NIP1, 97% 15N incorporation H2O 2.0mM NIP1, unlabeled H2O 2.0mM NIP1, unlabeled D2O Guntert structure solution DYANA 1.5 Delaglio processing NMRPipe version 1.8 Rev 2001.030.21.27 Bartels data analysis XEASY 1.3.13 Guntert refinement DYANA 1.5 600 Bruker DMX 500 Varian INOVA 800 Varian INOVA ASP 1 n 1 ASP 1 A ARG 2 n 2 ARG 2 A CYS 3 n 3 CYS 3 A ARG 4 n 4 ARG 4 A TYR 5 n 5 TYR 5 A THR 6 n 6 THR 6 A LEU 7 n 7 LEU 7 A CYS 8 n 8 CYS 8 A CYS 9 n 9 CYS 9 A ASP 10 n 10 ASP 10 A GLY 11 n 11 GLY 11 A ALA 12 n 12 ALA 12 A LEU 13 n 13 LEU 13 A LYS 14 n 14 LYS 14 A ALA 15 n 15 ALA 15 A VAL 16 n 16 VAL 16 A SER 17 n 17 SER 17 A ALA 18 n 18 ALA 18 A CYS 19 n 19 CYS 19 A LEU 20 n 20 LEU 20 A HIS 21 n 21 HIS 21 A GLU 22 n 22 GLU 22 A SER 23 n 23 SER 23 A GLU 24 n 24 GLU 24 A SER 25 n 25 SER 25 A CYS 26 n 26 CYS 26 A LEU 27 n 27 LEU 27 A VAL 28 n 28 VAL 28 A PRO 29 n 29 PRO 29 A GLY 30 n 30 GLY 30 A ASP 31 n 31 ASP 31 A CYS 32 n 32 CYS 32 A CYS 33 n 33 CYS 33 A ARG 34 n 34 ARG 34 A GLY 35 n 35 GLY 35 A LYS 36 n 36 LYS 36 A SER 37 n 37 SER 37 A ARG 38 n 38 ARG 38 A LEU 39 n 39 LEU 39 A THR 40 n 40 THR 40 A LEU 41 n 41 LEU 41 A CYS 42 n 42 CYS 42 A SER 43 n 43 SER 43 A TYR 44 n 44 TYR 44 A GLY 45 n 45 GLY 45 A GLU 46 n 46 GLU 46 A GLY 47 n 47 GLY 47 A GLY 48 n 48 GLY 48 A ASN 49 n 49 ASN 49 A GLY 50 n 50 GLY 50 A PHE 51 n 51 PHE 51 A GLN 52 n 52 GLN 52 A CYS 53 n 53 CYS 53 A PRO 54 n 54 PRO 54 A THR 55 n 55 THR 55 A GLY 56 n 56 GLY 56 A TYR 57 n 57 TYR 57 A ARG 58 n 58 ARG 58 A GLN 59 n 59 GLN 59 A CYS 60 n 60 CYS 60 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N THR 6 A N THR 6 A O ALA 18 A O ALA 18 A O SER 37 A O SER 37 A N ARG 34 A N ARG 34 A N CYS 33 A N CYS 33 A O ARG 58 A O ARG 58 3 A A O HE TYR ARG 57 58 1.50 3 A A O H SER GLN 43 52 1.57 4 A A O H SER GLN 43 52 1.59 5 A A HG O SER GLN 43 52 1.49 5 A A O H SER GLN 43 52 1.55 12 A A H O ASP LYS 10 14 1.59 16 A A H O GLY GLY 45 50 1.59 17 A A O H HIS GLU 21 24 1.59 1 A TYR 5 -48.20 109.95 1 A ALA 12 -150.77 79.01 1 A LEU 13 173.19 -84.02 1 A LYS 14 174.59 132.58 1 A LEU 27 -67.12 93.07 1 A GLU 46 -38.68 125.68 2 A CYS 3 59.69 158.70 2 A TYR 5 -38.84 99.98 2 A ALA 12 -151.77 81.10 2 A LEU 13 176.34 -94.11 2 A LYS 14 -175.40 121.97 2 A LEU 27 -64.81 77.36 2 A PRO 29 -75.05 -168.09 2 A LYS 36 -148.42 29.19 2 A GLU 46 59.64 151.05 2 A GLN 59 -35.14 125.18 3 A CYS 3 86.76 137.55 3 A TYR 5 -36.08 98.10 3 A ALA 12 -150.54 74.28 3 A LEU 13 177.56 -92.72 3 A LYS 14 179.50 117.17 3 A ALA 15 -36.46 125.66 3 A PRO 29 -75.10 -169.53 3 A GLN 52 -119.58 -169.39 4 A CYS 3 -43.84 161.40 4 A ARG 4 -101.77 79.55 4 A ALA 12 -150.78 72.85 4 A LEU 13 175.02 -89.58 4 A LYS 14 177.70 133.07 4 A ALA 15 -39.32 129.68 4 A LEU 27 -60.46 89.85 4 A LYS 36 -145.01 27.89 4 A ASN 49 -150.32 87.96 4 A GLN 59 -37.62 126.83 5 A CYS 3 178.82 153.32 5 A ALA 12 -152.90 72.32 5 A LEU 13 -178.86 -99.53 5 A LEU 27 -60.84 87.58 5 A PRO 29 -75.02 -169.15 5 A GLU 46 -36.63 139.59 5 A GLN 59 -35.78 140.56 6 A CYS 3 76.72 157.83 6 A ALA 12 -89.74 44.72 6 A LEU 13 31.90 54.28 6 A LYS 14 -152.12 78.90 6 A LEU 27 -60.28 90.54 6 A SER 43 -160.50 116.01 6 A ASN 49 -113.40 79.85 6 A GLN 59 -38.69 143.62 7 A ALA 12 -152.73 76.74 7 A LEU 13 177.60 -95.23 7 A LEU 27 -62.71 79.27 7 A LYS 36 -148.47 29.72 7 A SER 43 -160.62 103.31 7 A ASN 49 -114.75 62.95 7 A GLN 59 -35.48 124.08 8 A TYR 5 -36.49 105.34 8 A ASP 10 -96.03 30.59 8 A ALA 12 -122.28 -135.07 8 A GLU 46 59.16 152.64 8 A GLN 59 -37.24 141.68 9 A TYR 5 -36.27 97.08 9 A ALA 12 -150.00 47.49 9 A LEU 13 157.04 -83.04 9 A LEU 27 -61.94 82.17 9 A ASN 49 -89.54 43.90 9 A PHE 51 -43.31 150.24 9 A GLN 59 -36.72 126.61 10 A ARG 2 167.51 163.75 10 A ALA 12 -152.71 68.66 10 A LEU 13 -179.97 -96.53 10 A LEU 27 -65.54 92.06 10 A LYS 36 -140.59 24.28 10 A GLN 59 -37.18 132.26 11 A ARG 2 -39.48 159.97 11 A TYR 5 -47.77 107.14 11 A ALA 12 -117.08 -131.48 11 A PRO 29 -74.94 -168.28 11 A SER 43 -160.32 95.56 11 A GLU 46 52.29 109.22 11 A ASN 49 -150.85 73.55 11 A GLN 52 -150.52 75.47 11 A CYS 53 -47.60 151.48 11 A GLN 59 -34.84 142.23 12 A ARG 2 58.13 158.96 12 A ARG 4 -88.46 -144.15 12 A TYR 5 -177.68 114.33 12 A ALA 12 -141.54 44.35 12 A LEU 13 79.57 -53.91 12 A LYS 14 -38.33 144.00 12 A LEU 27 -65.90 89.37 12 A PRO 29 -75.07 -169.57 12 A SER 43 -155.00 88.99 12 A GLN 59 -36.75 126.05 13 A CYS 3 61.66 165.12 13 A ARG 4 -106.30 61.72 13 A TYR 5 -35.81 125.88 13 A ALA 12 -150.95 83.59 13 A LEU 13 165.69 -88.34 13 A LYS 14 179.10 133.91 13 A SER 23 -78.82 -77.85 13 A GLU 24 -35.96 153.10 14 A ARG 4 -89.45 -146.23 14 A TYR 5 -178.15 106.06 14 A ALA 12 -150.60 70.28 14 A LEU 13 177.45 -93.38 14 A LYS 14 -178.06 132.88 14 A LEU 27 -68.90 76.66 14 A PRO 29 -75.00 -169.46 14 A PHE 51 -36.62 151.37 14 A GLN 59 -36.79 140.19 15 A ARG 2 57.70 158.40 15 A CYS 3 164.13 168.57 15 A ASP 10 -100.14 42.32 15 A ALA 12 -123.85 -133.96 15 A LYS 14 -50.30 101.04 15 A LEU 27 -58.86 84.37 15 A SER 43 -161.51 99.53 15 A CYS 53 -45.58 153.97 15 A GLN 59 -39.32 127.69 16 A CYS 3 65.84 135.84 16 A ALA 12 -151.73 88.37 16 A LEU 13 169.01 -89.13 16 A LYS 14 179.60 123.90 16 A ALA 15 -37.04 119.21 16 A SER 23 -79.55 -78.06 16 A GLU 24 -38.36 151.23 16 A LEU 27 -69.10 91.13 16 A PRO 29 -74.88 -168.61 16 A ASN 49 -146.44 55.90 16 A GLN 59 -37.59 127.27 17 A CYS 3 80.32 157.98 17 A ALA 12 -150.60 71.17 17 A LEU 13 173.35 -91.04 17 A GLU 24 -33.77 142.10 17 A GLU 46 -37.35 133.65 17 A GLN 59 -37.12 126.50 18 A ARG 4 -101.32 66.54 18 A TYR 5 -36.91 118.53 18 A LEU 13 153.85 -24.67 18 A LYS 14 96.84 135.40 18 A ALA 15 -37.56 117.66 18 A GLU 46 -38.42 154.05 18 A ASN 49 -142.30 -154.89 18 A GLN 59 -36.95 137.43 19 A CYS 3 173.94 150.75 19 A ALA 12 -151.98 60.87 19 A LEU 13 179.92 -100.05 19 A LEU 27 -64.93 75.31 19 A PRO 29 -75.01 -169.52 19 A SER 43 -160.71 115.36 20 A ARG 4 -103.86 77.78 20 A ALA 12 -127.49 -126.87 20 A LYS 14 177.60 176.63 20 A LEU 27 -63.49 88.47 20 A PRO 29 -75.03 -167.80 20 A SER 43 -160.16 92.88 20 A GLU 46 59.60 151.11 20 A ASN 49 -135.60 -154.22 20 A GLN 59 -35.39 136.01 21 A CYS 3 162.85 147.79 21 A ARG 4 -102.42 69.67 21 A ALA 12 -103.13 -129.87 21 A LYS 14 172.03 -169.37 21 A LYS 36 -140.60 24.43 21 A GLN 59 -37.56 130.60 22 A CYS 3 63.22 158.92 22 A ALA 12 -145.16 45.92 22 A LEU 13 71.09 -54.48 22 A LYS 14 -38.46 105.39 22 A LEU 27 -66.91 93.20 22 A PRO 29 -75.06 -169.60 22 A LYS 36 -145.20 26.07 22 A SER 43 -160.13 109.77 22 A ASN 49 -90.24 45.43 22 A GLN 59 -37.34 131.42 23 A CYS 3 -41.54 157.78 23 A ALA 12 -152.85 67.61 23 A LEU 13 -178.90 -96.39 23 A LEU 27 -63.34 93.65 23 A PRO 29 -74.95 -168.50 23 A LYS 36 -141.09 24.09 23 A ASN 49 -91.18 39.38 23 A GLN 52 -141.83 -157.67 23 A CYS 53 179.77 171.85 23 A GLN 59 -33.70 137.45 24 A ARG 2 -47.76 169.17 24 A CYS 3 -41.58 158.39 24 A TYR 5 -36.26 122.27 24 A ALA 12 -151.39 84.30 24 A LEU 13 173.33 -91.75 24 A LYS 14 -177.10 122.56 24 A ALA 15 -39.09 117.76 24 A PRO 29 -75.04 -169.70 24 A LYS 36 -146.27 27.91 24 A GLN 59 -36.83 128.71 25 A CYS 3 68.82 154.33 25 A ALA 12 -119.39 -131.54 25 A LEU 27 -65.78 73.99 25 A SER 43 -160.32 115.86 25 A GLU 46 59.84 10.50 25 A GLN 59 -36.24 141.58 NMR structure of the NIP1 elicitor protein from Rhynchosporium secalis 1 N N disulf 1.983 A CYS 3 A SG CYS 3 1_555 A CYS 19 A SG CYS 19 1_555 disulf 1.963 A CYS 8 A SG CYS 8 1_555 A CYS 26 A SG CYS 26 1_555 disulf 1.959 A CYS 9 A SG CYS 9 1_555 A CYS 42 A SG CYS 42 1_555 disulf 2.107 A CYS 32 A SG CYS 32 1_555 A CYS 53 A SG CYS 53 1_555 disulf 1.982 A CYS 33 A SG CYS 33 1_555 A CYS 60 A SG CYS 60 1_555 TOXIN antiparalel beta sheets, TOXIN Q02039_RHYSE UNP 1 Q02039 MKFLVLPLSLAFLQIGLVFSTPDRCRYTLCCDGALKAVSACLHESESCLVPGDCCRGKSRLTLCSYGEGGNGFQCPTGYR QC 23 82 1KG1 1 60 Q02039 A 1 1 60 2 3 anti-parallel anti-parallel anti-parallel A ARG 4 A ARG 4 A CYS 8 A CYS 8 A VAL 16 A VAL 16 A LEU 20 A LEU 20 A SER 37 A SER 37 A LEU 41 A LEU 41 A GLY 30 A GLY 30 A ARG 34 A ARG 34 A ARG 58 A ARG 58 A GLN 59 A GLN 59